Agrobacterium tumefaciens Gene List separated by functional category

Replicon code:

1.1 circular chromosome
2.1 linear chromosome
3.1 At plasmid
4.1 Ti plasmid

Similarity Info: refers to the top hit in BLASTP searches

First percentage: aminoacid identity between AtC58 protein (query) and
top BLAST hit (subject)

Second percentage (Q): % of query covered with respect to number of
positions in the alignment. Since gaps may be introduced in the
alignment, this percentage can be higher than 100.

Third percentage (S): % of subject covered. Same observation as
above applies here.

{species/genus}: top blast hit; not always shown.

gene ID Replicon   Similarity Info                 Product (gene name) {Species/Genus}

1.1. AMINO ACID BIOSYNTHESIS/AROMATIC AMINO ACID FAMILY (21 genes)

3461.1  1.1      78 % (Q: 96.3 %/S: 96.5 %)     2-dehydro-3-deoxyphosphoheptonate aldolase (dhs) {Arabidopsis thaliana}
816.1   1.1      72 % (Q: 94.5 %/S: 95.1 %)     3-dehydroquinate dehydratase (aroQ) {Pseudomonas aeruginosa}
2702.1  2.1      65 % (Q: 97.3 %/S: 91.7 %)     3-dehydroquinate dehydratase (aroQ) {Streptomyces coelicolor}
1237.1  2.1      71 % (Q: 99.2 %/S: 95.2 %)     3-dehydroquinate synthase (aroB) {Synechocystis sp}
1630.1  1.1      38 % (Q:102.1 %/S:101.9 %)     3-phosphoshikimate 1-carboxyvinyltransferase (aroA) {Vibrio cholerae}
407.1   1.1      62 % (Q: 98.2 %/S: 99.7 %)     anthranilate phosphoribosyltransferase (trpD) {Bradyrhizobium japonicum}
3216.1  1.1      83 % (Q:100.0 %/S:100.0 %)     anthranilate synthase component I and II (trpE(G)) {Sinorhizobium meliloti}
848.1   1.1      75 % (Q: 90.5 %/S: 93.1 %)     chorismate mutase (tyrA) {Streptomyces coelicolor}
1328.1  1.1      77 % (Q:100.0 %/S: 98.4 %)     chorismate synthase (aroC) {Escherichia coli K12}
406.1   1.1      74 % (Q: 97.0 %/S: 97.4 %)     indole-3-glycerol-phosphate synthase (trpC) {Bradyrhizobium japonicum}
1955.1  1.1      64 % (Q: 95.5 %/S: 95.9 %)     N-(5'-phosphoribosyl) anthranilate isomerase (trpF) {Rhodobacter sphaeroides}
833.1   1.1      76 % (Q: 95.1 %/S: 88.9 %)     prephenate dehydratase (pheA) {Deinococcus radiodurans}
1224.1  2.1      79 % (Q: 97.7 %/S: 97.1 %)     prephenate dehydrogenase (tyrC) {Zymomonas mobilis}
2100.1  2.1      66 % (Q: 97.8 %/S:100.1 %)     pyrroloquinoline-quinone-dependent quinate dehydrogenase (xxxX) {Xanthomonas campestris pv . juglandis}
1968.1  1.1      56 % (Q: 96.2 %/S: 98.2 %)     shikimate 5-dehydrogenase (aroE) {Bacillus halodurans}
2701.1  2.1      54 % (Q: 97.6 %/S: 99.3 %)     shikimate 5-dehydrogenase (aroE) {Pseudomonas aeruginosa}
3725.1  2.1      40 % (Q: 97.2 %/S: 97.2 %)     shikimate 5-dehydrogenase (aroE) {Methanococcus jannaschii}
1238.1  2.1      60 % (Q: 95.7 %/S: 76.8 %)     shikimate kinase (aroK) {Vibrio cholerae}
1953.1  1.1      74 % (Q:100.0 %/S: 98.6 %)     tryptophan synthase alpha subunit (trpA) {Azospirillum brasilense}
1954.1  1.1      88 % (Q: 99.5 %/S: 99.5 %)     tryptophan synthase beta subunit (trpB) {Rhizobium etli}
2061.1  1.1      60 % (Q:100.0 %/S: 53.6 %)     usg protein (usg) {Caulobacter crescentus}

1.2. AMINO ACID BIOSYNTHESIS/ASPARTATE FAMILY (39 genes)

2775.1  1.1      79 % (Q:100.0 %/S:100.0 %)     2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase (dapD) {Neisseria meningitidis}
2786.1  1.1      59 % (Q: 93.9 %/S: 91.1 %)     5,10-methylenetetrahydrofolate reductase (metF) {Salmonella typhimurium}
4601.1  2.1      63 % (Q: 99.0 %/S:100.0 %)     5-dehydro-4-deoxyglucarate dehydratase (xxxX) {Pseudomonas putida}
3643.1  2.1      84 % (Q: 99.7 %/S: 94.5 %)     5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase (metE) {Pyrococcus abyssi}
1785.1  1.1      60 % (Q: 99.2 %/S: 99.2 %)     aspartate aminotransferase (aspB) {Thermotoga maritima}
3083.1  2.1      32 % (Q: 94.1 %/S: 89.1 %)     aspartate aminotransferase (aspC) {Methanococcus jannaschii}
951.1   1.1      89 % (Q:100.0 %/S:100.0 %)     aspartate aminotransferase A (aatA) {Sinorhizobium meliloti}
3741.1  2.1      53 % (Q:100.0 %/S:100.3 %)     aspartate aminotransferase A (aatA) {Sinorhizobium meliloti}
4228.1  2.1      83 % (Q: 98.4 %/S:101.7 %)     aspartate kinase, alpha and beta subunit (lysC) {Neisseria meningitidis MC58}
4153.1  2.1      75 % (Q: 96.2 %/S: 99.6 %)     aspartate racemase (xxxX) {Zymomonas mobilis}
4544.1  2.1      53 % (Q:100.0 %/S: 99.6 %)     aspartate racemase (xxxX) {E.coli}
818.1   1.1      62 % (Q: 99.5 %/S:100.8 %)     aspartate transaminase (aspB) {Mycobacterium tuberculosis (strain H37RV)}
3153.1  1.1      91 % (Q:100.0 %/S:100.0 %)     aspartate-semialdehyde dehydrogenase (asd) {Aquifex aeolicus}
3438.1  1.1      66 % (Q: 96.5 %/S:100.0 %)     cystathionine beta lyase (metC) {Zymomonas mobilis}
1216.1  2.1      73 % (Q: 99.8 %/S: 99.8 %)     diaminopimelate decarboxylase (lysA) {Pseudomonas aeruginosa}
3505.1  1.1      38 % (Q: 99.5 %/S: 91.4 %)     diaminopimelate decarboxylase (lysA) {Bacillus circulans}
4363.1  1.1      67 % (Q: 97.6 %/S: 96.3 %)     diaminopimelate epimerase (dapF) {Arabidopsis thaliana}
3613.1  1.1      69 % (Q: 98.9 %/S: 97.8 %)     dihydrodipicolinate reductase (dapB) {Rhizobium meliloti}
1122.1  2.1      70 % (Q: 99.7 %/S: 99.7 %)     dihydrodipicolinate synthase (dapA) {Pseudomonas aeruginosa}
1407.1  1.1      59 % (Q: 97.7 %/S: 99.7 %)     dihydrodipicolinate synthase (dapA) {Zymomonas mobilis}
1543.1  3.1      28 % (Q: 66.3 %/S: 70.7 %)     dihydrodipicolinate synthase (dapA) {Bacillus subtilis}
1545.1  3.1      31 % (Q: 96.8 %/S: 94.4 %)     dihydrodipicolinate synthase (dapA) {Halobacterium sp. NRC-1}
1681.1  1.1      71 % (Q:100.0 %/S:100.3 %)     dihydrodipicolinate synthase (dapA) {Bradyrhizobium japonicum}
1931.1  3.1      64 % (Q: 97.0 %/S: 91.3 %)     dihydrodipicolinate synthase (dapA) {Pseudomonas aeruginosa}
3164.1  1.1      27 % (Q:100.7 %/S:100.3 %)     dihydrodipicolinate synthase (dapA) {Bacillus subtilis}
3352.1  2.1      85 % (Q: 98.1 %/S: 98.4 %)     dihydrodipicolinate synthase (dapA) {Pseudomonas aeruginosa}
3923.1  3.1      34 % (Q: 96.3 %/S: 91.4 %)     dihydrodipicolinate synthase (dapA) {Halobacterium sp. NRC-1}
3826.1  2.1      36 % (Q: 99.0 %/S: 97.7 %)     dihydropicolinate synthase (dapA) {Streptomyces coelicolor A3(2)}
4152.1  2.1      46 % (Q: 99.6 %/S: 95.9 %)     glutamine amidotransferase (xxxX) {Vibrio cholerae}
3444.1  1.1      69 % (Q: 99.8 %/S: 99.5 %)     homoserine dehydrogenase (hom) {Neisseria meningitidis}
866.1   1.1      53 % (Q: 97.1 %/S: 98.4 %)     homoserine O-succinyltransferase (metA) {Thermotoga maritima}
350.1   2.1      63 % (Q: 95.6 %/S: 96.8 %)     L-aspartase (aspA) {Rhizobium etli}
2814.1  1.1      62 % (Q: 98.2 %/S:100.0 %)     methionine synthase (metH) {Pseudomonas aeruginosa}
1372.1  1.1      35 % (Q: 93.8 %/S: 89.7 %)     methylenetetrahydrofolate reductase (metF) {Methylobacterium sp. CM4}
2584.1  1.1      36 % (Q: 82.1 %/S: 81.9 %)     methylenetetrahydrofolate reductase (metF) {Methylobacterium sp. CM4}
1006.1  1.1      84 % (Q:100.0 %/S:100.0 %)     S-adenosylhomocysteine hydrolase (ahcY) {Rhodobacter capsulatus}
840.1   1.1      74 % (Q: 99.4 %/S: 99.8 %)     succinyl-diaminopimelate desuccinylase (dapE) {Deinococcus radiodurans}
2776.1  1.1      75 % (Q: 98.0 %/S: 98.2 %)     succinyl-diaminopimelate desuccinylase (dapE) {Pseudomonas aeruginosa (strain PAO1)}
1872.1  1.1      68 % (Q: 88.9 %/S:100.0 %)     threonine synthase (thrC) {Pseudomonas aeruginosa}

1.3. AMINO ACID BIOSYNTHESIS/GLUTAMATE FAMILY (26 genes)

2767.1  1.1      86 % (Q: 99.7 %/S: 98.7 %)     acetylglutamate kinase (argB) {Pseudomonas aeruginosa}
2726.1  1.1      71 % (Q: 97.2 %/S: 97.2 %)     acetylornithine aminotransferase (argD) {Vibrio cholerae}
1836.1  2.1      68 % (Q:100.0 %/S:100.0 %)     acetylornithine deacetylase (argE) {Pseudomonas aeruginosa}
2297.1  3.1      32 % (Q: 92.2 %/S: 93.9 %)     acetylornithine deacetylase (argE) {Myxococcus xanthus}
549.1   2.1      70 % (Q:100.0 %/S:100.0 %)     arginine biosynthesis bifunctional protein (argJ) {Neisseria meningitidis Z2491}
1215.1  2.1      76 % (Q: 98.9 %/S: 98.9 %)     argininosuccinate lyase (argH) {Zymomonas mobilis}
3372.1  2.1      33 % (Q: 86.5 %/S: 90.1 %)     argininosuccinate lyase (argH) {Methanococcus jannaschii}
4338.1  1.1      84 % (Q: 99.3 %/S: 99.3 %)     argininosuccinate synthase (argG) {Pseudomonas aeruginosa (strain PAO1)}
3321.1  1.1      73 % (Q: 96.8 %/S: 98.4 %)     gamma-glutamyl phosphate reductase (proA) {Pseudomonas aeruginosa}
3322.1  1.1      70 % (Q: 94.6 %/S: 97.4 %)     glutamate 5-kinase (proB) {Pseudomonas aeruginosa}
265.1   2.1      79 % (Q: 97.5 %/S: 97.5 %)     glutamate synthase large subunit {}
567.1   1.1      43 % (Q: 35.8 %/S: 43.1 %)     glutamate synthase large subunit (gltB) {Bacillus subtilis}
3789.1  2.1      95 % (Q:100.0 %/S:100.0 %)     glutamate synthase large subunit (gltB) {Rhizobium meliloti}
4487.1  2.1      81 % (Q:100.0 %/S:100.0 %)     glutamate synthase, small subunit (gltD) {Deinococcus radiodurans}
1754.1  1.1      77 % (Q: 99.7 %/S: 99.7 %)     glutaminase A (glsA) {Rhizobium etli}
2281.1  1.1      70 % (Q: 98.7 %/S: 95.8 %)     glutamine synthetase (glnA) {Pseudomonas aeruginosa}
2802.1  1.1      65 % (Q: 99.6 %/S: 97.2 %)     glutamine synthetase (glnA) {Mycobacterium tuberculosis}
3603.1  1.1      47 % (Q: 97.8 %/S: 99.8 %)     glutamine synthetase (glnA) {Pseudomonas aeruginosa}
2579.1  1.1      93 % (Q: 99.8 %/S: 99.8 %)     glutamine synthetase I (glnA) {Sinorhizobium meliloti}
84.1    1.1      87 % (Q:100.3 %/S: 99.7 %)     glutamine synthetase II (glnA) {Bradyrhizobium japonicum}
3788.1  2.1      90 % (Q:100.0 %/S:100.0 %)     glutamine synthetase III (glnA) {Sinorhizobium meliloti}
2147.1  1.1      77 % (Q:100.0 %/S:100.6 %)     N-acetyl-gamma-glutamyl-phosphate reductase (argC) {Deinococcus radiodurans}
3308.1  1.1      53 % (Q: 99.3 %/S: 97.6 %)     NAD-glutamate dehydrogenase (gdh) {Pseudomonas aeruginosa}
2725.1  1.1      74 % (Q: 98.7 %/S: 99.3 %)     ornithine carbamoyltransferase (argF) {Pyrococcus abyssi}
941.1   1.1      54 % (Q: 97.8 %/S: 91.7 %)     pyrroline-5-carboxylate reductase (proC) {Bradyrhizobium japonicum}
2419.1  2.1      23 % (Q:103.8 %/S: 98.9 %)     pyrroline-5-carboxylate reductase (proC) {Pseudomonas aeruginosa}

1.4. AMINO ACID BIOSYNTHESIS/HISTIDINE FAMILY (10 genes)

1191.1  1.1      67 % (Q:100.4 %/S: 99.6 %)     ATP phosphoribosyltransferase (hisG) {Rhodobacter sphaeroides}
1018.1  1.1      71 % (Q:100.0 %/S:100.0 %)     glutamine amidotransferase (hisH) {Rhodobacter sphaeroides}
1780.1  1.1      73 % (Q: 99.3 %/S: 99.8 %)     histidinol dehydrogenase (hisD) {Neisseria meningitidis MC58}
1225.1  2.1      68 % (Q: 97.8 %/S: 97.6 %)     histidinol-phosphate aminotransferase (hisC) {Zymomonas mobilis}
1687.1  1.1      58 % (Q: 97.8 %/S: 97.8 %)     histidinol-phosphate aminotransferase (hisC) {Streptomyces tendae}
1020.1  1.1      79 % (Q: 99.5 %/S: 99.0 %)     imidazoleglycerol-phosphate dehydratase (hisB) {Rhodobacter sphaeroides}
1016.1  1.1      83 % (Q: 99.2 %/S: 97.3 %)     imidazoleglycerol-phosphate synthase cyclase (hisF) {Azospirillum brasilense}
2596.1  1.1      67 % (Q: 98.0 %/S: 96.1 %)     phosphoribosyl c-AMP cyclohydrolase (hisI) {Zymomonas mobilis}
1015.1  1.1      60 % (Q: 98.1 %/S: 98.1 %)     phosphoribosyl-ATP pyrophosphohydrolase (hisE) {Rhodobacter capsulatus}
1017.1  1.1      79 % (Q:100.0 %/S:100.0 %)     phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase (hisA) {Azospirillum brasilense}

1.5. AMINO ACID BIOSYNTHESIS/PYRUVATE FAMILY (19 genes)

3198.1  1.1      86 % (Q: 98.8 %/S: 98.8 %)     2-isopropylmalate synthase (leuA) {Sinorhizobium meliloti}
858.1   1.1      84 % (Q:100.0 %/S:100.0 %)     3-isopropylmalate dehydratase, large subunit (leuC) {Sinorhizobium meliloti}
3330.1  1.1      84 % (Q:100.0 %/S:100.0 %)     3-isopropylmalate dehydratase, small subunit (leuD) {Neisseria meningitidis MC58}
3331.1  1.1      99 % (Q:100.0 %/S:100.0 %)     3-isopropylmalate dehydrogenase (leuB) {Agrobacterium tumefaciens}
2994.1  1.1      82 % (Q: 98.0 %/S: 98.7 %)     acetolactate synthase III, large subunit (ilvI) {Caulobacter crescentus}
2792.1  1.1      70 % (Q: 99.6 %/S: 99.8 %)     acetolactate synthase large subunit (iivG) {Pseudomonas aeruginosa}
2995.1  1.1      83 % (Q:100.5 %/S:100.0 %)     acetolactate synthase, small subunit (ilvH) {Caulobacter crescentus}
1387.1  1.1      61 % (Q: 98.0 %/S: 98.3 %)     branched-chain-amino-acid transaminase (ilvE) {Escherichia coli}
1307.1  1.1      56 % (Q: 87.3 %/S: 99.5 %)     cysteine desulfurase (nifS) {Rickettsia prowazekii}
28.1    3.1      46 % (Q: 96.5 %/S: 98.2 %)     D-alanine aminotransferase (dat) {Staphylococcus aureus}
3172.1  1.1      55 % (Q: 96.5 %/S: 98.2 %)     D-alanine aminotransferase (dat) {Bacillus halodurans}
1133.1  2.1      60 % (Q: 97.0 %/S: 96.7 %)     dihydroxy-acid dehydratase (ilvD) {Streptomyces coelicolor A3(2)}
2031.1  1.1      86 % (Q:100.5 %/S:100.0 %)     dihydroxy-acid dehydratase (ilvD) {Deinococcus radiodurans}
3084.1  2.1      80 % (Q: 97.8 %/S: 98.3 %)     dihydroxy-acid dehydratase (ilvD) {Streptomyces coelicolor A3(2)}
3283.1  1.1      87 % (Q: 99.0 %/S: 99.3 %)     dihydroxy-acid dehydratase (ilvD) {Streptomyces coelicolor A3(2)}
1142.1  2.1      60 % (Q: 96.8 %/S: 99.3 %)     hydroxymethylglutaryl-CoA lyase (hmgL) {Arabidopsis thaliana}
3012.1  1.1      88 % (Q:100.0 %/S:100.0 %)     ketol-acid reductoisomerase (ilvC) {Rhizobium meliloti}
3282.1  1.1      48 % (Q: 96.9 %/S: 96.6 %)     threonine dehydratase (ilvA) {Pseudomonas aeruginosa}
5317.1  1.1      66 % (Q: 96.9 %/S: 94.9 %)     threonine dehydratase (ilvA) {Mesorhizobium loti}

1.6. AMINO ACID BIOSYNTHESIS/SERINE FAMILY (36 genes)

4576.1  2.1      42 % (Q: 98.5 %/S: 97.1 %)     2-hydroxyacid-family dehydrogenase (xxxX) {Streptomyces coelicolor A3(2)}
3874.1  3.1      69 % (Q: 98.6 %/S: 98.8 %)     acetolactate synthase (atrC) {Agrobacterium tumefaciens}
2162.1  1.1      77 % (Q: 98.6 %/S: 98.8 %)     cysteine synthase (cysK) {Cyanidioschyzon merolae}
2218.1  1.1      82 % (Q: 98.8 %/S: 97.5 %)     cysteine synthase (cysK) {Methanosarcina barkeri}
4422.1  2.1      74 % (Q: 99.8 %/S: 99.4 %)     D-3-phosphoglycerate dehydrogenase (serA) {Bacillus halodurans}
1496.1  2.1      54 % (Q: 96.5 %/S: 97.9 %)     hippurate hydrolase {}
3280.1  1.1      49 % (Q: 98.5 %/S: 99.5 %)     hippurate hydrolase (hipO) {Campylobacter jejuni}
3975.1  2.1      63 % (Q:100.0 %/S: 96.6 %)     hippurate hydrolase {}
2141.1  1.1      77 % (Q: 99.5 %/S: 99.8 %)     O-acetylhomoserine sulfhydrylase (cysD) {Pseudomonas aeruginosa}
1892.1  1.1      76 % (Q: 89.2 %/S: 87.5 %)     phosphoadenosine phosphosulfate reductase (cysH) {Sinorhizobium meliloti}
1354.1  1.1      31 % (Q: 92.7 %/S: 58.0 %)     phosphoglycerate dehydrogenase (serA) {Methanococcus jannaschii}
1542.1  3.1      41 % (Q: 94.6 %/S: 53.1 %)     phosphoglycerate dehydrogenase (serA) {Archaeoglobus fulgidus}
2908.1  3.1      39 % (Q: 86.4 %/S: 99.7 %)     phosphoglycerate dehydrogenase (serA) {Pyrococcus abyssi}
4423.1  2.1      76 % (Q: 99.7 %/S:100.0 %)     phosphoserine aminotransferase (serC) {Methanosarcina barkeri}
5109.1  1.1      60 % (Q: 99.3 %/S: 87.5 %)     phosphoserine phosphatase {}
193.1   1.1      26 % (Q: 98.0 %/S: 99.5 %)     sarcosine oxidase (solA) {Bacillus sp. B-0618}
194.1   1.1      26 % (Q: 98.2 %/S:100.5 %)     sarcosine oxidase (solA) {Bacillus sp. NS-129}
3796.1  2.1      78 % (Q:100.1 %/S:100.0 %)     sarcosine oxidase alpha subunit (soxA) {Sinorhizobium meliloti}
4096.1  2.1      59 % (Q: 99.9 %/S: 99.8 %)     sarcosine oxidase alpha subunit (soxA) {Pseudomonas aeruginosa}
4097.1  2.1      64 % (Q: 84.9 %/S: 91.8 %)     sarcosine oxidase alpha subunit (soxA) {Pseudomonas aeruginosa}
4142.1  2.1      69 % (Q:101.1 %/S:100.0 %)     sarcosine oxidase alpha subunit (soxA) {Pseudomonas aeruginosa}
3794.1  2.1      93 % (Q:100.0 %/S:100.0 %)     sarcosine oxidase beta subunit (soxB) {Sinorhizobium meliloti}
4098.1  2.1      75 % (Q:100.0 %/S:100.0 %)     sarcosine oxidase beta subunit (soxB) {Pseudomonas aeruginosa}
4140.1  2.1      78 % (Q:100.0 %/S:100.0 %)     sarcosine oxidase beta subunit (soxB) {Pseudomonas aeruginosa}
3795.1  2.1      80 % (Q: 95.6 %/S: 94.6 %)     sarcosine oxidase delta subunit (soxD) {Sinorhizobium meliloti}
4141.1  2.1      72 % (Q: 86.5 %/S: 91.8 %)     sarcosine oxidase delta subunit (soxD) {Corynebacterium sp.}
4095.1  2.1      33 % (Q: 89.2 %/S: 85.6 %)     sarcosine oxidase gamma subunit (soxG) {Corynebacterium sp}
4143.1  2.1      60 % (Q: 87.5 %/S: 83.0 %)     sarcosine oxidase gamma subunit (soxG) {Pseudomonas aeruginosa}
3431.1  1.1      39 % (Q: 73.7 %/S: 63.1 %)     serine acetyltransferase (cysE) {Cyanothece PCC8801}
3435.1  1.1      80 % (Q:100.4 %/S: 90.4 %)     serine acetyltransferase (cysE) {Rhizobium leguminosarum}
4177.1  2.1      94 % (Q:100.0 %/S:100.0 %)     serine dehydrogenase (sdh) {Agrobacterium tumefaciens}
2347.1  1.1      86 % (Q: 99.1 %/S: 97.3 %)     serine hydroxymethyltransferase (glyA) {Methylobacterium extorquens}
4094.1  2.1      68 % (Q: 98.6 %/S: 95.9 %)     serine hydroxymethyltransferase (glyA) {Hyphomicrobium methylovorum}
1890.1  1.1      78 % (Q: 99.4 %/S: 99.4 %)     sulfate adenylate transferase, subunit 1 (cysN) {Rhizobium tropici}
1891.1  1.1      83 % (Q:100.0 %/S:100.0 %)     sulfate adenylate transferase, subunit 2 (cysD) {Sinorhizobium meliloti}
266.1   2.1      61 % (Q: 99.7 %/S: 99.7 %)     threonine aldolase (xxxX) {Rhodobacter capsulatus}

1.99. AMINO ACID BIOSYNTHESIS/OTHER (12 genes)

1852.1  2.1      77 % (Q:100.0 %/S:100.0 %)     agaE protein (agaE) {Agrobacterium tumefaciens}
2961.1  4.1      98 % (Q:100.0 %/S: 77.0 %)     agrocinopine phosphodiesterase (accF) {Agrobacterium tumefaciens}
2963.1  4.1     100 % (Q:100.0 %/S:100.0 %)     agrocinopine synthase (torf6) {Agrobacterium tumefaciens}
2971.1  4.1      94 % (Q: 99.5 %/S: 92.0 %)     agrocinopine synthase (acsx) {Agrobacterium vitis}
2970.1  4.1      99 % (Q:100.0 %/S:100.0 %)     agrocinopine synthesis reductase (mas1) {Agrobacterium tumefaciens c58}
2978.1  4.1      99 % (Q:100.0 %/S:100.0 %)     D-nopaline dehydrogenase (nos) {Agrobacterium tumefaciens SAKURA}
968.1   2.1      47 % (Q: 96.7 %/S: 93.2 %)     hydantoin racemase (huy) {Pseudomonas sp.}
222.1   4.1      99 % (Q:100.0 %/S:100.0 %)     hydantoin utilization protein (hyuB) {Agrobacterium tumefaciens SAKURA}
223.1   4.1      99 % (Q:100.0 %/S:100.0 %)     hydantoin utilization protein (hyuA) {Agrobacterium tumefaciens SAKURA}
4517.1  2.1      52 % (Q:100.2 %/S: 99.6 %)     hydantoinase A (hyuA) {Mesorhizobium loti}
3197.1  1.1      82 % (Q: 83.3 %/S: 97.4 %)     N-methylproline demethylase (stcD) {Rhizobium meliloti}
3251.1  1.1      27 % (Q: 96.8 %/S: 98.9 %)     oxidoreductase (xxxX) {Pseudomonas aeruginosa}

2.1. PURINES, PYRIMIDINES, NUCLEOSIDES, AND NUCLEOTIDES/2-DEOXYRIBONUCLEOTIDE METABOLISM (7 genes)

1066.1  1.1      60 % (Q: 89.2 %/S: 92.5 %)     glutaredoxin protein (nrdH) {Mycobacterium tuberculosis}
1067.1  1.1      57 % (Q:100.0 %/S: 60.8 %)     NrdI protein involved in ribonucleotide reduction (nrdI) {Escherichia coli}
1068.1  1.1      83 % (Q:100.0 %/S: 95.6 %)     ribonucleoside-diphosphate reductase 2 alpha chain (nrdE) {Mycobacterium tuberculosis}
2609.1  1.1      79 % (Q:100.2 %/S: 97.2 %)     ribonucleoside-diphosphate reductase 2 alpha chain (nrdE) {Streptomyces coelicolor A3(2)}
1069.1  1.1      74 % (Q: 98.8 %/S: 98.5 %)     ribonucleoside-diphosphate reductase 2 beta chain (nrdF) {Mycobacterium tuberculosis}
2838.1  1.1      71 % (Q:100.0 %/S:100.0 %)     thioredoxin reductase (trxB) {Rickettsia prowazekii}
2984.1  1.1      78 % (Q:100.0 %/S:100.0 %)     thymidylate synthase (thyA) {Neisseria meningitidis Z2491}

2.2. PURINES, PYRIMIDINES, NUCLEOSIDES, AND NUCLEOTIDES/NUCLEOTIDE AND NUCLEOSIDE INTERCONVERSIONS (9 genes)

2721.1  1.1      80 % (Q: 85.4 %/S: 99.7 %)     2'-deoxycytidine 5'-triphosphate deaminase (dcd) {Escherichia coli K12}
2023.1  1.1      64 % (Q: 99.5 %/S: 98.5 %)     adenylate kinase (adk) {Archaeoglobus fulgidus}
1656.1  1.1      41 % (Q: 98.6 %/S: 94.4 %)     ADP-Ribose Pyrophosphatase (nudF) {Aeropyrum pernix}
4171.1  2.1      65 % (Q: 99.0 %/S: 96.3 %)     cytidylate monophosphate kinase (cmk) {Rhodobacter sphaeroides}
2624.1  1.1      64 % (Q: 93.2 %/S: 98.3 %)     deoxyguanosinetriphosphate triphosphohydrolase (dgt) {Rickettsia prowazekii}
3238.1  1.1      63 % (Q:100.0 %/S: 99.8 %)     guanine deaminase (gda) {Pseudomonas aeruginosa}
2404.1  1.1      72 % (Q: 91.4 %/S: 99.0 %)     guanylate kinase (gmk) {Rickettsia prowazekii}
2386.1  1.1      84 % (Q:100.0 %/S:100.0 %)     nucleoside diphosphate kinase (ndk) {Rhodovulum sulfidophilum}
731.1   1.1      78 % (Q: 99.2 %/S: 96.8 %)     uridylate kinase (pyrH) {Pseudomonas aeruginosa}

2.3. PURINES, PYRIMIDINES, NUCLEOSIDES, AND NUCLEOTIDES/PURINE RIBONUCLEOTIDE BIOSYNTHESIS (22 genes)

2370.1  1.1      88 % (Q:100.0 %/S:100.0 %)     5'-phosphoribosyl-5-aminoimidazole synthetase (garS) {Rhizobium leguminosarum}
2371.1  1.1      69 % (Q: 69.7 %/S: 75.3 %)     5'-phosphoribosylglycinamide formyltransferase (purN) {Rhizobium leguminosarum}
1740.1  1.1      83 % (Q: 96.7 %/S:100.0 %)     adenylosuccinate lyase (purB) {Bacillus subtilis}
3118.1  1.1      80 % (Q:100.0 %/S:100.0 %)     adenylosuccinate synthetase (purA) {Brucella abortus}
233.1   1.1      90 % (Q: 97.2 %/S: 98.0 %)     amidophosphoribosyltransferase (purF) {Rhizobium etli}
3791.1  2.1      84 % (Q:100.0 %/S:100.0 %)     amidophosphoribosyltransferase (purF) {Sinorhizobium meliloti}
1982.1  1.1      71 % (Q:100.0 %/S:100.0 %)     bifunctional purine biosynthesis protein (purH) {Salmonella typhimurium LT2}
3132.1  1.1      68 % (Q: 75.2 %/S: 80.7 %)     formyltetrahydrofolate deformylase (purU) {Rhodobacter capsulatus}
3787.1  2.1      66 % (Q: 75.0 %/S: 82.1 %)     formyltetrahydrofolate deformylase (purU) {Rhodobacter capsulatus}
4093.1  2.1      61 % (Q: 70.1 %/S: 82.1 %)     formyltetrahydrofolate deformylase (purU) {Rhodobacter capsulatus}
3524.1  1.1      75 % (Q: 99.0 %/S:100.0 %)     GMP synthase (guaA) {Escherichia Coli}
3568.1  1.1      51 % (Q: 97.3 %/S: 89.7 %)     GMP synthase (guaA) {Pseudomonas aeruginosa}
4329.1  1.1      64 % (Q: 92.2 %/S: 99.6 %)     GMP synthase (guaA) {Pseudomonas aeruginosa}
295.1   1.1      46 % (Q: 92.0 %/S: 97.9 %)     guanylate kinase (gmk) {Pseudomonas aeruginosa}
1616.1  1.1      85 % (Q: 99.6 %/S: 94.2 %)     inosine-5`-monophosphate dehydrogenase (guaB) {Rhizobium tropici}
1635.1  1.1      70 % (Q: 99.8 %/S: 99.8 %)     phosphoribosylamine--glycine ligase (purD) {Vibrio cholerae}
4462.1  2.1      76 % (Q: 98.8 %/S: 99.4 %)     phosphoribosylaminoimidazole carboxylase catalytic subunit (purE) {Brucella melitensis}
4463.1  2.1      69 % (Q: 96.9 %/S: 96.9 %)     phosphoribosylaminoimidazole carboxylase, ATPase subunit (purK) {Brucella melitensis}
1742.1  1.1      87 % (Q: 99.6 %/S: 95.8 %)     phosphoribosylaminoimidazole-succinocarboxamide synthase (purC) {Deinococcus radiodurans}
4236.1  1.1      71 % (Q: 99.1 %/S: 92.9 %)     phosphoribosylaminoimidazole-succinocarboxamide synthase (purC) {Arabidopsis thaliana}
1744.1  1.1      75 % (Q: 99.5 %/S: 92.8 %)     phosphoribosylformylglycinamidine synthase I (purQ) {Deinococcus radiodurans}
1747.1  1.1      86 % (Q: 95.2 %/S: 99.3 %)     phosphoribosylformylglycinamidine synthetase II (purL) {Sinorhizobium fredii}

2.4. PURINES, PYRIMIDINES, NUCLEOSIDES, AND NUCLEOTIDES/PYRIMIDINE RIBONUCLEOTIDE BIOSYNTHESIS (12 genes)

797.1   1.1      84 % (Q: 96.2 %/S: 92.3 %)     aspartate carbamoyl transferase (pyrB) {Pseudomonas fluorescens}
2831.1  1.1      84 % (Q:100.4 %/S:100.0 %)     carbamoylphosphate synthase large subunit (carB) {Zymomonas mobilis}
2826.1  1.1      75 % (Q: 99.3 %/S:100.0 %)     carbamoylphosphate synthase small chain (carA) {Zymomonas mobilis}
2294.1  3.1      34 % (Q: 61.9 %/S: 47.3 %)     CTP synthase (pyrG) {Methanobacterium thermoautotrophicum}
3468.1  1.1      86 % (Q: 93.8 %/S:100.0 %)     CTP synthase (pyrG) {Azospirillum brasilense}
2216.1  1.1      65 % (Q: 94.2 %/S: 91.3 %)     deoxyuridine 5'triphosphate nucleotidohydrolase (dut) {Aquifex aeolicus}
796.1   1.1      63 % (Q: 99.3 %/S: 99.8 %)     dihydroorotase (pyrC) {Aquifex aeolicus}
2753.1  1.1      55 % (Q: 86.8 %/S: 95.0 %)     dihydroorotase (pyrC) {Pseudomonas aeruginosa}
631.1   1.1      62 % (Q: 97.8 %/S: 99.2 %)     dihydroorotate dehydrogenase (pyrD) {Agrocybe aegerita}
1100.1  1.1      76 % (Q: 99.2 %/S: 99.6 %)     dihydropyrimidinase (dht) {Pseudomonas putida}
2752.1  1.1      77 % (Q: 70.7 %/S: 84.3 %)     orotate phosphoribosyltransferase (pyrE) {Rhizobium trifolii}
2230.1  1.1      77 % (Q: 95.7 %/S: 96.2 %)     orotidine 5'-monophosphate (pyrF) {Sinorhizobium meliloti}

2.5. PURINES, PYRIMIDINES, NUCLEOSIDES, AND NUCLEOTIDES/SALVAGE OF NUCLEOSIDES AND NUCLEOTIDES (24 genes)

2168.1  1.1      69 % (Q: 99.2 %/S: 99.7 %)     2',3'-cyclic-nucleotide 2'-phosphodiesterase (cpdB) {Bacillus subtilis}
132.1   1.1      55 % (Q: 96.9 %/S: 96.1 %)     2-deoxyribose-5-phosphate aldolase {}
3523.1  1.1      66 % (Q:100.0 %/S:100.0 %)     5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (pfs) {Haemophilus influenzae (strain Rd KW20)}
4477.1  2.1      57 % (Q:111.3 %/S:100.3 %)     5'-nucleotidase (xxxX) {Discopyge ommata}
3219.1  1.1      40 % (Q: 97.4 %/S: 95.2 %)     adenine deaminase (adeC) {Bacillus halodurans}
3992.1  2.1      37 % (Q: 90.5 %/S: 90.8 %)     adenine deaminase (adeC) {Bacillus halodurans}
1048.1  1.1      84 % (Q: 96.1 %/S: 95.6 %)     adenine phosphoribosyltransferase (apt) {Rhizobium galegae}
128.1   1.1      56 % (Q: 98.5 %/S: 98.8 %)     adenosine deaminase (add) {Streptomyces coelicolor A3(2)}
48.1    1.1      62 % (Q: 94.8 %/S: 97.7 %)     cytidine deaminase (cdd) {Bacillus psychrophilus}
1218.1  2.1      69 % (Q:100.0 %/S:100.0 %)     hypoxanthine phosphoribosyltransferase (hpt) {Vibrio cholerae}
2772.1  1.1      69 % (Q: 94.3 %/S:100.3 %)     inosine-uridine preferring nucleoside hydrolase (iunH) {Schizosaccharomyces pombe}
3446.1  1.1      49 % (Q: 95.7 %/S: 96.0 %)     inosine-uridine preferring nucleoside hydrolase (iunH) {Arabidopsis thaliana}
3993.1  2.1      33 % (Q:100.0 %/S: 97.5 %)     inosine-uridine preferring nucleoside hydrolase (iunH) {Deinococcus radiodurans}
127.1   1.1      64 % (Q: 99.8 %/S: 98.1 %)     phosphopentomutase (drm) {Escherichia coli K12}
49.1    1.1      70 % (Q: 99.6 %/S: 98.5 %)     purine nucleoside phosphorylase (deoD) {Bacillus subtilis}
934.1   1.1      80 % (Q:100.3 %/S:100.0 %)     ribose-phosphate pyrophosphokinase (prsA) {Neisseria meningitidis}
3211.1  1.1      60 % (Q: 96.9 %/S: 77.8 %)     thymidine kinase (tdk) {Vibrio cholerae}
131.1   1.1      62 % (Q: 99.3 %/S: 99.1 %)     thymidine phosphorylase (deoA) {Escherichia coli K12}
1908.1  1.1      61 % (Q: 94.1 %/S: 79.0 %)     thymydilate kinase (tmk) {Caulobacter crescentus}
129.1   1.1      79 % (Q:100.0 %/S:100.0 %)     uracil phosphoribosyltransferase (upp) {Streptococcus salivarius}
3233.1  1.1      61 % (Q: 97.8 %/S: 97.0 %)     xanthine dehydrogenase (xdhA) {Pseudomonas aeruginosa}
3234.1  1.1      72 % (Q: 99.7 %/S: 95.7 %)     xanthine dehydrogenase C-terminal subunit (xdhB) {Pseudomonas aeruginosa}
3235.1  1.1      52 % (Q:100.0 %/S: 96.7 %)     xanthine dehydrogenase chaperone (xdhC) {Pseudomonas aeruginosa}
2610.1  1.1      72 % (Q: 81.0 %/S:100.0 %)     xanthine-guanine phosphoribosyltransferase (gpt) {Haemophilus influenzae Rd}

2.6. PURINES, PYRIMIDINES, NUCLEOSIDES, AND NUCLEOTIDES/SUGAR-NUCLEOTIDE BIOSYNTHESIS AND CONVERSIONS (1 genes)

4697.1  2.1      80 % (Q: 99.4 %/S: 99.4 %)     GDP-mannose 4,6-dehydratase (gmd) {Brucella melitensis}

2.99. PURINES, PYRIMIDINES, NUCLEOSIDES, AND NUCLEOTIDES/OTHER (6 genes)

897.1   1.1      74 % (Q: 99.6 %/S: 95.7 %)     AMP nucleosidase (amn) {Escherichia coli K12}
1183.1  1.1      66 % (Q: 93.4 %/S:100.0 %)     cytidine and deoxycytidylate deaminase (codA) {Bradyrhizobium japonicum}
2565.1  2.1      49 % (Q: 97.7 %/S: 92.2 %)     DNA-3-methyladenine glycosidase II (alkA) {Deinococcus radiodurans}
3226.1  1.1      65 % (Q:100.4 %/S: 99.8 %)     GTP-binding protein (engA) {Rickettsia prowazekii}
1363.1  1.1      35 % (Q: 94.4 %/S: 93.9 %)     ureidoglycolate hydrolase (allA) {Rhodobacter capsulatus}
3246.1  1.1      50 % (Q: 94.6 %/S: 96.3 %)     ureidoglycolate hydrolase (allA) {Pseudomonas aeruginosa}

3.1. FATTY ACID AND PHOSPHOLIPID METABOLISM/BIOSYNTHESIS (51 genes)

724.1   1.1      69 % (Q: 93.5 %/S: 94.7 %)     (3R)-Hydroxymyristoyl-[acyl carrier protein]- Dehydratase (fabZ) {Brucella abortus}
1222.1  2.1      57 % (Q: 98.1 %/S: 99.6 %)     1-acyl-sn-glycerol-3-phosphate acyltransferase (plsC) {Rhodobacter sphaeroides}
2178.1  1.1      60 % (Q: 97.7 %/S: 88.4 %)     1-acyl-sn-glycerol-3-phosphate acyltransferase (plsC) {Sinorhizobium meliloti}
382.1   1.1      91 % (Q:100.0 %/S:100.0 %)     3-oxoacyl-(acyl carrier protein) reductase (fabG) {Rhizobium leguminosarum}
822.1   1.1      82 % (Q: 94.4 %/S:100.0 %)     3-oxoacyl-(acyl carrier protein) reductase (fabG) {Deinococcus radiodurans}
1167.1  1.1      52 % (Q: 97.7 %/S:100.0 %)     3-oxoacyl-(acyl carrier protein) reductase (fabG) {Thermotoga maritima (strain MSB8)}
2407.1  1.1      89 % (Q: 99.5 %/S: 99.3 %)     3-oxoacyl-(acyl carrier protein) synthase II (fabF) {Sinorhizobium meliloti}
1946.1  3.1      43 % (Q:100.8 %/S:100.0 %)     3-oxoacyl-(acyl-carrier protein) reductase (fabG) {Xylella fastidiosa}
2848.1  3.1      58 % (Q: 98.4 %/S: 99.6 %)     3-oxoacyl-(acyl-carrier protein) reductase (fabG) {Pseudomonas aeruginosa}
3633.1  2.1      54 % (Q: 97.2 %/S: 96.8 %)     3-oxoacyl-(acyl-carrier protein) reductase (fabG) {Haemophilus influenzae}
3875.1  3.1      54 % (Q: 99.6 %/S:100.0 %)     3-oxoacyl-(acyl-carrier protein) reductase (fabG) {Mycobacterium smegmatis}
4671.1  2.1      36 % (Q: 91.9 %/S: 96.0 %)     3-oxoacyl-(acyl-carrier protein) reductase (fabG) {Chlamydia trachomatis}
1923.1  3.1      67 % (Q: 94.5 %/S:100.0 %)     3-oxoacyl-(acyl-carrier-protein) reductase (fabG) {Aquifex aeolicus}
2518.1  2.1      38 % (Q: 99.2 %/S:100.0 %)     3-oxoacyl-(acyl-carrier-protein) reductase (fabG) {Vibrio cholerae}
563.1   1.1      84 % (Q: 99.8 %/S:100.0 %)     3-oxoacyl-(acyl-carrier-protein) synthase I (fabB) {Pseudomonas aeruginosa}
3450.1  1.1      66 % (Q: 98.4 %/S:100.7 %)     3-oxoacyl-(acyl-carrier-protein) synthase II (fabF) {Helicobacter pylori J99}
3451.1  1.1      56 % (Q: 99.2 %/S: 99.7 %)     3-oxoacyl-(acyl-carrier-protein) synthase II (fabF) {Streptomyces rimosus}
3802.1  2.1      83 % (Q: 97.2 %/S: 97.0 %)     3-oxoacyl-(acyl-carrier-protein) synthase II (fabF) {Pseudomonas aeruginosa}
998.1   1.1      82 % (Q:100.0 %/S:100.0 %)     3-oxoacyl-(acyl-carrier-protein) synthase III (fabH) {Rhodobacter capsulatus}
2434.1  2.1      63 % (Q: 98.5 %/S: 98.8 %)     3-oxoacyl-(acyl-carrier-protein) synthase III (fabH) {Streptomyces coelicolor A3(2)}
1623.1  1.1      48 % (Q: 95.3 %/S: 96.6 %)     4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (ipk) {Zymomonas mobilis}
3312.1  1.1      78 % (Q:100.0 %/S:100.0 %)     acetoacetyl CoA reductase (phbB) {Sinorhizobium meliloti}
3747.1  2.1      35 % (Q:100.0 %/S: 97.4 %)     acetyl-CoA carboxylase biotin carboxyl carrier protein (accB) {Neisseria meningitidis Z2491}
1240.1  2.1      70 % (Q:100.0 %/S:100.3 %)     acetyl-CoA carboxylase carboxyl transferase, alpha subunit (accA) {Magnetospirillum sp}
815.1   1.1      59 % (Q:100.0 %/S:106.6 %)     acetyl-CoA carboxylase, biotin carboxyl carrier protein (accB) {Haemophilus influenzae Rd}
814.1   1.1      83 % (Q: 99.1 %/S: 99.3 %)     acetyl-CoA carboxylase, biotin carboxylase (accC) {Haemophilus influenzae Rd}
3746.1  2.1      58 % (Q: 95.7 %/S: 98.0 %)     acetyl-CoA carboxylase, biotin carboxylase (accC) {Neisseria meningitidis MC58}
1952.1  1.1      70 % (Q: 96.0 %/S: 92.9 %)     acetyl-coenzyme A carboxyl transferase, beta subunit (accD) {xylella fastidiosa}
3292.1  1.1      81 % (Q: 98.6 %/S: 99.4 %)     acetyl-coenzyme A synthetase (acs) {Agrobacterium rhizogenes}
2408.1  1.1      98 % (Q:100.0 %/S:100.0 %)     acyl carrier protein (acpP) {Rhizobium leguminosarum}
3453.1  1.1      95 % (Q: 96.8 %/S: 98.9 %)     acyl carrier protein (acpP) {Rhizobium leguminosarum}
3300.1  1.1      64 % (Q: 94.2 %/S: 96.9 %)     acyl-CoA thioesterase II (tesB) {Escherichia coli}
3149.1  1.1      63 % (Q: 99.0 %/S:100.0 %)     cardiolipin synthase (cls) {Pseudomonas aeruginosa}
1637.1  1.1      49 % (Q: 99.3 %/S: 96.5 %)     cyclopropane-fatty-acyl-phospholipid synthase (cfa) {Pseudomonas aeruginosa}
3043.1  1.1      60 % (Q: 99.7 %/S: 98.0 %)     cyclopropane-fatty-acyl-phospholipid synthase (cfa) {Arabidopsis thaliana}
562.1   1.1      78 % (Q: 97.1 %/S: 97.1 %)     D-3-hydroxydecanoyl-(acyl carrier-protein) dehydratase (fabA) {Escherichia coli}
2054.1  1.1      54 % (Q: 85.5 %/S: 86.1 %)     diacylglycerol kinase (dgk) {Pseudomonas denitrificans}
564.1   1.1      73 % (Q: 99.3 %/S: 99.6 %)     enoyl-(acyl-carrier-protein) reductase [NADH] (fabI) {Rickettsia prowazekii}
1330.1  1.1      78 % (Q:100.0 %/S:100.0 %)     enoyl-(acyl-carrier-protein) reductase [NADH] (fabI) {Campylobacter jejuni}
999.1   1.1      66 % (Q: 93.1 %/S: 94.9 %)     fatty acid/phospholipid synthesis protein (plsX) {Rhodobacter capsulatus}
1675.1  1.1      75 % (Q: 98.5 %/S: 96.4 %)     holo-(acyl-carrier Protein) synthase (acpS) {Bradyrhizobium japonicum}
3452.1  1.1      39 % (Q: 59.1 %/S: 61.4 %)     hydroxymyristoyl-acyl carrier protein dehydratase (fabZ) {Chlamydia trachomatis}
1370.1  1.1      46 % (Q: 93.6 %/S: 97.1 %)     long-chain-fatty-acid-CoA-ligase (xxxX) {Pseudomonas sp}
2748.1  1.1      69 % (Q: 97.4 %/S: 98.1 %)     long-chain-fatty-acid-CoA-ligase (fadD) {Xanthomonas campestris}
383.1   1.1      84 % (Q: 94.6 %/S: 99.7 %)     malonyl-CoA:acyl carrier protein transacylase (fabD) {Sinorhizobium meliloti}
728.1   1.1      47 % (Q: 96.8 %/S: 98.9 %)     phosphatidate cytidylyltransferase (cdsA) {Brucella abortus}
1286.1  1.1      84 % (Q: 91.9 %/S: 99.2 %)     phosphatidylcholine synthase (pcs) {Sinorhizobium meliloti}
2382.1  1.1      76 % (Q:101.5 %/S:100.0 %)     phosphatidylglycerophosphate synthase (pgsA) {Rhodobacter sphaeroides}
109.1   1.1      73 % (Q: 99.6 %/S: 99.6 %)     phosphatidylserine decarboxylase (psd) {Sinorhizobium meliloti}
108.1   1.1      69 % (Q: 97.6 %/S: 97.2 %)     phosphatidylserine synthase (pssA) {Sinorhizobium meliloti}
1174.1  1.1      51 % (Q: 98.3 %/S:100.3 %)     tetraacyldisaccharide 4'-kinase (lpxK) {Pseudomonas aeruginosa}

3.2. FATTY ACID AND PHOSPHOLIPID METABOLISM/DEGRADATION (26 genes)

2449.1  3.1      61 % (Q: 68.6 %/S: 91.2 %)     3-hydroxyacyl-CoA dehydrogenase (xxxX) {Pseudomonas aeruginosa}
4195.1  2.1      53 % (Q: 98.8 %/S: 98.9 %)     acetoacetyl-CoA synthetase (acsA) {Rhizobium meliloti (Sinorhizobium meliloti)}
3311.1  1.1      84 % (Q: 99.0 %/S:100.0 %)     acetyl-CoA acetyltransferase (atoB) {Zoogloea Ramigera}
798.1   1.1      66 % (Q: 97.5 %/S: 97.8 %)     acyl-CoA dehydrogenase (acd) {Streptomyces coelicolor}
1145.1  2.1      70 % (Q: 90.0 %/S:100.3 %)     acyl-CoA dehydrogenase (acd) {Pseudomonas aeruginosa}
1148.1  2.1      76 % (Q: 98.7 %/S:100.0 %)     acyl-CoA dehydrogenase (mmgC) {Bacillus subtilis}
1309.1  1.1      68 % (Q:100.2 %/S:101.0 %)     acyl-CoA dehydrogenase (mmgC) {Deinococcus radiodurans}
1368.1  1.1      38 % (Q: 90.8 %/S: 79.2 %)     acyl-CoA dehydrogenase (acd) {Deinococcus radiodurans}
1458.1  4.1      32 % (Q: 90.8 %/S: 95.5 %)     acyl-CoA dehydrogenase (acd) {Bacillus subtilis}
1480.1  2.1      59 % (Q: 96.1 %/S: 97.3 %)     acyl-CoA dehydrogenase (acd) {Pseudomonas aeruginosa}
1488.1  2.1      57 % (Q: 66.6 %/S: 88.5 %)     acyl-CoA dehydrogenase (acd) {Pseudomonas aeruginosa}
1810.1  1.1      75 % (Q: 95.4 %/S:100.3 %)     acyl-CoA dehydrogenase (acd) {Deinococcus radiodurans}
2327.1  3.1      85 % (Q:100.0 %/S:100.0 %)     acyl-CoA dehydrogenase (acd) {Pseudomonas aeruginosa}
4256.1  1.1      25 % (Q: 90.6 %/S: 95.4 %)     acyl-CoA dehydrogenase (acd) {Mycobacterium tuberculosis}
1809.1  1.1      81 % (Q:100.0 %/S:100.0 %)     acyl-CoA thiolase (xxxX) {Mycobacterium tuberculosis}
1468.1  2.1      53 % (Q:101.4 %/S: 99.1 %)     arylesterase (ada) {Agrobacterium tumefaciens IFO 12607}
2209.1  1.1      75 % (Q: 99.6 %/S: 98.1 %)     enoyl CoA hydratase (fadB) {Rhizobium meliloti}
521.1   2.1      45 % (Q: 93.8 %/S: 96.8 %)     enoyl-CoA hydratase (xxxX) {Mycobacterium tuberculosis strain H37RV}
1371.1  1.1      45 % (Q: 92.1 %/S: 91.0 %)     enoyl-CoA hydratase (fad) {Archaeoglobus fulgidus}
1808.1  1.1      70 % (Q: 98.9 %/S: 98.8 %)     enoyl-CoA hydratase (fadB) {Streptomyces coelicolor}
1310.1  1.1      59 % (Q: 94.0 %/S: 98.8 %)     enoyl-CoA hydratase/isomerase (xxxX) {Pseudomonas aeruginosa}
4670.1  2.1      35 % (Q: 93.8 %/S: 98.8 %)     fatty acid CoA ligase (xxxX) {Streptomyces coelicolor}
3805.1  2.1      43 % (Q: 53.6 %/S: 54.7 %)     glycerophosphodiester phosphodiesterase (ugpQ) {Bacillus halodurans}
4196.1  2.1      52 % (Q: 98.1 %/S: 99.2 %)     hydroxybutyrate dehydrogenase (xxxX) {Rhizobium meliloti}
3145.1  1.1      33 % (Q: 82.0 %/S: 53.2 %)     lipase esterase (xxxX) {Bacillus halodurans}
3504.1  1.1      36 % (Q:101.2 %/S:101.0 %)     long-chain fatty acid-CoA ligase (fadD) {Deinococcus radiodurans}

3.99. FATTY ACID AND PHOSPHOLIPID METABOLISM/OTHER (11 genes)

1213.1  2.1      78 % (Q: 95.0 %/S: 98.6 %)     3-hydroxybutyryl-CoA dehydrogenase (hbdA) {Bradyrhizobium japonicum}
1147.1  2.1      70 % (Q: 93.5 %/S: 98.5 %)     acetyl-CoA C-acetyltransferase (xxxX) {Pseudomonas aeruginosa}
2170.1  1.1      56 % (Q: 96.1 %/S: 93.8 %)     acyl-carrier-protein phosphodiesterase (acpD) {Azospirillum brasilense}
3028.1  1.1      70 % (Q: 93.8 %/S: 93.1 %)     acyl-CoA hydrolase (xxxX) {Neisseria meningitidis}
3645.1  2.1      41 % (Q: 82.9 %/S: 59.0 %)     acyl-CoA hydrolase (xxxX) {Rattus norvegicus}
3668.1  2.1      63 % (Q: 92.2 %/S: 90.8 %)     acyl-CoA hydrolase (xxxX) {Escherichia coli}
1685.1  1.1      57 % (Q: 99.2 %/S: 98.5 %)     aldolase (xxxX) {Pseudomonas aeruginosa}
2960.1  4.1      99 % (Q: 97.5 %/S: 91.5 %)     arabinose phosphate phosphatase (accG) {Agrobacterium tumefaciens}
1506.1  1.1      72 % (Q: 99.6 %/S: 95.2 %)     esterase D (xxxX) {Homo sapiens}
3691.1  2.1      44 % (Q: 97.8 %/S: 94.2 %)     lysophospholipase (pldB) {Salmonella typhimurium LT2}
3478.1  1.1      48 % (Q: 88.4 %/S: 98.3 %)     phospholipase D family protein (xxxX) {Escherichia coli}

4.1. BIOSYNTHESIS OF COFACTORS, PROSTHETIC GROUPS, AND CARRIERS/BIOTIN (10 genes)

2431.1  2.1      64 % (Q: 97.6 %/S: 98.2 %)     8-amino-7-oxononanoate synthase (bioF) {Bacillus sphaericus}
893.1   1.1      58 % (Q: 93.0 %/S: 95.6 %)     adenosylmethionine-8-amino-7-oxononanoate aminotransferase (bioA) {Pseudomonas aeruginosa}
2077.1  2.1      65 % (Q: 99.1 %/S: 99.1 %)     adenosylmethionine-8-amino-7-oxononanoate aminotransferase (bioA) {Pseudomonas aeruginosa}
2433.1  2.1      66 % (Q: 95.8 %/S: 97.9 %)     adenosylmethionine-8-amino-7-oxononanoate aminotransferase (bioA) {Chlamydophila pneumoniae (strains CWL029 and AR39)}
4720.1  2.1      87 % (Q:100.0 %/S:100.0 %)     adenosylmethionine-8-amino-7-oxononanoate aminotransferase (bioA) {Rhizobium sp}
2475.1  2.1      52 % (Q: 98.9 %/S: 97.2 %)     aminotransferase (xxxX) {Pseudomonas fluorescens}
1323.1  1.1      47 % (Q: 98.9 %/S: 82.1 %)     biotin synthesis BioY protein (bioY) {Deinococcus radiodurans}
2430.1  2.1      76 % (Q: 90.6 %/S: 92.7 %)     biotin synthetase (bioB) {Escherichia coli K12}
10077.1 1.1      67 % (Q: 96.9 %/S: 96.5 %)     birA bifunctional protein {}
2432.1  2.1      62 % (Q: 96.2 %/S: 96.7 %)     dethiobiotin synthase (bioD) {Chlamydophila pneumoniae AR39}

4.2. BIOSYNTHESIS OF COFACTORS, PROSTHETIC GROUPS, AND CARRIERS/FOLIC ACID (8 genes)

4446.1  2.1      56 % (Q: 94.9 %/S: 94.9 %)     5-formyltetrahydrofolate cyclo-ligase (xxxX) {Streptomyces coelicolor A3(2)}
531.1   1.1      62 % (Q: 89.3 %/S: 93.5 %)     6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase (folK) {Methylobacterium extorquens}
2985.1  1.1      52 % (Q: 95.4 %/S: 97.1 %)     dihydrofolate reductase (folA) {Bacillus halodurans}
532.1   1.1      64 % (Q: 94.2 %/S: 95.8 %)     dihydroneopterin aldolase (folB) {Methylobacterium extorquens}
533.1   1.1      65 % (Q: 97.2 %/S: 98.2 %)     dihydropteroate synthase (folP) {Methylobacterium extorquens}
1951.1  1.1      68 % (Q: 95.4 %/S: 98.0 %)     folylpolyglutamate synthase (folC) {Methylobacterium sp}
2597.1  1.1      72 % (Q: 89.4 %/S: 94.4 %)     GTP cyclohydrolase I (folE) {Xylella fastidiosa}
3508.1  1.1      62 % (Q: 96.5 %/S: 87.1 %)     para-aminobenzoate synthase component I (pabB) {Vibrio cholerae}

4.3. BIOSYNTHESIS OF COFACTORS, PROSTHETIC GROUPS, AND CARRIERS/GLUTATHIONE (6 genes)

212.1   2.1      52 % (Q:105.6 %/S: 96.9 %)     gamma-glutamyltranspeptidase (ggt) {Streptomyces coelicolor A3-2}
2320.1  3.1      60 % (Q: 98.8 %/S: 98.3 %)     gamma-glutamyltranspeptidase (ggt) {Vibrio cholerae}
1642.1  1.1      71 % (Q:100.0 %/S:100.0 %)     glutamate-cysteine ligase (gsh1) {Arabidopsis thaliana}
3462.1  1.1      66 % (Q: 99.6 %/S: 99.8 %)     glutathione reductase (gor) {Brassica juncea}
2220.1  1.1      76 % (Q: 96.6 %/S: 98.4 %)     glutathione synthetase (gshB) {Vibrio cholerae}
4208.1  2.1      30 % (Q: 90.5 %/S: 99.1 %)     glutathione synthetase (gshB) {Vibrio cholerae}

4.4. BIOSYNTHESIS OF COFACTORS, PROSTHETIC GROUPS, AND CARRIERS/HEME AND PORPHYRIN (31 genes)

4294.1  1.1      98 % (Q:100.0 %/S: 85.7 %)     5-aminolevulinate synthase (hemA) {Agrobacterium radiobacter}
52.1    1.1      69 % (Q: 98.5 %/S: 99.0 %)     cob(I)alamin adenosyltransferase (cobO) {Pseudomonas aeruginosa}
3342.1  1.1      37 % (Q:108.6 %/S: 98.4 %)     Cobalamin biosynthesis associated protein (cobG) {Pseudomonas denitrificans}
1995.1  1.1      60 % (Q:100.3 %/S: 99.4 %)     cobalamin biosynthesis protein (cobD) {Methylobacterium sp. CM4}
3343.1  1.1      63 % (Q:100.6 %/S: 99.7 %)     cobalamin biosynthesis protein (cobN) {Rhodobacter capsulatus}
5584.1  1.1      51 % (Q: 93.1 %/S: 94.4 %)     cobalamin biosynthesis protein {}
1994.1  1.1      50 % (Q: 95.1 %/S: 95.1 %)     cobalamin biosynthetic protein (cobC) {Pseudomonas aeruginosa}
3335.1  1.1      60 % (Q: 94.4 %/S: 98.3 %)     cobalamin biosynthetic protein (cbiD) {Methylobacterium sp. CM4}
54.1    1.1      72 % (Q: 99.7 %/S: 99.7 %)     cobalamin synthesis related protein {}
1996.1  1.1      59 % (Q:100.4 %/S:101.2 %)     cobyric acid synthase (cbiP) {Methylobacterium sp. CM4}
3333.1  1.1      70 % (Q: 99.5 %/S: 99.3 %)     cobyrinic acid a,c-diamide synthase (cobB) {Rhodobacter capsulatus}
1038.1  1.1      74 % (Q: 93.7 %/S: 99.3 %)     coproporphyrinogen III oxidase (hemF) {Rickettsia prowazekii}
2351.1  1.1      71 % (Q: 97.0 %/S: 95.3 %)     delta-aminolevulinic acid dehydratase (hemB) {Rhodopseudomonas palustris}
4478.1  2.1      69 % (Q: 96.8 %/S: 94.6 %)     ferrochelatase (hemH) {Bradyrhizobium japonicum}
4686.1  2.1      53 % (Q: 92.1 %/S: 97.5 %)     glutamate-1-semialdehyde 2,1-aminotransferase (hemL) {Streptomyces coelicolor A3(2)}
3873.1  3.1     100 % (Q:100.0 %/S:100.0 %)     glutamate-1-semialdehyde aminotransferase (atrB) {Agrobacterium tumefaciens}
2206.1  1.1      66 % (Q: 98.2 %/S:100.0 %)     oxygen-independent coproporphyrinogen III oxidase (hemN) {Rickettsia prowazekii}
3454.1  1.1      58 % (Q: 99.8 %/S:100.0 %)     oxygen-independent coproporphyrinogen III oxidase (hemN) {Pseudomonas sp. G-179}
4326.1  1.1      66 % (Q: 99.7 %/S:100.0 %)     porphobilinogen deaminase (hemC) {Pisum sativum}
3341.1  1.1      75 % (Q:100.0 %/S:100.0 %)     precorrin isomerase (cobH) {Pseudomonas denitrificans}
3340.1  1.1      63 % (Q: 97.6 %/S: 97.3 %)     precorrin-2 C20 methyltransferase (cobI) {Pseudomonas denitrificans}
3339.1  1.1      66 % (Q: 98.0 %/S: 97.6 %)     precorrin-3B C17-methyltransferase (cobJ) {Pseudomonas denitrificans}
3336.1  1.1      75 % (Q: 98.4 %/S:100.0 %)     precorrin-4 C11-methyltransferase (cobM) {Pseudomonas denitrificans}
3338.1  1.1      59 % (Q: 94.6 %/S: 97.2 %)     precorrin-6x reductase (cobK) {Rhodobacter capsulatus}
3337.1  1.1      66 % (Q: 95.2 %/S: 97.1 %)     precorrin-6y methyltransferase (cobL) {Pseudomonas denitrificans}
1857.1  1.1      66 % (Q: 95.6 %/S: 96.5 %)     protoheme IX farnesyltransferase (ctaB) {Paracoccus denitrificans}
4231.1  2.1      55 % (Q: 94.5 %/S: 94.1 %)     protoporphyrinogen oxidase (hemK) {rickettsia prowazekii}
1521.1  1.1      77 % (Q: 95.1 %/S: 96.9 %)     siroheme synthase (cysG) {Rhizobium leguminosarum bv. viciae}
3704.1  2.1      42 % (Q: 94.7 %/S: 96.8 %)     siroheme synthase (cysG) {Pseudomonas aeruginosa}
3334.1  1.1      58 % (Q: 84.5 %/S: 94.1 %)     uroporphyrin-III C-methyltransferase (cobA) {Pseudomonas denitrificans}
1971.1  1.1      63 % (Q: 97.7 %/S: 98.0 %)     uroporphyrinogen decarboxylase (hemE) {Rhodobacter capsulatus}

4.5. BIOSYNTHESIS OF COFACTORS, PROSTHETIC GROUPS, AND CARRIERS/LIPOATE (2 genes)

3422.1  1.1      71 % (Q: 95.3 %/S: 89.9 %)     lipoate biosynthesis protein B {}
173.1   1.1      89 % (Q:100.0 %/S:100.3 %)     lipoic Acid Synthetase (lipA) {Rhizobium etli}

4.6. BIOSYNTHESIS OF COFACTORS, PROSTHETIC GROUPS, AND CARRIERS/MENAQUINONE AND UBIQUINONE (9 genes)

556.1   2.1      67 % (Q: 98.4 %/S: 98.8 %)     3-demethylubiquinone-9 3-methyltransferase (ubiG) {Arabidopsis thaliana}
1638.1  1.1      64 % (Q: 95.9 %/S: 93.0 %)     4-hydroxybenzoate octaprenyltransferase (ubiA) {Drosophila melanogaster}
2909.1  3.1      44 % (Q: 71.8 %/S: 74.4 %)     demethylmenaquinone methyltransferase (menG) {Streptomyces coelicolor}
869.1   1.1      69 % (Q: 88.7 %/S: 97.4 %)     geranyltranstransferase (ispA) {Zymomonas mobilis}
1625.1  1.1      72 % (Q: 94.4 %/S:100.0 %)     octaprenyl-diphosphate synthase (ispB) {Gluconobacter suboxydans}
3734.1  2.1      43 % (Q: 93.0 %/S: 92.2 %)     S-adenosylmethionine:2-demethylmenaquinone methyltransferase (menG) {Sphingomonas sp. LB126}
2212.1  1.1      71 % (Q: 99.8 %/S: 99.8 %)     ubiquinone biosynthesis protein (aarF) {Bradyrhizobium japonicum}
2211.1  1.1      75 % (Q:100.0 %/S:100.0 %)     ubiquinone/menaquinone biosynthesis methyltransferase (ubiE) {Arabidopsis thaliana}
2761.1  1.1      77 % (Q: 99.2 %/S: 91.9 %)     ubiquinone/menaquinone biosynthesis methyltransferase (ubiE) {Deinococcus radiodurans}

4.7. BIOSYNTHESIS OF COFACTORS, PROSTHETIC GROUPS, AND CARRIERS/MOLYBDOPTERIN (9 genes)

399.1   1.1      80 % (Q: 94.3 %/S: 99.4 %)     molybdenum cofactor biosynthesis protein A (moaA) {Rhodobacter capsulatus}
1622.1  1.1      78 % (Q: 92.1 %/S: 96.1 %)     molybdenum cofactor biosynthesis protein B (moaB) {Pseudomonas aeruginosa}
405.1   1.1      70 % (Q: 93.9 %/S: 95.6 %)     molybdenum cofactor biosynthesis protein C (moaC) {Rhodobacter sphaeroides}
404.1   1.1      54 % (Q: 99.0 %/S:100.0 %)     molybdopterin biosynthesis protein (moeA) {Rhodobacter sphaeroides}
1071.1  1.1      67 % (Q: 97.2 %/S: 98.4 %)     molybdopterin biosynthesis protein (moeB) {Pseudomonas stutzeri}
2383.1  1.1      60 % (Q: 98.8 %/S: 97.6 %)     molybdopterin converting factor small subunit (moaD) {Rhodobacter capsulatus}
2384.1  1.1      65 % (Q:100.0 %/S: 97.5 %)     molybdopterin converting factor, large subunit (moaE) {Rhodobacter sphaeroides}
2638.1  1.1      41 % (Q: 94.0 %/S: 98.6 %)     molybdopterin-guanine dinucleotide biosynthesis protein A (mobA) {Rhodobacter sphaeroides}
2637.1  1.1      68 % (Q: 95.9 %/S: 98.2 %)     molybdopterin-guanine dinucleotide biosynthesis protein B (mobB) {Rhodobacter sphaeroides}

4.8. BIOSYNTHESIS OF COFACTORS, PROSTHETIC GROUPS, AND CARRIERS/PANTOTHENATE (6 genes)

1139.1  2.1      58 % (Q: 97.8 %/S:100.0 %)     3-methyl-2-oxobutanoate hydroxymethyltransferase (panB) {Pseudomonas aeruginosa}
4390.1  2.1      63 % (Q: 78.1 %/S: 80.7 %)     aspartate 1-decarboxylase (panD) {Xanthomonas citri}
2268.1  1.1      65 % (Q:100.0 %/S:100.0 %)     methylenetetrahydrofolate dehydrogenase /cyclohydrolase (folD) {Methylobacterium sp. CM4}
2214.1  1.1      70 % (Q:100.7 %/S: 93.1 %)     panthotenate metabolism flavoprotein (dfp) {Bradyrhizobium japonicum}
1140.1  2.1      50 % (Q: 96.2 %/S:100.4 %)     pantoate--beta-alanine ligase (panC) {Thermotoga maritima}
1014.1  1.1      75 % (Q: 97.5 %/S: 98.4 %)     pantothenate kinase (panK) {Bacillus halodurans}

4.9. BIOSYNTHESIS OF COFACTORS, PROSTHETIC GROUPS, AND CARRIERS/PYRIDOXINE (6 genes)

4293.1  1.1      51 % (Q: 99.5 %/S: 99.0 %)     1-deoxy-D-xylulose 5-phosphate reductoisomerase (dxr) {Zymomonas mobilis}
2401.1  1.1      60 % (Q: 96.8 %/S: 96.2 %)     pyridoxal phosphate biosynthesis protein (pdxA) {Escherichia coli}
3006.1  1.1      72 % (Q: 98.4 %/S:100.4 %)     pyridoxal phosphate biosynthesis protein (pdxJ) {Porphyromonas gingivalis}
3917.1  3.1      40 % (Q:100.0 %/S: 96.1 %)     pyridoxal phosphate biosynthesis protein (pdxA) {Bacillus halodurans}
1332.1  1.1      79 % (Q:100.0 %/S:100.5 %)     pyridoxamine 5'-phosphate oxidase (pdxH) {Zymomonas mobilis}
3150.1  1.1      63 % (Q: 91.0 %/S: 96.3 %)     pyridoxamine kinase (pdxK) {Deinococcus radiodurans}

4.10. BIOSYNTHESIS OF COFACTORS, PROSTHETIC GROUPS, AND CARRIERS/PYRIDINE NUCLEOTIDES (6 genes)

4166.1  2.1      60 % (Q: 95.4 %/S: 97.3 %)     L-aspartate oxidase (nadB) {Xylella fastidiosa}
3494.1  1.1      80 % (Q:100.2 %/S:100.4 %)     NAD synthetase (nadE) {Rhodobacter capsulatus}
3583.1  1.1      78 % (Q: 98.9 %/S:100.0 %)     nicotinate phosphoribosyltransferase (pncB) {Sinorhizobium meliloti}
4165.1  2.1      73 % (Q: 93.4 %/S: 97.9 %)     nicotinate-mononucleotide pyrophosphorylase (nadC) {Xylella fastidiosa}
3320.1  1.1      69 % (Q: 93.7 %/S: 99.5 %)     nicotinate-nucleotide adenylyltransferase (nadD) {Bacillus subtilis}
4167.1  2.1      79 % (Q: 92.8 %/S: 98.8 %)     quinolinate synthetase A (nadA) {Xylella fastidiosa}

4.11. BIOSYNTHESIS OF COFACTORS, PROSTHETIC GROUPS, AND CARRIERS/RIBOFLAVIN (8 genes)

2050.1  1.1      58 % (Q: 91.5 %/S: 35.1 %)     3, 4-dihydroxy-2-butanone 4-phosphate synthase (ribB) {Synechocystis sp}
1327.1  1.1      75 % (Q: 99.7 %/S: 99.7 %)     3,4-dihydroxy-2-butanone-4-phoshate synthase/GTP cyclohydrolase II (ribA) {Arabidopsis thaliana}
139.1   1.1      39 % (Q: 64.1 %/S: 28.5 %)     bifunctional riboflavin deaminase-reductase [C-term] {}
2345.1  1.1      60 % (Q: 69.1 %/S: 66.0 %)     bifunctional riboflavin deaminase-reductase [N-term] {}
2498.1  2.1      47 % (Q: 85.1 %/S: 44.2 %)     nitrilotriacetate monooxygenase (xxxX) {Chelatobacter heintzii}
1186.1  1.1      70 % (Q:100.0 %/S:100.0 %)     riboflavin biosynthesis bifunctional protein (ribF) {Rhodobacter capsulatus}
138.1   1.1      74 % (Q: 98.0 %/S: 97.1 %)     riboflavin synthase alpha chain (ribc) {Bartonella bacilliformis}
136.1   1.1      75 % (Q: 98.6 %/S: 89.0 %)     riboflavin synthase beta chain (ribH) {Bartonella henselae}

4.12. BIOSYNTHESIS OF COFACTORS, PROSTHETIC GROUPS, AND CARRIERS/THIAMINE (10 genes)

1319.1  1.1      79 % (Q: 98.3 %/S: 98.6 %)     1-deoxy-D-xylulose-5-phosphate synthase (dxs) {Artemisia annua}
2487.1  2.1      35 % (Q:105.3 %/S: 98.9 %)     hydoxyethylthiazole kinase (xxxX) {Escherichia coli}
2485.1  2.1      66 % (Q: 99.6 %/S: 99.2 %)     phosphomethylpyrimidine kinase (thiD) {Sinorhizobium meliloti}
5550.1  1.1      69 % (Q:100.0 %/S:100.0 %)     thiamin biosynthesis protein ThiG {}
4252.1  1.1      79 % (Q:100.0 %/S: 79.6 %)     thiamin biosynthesis ThiG (thiG) {Rhizobium etli}
2488.1  2.1      54 % (Q: 98.7 %/S: 93.3 %)     thiamine biosynthesis associated protein (xxxX) {Pasteurella multocida}
4253.1  1.1      65 % (Q: 96.9 %/S: 94.3 %)     thiamine biosynthesis oxidoreductase (thiO) {Rhizobium etli}
4254.1  1.1      89 % (Q: 98.8 %/S: 98.4 %)     thiamine biosynthesis protein (thiC) {Rhizobium etli}
2486.1  2.1      36 % (Q: 98.2 %/S: 41.7 %)     thiamine-phosphate pyrophosphorylase (xxxX) {Schizosaccharomyces pombe}
4460.1  2.1      55 % (Q: 95.0 %/S: 90.9 %)     thiamine-phosphate pyrophosphorylase (thiE) {Zymomonas mobilis}

4.99. BIOSYNTHESIS OF COFACTORS, PROSTHETIC GROUPS, AND CARRIERS/OTHER (11 genes)

4346.1  1.1      54 % (Q: 97.0 %/S:100.0 %)     4a-hydroxytetrahydrobiopterin dehydratase (xxxX) {Synechocystis sp. (strain PCC 6803)}
2091.1  2.1      87 % (Q:100.0 %/S: 99.2 %)     6-pyruvoyl tetrahydropterin synthase (xxxX) {Sinorhizobium meliloti}
2052.1  1.1      48 % (Q: 98.5 %/S: 85.1 %)     cobalamin (5'-phosphate) synthase (cobS) {Pseudomonas denitrificans}
1234.1  2.1      92 % (Q: 97.6 %/S: 99.4 %)     cobalt insertion protein (cobS) {Pseudomonas denitrificans}
1251.1  1.1      68 % (Q: 96.0 %/S: 95.4 %)     cobinamide kinase/cobinamide phosphate guanylyltransferase (cobU) {Pseudomonas denitrificans}
1233.1  2.1      78 % (Q: 98.4 %/S: 99.7 %)     cobyrinic acid synthase (cobT) {Pseudomonas denitrificans}
1967.1  1.1      61 % (Q: 98.5 %/S: 97.0 %)     dephospho-CoA kinase (coaE) {Mesorhizobium loti}
2053.1  1.1      84 % (Q: 97.9 %/S: 95.6 %)     nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyl transferase (cobT) {Pseudomonas denitrificans}
1065.1  1.1      59 % (Q: 97.1 %/S: 98.5 %)     pantothenate kinase (frcK) {Sinorhizobium meliloti}
409.1   1.1      63 % (Q: 98.2 %/S: 97.0 %)     phosphopantetheine adenylyltransferase (coaD) {Pseudomonas aeruginosa (strain PAO1)}
729.1   1.1      67 % (Q: 93.9 %/S: 95.1 %)     undecaprenyl pyrophosphate synthase (uppS) {Zymomonas mobilis}

5.1. CENTRAL INTERMEDIARY METABOLISM/AMINO SUGARS (7 genes)

3772.1  2.1      66 % (Q: 99.8 %/S:100.0 %)     aldehyde dehydrogenase (attK) {Pseudomonas aeruginosa}
4278.1  1.1      33 % (Q: 97.2 %/S: 97.5 %)     beta-N-acetylhexosaminidase (xxxX) {Vibrio cholerae}
4288.1  1.1      60 % (Q: 99.7 %/S: 98.5 %)     glucosamine--fructose-6-phosphate aminotransferase (glmS) {Deinococcus radiodurans}
1279.1  1.1      79 % (Q:100.0 %/S:100.0 %)     glucosamine-fructose-6-phosphate aminotransferase (glmS) {Sinorhizobium meliloti}
1460.1  4.1      39 % (Q: 97.5 %/S: 88.9 %)     haloalkane dehalogenase (dha) {mycobacterium sp. Strain GP1}
4553.1  2.1      67 % (Q:100.0 %/S: 98.8 %)     hydantoin Racemase (xxxX) {Mesorhizobium loti}
4289.1  1.1      59 % (Q: 99.5 %/S: 99.0 %)     N-acetylglucosamine-6-phosphate deacetylase (nagA) {Xylella fastidiosa}

5.2. CENTRAL INTERMEDIARY METABOLISM/NITROGEN METABOLISM (11 genes)

1463.1  4.1      42 % (Q:100.7 %/S: 93.3 %)     nitrilotriacetate monooxygenase (nrtA) {Bradyrhizobium japonicum}
1464.1  4.1      37 % (Q: 95.2 %/S:100.0 %)     nitrilotriacetate monooxygenase (xxxX) {Streptomyces pristinaespiralis}
2722.1  1.1      86 % (Q:100.0 %/S:100.0 %)     O-succinylhomoserine sulfhydrylase (xxxX) {Rhizobium etli}
353.1   1.1      59 % (Q:102.4 %/S: 93.9 %)     urease accessory protein (ureD) {Sinorhizobium meliloti}
359.1   1.1      53 % (Q: 99.5 %/S: 98.6 %)     urease accessory protein (xxxX) {Rhizobium meliloti}
363.1   1.1      57 % (Q: 77.0 %/S: 86.0 %)     urease accessory protein (ureE) {Rhodobacter sphaeroides}
364.1   1.1      60 % (Q: 96.4 %/S: 94.3 %)     urease accessory protein (ureF) {Rhodobacter sphaeroides}
365.1   1.1      74 % (Q:100.0 %/S: 95.3 %)     urease accessory protein (ureG) {Ralstonia eutropha}
360.1   1.1      88 % (Q:100.2 %/S:100.0 %)     urease alpha subunit (ureC) {Sinorhizobium meliloti}
356.1   1.1      83 % (Q:100.0 %/S:100.0 %)     urease beta subunit (ureB) {Sinorhizobium meliloti}
354.1   1.1      90 % (Q:100.0 %/S:100.0 %)     urease gamma subunit (ureA) {Sinorhizobium meliloti}

5.3. CENTRAL INTERMEDIARY METABOLISM/PHOSPHORUS COMPOUNDS (4 genes)

2366.1  1.1      56 % (Q: 99.4 %/S: 98.6 %)     exopolyphosphatase (ppx) {Helicobacter pylori strain J99}
15000.1 1.1      69 % (Q: 95.3 %/S: 87.4 %)     exopolyphosphatase {}
4332.1  1.1      74 % (Q: 98.3 %/S: 98.3 %)     inorganic pyrophosphatase (ppa) {Bartonella bacilliformis}
2367.1  1.1      73 % (Q: 99.2 %/S: 96.5 %)     polyphosphate kinase (ppk) {Synechocystis sp}

5.4. CENTRAL INTERMEDIARY METABOLISM/POLYAMINE BIOSYNTHESIS (5 genes)

2146.1  1.1      75 % (Q: 99.4 %/S: 94.0 %)     agmatinase (speB) {Neisseria meningitidis Z2491}
4225.1  2.1      73 % (Q:100.8 %/S: 98.7 %)     carboxynorspermidine decarboxylase (nspC) {Vibrio cholerae}
195.1   1.1      50 % (Q: 98.0 %/S: 50.3 %)     glutathionylspermidine synthetase (C-terminal) (gsp*) {Escherichia coli K12}
748.1   1.1      49 % (Q: 90.1 %/S: 42.1 %)     glutathionylspermidine synthetase (N-terminal) (gsp*) {Escherichia coli}
3064.1  2.1      80 % (Q: 81.1 %/S:100.0 %)     ornithine decarboxylase (speF) {Pseudomonas aeruginosa}

5.5. CENTRAL INTERMEDIARY METABOLISM/SULFUR METABOLISM (6 genes)

1489.1  2.1      36 % (Q: 98.9 %/S: 90.3 %)     alkanesulfonate monooxygenase (ssuD) {Escherichia coli}
1487.1  2.1      70 % (Q: 95.9 %/S: 95.1 %)     desulfurizing enzyme (xxxX) {Rhodococcus sp}
2496.1  2.1      33 % (Q: 96.6 %/S: 97.6 %)     methanesulfonate sulfonatase (xxxD) {Escherichia coli}
566.1   1.1      42 % (Q: 99.3 %/S: 96.4 %)     sulfite reductase [NADPH] flavoprotein alpha-component (cysJ) {Bacillus halodurans}
1519.1  1.1      87 % (Q:100.0 %/S:100.0 %)     sulfite reductase [NADPH] hemoprotein beta-component {}
1491.1  2.1      60 % (Q: 90.5 %/S: 98.7 %)     sulfonate monooxygenase (ssuD) {Pseudomonas putida}

5.6. CENTRAL INTERMEDIARY METABOLISM/NITROGEN FIXATION (14 genes)

1303.1  1.1      81 % (Q: 99.0 %/S: 97.8 %)     aminotransferase (nifS) {Pectobacterium chrysanthemi}
1256.1  1.1      87 % (Q:100.0 %/S:100.0 %)     cytochrome C oxidase, FixO chain (fixO) {Rhizobium meliloti}
15007.1 1.1      82 % (Q:100.0 %/S:100.0 %)     cytochrome c oxidase, FixQ chain {}
1255.1  1.1      96 % (Q: 94.7 %/S:100.2 %)     cytochrome-c oxidase, FixN chain (fixN) {Agrobacterium tumefaciens}
1257.1  1.1      67 % (Q:100.0 %/S:100.0 %)     cytochrome-c oxidase, FixP chain (fixP) {Rhizobium meliloti}
2158.1  1.1      67 % (Q: 94.9 %/S: 84.6 %)     exoD protein (exoD) {Sinorhizobium meliloti}
1261.1  1.1      72 % (Q: 98.1 %/S: 98.7 %)     nitrogen fixation protein FixG (fixG) {Rhizobium meliloti}
1262.1  1.1      47 % (Q: 98.8 %/S: 98.2 %)     nitrogen fixation protein FixH (fixH) {sinorhizobium meliloti}
1263.1  1.1      66 % (Q: 96.9 %/S: 97.6 %)     nitrogen fixation protein FixI (fixI) {Rhizobium leguminosarum biovar viciae}
10069.1 1.1      73 % (Q: 74.2 %/S: 83.6 %)     nitrogen fixation protein FixS {}
1671.1  1.1      66 % (Q: 95.6 %/S: 94.5 %)     nitrogen fixation regulatory protein (fixK) {Bradyrhizobium japonicum}
2225.1  1.1      64 % (Q: 97.3 %/S: 97.8 %)     nodulation protein L (nodL) {Rhizobium meliloti}
4145.1  2.1      77 % (Q: 99.4 %/S: 99.4 %)     nodulation protein N (nodN) {Rhizobium tropici}
2474.1  2.1      81 % (Q: 98.4 %/S: 93.8 %)     short-chain alcohol dehydrogenase (fixR) {Agrobacterium tumefaciens}

5.99. CENTRAL INTERMEDIARY METABOLISM/OTHER (334 genes)

1462.1  4.1      44 % (Q: 96.9 %/S: 98.8 %)     2-deoxy-D-gluconate 3-dehydrogenase (kduD) {Escherichia coli (strain K-12)}
4602.1  2.1      67 % (Q:103.2 %/S:100.0 %)     2-deoxy-D-gluconate 3-dehydrogenase (kduD) {Escherichia coli}
669.1   3.1      54 % (Q:100.3 %/S:100.7 %)     2-hydroxyacid dehydrogenase (xxxX) {Escherichia coli}
955.1   2.1      51 % (Q: 99.0 %/S: 98.4 %)     2-hydroxyacid dehydrogenase (xxxX) {Arabidopsis thaliana}
1837.1  2.1      70 % (Q: 88.0 %/S: 94.2 %)     2-hydroxyacid dehydrogenase (xxxX) {Escherichia coli}
2292.1  3.1      37 % (Q: 98.1 %/S: 93.6 %)     2-hydroxyacid dehydrogenase (xxxX) {Escherichia coli}
2458.1  3.1      53 % (Q: 97.5 %/S:101.3 %)     2-hydroxyacid dehydrogenase (xxxX) {Vibrio cholerae}
650.1   3.1      26 % (Q: 99.0 %/S:100.5 %)     2-hydroxychromene-2-carboxylate isomerase (nahD) {Rhizobium leguminosarum bv. viciae}
1287.1  1.1      58 % (Q: 96.8 %/S: 91.5 %)     2-octaprenyl-6-methoxyphenol hydroxylase (ubiH) {Sinorhizobium meliloti}
2695.1  2.1     100 % (Q:100.0 %/S:100.0 %)     3-carboxy-cis,cis-muconate cycloisomerase (pcaB) {Agrobacterium tumefaciens}
1369.1  1.1      57 % (Q:100.0 %/S:101.6 %)     3-hydroxyacyl-CoA dehydrogenase type II (xxxX) {Pseudomonas aeruginosa}
672.1   3.1      31 % (Q: 91.5 %/S: 61.8 %)     3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase (pca) {Rhodococcus opacus}
671.1   3.1      43 % (Q: 96.9 %/S: 89.9 %)     4-carboxymuconolactone decarboxylase (xxxX) {Sulfolobus solfataricus}
2365.1  1.1      52 % (Q: 95.2 %/S: 97.6 %)     acetyl transferase (xxxX) {Yersinia enterocolitica}
248.1   1.1      40 % (Q: 97.7 %/S: 92.8 %)     acetyltranferase (xxxX) {Streptomyces coelicolor A3(2)}
238.1   1.1      39 % (Q:100.7 %/S: 98.6 %)     acetyltransferase (xxxX) {Erwinia amylovora}
240.1   1.1      52 % (Q: 86.2 %/S: 93.7 %)     acetyltransferase (xxxX) {Vibrio cholerae}
425.1   2.1      45 % (Q: 96.5 %/S: 97.4 %)     acetyltransferase (xxxX) {Pseudomonas aeruginosa}
460.1   1.1      46 % (Q: 89.3 %/S: 90.8 %)     acetyltransferase (xxxX) {Pseudomonas aeruginosa}
550.1   2.1      48 % (Q: 94.2 %/S: 87.1 %)     acetyltransferase (xxxX) {Bacillus subtilis}
677.1   3.1      61 % (Q:100.0 %/S:100.3 %)     acetyltransferase (xxxX) {Mesorhizobium loti}
799.1   1.1      33 % (Q: 83.8 %/S: 72.7 %)     acetyltransferase (xxx) {Streptomyces coelicolor A3(2)}
806.1   1.1      32 % (Q: 74.5 %/S: 71.5 %)     acetyltransferase (xxxX) {Pyrococcus horikoshii}
808.1   1.1      27 % (Q: 82.8 %/S: 83.3 %)     acetyltransferase (xxxX) {Sulfolobus shibatae}
810.1   1.1      49 % (Q: 97.6 %/S: 98.8 %)     acetyltransferase (xxxX) {Xylella fastidiosa}
811.1   1.1      43 % (Q: 94.9 %/S: 99.3 %)     acetyltransferase (xxxX) {Streptomyces coelicolor A3(2)}
1053.1  1.1      40 % (Q: 94.0 %/S: 93.4 %)     acetyltransferase (xxxX) {Amycolatopsis orientalis}
1278.1  1.1      54 % (Q: 96.4 %/S: 95.8 %)     acetyltransferase (xxxX) {Pseudomonas aeruginosa}
1399.1  1.1      30 % (Q: 84.0 %/S: 78.6 %)     acetyltransferase (xxxX) {Nostoc sp. PCC 7120}
1559.1  3.1      37 % (Q: 93.4 %/S: 85.7 %)     acetyltransferase (xxxX) {Bacillus halodurans}
1856.1  2.1      37 % (Q: 73.5 %/S: 82.6 %)     acetyltransferase {}
2180.1  1.1      57 % (Q: 99.4 %/S: 97.6 %)     acetyltransferase (xxxX) {Sinorhizobium meliloti}
2605.1  1.1      50 % (Q: 99.3 %/S: 98.0 %)     acetyltransferase (xxxX) {Azospirillum brasilense}
2990.1  1.1      55 % (Q: 97.3 %/S: 95.8 %)     acetyltransferase (xxxX) {Pseudomonas aeruginosa}
3063.1  2.1      59 % (Q: 97.4 %/S: 90.5 %)     acetyltransferase (xxxX) {Escherichia coli}
3263.1  1.1      32 % (Q: 94.7 %/S: 37.1 %)     acetyltransferase (xxxX) {Deinococcus radiodurans}
3273.1  1.1      39 % (Q: 94.9 %/S:100.0 %)     acetyltransferase (xxxX) {Rhizobium meliloti}
3324.1  1.1      37 % (Q: 75.0 %/S: 75.4 %)     acetyltransferase (xxxX) {Bacillus halodurans}
3325.1  1.1      50 % (Q: 86.2 %/S: 92.8 %)     acetyltransferase (xxxX) {Bacillus halodurans}
3539.1  1.1      39 % (Q: 97.3 %/S: 94.1 %)     acetyltransferase (xxxX) {Pseudomonas aeruginosa}
3554.1  1.1      52 % (Q: 98.3 %/S: 95.5 %)     acetyltransferase (xxxX) {Pseudomonas aeruginosa}
3647.1  2.1      32 % (Q: 77.1 %/S: 72.2 %)     acetyltransferase (xxxX) {Methanobacterium thermoautotrophicum}
4333.1  1.1      58 % (Q: 99.4 %/S: 99.4 %)     acetyltransferase (xxxX) {Bacillus subtilis}
4381.1  2.1      50 % (Q: 90.6 %/S: 82.3 %)     acetyltransferase (xxxX) {Streptomyces kasugaensis}
4620.1  2.1      30 % (Q: 92.5 %/S:105.7 %)     acetyltransferase (xxxX) {Bacillus halodurans}
4717.1  2.1      37 % (Q:100.5 %/S:102.7 %)     acetyltransferase (xxxX) {Deinococcus radiodurans}
3490.1  1.1      24 % (Q:100.7 %/S:109.1 %)     acyltransferase (xxxX) {Streptomyces mycarofaciens}
2913.1  4.1     100 % (Q: 99.3 %/S:100.0 %)     agrocinopine phosphodiesterase (accF) {Agrobacterium tumefaciens}
4524.1  2.1      35 % (Q: 98.3 %/S: 54.0 %)     agropine synthesis reductase (mas1) {Agrobacterium rhizogenes pRi8196}
258.1   3.1      40 % (Q: 97.6 %/S: 96.5 %)     alcohol dehydrogenase (adhP) {Bacillus stearothermophilus}
1618.1  1.1      84 % (Q: 98.5 %/S: 99.1 %)     alcohol dehydrogenase (adhP) {Rhizobium meliloti}
3423.1  1.1      62 % (Q: 98.0 %/S: 99.7 %)     alcohol dehydrogenase (adh) {Xylella fastidiosa}
515.1   2.1      50 % (Q: 98.3 %/S: 95.4 %)     aldehyde dehydrogenase (xxxX) {Acinetobacter sp. SE19}
674.1   3.1      43 % (Q: 96.4 %/S: 99.0 %)     aldehyde dehydrogenase (dhaS) {Bacillus subtilis}
1112.1  2.1      55 % (Q: 97.7 %/S: 95.6 %)     aldehyde dehydrogenase (xxxX) {Deinococcus radiodurans}
1121.1  2.1      73 % (Q: 98.2 %/S:100.0 %)     aldehyde dehydrogenase (dhaL) {Escherichia coli}
1839.1  2.1      80 % (Q: 90.5 %/S:100.0 %)     aldehyde dehydrogenase (xxxX) {Pseudomonas aeruginosa}
2800.1  1.1      59 % (Q: 98.1 %/S: 98.1 %)     aldehyde dehydrogenase (xxxX) {Bacillus halodurans}
3777.1  2.1      83 % (Q: 99.0 %/S:100.2 %)     aldehyde dehydrogenase (dhaS) {Bacillus subtilis}
4213.1  2.1      81 % (Q: 99.0 %/S:100.0 %)     aldehyde dehydrogenase (xxxX) {Pseudomonas aeruginosa}
1580.1  3.1      61 % (Q: 98.3 %/S: 98.8 %)     aldehyde dehydrogenase [betaine] (gbsA) {Pseudomonas aeruginosa}
2076.1  2.1      93 % (Q:100.0 %/S:100.0 %)     aldehyde dehydrogenase-like protein (xxxX) {Agrobacterium radiobacter}
20.1    1.1      66 % (Q: 99.7 %/S:100.0 %)     aldo-keto reductase {}
3683.1  2.1      44 % (Q: 88.3 %/S: 88.5 %)     aldo-keto reductase (xxxX) {Bacillus subtilis}
384.1   1.1      50 % (Q:100.0 %/S: 98.6 %)     aldo/keto reductase (xxxX) {Vibrio cholerae}
1384.1  1.1      53 % (Q: 96.0 %/S: 94.6 %)     aldo/keto reductase (xxxX) {Acinetobacter sp. M-1}
1481.1  2.1      81 % (Q: 95.7 %/S: 95.2 %)     aldo/keto reductase (mocA) {Agrobacterium tumefaciens}
1586.1  3.1      54 % (Q: 83.1 %/S: 98.6 %)     aldo/keto reductase (mocA) {Agrobacterium tumefaciens}
2998.1  1.1      56 % (Q:100.0 %/S:100.0 %)     aldo/keto reductase (xxxX) {Pseudomonas aeruginosa}
3681.1  2.1      32 % (Q: 98.9 %/S:102.6 %)     aldolase (xxxX) {Methanothermobacter thermoautotrophicus}
4571.1  2.1      58 % (Q: 99.4 %/S: 99.8 %)     alpha-L-arabinofuranosidase (xxxX) {Mesorhizobium loti}
254.1   3.1      62 % (Q: 96.2 %/S: 99.1 %)     amidase related to nicotinamidase (xxxX) {Escherichia coli K12}
166.1   1.1      48 % (Q: 90.3 %/S:101.0 %)     amide hydrolase (xxxX) {Ralstonia eutropha}
2858.1  3.1      28 % (Q: 78.8 %/S: 73.0 %)     amide hydrolase (xxxX) {Pseudomonas aeruginosa}
555.1   2.1      69 % (Q: 94.8 %/S: 94.1 %)     amidohydrolase (xxxX) {Vibrio cholerae}
1814.1  2.1      51 % (Q: 84.8 %/S: 97.3 %)     amidohydrolase (xxxX) {Escherichia coli}
2343.1  3.1      35 % (Q: 44.7 %/S: 98.9 %)     amidohydrolase (xxxX) {Pyrococcus abyssi}
3499.1  1.1      26 % (Q: 87.8 %/S: 95.4 %)     amidohydrolase (xxxX) {Caenorhabditis elegans}
3990.1  2.1      45 % (Q: 83.0 %/S: 95.3 %)     amidohydrolase (xxxX) {Pyrococcus horikoshii}
3041.1  1.1      61 % (Q: 94.5 %/S: 96.4 %)     amine oxidase, flavin-containing (xxxX) {Vibrio cholerae}
3171.1  1.1      46 % (Q: 93.6 %/S: 93.9 %)     aminopeptidase (xxxX) {Pyrococcus abyssi}
3016.1  1.1      65 % (Q: 96.9 %/S: 98.3 %)     aminotransferase (xxxX) {Deinococcus radiodurans}
3445.1  1.1      93 % (Q: 94.0 %/S:100.2 %)     aminotransferase, class I (xxxX) {Sinorhizobium meliloti}
3878.1  3.1      68 % (Q: 96.9 %/S: 95.9 %)     aminotransferase, class II (xxxX) {Bacillus subtilis}
1845.1  2.1      82 % (Q:100.0 %/S:100.0 %)     aminotransferase, class III (xxxX) {Mesorhizobium loti}
2888.1  3.1      70 % (Q: 99.5 %/S:100.0 %)     aminotransferase, class III (xxxX) {Pseudomonas cepacia}
3122.1  1.1      75 % (Q: 98.1 %/S: 99.4 %)     aromatic compounds dioxygenase (xxxX) {Bacillus subtilis}
2497.1  2.1      49 % (Q:101.3 %/S: 98.4 %)     aryl-alcohol dehydrogenase (xxxX) {Mesorhizobium loti}
2886.1  3.1      26 % (Q: 89.4 %/S: 95.7 %)     arylester hydrolase (xxxX) {Pseudomonas fluorescens}
4518.1  2.1      45 % (Q:101.9 %/S: 98.2 %)     asparaginase (asg) {Vibrio cholerae}
185.1   1.1      85 % (Q: 98.8 %/S:100.0 %)     betaine aldehyde dehydrogenase (betB) {Rhizobium meliloti}
337.1   2.1      62 % (Q:100.7 %/S: 98.1 %)     biotin carboxylase (xxxX) {Saccharopolyspora erythraea}
3558.1  1.1      43 % (Q: 96.9 %/S: 95.6 %)     carbon-nitrogen hydrolase (xxxX) {Deinococcus radiodurans}
4083.1  2.1      46 % (Q: 98.3 %/S: 97.1 %)     carbonyl reductase (cbr) {Homo sapiens}
2462.1  2.1      53 % (Q: 88.8 %/S: 91.8 %)     cellulose synthase (xxxX) {Mesorhizobium loti}
323.1   1.1      54 % (Q: 96.2 %/S: 95.8 %)     chitooligosaccharide deacetylase (xxxX) {Bacillus halodurans}
2296.1  3.1      32 % (Q: 70.4 %/S: 70.2 %)     chloromuconate cycloisomerase (xxxX) {Bacillus subtilis}
3232.1  1.1      65 % (Q:100.0 %/S:100.0 %)     d-beta-hydroxybutyrate dehydrogenase (bdhA) {Rhizobium meliloti}
1072.1  1.1      74 % (Q: 99.7 %/S:100.0 %)     D-isomer specific 2-hydroxyacid dehydrogenases family protein (xxxX) {Pseudomonas aeruginosa}
4731.1  2.1      40 % (Q: 99.0 %/S: 98.6 %)     D-tagatose 3-epimerase (xxxX) {Pseudomonas cichorii}
4733.1  2.1      31 % (Q: 98.2 %/S: 93.6 %)     D-tagatose 3-epimerase (xxxX) {Pseudomonas cichorii}
3636.1  2.1      45 % (Q: 99.7 %/S:102.7 %)     D-threo-aldose 1-dehydrogenase (fdh) {Streptomyces coelicolor}
1322.1  1.1      66 % (Q:100.0 %/S:101.0 %)     deacetylase (xxxX) {Neisseria meningitidis MC58}
319.1   1.1      40 % (Q: 96.5 %/S: 97.6 %)     dehydrogenase (xxxX) {Streptomyces coelicolor A3-2}
417.1   2.1      53 % (Q: 96.6 %/S: 94.5 %)     dehydrogenase (xxxX) {Arabidopsis thaliana}
663.1   3.1      59 % (Q: 99.2 %/S:100.4 %)     dehydrogenase (xxxX) {Bacillus subtilus}
707.1   1.1      74 % (Q: 99.7 %/S: 99.5 %)     dehydrogenase (xxxX) {Thermoplasma acidophilum}
905.1   2.1      64 % (Q: 98.1 %/S:100.0 %)     dehydrogenase (xxxX) {Rhodobacter sphaeroides}
1126.1  2.1      30 % (Q: 98.9 %/S: 89.4 %)     dehydrogenase (xxxX) {Thermotoga maritima}
1157.1  2.1      54 % (Q: 96.2 %/S: 95.5 %)     dehydrogenase (xxxX) {Pseudomonas aeruginosa}
1575.1  3.1      66 % (Q:100.0 %/S:100.0 %)     dehydrogenase (xxxX) {Streptomyces coelicolor}
1607.1  3.1      70 % (Q: 90.7 %/S: 38.4 %)     dehydrogenase (xxxX) {Escherichia coli K12}
2081.1  2.1      38 % (Q: 97.3 %/S:100.4 %)     dehydrogenase (xxxX) {Mesorhizobium loti}
2313.1  3.1      38 % (Q: 98.4 %/S:106.6 %)     dehydrogenase (xxxX) {Deinococcus radiodurans}
2380.1  1.1      58 % (Q: 93.9 %/S: 96.9 %)     dehydrogenase (xxxX) {Xylella fastidiosa}
2394.1  1.1      66 % (Q: 98.4 %/S: 97.4 %)     dehydrogenase (xxxX) {Pseudomonas fluorescens}
2515.1  2.1      51 % (Q: 91.4 %/S: 93.0 %)     dehydrogenase (xxxX) {Pseudomonas putida}
2641.1  2.1      45 % (Q: 98.0 %/S: 98.0 %)     dehydrogenase (xxxX) {Thermotoga maritima}
2662.1  2.1      51 % (Q: 98.0 %/S: 98.0 %)     dehydrogenase (xxxX) {Burkholderia cepacia}
2799.1  1.1      61 % (Q: 99.7 %/S: 97.4 %)     dehydrogenase (xxxX) {Pseudomonas aeruginosa}
2873.1  3.1      54 % (Q: 95.8 %/S: 95.2 %)     dehydrogenase (xxxX) {Bacillus subtilis}
2882.1  3.1      46 % (Q:103.3 %/S: 98.1 %)     dehydrogenase (xxxX) {Mycobacterium tuberculosis}
3101.1  2.1      50 % (Q: 90.6 %/S: 99.2 %)     dehydrogenase (xxxX) {Bacillus halodurans}
3281.1  1.1      55 % (Q:100.0 %/S: 99.2 %)     dehydrogenase (xxxX) {Pseudomonas aeruginosa}
3724.1  2.1      46 % (Q: 94.9 %/S:100.2 %)     dehydrogenase (xxxX) {Mesorhizobium loti}
4505.1  2.1      41 % (Q: 97.9 %/S: 95.6 %)     dehydrogenase (xxxX) {Streptomyces coelicolor A3(2)}
4667.1  2.1      37 % (Q: 97.4 %/S:105.6 %)     dehydrogenase (xxxX) {Sphingomonas paucimobilis}
1472.1  2.1      65 % (Q: 94.9 %/S: 96.5 %)     dibenzothiophene desulfurization enzyme B (soxB) {Paenibacillus sp}
2415.1  2.1      79 % (Q: 99.7 %/S:100.0 %)     dioxygenase (xxxX) {Bacillus subtilis}
3187.1  1.1      44 % (Q: 96.6 %/S: 95.3 %)     dioxygenase (xxxX) {Sphingomonas sp}
1141.1  2.1      39 % (Q: 93.4 %/S: 97.6 %)     Enoyl-CoA hydratase/isomerase family protein (xxxX) {Bacillus subtilis}
4349.1  1.1      53 % (Q: 99.1 %/S: 89.9 %)     esterase (xxxX) {Vibrio mimicus}
302.1   1.1      67 % (Q:100.0 %/S: 81.7 %)     FAD dependent oxidoreductase (xxxX) {Arabidopsis thaliana}
604.1   1.1      57 % (Q: 97.3 %/S: 97.7 %)     FAD dependent oxidoreductase (xxxX) {Neisseria meningitidis Z2491}
3299.1  1.1      64 % (Q: 98.6 %/S: 99.0 %)     FAD-dependent monooxygenase (xxxX) {Xylella fastidiosa}
4291.1  1.1      42 % (Q: 94.8 %/S: 87.2 %)     FAD-dependent monooxygenase (xxxX) {Mycobacterium tuberculosis}
4713.1  2.1      39 % (Q: 98.6 %/S: 91.0 %)     FAD-dependent monooxygenase (xxxX) {Ralstonia eutropha}
3296.1  1.1      79 % (Q: 87.5 %/S:100.0 %)     ferredoxin (fdxA) {Bartonella quintana}
4742.1  2.1      79 % (Q: 98.7 %/S: 99.6 %)     flavin-containing monooxygenase (xxxX) {Arabidopsis thaliana}
673.1   3.1      41 % (Q: 96.4 %/S: 99.7 %)     flavin-dependent oxidoreductase (xxxX) {Rhizobium sp. NGR234}
2613.1  1.1      63 % (Q: 89.2 %/S:100.0 %)     flavodoxin (xxxX) {Zymomonas mobilis}
3157.1  1.1      56 % (Q: 86.8 %/S: 79.1 %)     flavoprotein oxidoreductase (xxxX) {Escherichia coli}
3779.1  2.1      70 % (Q: 98.7 %/S: 96.3 %)     flavoprotein oxidoreductase (xxxX) {Sinorhizobium meliloti}
4507.1  2.1      48 % (Q:103.9 %/S:100.0 %)     glucarate dehydratase (gudD) {Streptomyces coelicolor A3(2)}
1361.1  1.1      52 % (Q:100.0 %/S:101.2 %)     gluconate dehydrogenase (xxxX) {Streptomyces coelicolor}
4115.1  2.1      49 % (Q:100.9 %/S: 82.4 %)     glucose dehydrogenase (gcd) {Xylella fastidiosa}
4273.1  1.1      64 % (Q:100.0 %/S:100.0 %)     glucosyltransferase (redB) {Sinorhizobium meliloti}
1749.1  1.1      78 % (Q:100.0 %/S:100.0 %)     glutaredoxin-related protein (grlA) {Neisseria meningitidis}
276.1   3.1      59 % (Q: 58.9 %/S: 32.5 %)     glutathione S-transferase (gstB) {Proteus mirabilis}
500.1   1.1      39 % (Q: 85.5 %/S: 96.2 %)     glutathione S-transferase (gst) {Pseudomonas pseudoalcaligenes}
1348.1  1.1      45 % (Q: 87.4 %/S: 98.2 %)     glutathione S-transferase (xxxX) {Pseudomonas aeruginosa}
1764.1  1.1      34 % (Q: 91.8 %/S: 95.0 %)     glutathione S-transferase (gst) {Synechocystis PCC 6803}
2562.1  2.1      75 % (Q: 94.6 %/S: 93.1 %)     glutathione S-transferase (xxxX) {Escherichia coli}
2869.1  3.1      30 % (Q: 98.5 %/S: 94.8 %)     glutathione S-transferase (xxxX) {Cycloclasticus oligotrophus}
3512.1  1.1      63 % (Q:100.0 %/S:100.0 %)     glutathione S-transferase (xxxX) {Azospirillum brasilense}
2378.1  1.1      52 % (Q: 94.4 %/S: 79.2 %)     glutathione S-transferase related protein (xxxX) {Actinobacillus pleuropneumoniae}
3432.1  1.1      73 % (Q: 95.2 %/S:100.3 %)     glutathione-independent formaldehyde dehydrogenase (fdhA) {Pseudomonas aeruginosa}
499.1   1.1      35 % (Q: 98.2 %/S: 99.5 %)     Glutathione-S-transferase (gst) {Synechocystis PCC 6803}
158.1   1.1      76 % (Q: 99.1 %/S: 97.3 %)     glycolate oxidase iron-sulfur subunit (glcF) {Escherichia coli}
159.1   1.1      51 % (Q: 94.5 %/S: 99.0 %)     glycolate oxidase subunit {}
1652.1  1.1      55 % (Q: 93.0 %/S: 94.5 %)     glycolate oxidase subunit {}
2153.1  1.1      55 % (Q: 96.1 %/S: 97.6 %)     glycosyl transferase (xxxX) {Streptomyces coelicolor A3(2)}
1258.1  1.1      40 % (Q: 93.8 %/S: 95.8 %)     glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein (xxxX) {Pseudomonas aeruginosa}
1259.1  1.1      53 % (Q: 91.5 %/S: 92.3 %)     glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein (xxxX) {Vibrio cholerae}
4193.1  2.1      62 % (Q: 99.1 %/S: 98.7 %)     GMC type oxidoreductase (xxxX) {Pseudomonas aeruginosa}
1051.1  1.1      79 % (Q:100.0 %/S: 95.8 %)     GTP-binding protein (xxxX) {Rhodobacter sphaeroides 2.4.1}
3110.1  2.1      53 % (Q: 93.9 %/S: 96.8 %)     haloacid dehalogenase-like hydrolase (xxxX) {Sinorhizobium meliloti}
4475.1  2.1      74 % (Q:100.0 %/S: 99.2 %)     homospermidine synthase (xxxX) {Blastochloris viridis}
4513.1  2.1      59 % (Q: 99.0 %/S: 99.6 %)     hydantoinase (xxxX) {Mesorhizobium loti}
445.1   1.1      35 % (Q: 93.7 %/S: 90.5 %)     hydrolase (xxxX) {Pseudomonas putida}
947.1   1.1      69 % (Q: 98.6 %/S: 99.5 %)     hydrolase (xxxX) {Escherichia coli}
962.1   2.1      37 % (Q:100.8 %/S: 96.4 %)     hydrolase (xxxX) {Pseudomonas sp. ADP}
1210.1  2.1      64 % (Q: 99.6 %/S: 99.1 %)     hydrolase (xxxX) {Agrobacterium rhizogenes}
1333.1  1.1      45 % (Q: 93.8 %/S: 95.0 %)     hydrolase (xxxX) {Xylella fastidiosa}
1509.1  1.1      33 % (Q: 96.8 %/S: 98.2 %)     hydrolase (xxxX) {Neisseria meningitidis}
1647.1  1.1      31 % (Q: 99.6 %/S: 99.2 %)     hydrolase (xxxX) {Medicago truncatula}
1879.1  1.1      66 % (Q: 99.5 %/S: 95.3 %)     hydrolase (xxxX) {Vibrio cholerae}
2308.1  3.1      54 % (Q: 74.0 %/S:100.0 %)     hydrolase (xxxX) {Streptomyces coelicolor A3(2)}
2416.1  2.1      94 % (Q:100.0 %/S:100.0 %)     hydrolase (xxxX) {Pseudomonas aeruginosa}
2769.1  1.1      62 % (Q: 96.2 %/S: 94.6 %)     hydrolase (xxxX) {Neisseria meningitidis MC58}
2827.1  1.1      41 % (Q: 97.2 %/S: 99.2 %)     hydrolase (xxxX) {Escherichia coli O157:H7}
2876.1  3.1      47 % (Q: 87.5 %/S: 82.0 %)     hydrolase (xxxX) {Thermotoga maritima}
2887.1  3.1      49 % (Q: 93.5 %/S: 95.7 %)     hydrolase (xxxX) {Pseudomonas aeruginosa}
3159.1  1.1      48 % (Q: 97.3 %/S: 94.8 %)     hydrolase (xxxX) {Escherichia coli K12}
3436.1  1.1      78 % (Q: 97.7 %/S: 97.7 %)     hydrolase (xxxX) {Rhizobium leguminosarum}
3536.1  1.1      34 % (Q:101.1 %/S: 97.4 %)     hydrolase (xxxX) {Streptomyces coelicolor}
3631.1  2.1      94 % (Q: 81.8 %/S: 97.8 %)     hydrolase (xxxX) {Pseudomonas aeruginosa}
3780.1  2.1      75 % (Q: 93.0 %/S: 96.0 %)     hydrolase (xxxX) {Rhodococcus opacus}
3513.1  1.1      72 % (Q: 99.7 %/S: 84.6 %)     iron-sulfur cluster binding protein (xxxX) {Pseudomonas aeruginosa}
1360.1  1.1      51 % (Q: 99.5 %/S: 99.5 %)     isomerase/lactonizing enzyme (xxxX) {Escherichia coli K12}
1469.1  2.1      32 % (Q: 94.0 %/S: 96.2 %)     isomerase/lactonizing enzyme (xxxX) {Pseudomonas aeruginosa}
1930.1  3.1      63 % (Q:100.0 %/S: 99.7 %)     isomerase/lactonizing enzyme (xxxX) {Streptomyces coelicolor A3(2)}
3125.1  1.1      40 % (Q: 94.7 %/S: 99.2 %)     lactoylglutathione lyase (lguL) {Pseudomonas aeruginosa}
3264.1  1.1      47 % (Q: 97.8 %/S: 98.5 %)     lactoylglutathione lyase (xxxX) {Deinococcus radiodurans}
2445.1  3.1      44 % (Q:100.7 %/S: 95.3 %)     lipase/esterase (xxxX) {Mycobacterium tuberculosis}
4185.1  2.1      36 % (Q: 92.8 %/S: 62.4 %)     mandelate racemase (xxxX) {Streptomyces coelicolor A3(2)}
3533.1  1.1      82 % (Q:100.0 %/S:100.0 %)     mandelate racemase / muconate lactonizing enzyme family protein (xxxX) {Streptomyces coelicolor A3(2)}
3488.1  1.1      61 % (Q:100.0 %/S:100.0 %)     mandelate racemase/muconate lactonizing enzyme family protein (xxxX) {Escherichia coli}
366.1   1.1      29 % (Q: 99.3 %/S: 84.0 %)     metal dependent hydrolase (xxxX) {Streptomyces coelicolor A3-2}
803.1   1.1      57 % (Q: 63.3 %/S:100.0 %)     metal dependent hydrolase (xxxX) {Archaeoglobus fulgidus}
1913.1  1.1      62 % (Q: 94.7 %/S: 98.9 %)     metal dependent hydrolase (xxxX) {Rickettsia prowazekii}
433.1   3.1      36 % (Q: 84.5 %/S: 84.3 %)     metallo-beta-lactamase superfamily protein (xxxX) {Streptomyces coelicolor}
1156.1  2.1      69 % (Q:100.0 %/S:100.0 %)     metallo-beta-lactamase superfamily protein (xxxX) {Xylella fastidiosa}
1615.1  1.1      41 % (Q: 83.8 %/S: 97.2 %)     metallo-beta-lactamase superfamily protein (xxxX) {Streptomyces coelicolor}
1887.1  1.1      66 % (Q: 98.0 %/S: 98.0 %)     metallo-beta-lactamase superfamily protein (xxxX) {uncultured proteobacterium}
552.1   2.1      56 % (Q: 97.6 %/S: 84.4 %)     methyltransferase (xxxX) {Drosophila melanogaster}
629.1   1.1      43 % (Q: 96.0 %/S: 94.0 %)     methyltransferase (xxxX) {Brucella melitensis}
716.1   1.1      39 % (Q: 55.0 %/S: 45.1 %)     methyltransferase (xxxX) {Streptomyces coelicolor}
1667.1  1.1      55 % (Q: 99.6 %/S: 99.6 %)     methyltransferase (xxxX) {Haemophilus influenzae Rd}
2228.1  1.1      66 % (Q: 99.5 %/S: 98.0 %)     methyltransferase (xxxX) {Sinorhizobium meliloti}
3262.1  1.1      46 % (Q: 98.0 %/S: 92.8 %)     methyltransferase (xxxX) {Vibrio cholerae}
3474.1  1.1      42 % (Q: 89.4 %/S: 98.2 %)     methyltransferase (xxxX) {Streptomyces galilaeus}
3815.1  2.1      30 % (Q: 59.7 %/S: 80.8 %)     methyltransferase (xxxX) {Thermoplasma acidophilum}
1445.1  4.1      26 % (Q: 43.4 %/S: 32.5 %)     monooxygenase (xxxX) {Rhizobium sp. NGR234}
1470.1  2.1      28 % (Q: 87.4 %/S: 87.9 %)     monooxygenase (xxxX) {Deinococcus radiodurans}
1474.1  2.1      32 % (Q: 88.7 %/S: 94.8 %)     monooxygenase (xxxX) {Pseudomonas aeruginosa}
1495.1  2.1      59 % (Q: 97.5 %/S: 98.4 %)     monooxygenase (xxxX) {Bacillus subtilis}
2108.1  2.1      53 % (Q:100.2 %/S: 99.1 %)     monooxygenase (xxxX) {Bacillus subtilis}
2333.1  3.1      86 % (Q:100.0 %/S:100.0 %)     monooxygenase (xxxX) {Pseudomonas aeruginosa}
3231.1  1.1      75 % (Q: 99.7 %/S: 99.7 %)     monooxygenase (xxxX) {Staphylococcus carnosus}
3727.1  2.1      42 % (Q: 95.0 %/S: 95.6 %)     monooxygenase (xxxX) {Pseudomonas aeruginosa}
4186.1  2.1      82 % (Q:100.0 %/S:100.0 %)     monooxygenase (xxxX) {Deinococcus radiodurans}
4394.1  2.1      43 % (Q: 96.6 %/S: 19.6 %)     monooxygenase (xxxX) {Stigmatella aurantiaca}
832.1   1.1      49 % (Q: 99.1 %/S:101.0 %)     mutT/nudix family protein (xxxX) {Schizosaccharomyces pombe}
963.1   2.1      51 % (Q: 87.1 %/S: 99.8 %)     N-ethylammeline chlorohydrolase (trzA) {Halobacterium sp. NRC-1}
440.1   3.1     100 % (Q:100.0 %/S:100.0 %)     NAD binding oxidoreductase (xxxX) {Agrobacterium tumefaciens}
3094.1  2.1      67 % (Q: 96.7 %/S: 96.7 %)     NAD binding oxidoreductase (xxxX) {Rhizobium sp.NGR234}
3475.1  1.1      38 % (Q:101.4 %/S: 97.7 %)     NAD dependent epimerase/dehydratase family protein (xxxX) {Mycobacterium tuberculosis}
1959.1  1.1      39 % (Q: 91.5 %/S: 91.5 %)     NAD(P)H-flavin oxidoreductase (xxxX) {Paenibacillus sp}
232.1   1.1      73 % (Q: 98.0 %/S:100.0 %)     NAD/NADP dependent oxidoreductase (xxxX) {Vibrio cholerae}
881.1   1.1      40 % (Q: 98.1 %/S: 91.1 %)     NAD/NADP dependent oxidoreductase (xxxX) {Pyrococcus horikoshii}
1549.1  3.1      44 % (Q: 85.7 %/S: 99.2 %)     NAD/NADP dependent oxidoreductase (xxxX) {Streptomyces coelicolor A3(2)}
2334.1  3.1      45 % (Q: 83.0 %/S: 89.2 %)     NADH-dependent FMN reductase (xxxX) {Pseudomonas aeruginosa}
4648.1  2.1      57 % (Q: 99.9 %/S:100.8 %)     NADP-dependent aldehyde dehydrogenase (xxxX) {Bacillus halodurans}
1443.1  4.1      41 % (Q:100.2 %/S: 96.2 %)     nitrilotriacetate monooxygenase (ssuD) {Bacillus subtilis}
1444.1  4.1      33 % (Q: 90.2 %/S:101.1 %)     nitrilotriacetate monooxygenase (ssuD) {Pseudomonas aeruginosa}
1471.1  2.1      82 % (Q: 98.6 %/S: 99.1 %)     nitrilotriacetate monooxygenase (xxxX) {Paenibacillus sp}
675.1   3.1      37 % (Q: 94.4 %/S: 95.3 %)     nitrilotriacetate monooxygenase component B (ntaB) {Chelatobacter heintzii}
1720.1  2.1      79 % (Q:100.0 %/S: 99.5 %)     nitroreductase (xxxX) {Bacillus subtilis}
3492.1  1.1      50 % (Q: 93.4 %/S: 72.7 %)     nitroreductase (xxxX) {Streptomyces coelicolor}
2601.1  1.1      45 % (Q: 92.3 %/S: 99.4 %)     nitroreductase family protein (xxxX) {Xylella fastidiosa}
4638.1  2.1      67 % (Q: 82.5 %/S: 19.0 %)     non-heme chloroperoxidase (xxxX) {Pseudomonas fluorescens}
4706.1  2.1      82 % (Q: 98.2 %/S: 98.9 %)     non-heme chloroperoxidase (cpo) {Burkholderia pyrrocinia}
4138.1  2.1      63 % (Q: 89.6 %/S: 95.4 %)     O-linked GlcNAc transferase (xxxX) {Synechocystis sp}
90.1    1.1      59 % (Q: 87.9 %/S: 92.5 %)     O-methyltransferase (xxxX) {Streptomyces nogalater}
4503.1  2.1      55 % (Q: 98.3 %/S:100.3 %)     oligo alginate lyase (xxxX) {Sphingomonas sp}
657.1   3.1      48 % (Q: 89.9 %/S: 94.2 %)     opine/octopine dehydrogenase (xxxX) {Agrobacterium tumefaciens}
106.1   2.1      58 % (Q: 97.9 %/S: 97.0 %)     oxidoreductase (xxxX) {Pseudomonas sp}
204.1   1.1      65 % (Q: 99.2 %/S: 99.2 %)     oxidoreductase (xxxX) {Streptomyces coelicolor}
641.1   3.1      60 % (Q:100.5 %/S: 99.7 %)     oxidoreductase (xxxX) {Bacillus subtilis}
651.1   3.1      25 % (Q: 66.5 %/S: 84.1 %)     oxidoreductase (xxxX) {Arabidopsis thaliana}
1109.1  2.1      34 % (Q: 91.5 %/S: 89.5 %)     oxidoreductase (ordL) {Mesorhizobium loti}
1114.1  2.1      49 % (Q: 98.9 %/S: 99.1 %)     oxidoreductase (xxxX) {Agrobacterium tumefaciens}
1120.1  2.1      33 % (Q: 98.7 %/S:100.7 %)     oxidoreductase (xxxX) {Pseudomonas aeruginosa}
1127.1  2.1      23 % (Q: 80.8 %/S: 83.2 %)     oxidoreductase (xxxX) {Thermotoga maritima}
1128.1  2.1      33 % (Q: 97.5 %/S: 89.9 %)     oxidoreductase (xxxX) {Streptomyces coelicolor}
1137.1  2.1      73 % (Q: 99.0 %/S: 98.7 %)     oxidoreductase (xxxX) {Streptomyces coelicolor}
1381.1  1.1      44 % (Q:100.0 %/S: 99.2 %)     oxidoreductase (xxxX) {Streptomyces coelicolor}
1585.1  3.1      32 % (Q:101.6 %/S: 94.7 %)     oxidoreductase (xxxX) {Streptomyces coelicolor}
1703.1  2.1      64 % (Q: 99.6 %/S: 99.6 %)     oxidoreductase (xxxX) {Homo sapiens}
1842.1  2.1      82 % (Q: 99.8 %/S: 99.5 %)     oxidoreductase (ordL) {Haemophilus influenzae}
1940.1  3.1      59 % (Q:100.5 %/S: 98.7 %)     oxidoreductase (xxxX) {Agrobacterium radiobacter}
1988.1  1.1      44 % (Q: 99.4 %/S:100.0 %)     oxidoreductase (xxxX) {Streptomyces coelicolor}
2137.1  1.1      45 % (Q: 97.6 %/S: 98.4 %)     oxidoreductase (xxx) {Streptomyces coelicolor A3(2)}
2280.1  1.1      67 % (Q:100.0 %/S:100.0 %)     oxidoreductase (ordL) {Rhizobium meliloti}
2312.1  3.1      58 % (Q: 93.9 %/S: 91.4 %)     oxidoreductase (xxxX) {Deinococcus radiodurans}
2646.1  2.1      81 % (Q: 98.9 %/S:100.0 %)     oxidoreductase (mocA) {Agrobacterium tumefaciens}
2841.1  1.1      97 % (Q: 99.7 %/S: 99.5 %)     oxidoreductase (xxxX) {Agrobacterium radiobacter}
3286.1  1.1      75 % (Q: 94.5 %/S: 96.7 %)     oxidoreductase (xxxX) {Saccharomyces cerevisiae}
3391.1  2.1      56 % (Q: 97.0 %/S: 96.3 %)     oxidoreductase (xxxX) {Bacillus subtilis}
3535.1  1.1      65 % (Q: 96.2 %/S: 99.7 %)     oxidoreductase (xxxX) {Rhizobium meliloti}
3538.1  1.1      59 % (Q: 91.8 %/S: 99.7 %)     oxidoreductase (xxxX) {Pseudomonas aeruginosa}
3562.1  1.1      59 % (Q: 99.0 %/S: 94.8 %)     oxidoreductase (xxxX) {Pseudomonas aeruginosa}
3602.1  1.1      59 % (Q: 96.6 %/S:100.0 %)     oxidoreductase (ordL) {Pseudomonas aeruginosa}
3629.1  2.1      69 % (Q: 99.3 %/S: 97.6 %)     oxidoreductase (xxxX) {Escherichia coli}
3726.1  2.1      50 % (Q: 97.8 %/S: 97.1 %)     oxidoreductase (yafB) {Pseudomonas aeruginosa}
4202.1  2.1      41 % (Q: 99.5 %/S:100.7 %)     oxidoreductase (xxxX) {Streptomyces coelicolor A3(2)}
4246.1  1.1      42 % (Q: 96.7 %/S: 96.5 %)     oxidoreductase (ordL) {Rhizobium meliloti}
4286.1  1.1      25 % (Q:100.3 %/S: 94.5 %)     oxidoreductase (xxxX) {Streptomyces coelicolor}
4339.1  1.1      55 % (Q: 90.7 %/S: 98.3 %)     oxidoreductase (xxxX) {Streptomyces coelicolor}
4519.1  2.1      30 % (Q: 95.7 %/S: 97.2 %)     oxidoreductase (xxxX) {Pseudomonas aeruginosa}
4523.1  2.1      53 % (Q: 94.1 %/S: 95.4 %)     oxidoreductase (agaE) {Agrobacterium tumefaciens}
4582.1  2.1      63 % (Q:100.0 %/S: 98.7 %)     oxidoreductase (xxxX) {Streptomyces coelicolor A3-2}
4608.1  2.1      68 % (Q:100.3 %/S: 98.8 %)     oxidoreductase (xxxX) {Mesorhizobium loti}
4630.1  2.1      59 % (Q: 80.5 %/S: 99.6 %)     oxidoreductase (mocA) {Agrobacterium tumefaciens A6}
4635.1  2.1      45 % (Q: 93.0 %/S: 89.7 %)     oxidoreductase (mocA) {Haloferax volcanii}
4636.1  2.1      40 % (Q: 99.3 %/S: 98.0 %)     oxidoreductase (xxxX) {Streptomyces coelicolor A3-2}
2311.1  3.1      60 % (Q: 89.8 %/S: 74.0 %)     oxidoreductase with iron-sulfur subunit (xxxX) {Deinococcus radiodurans}
1461.1  4.1      39 % (Q:100.2 %/S: 97.7 %)     oxidoreductase, GMC family (xxxX) {Sphingomonas macrogoltabidus}
3284.1  1.1      70 % (Q: 96.3 %/S: 98.6 %)     oxidoredutase (xxxX) {Pseudomonas cruciviae}
416.1   2.1      68 % (Q: 97.3 %/S: 98.9 %)     oxoreductase (xxxX) {Bacillus halodurans}
1074.1  1.1      70 % (Q:100.0 %/S: 96.2 %)     pfkB family carbohydrate kinase (xxxX) {Synechocystis sp}
1175.1  1.1      35 % (Q: 94.7 %/S: 95.5 %)     phosphatase (xxxX) {Staphylococcus carnosus}
3217.1  1.1      35 % (Q: 98.2 %/S: 94.4 %)     probable acetyltransferase (xxxX) {Pseudomonas aeruginosa}
426.1   3.1      55 % (Q: 99.8 %/S: 98.7 %)     pyridine nucleotide-disulphide oxidoreductase (xxxX) {Escherichia coli}
3472.1  1.1      38 % (Q: 87.6 %/S: 95.5 %)     pyridine nucleotide-disulphide oxidoreductase (xxxX) {Pseudomonas aeruginosa}
2849.1  3.1      51 % (Q: 96.4 %/S: 97.9 %)     pyridoxal phosphate aminotransferase (xxxX) {Arabidopsis thaliana}
4085.1  2.1      47 % (Q: 99.2 %/S: 96.8 %)     ribitol 2-dehydrogenase (rdh) {Klebsiella aerogenes}
601.1   1.1      71 % (Q: 86.8 %/S: 97.8 %)     ring hydroxylating dioxygenase, alpha-subunit (xxxX) {Pseudomonas aeruginosa}
2171.1  1.1      86 % (Q: 99.8 %/S: 99.5 %)     S-adenosylmethionine synthetase {}
1084.1  1.1      37 % (Q: 99.3 %/S:101.0 %)     S-methyltransferase (xxxX) {Agrobacterium tumefaciens}
1597.1  3.1      51 % (Q: 95.7 %/S: 97.2 %)     short chain dehydrogenase (xxxX) {Pseudomonas aeruginosa}
1601.1  3.1      50 % (Q: 98.8 %/S: 97.6 %)     short chain dehydrogenase (xxxX) {Pseudomonas aeruginosa}
2041.1  1.1      39 % (Q: 96.6 %/S: 97.7 %)     short chain dehydrogenase (xxxX) {Brevibacterium saccharolyticum}
2049.1  1.1      59 % (Q: 96.2 %/S: 94.0 %)     short chain dehydrogenase (xxxX) {Thermotoga maritima}
2568.1  2.1      60 % (Q: 97.1 %/S: 98.2 %)     short chain dehydrogenase (xxxX) {Escherichia coli}
2989.1  1.1      54 % (Q:100.4 %/S: 96.5 %)     short chain dehydrogenase (xxxX) {Zymomonas mobilis}
4504.1  2.1      43 % (Q: 98.8 %/S: 96.5 %)     short chain dehydrogenase (xxxX) {Streptomyces coelicolor}
4545.1  2.1      52 % (Q: 97.7 %/S: 95.8 %)     short chain dehydrogenase (xxxX) {Streptomyces coelicolor}
1941.1  3.1      58 % (Q: 96.6 %/S: 95.5 %)     short-chain dehydrogenase (xxxX) {Pseudomonas aeruginosa}
3739.1  2.1      36 % (Q: 94.2 %/S: 98.4 %)     short-chain dehydrogenase (xxxX) {Rhizobium sp}
4279.1  1.1      41 % (Q: 93.1 %/S: 94.9 %)     short-chain dehydrogenase (xxxX) {Streptomyces coelicolor}
4388.1  2.1      42 % (Q:101.6 %/S: 88.4 %)     short-chain dehydrogenase (ditI) {Pseudomonas abietaniphila}
4629.1  2.1      47 % (Q:100.0 %/S:100.4 %)     short-chain dehydrogenase (xxxX) {Pseudomonas aeruginosa}
3497.1  1.1      63 % (Q: 92.9 %/S: 95.4 %)     soluble pyridine nucleotide transhydrogenase (sthA) {Mycobacterium tuberculosis}
1841.1  2.1      84 % (Q: 99.0 %/S: 99.4 %)     succinate semialdehyde dehydrogenase (attK2) {Agrobacterium tumefaciens}
4719.1  2.1      53 % (Q: 97.8 %/S: 96.8 %)     succinate semialdehyde dehydrogenase (gabD) {Escherichia coli}
908.1   2.1      53 % (Q: 98.8 %/S: 98.4 %)     tagatose 6-phosphate kinase (agaZ) {Mesorhizobium loti}
2859.1  3.1      22 % (Q:106.5 %/S:100.2 %)     tannase (xxxX) {Aspergillus oryzae}
1840.1  2.1      87 % (Q: 99.7 %/S: 99.7 %)     tartrate dehydrogenase (xxxX) {Mesorhizobium loti}
2226.1  1.1      64 % (Q: 92.3 %/S: 98.3 %)     tetrapyrrole methylase family protein (xxxX) {Streptomyces coelicolor A3(2)}
1452.1  4.1      42 % (Q: 99.0 %/S: 95.5 %)     thermophilic desulfurizing enzyme (xxxX) {Pseudomonas aeruginosa PAO1}
1386.1  1.1      56 % (Q: 98.0 %/S: 98.0 %)     trans-aconitate methyltransferase (tam) {Escherichia coli}
4090.1  2.1      65 % (Q: 99.4 %/S:100.0 %)     xylitol dehydrogenase (xxxX) {Mesorhizobium loti}
662.1   3.1      29 % (Q: 84.7 %/S: 81.5 %)     zinc-binding dehydrogenase (xxxX) {Caenorhabditis elegans}
887.1   1.1      65 % (Q:100.0 %/S: 93.1 %)     zinc-binding dehydrogenase (xxxX) {Pseudomonas aeruginosa}
904.1   2.1      34 % (Q: 94.7 %/S: 97.3 %)     zinc-binding dehydrogenase (xxxX) {Streptomyces coelicolor A3(2)}
1595.1  3.1      40 % (Q: 97.6 %/S:102.2 %)     zinc-binding dehydrogenase (xxxX) {Streptomyces lividans}
1990.1  1.1      51 % (Q:100.3 %/S: 99.7 %)     zinc-binding dehydrogenase (xxxX) {Escherichia coli K12}
3115.1  2.1      56 % (Q: 97.4 %/S: 98.8 %)     zinc-binding dehydrogenase (xxxX) {Streptomyces coelicolor A3(2)}
4158.1  2.1      74 % (Q:100.0 %/S:100.0 %)     zinc-binding dehydrogenase (xxxX) {Escherichia coli}
4741.1  2.1      42 % (Q: 95.8 %/S: 98.0 %)     zinc-binding dehydrogenase (xxxX) {Bacillus halodurans}
1938.1  3.1      72 % (Q: 98.8 %/S: 98.8 %)     zinc-binding oxidoreductase (xxxX) {Streptomyces coelicolor A3(2)}
2905.1  3.1      43 % (Q: 94.6 %/S:106.7 %)     zinc-binding oxidoreductase (xxxX) {Streptomyces coelicolor}

6.2. AUTOTROPHIC METABOLISM/PHOTOAUTOTROPHY (1 genes)

1033.1  1.1      74 % (Q: 98.8 %/S: 99.4 %)     MoxR family protein (moxR) {Bacillus halodurans}

7.1. ENERGY METABOLISM/AEROBIC (14 genes)

1395.1  1.1      90 % (Q: 90.4 %/S:100.0 %)     cytochrome C-556 (xxxX) {Agrobacterium tumefaciens}
570.1   1.1      77 % (Q: 99.1 %/S: 99.4 %)     cytochrome O ubiquinol oxidase subunit I (cyoB) {Paracoccus denitrificans}
569.1   1.1      64 % (Q: 85.5 %/S: 80.5 %)     cytochrome o ubiquinol oxidase subunit II (cyoA) {Paracoccus denitrificans}
571.1   1.1      76 % (Q: 97.6 %/S: 97.6 %)     cytochrome o ubiquinol oxidase subunit III {}
125.1   1.1      62 % (Q: 96.9 %/S: 97.7 %)     cytochrome o ubiquinol oxidase subunit IV {}
2110.1  2.1      46 % (Q: 98.1 %/S: 93.6 %)     D-amino acid dehydrogenase (xxxX) {Mesorhizobium loti}
4016.1  2.1      57 % (Q:101.1 %/S: 93.9 %)     ferrienterobactin-like protein (xxxx) {Pseudomonas sp. G-179}
3682.1  2.1      32 % (Q: 98.6 %/S:102.4 %)     glycerol-3-phosphate dehydrogenase (glpD) {Synechocystis sp}
3702.1  2.1      73 % (Q: 98.8 %/S: 94.0 %)     glycerol-3-phosphate dehydrogenase (glpD) {Agrobacterium rhizogenes}
4324.1  1.1      70 % (Q: 79.5 %/S: 97.4 %)     glycerol-3-phosphate dehydrogenase [NAD(P)+] (gpsA) {Sinorhizobium meliloti}
971.1   2.1      74 % (Q: 99.2 %/S: 99.2 %)     NADH dehydrogenase I chain F (nuoF) {Ralstonia eutropha}
2231.1  1.1      61 % (Q: 98.2 %/S: 93.8 %)     NADH-ubiquinone oxidoreductase (xxxX) {Arabidopsis thaliana}
454.1   1.1      54 % (Q: 95.5 %/S: 78.8 %)     sco1 protein homolog (sco1) {Saccharomyces cerevisiae}
126.1   1.1      52 % (Q: 79.7 %/S: 97.8 %)     surfeit 1 (surf) {Rattus norvegicus}

7.2. ENERGY METABOLISM/AMINO ACIDS AND AMINES (41 genes)

1958.1  1.1      76 % (Q:100.4 %/S:100.0 %)     2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (hpcE) {Rhodobacter capsulatus}
900.1   2.1      50 % (Q: 90.5 %/S: 97.3 %)     3-hydroxyisobutyrate dehydrogenase (mmsB) {Pseudomonas cruciviae}
4194.1  2.1      69 % (Q: 96.7 %/S:100.0 %)     3-hydroxyisobutyrate dehydrogenase (mmsB) {Mycobacterium tuberculosis (strain H37RV)}
1144.1  2.1      74 % (Q: 97.7 %/S: 97.0 %)     3-methylcrotonoyl-CoA carboxylase beta subunit (mccB) {Streptomyces coelicolor A3(2)}
1143.1  2.1      49 % (Q:100.8 %/S: 93.2 %)     3-methylcrotonyl-CoA carboxylase alpha subunit (mccA) {Pseudomonas aeruginosa}
4368.1  2.1      65 % (Q: 99.7 %/S: 99.7 %)     amidohydrolase (xxxX) {Campylobacter jejuni}
2438.1  2.1      95 % (Q:100.0 %/S:100.0 %)     arginase (arcA) {Agrobacterium tumefaciens}
2981.1  4.1     100 % (Q:100.0 %/S:100.0 %)     arginase (arc) {Agrobacterium tumefaciens}
420.1   2.1      46 % (Q: 86.8 %/S: 86.5 %)     creatinine amidohydrolase (xxxX) {Synechocystis sp. PCC 6803}
3604.1  1.1      33 % (Q: 82.9 %/S: 40.0 %)     D-amino acid dehydrogenase (dadA) {Bacillus subtilis}
2482.1  2.1      66 % (Q: 99.5 %/S:100.0 %)     D-amino acid dehydrogenase, small subunit (dadA) {Pseudomonas aeruginosa}
3346.1  2.1      54 % (Q: 99.0 %/S: 93.6 %)     D-amino acid dehydrogenase, small subunit (dadA) {Rhizobium leguminosarum bv. viciae}
3605.1  1.1      28 % (Q: 70.3 %/S: 46.0 %)     D-amino acid dehydrogenase, small subunit (dadA) {Pseudomonas aeruginosa}
679.1   3.1      33 % (Q: 89.8 %/S: 88.0 %)     D-serine deaminase (dsd) {Burkholderia cepacia}
3480.1  1.1      42 % (Q:100.8 %/S:103.9 %)     dimethylglycine dehydrogenase (xxxX) {Homo sapiens}
4000.1  2.1      82 % (Q:100.3 %/S: 99.5 %)     glutaryl-CoA dehydrogenase (gcdH) {Pseudomonas aeruginosa}
1514.1  1.1      60 % (Q: 97.5 %/S: 93.6 %)     glycine cleavage system component H (gcvH) {Neisseria meningitidis Z2491}
1515.1  1.1      60 % (Q: 98.3 %/S: 97.8 %)     glycine cleavage system protein P2 (gcvP) {Pseudomonas aeruginosa}
1374.1  1.1      26 % (Q: 79.3 %/S:102.7 %)     glycine cleavage system T protein, aminomethyltransferase (gcvT) {Bacillus halodurans}
1513.1  1.1      58 % (Q:100.3 %/S: 96.0 %)     glycine cleavage system T protein, aminomethyltransferase (gcvT) {Pseudomonas aeruginosa}
1657.1  1.1      53 % (Q: 98.6 %/S: 97.2 %)     glycine cleavage system T protein, aminomethyltransferase (gcvT) {Caenorhabditis elegans}
340.1   2.1      72 % (Q: 85.5 %/S: 92.5 %)     histidase (hutH) {Sinorhizobium meliloti}
1208.1  2.1      88 % (Q: 99.2 %/S: 99.8 %)     histidine ammonia-lyase (hutH) {Agrobacterium rhizogenes}
1863.1  1.1      67 % (Q: 99.4 %/S:100.0 %)     homoserine kinase (thrB) {Zymomonas mobilis}
2457.1  3.1      63 % (Q: 99.3 %/S: 99.3 %)     hydroxypyruvate reductase (xxxX) {Pseudomonas aeruginosa}
1209.1  2.1      73 % (Q: 95.9 %/S: 96.9 %)     imidazolone-5-propionate hydrolase (hutI) {Sinorhizobium meliloti}
272.1   2.1      43 % (Q:100.3 %/S:101.0 %)     L-asparaginase (ansA) {Mycobacterium tuberculosis strain H37RV}
4243.1  1.1      64 % (Q: 95.9 %/S:100.9 %)     L-lysine 2,3-aminomutase (kamA) {Clostridium subterminale}
916.1   2.1      56 % (Q: 99.0 %/S: 97.7 %)     methionine gamma-lyase (mdeA) {Mesorhizobium loti}
3626.1  2.1      78 % (Q: 99.3 %/S: 99.3 %)     methionine gamma-lyase (mdeA) {Trichomonas vaginalis}
3591.1  1.1      92 % (Q: 96.1 %/S:100.0 %)     methylmalonate-semialdehyde dehydrogenase (mmsA) {Rhizobium leguminosarum}
1111.1  2.1      36 % (Q: 98.7 %/S: 93.9 %)     ornithine cyclodeaminase (arcB) {Methanothermobacter thermautotrophicus}
2979.1  4.1     100 % (Q: 95.4 %/S:100.0 %)     ornithine cyclodeaminase (ocd) {Agrobacterium tumefaciens}
4723.1  2.1      67 % (Q: 98.2 %/S:100.0 %)     ornithine cyclodeaminase (arcB) {Rhizobium sp. NGR234}
697.1   2.1      94 % (Q: 70.4 %/S: 46.7 %)     ornithine cyclodeaminase (C-terminal) (arcB*) {Agrobacterium tumefaciens R10}
2439.1  2.1      94 % (Q: 98.4 %/S: 53.3 %)     ornithine cyclodeaminase (N-terminal) (arcB*) {Agrobacterium tumefaciens}
4217.1  2.1      93 % (Q:100.0 %/S:100.0 %)     proline dehydrogenase (putA) {Agrobacterium tumefaciens pATR10}
2563.1  2.1      72 % (Q:100.0 %/S: 94.4 %)     propionyl-CoA carboxylase (xxxX) {Mesorhizobium loti}
439.1   3.1      95 % (Q: 98.7 %/S:100.3 %)     santhopine deaminating protein (agaE) {Agrobacterium tumefaciens C58}
4722.1  2.1      60 % (Q: 94.3 %/S: 90.1 %)     threonine dehydratase (tdcB) {Rhizobium sp}
1206.1  2.1      89 % (Q:100.7 %/S:100.0 %)     urocanase (hutU) {Agrobacterium rhizogenes}

7.3. ENERGY METABOLISM/ANAEROBIC (22 genes)

4299.1  1.1      64 % (Q: 95.2 %/S: 89.0 %)     FDHD protein (fdhD) {Sinorhizobium meliloti}
972.1   2.1      86 % (Q:100.0 %/S:100.1 %)     formate dehydrogenase alpha subunit (fdhF) {Ralstonia eutropha}
1245.1  1.1      58 % (Q: 95.1 %/S: 96.9 %)     formate dehydrogenase H alpha subunit {}
2791.1  1.1      64 % (Q: 98.7 %/S:100.3 %)     L-carnitine dehydratase (caiB) {Pseudomonas aeruginosa}
973.1   2.1      61 % (Q: 72.8 %/S: 81.4 %)     NAD-dependent formate dehydrogenase delta subunit (fdsD) {Sinorhizobium meliloti}
3705.1  2.1      50 % (Q:100.0 %/S:101.8 %)     nitrate reductase large subunit (nasA) {Klebsiella oxytoca}
4027.1  2.1      74 % (Q: 99.8 %/S:100.0 %)     nitric oxide reductase NorD protein (norD) {Alcaligenes faecalis}
4023.1  2.1      62 % (Q: 91.5 %/S: 91.5 %)     nitric oxide reductase NorE protein (norE) {Alcaligenes faecalis}
4026.1  2.1      82 % (Q:100.0 %/S: 99.3 %)     nitric oxide reductase NorQ protein (norQ) {Alcaligenes faecalis}
4025.1  2.1      87 % (Q:100.0 %/S:100.0 %)     nitric oxide reductase, cytochrome b subunit (norB) {Pseudomonas sp. G-179}
4024.1  2.1      90 % (Q:100.0 %/S:100.0 %)     nitric oxide reductase, cytochrome c-containing subunit (norC) {Alcaligenes faecalis}
3707.1  2.1      81 % (Q:100.1 %/S:100.0 %)     nitrite reductase large subunit (nirB) {Pseudomonas aeruginosa}
3706.1  2.1      77 % (Q: 92.8 %/S: 94.5 %)     nitrite reductase small subunit (nirD) {Pseudomonas aeruginosa}
4029.1  2.1      81 % (Q: 92.0 %/S:100.5 %)     nitrite reductase, copper-containing (nirK) {Pseudomonas sp. (strain G-179)}
4030.1  2.1      57 % (Q: 91.1 %/S: 94.4 %)     nitrite reductase, NirV precursor (nirV) {Pseudomonas sp}
4009.1  2.1      87 % (Q:100.0 %/S: 98.8 %)     periplasmic nitrate reductase large subunit (napA) {Pseudomonas sp. G-179}
6250.1  2.1      62 % (Q:100.0 %/S:100.0 %)     periplasmic nitrate reductase protein NapE (napE) {Pseudomonas sp}
4008.1  2.1      72 % (Q:103.1 %/S:100.6 %)     periplasmic nitrate reductase small subunit (napB) {Pseudomonas sp. G-179}
4007.1  2.1      79 % (Q: 97.4 %/S: 97.4 %)     periplasmic nitrate reductase, cytochrome c-type protein (napC) {Pseudomonas sp. G-179}
4011.1  2.1      58 % (Q: 95.8 %/S: 95.8 %)     periplasmic nitrate reductase, ferredoxin-like protein (napF) {Pseudomonas sp}
4010.1  2.1      56 % (Q:100.0 %/S:100.0 %)     periplasmic nitrate reductase, NapD protein (napD) {Pseudomonas sp. G-179}
2090.1  2.1      72 % (Q: 97.2 %/S: 99.6 %)     radical activating protein (exsD) {Sinorhizobium meliloti}

7.4. ENERGY METABOLISM/ATP-PROTON MOTIVE FORCE INTERCONVERSION (10 genes)

612.1   1.1      71 % (Q: 98.8 %/S: 97.6 %)     ATP synthase A chain (atpA) {Bradyrhizobium japonicum}
4303.1  1.1      89 % (Q:100.0 %/S:100.0 %)     ATP synthase alpha chain (atpA) {Rhodobacter capsulatus}
5429.1  1.1      56 % (Q: 97.5 %/S: 96.3 %)     ATP synthase B chain {}
610.1   1.1      55 % (Q: 98.1 %/S:100.5 %)     ATP synthase B' chain (atpB) {Brucella melitensis}
4301.1  1.1      86 % (Q: 97.7 %/S: 99.2 %)     ATP synthase beta chain (atpD) {Rhodospirillum rubrum}
611.1   1.1      92 % (Q:100.0 %/S:100.0 %)     ATP synthase C chain (atpC) {Brucella melitensis}
4304.1  1.1      72 % (Q:100.0 %/S:100.0 %)     ATP Synthase delta chain (atpH) {Rhodospirillum rubrum}
4300.1  1.1      57 % (Q:100.0 %/S:100.7 %)     ATP synthase epsilon chain (atpC) {Rhodopseudomonas blastica}
4302.1  1.1      76 % (Q:100.7 %/S:100.0 %)     ATP synthase gamma chain (atpG) {Rhodopseudomonas blastica}
613.1   1.1      50 % (Q: 84.3 %/S: 75.6 %)     ATP synthase, subunit I (atpI) {Bradyrhizobium japonicum}

7.5. ENERGY METABOLISM/ELECTRON TRANSPORT (58 genes)

476.1   1.1      56 % (Q: 96.9 %/S: 99.2 %)     cycH protein (cycH) {Rhizobium leguminosarum}
479.1   1.1      60 % (Q: 78.3 %/S:102.6 %)     cycL protein (cycL) {Rhizobium leguminosarum}
1501.1  1.1      43 % (Q: 85.0 %/S: 96.3 %)     cytochrome b561 (xxxX) {Pseudomonas aeruginosa}
835.1   1.1      57 % (Q: 95.3 %/S: 85.1 %)     cytochrome c (cycM) {Bradyrhizobium japonicum}
1858.1  1.1      58 % (Q: 73.0 %/S: 86.4 %)     cytochrome C oxidase assembly protein (coxG) {Paracoccus denitrificans}
1337.1  1.1      64 % (Q: 95.1 %/S: 82.0 %)     cytochrome c oxidase subunit II (coxB) {Bradyrhizobium japonicum}
1859.1  1.1      76 % (Q:100.0 %/S: 99.7 %)     cytochrome c oxidase subunit III (coxC) {Bradyrhizobium japonicum}
1289.1  1.1      78 % (Q: 99.2 %/S: 83.9 %)     cytochrome c-type biogenesis protein (ccdA) {Sinorhizobium meliloti}
478.1   1.1      77 % (Q: 98.3 %/S: 96.4 %)     cytochrome c-type synthesis protein (cycK) {Rhizobium leguminosarum}
1047.1  1.1      70 % (Q:100.3 %/S:101.7 %)     cytochrome c1 (fbcC) {Rhizobium galegae}
4032.1  2.1      86 % (Q: 79.9 %/S:100.0 %)     cytochrome c2 (cy2) {Agrobacterium tumefaciens (strain II Chrys)}
4106.1  2.1      46 % (Q: 75.9 %/S: 97.7 %)     cytochrome c2 (xxxX) {Agrobacterium tumefaciens (strain II Chrys)}
4162.1  2.1      78 % (Q: 99.2 %/S:100.0 %)     cytochrome d oxidase (cydA) {Brucella abortus}
4163.1  2.1      70 % (Q:100.0 %/S:100.3 %)     cytochrome d oxidase subunit II (cydB) {Brucella abortus}
2149.1  1.1      65 % (Q: 98.9 %/S: 93.4 %)     cytochrome oxidase assembly factor (cox15) {Homo sapiens}
2136.1  1.1      51 % (Q: 98.8 %/S: 98.6 %)     cytochrome P450 hydroxylase (xxxX) {Streptomyces coelicolor}
477.1   1.1      68 % (Q:100.0 %/S:100.0 %)     cytochrome-c biosynthesis heme-carrier protein cycJ (cycJ) {Rhizobium leguminosarum}
1338.1  1.1      84 % (Q: 96.3 %/S:100.2 %)     cytochrome-c oxidase chain I (coxA) {Bradyrhizobium japonicum}
2572.1  2.1      83 % (Q:100.0 %/S:100.0 %)     electron transfer flavoprotein alpha subunit (etfA) {Bradyrhizobium japonicum}
2571.1  2.1      89 % (Q:100.4 %/S:100.0 %)     electron transfer flavoprotein beta subunit (etfB) {Bradyrhizobium japonicum}
885.1   1.1      80 % (Q:100.2 %/S: 99.3 %)     electrotransfer ubiquinone oxidoreductase (xxxX) {Zymomonas mobilis}
2654.1  2.1      63 % (Q:100.0 %/S: 99.1 %)     ferredoxin (xxxX) {Bartonella quintana}
600.1   1.1      59 % (Q: 99.7 %/S: 98.4 %)     ferredoxin I (xxxX) {Pseudomonas aeruginosa}
1517.1  1.1      64 % (Q: 95.2 %/S: 93.5 %)     ferredoxin NADP+ reductase (mvrA) {Rhodobacter capsulatus}
535.1   1.1      75 % (Q:100.0 %/S:100.0 %)     ferrodoxin (fdx) {Caulobacter crescentus}
3816.1  2.1      64 % (Q: 91.2 %/S: 96.2 %)     flavodoxin (wrbA) {Escherichia coli}
554.1   2.1      63 % (Q: 84.0 %/S: 94.4 %)     glutaredoxin (grx) {Pseudomonas aeruginosa}
1180.1  1.1      45 % (Q: 97.7 %/S: 97.5 %)     glutathione-regulated potassium-efflux system protein (kefB) {Escherichia coli}
3155.1  1.1      81 % (Q:100.0 %/S:100.2 %)     NAD(P)+ transhydrogenase (pntA) {Neisseria meningitidis}
3156.1  1.1      79 % (Q:101.0 %/S:100.8 %)     NAD(P)+ transhydrogenase beta chain (pntB) {Haemophilus influenzae (strain Rd KW20)}
3007.1  1.1      68 % (Q: 97.4 %/S: 96.7 %)     NADH dehydrogenase (ndh) {Calothrix viguieri}
970.1   2.1      61 % (Q: 99.4 %/S: 99.4 %)     NADH dehydrogenase I chain E (nuoE) {Ralstonia eutropha}
93.1    1.1      78 % (Q: 99.2 %/S: 99.6 %)     NADH dehydrogenase I chain M {}
2128.1  1.1      91 % (Q: 94.0 %/S: 98.4 %)     NADH ubiqionone oxidoreductase chain B (nuoB) {Rhizobium meliloti}
2129.1  1.1      91 % (Q: 99.2 %/S: 99.2 %)     NADH ubiquinone oxidoreductase chain A (nuoA) {Sinorhizobium meliloti}
2127.1  1.1      76 % (Q: 99.5 %/S: 99.0 %)     NADH ubiquinone oxidoreductase chain C (nuoC) {Sinorhizobium meliloti}
2125.1  1.1      87 % (Q:100.0 %/S:100.0 %)     NADH ubiquinone oxidoreductase chain D (nouD) {Rhizobium meliloti}
2124.1  1.1      62 % (Q:114.6 %/S: 99.8 %)     NADH ubiquinone oxidoreductase chain E (nuoE) {Sinorhizobium meliloti}
2123.1  1.1      82 % (Q:100.0 %/S:100.0 %)     NADH ubiquinone oxidoreductase chain F (nuoF) {Rhizobium meliloti}
2122.1  1.1      78 % (Q:100.0 %/S:100.0 %)     NADH ubiquinone oxidoreductase chain G (nuoG) {Paracoccus denitrificans}
2120.1  1.1      86 % (Q:100.0 %/S: 99.4 %)     NADH ubiquinone oxidoreductase chain I (nuoI) {Arabidopsis thaliana}
2119.1  1.1      72 % (Q: 99.5 %/S: 98.5 %)     NADH ubiquinone oxidoreductase chain J (nuoJ) {Rhodobacter capsulatus}
2118.1  1.1      88 % (Q:100.0 %/S:100.0 %)     NADH ubiquinone oxidoreductase chain K (nuoK) {Rhodobacter capsulatus}
92.1    1.1      75 % (Q: 99.2 %/S:100.5 %)     NADH ubiquinone oxidoreductase chain L (nuoL) {Paracoccus denitrificans}
95.1    1.1      68 % (Q:100.0 %/S:100.4 %)     NADH ubiquinone oxidoreductase chain N (nuoN) {Paracoccus denitrificans}
2121.1  1.1      72 % (Q: 99.7 %/S:100.0 %)     NADH ubiquinone oxidoreductase I chain H (nuoH) {Rhodobacter capsulatus}
4633.1  2.1      49 % (Q:100.3 %/S:100.0 %)     NADP-dependent quinone oxidoreductase (xxxX) {Caulobacter crescentus}
3158.1  1.1      70 % (Q: 99.5 %/S: 99.5 %)     nitroreducatase (xxxX) {Escherichia coli}
1832.1  2.1      51 % (Q: 69.2 %/S: 68.2 %)     pseudoazurin (xxxX) {Achromobacter cycloclastes}
3212.1  1.1      56 % (Q: 99.3 %/S:100.7 %)     pseudoazurin (xxxX) {Achromobacter cycloclastes}
188.1   1.1      55 % (Q: 99.7 %/S:100.0 %)     quinone oxidoreductase (qor) {Streptomyces coelicolor}
1600.1  3.1      36 % (Q:101.0 %/S: 96.9 %)     quinone oxidoreductase (qor) {Vigna unguiculata}
1861.1  1.1      59 % (Q: 84.5 %/S: 86.9 %)     surfeit 1 (surf1) {Rattus norvegicus}
4416.1  2.1      52 % (Q:105.3 %/S:101.2 %)     thioredoxin (trxA) {Pseudomonas aeruginosa}
1950.1  1.1      83 % (Q:100.0 %/S:100.0 %)     thioredoxin C-1 (trxA) {Corynebacterium nephridii}
2164.1  1.1      63 % (Q: 59.8 %/S: 96.6 %)     thiosulfate sulfurtransferase (xxxX) {Datisca glomerata}
1046.1  1.1      87 % (Q:102.3 %/S: 98.4 %)     ubiquinol-cytochrome c reductase cytochrome b subunit (fbcB) {Rhizobium galegae}
1045.1  1.1      86 % (Q:100.0 %/S:100.0 %)     ubiquinol-cytochrome C reductase iron-sulfur subunit (fbcF) {Rhizobium galegae}

7.6. ENERGY METABOLISM/ENTNER-DOUDOROFF (3 genes)

1169.1  1.1      55 % (Q: 97.6 %/S: 96.2 %)     KHG-KDPG bifunctional aldolase (kdgA) {Thermotoga maritima}
1727.1  2.1      63 % (Q: 99.5 %/S: 97.7 %)     KHG-KDPG bifunctional aldolase (kdgA) {Streptomyces coelicolor A3(2)}
2277.1  1.1      80 % (Q:100.0 %/S:100.0 %)     phosphogluconate dehydratase (edd) {Rhizobium meliloti}

7.7. ENERGY METABOLISM/FERMENTATION (12 genes)

4156.1  2.1      83 % (Q: 92.3 %/S: 98.0 %)     2-HYDROXY-3-OXOPROPIONATE REDUCTASE (garR) {Escherichia coli}
4124.1  2.1      37 % (Q: 94.8 %/S: 95.1 %)     2-hydroxyacid dehydrogenase (xxxX) {Escherichia coli}
3730.1  2.1      48 % (Q:100.6 %/S: 82.0 %)     alcohol dehydrogenase (adhC) {Mycobacterium tuberculosis}
3502.1  1.1      92 % (Q: 94.0 %/S:100.0 %)     alcohol dehydrogenase class III (adhC) {Sinorhizobium meliloti}
1582.1  3.1      51 % (Q: 98.7 %/S: 99.7 %)     alcohol dehydrogenase [benzyl] (xylB) {Pseudomonas putida}
3675.1  2.1      59 % (Q: 95.0 %/S: 97.3 %)     D-lactate dehydrogenase (ldhA) {Pseudomonas aeruginosa}
4708.1  2.1      58 % (Q: 99.5 %/S: 99.7 %)     formate dehydrogenase alpha subunit (fdhF) {Ralstonia eutropha}
3916.1  3.1      42 % (Q: 87.9 %/S: 84.8 %)     iron alcohol dehydrogenase (attL) {Pseudomonas aeruginosa}
3240.1  1.1      78 % (Q: 98.4 %/S: 99.5 %)     L-lactate dehydrogenase (lldA) {Pseudomonas aeruginosa}
3676.1  2.1      83 % (Q: 99.7 %/S: 99.7 %)     L-lactate dehydrogenase (lldA) {Pseudomonas aeruginosa}
2557.1  2.1      83 % (Q: 99.4 %/S: 99.6 %)     methylmalonyl-CoA mutase (mutA) {Sinorhizobium meliloti}
3449.1  1.1      82 % (Q: 99.7 %/S: 99.7 %)     NADPH:quinone reductase (xxxX) {Halobacterium sp. NRC-1}

7.8. ENERGY METABOLISM/GLYCOLYSIS-GLUCONEOGENESIS (16 genes)

1152.1  2.1      51 % (Q:101.0 %/S: 99.2 %)     2,3-Bisphosphoglycerate-Independent phosphoglycerate mutase (pgm) {Escherichia coli}
1378.1  1.1      82 % (Q:100.0 %/S: 92.7 %)     enolase (eno) {Zymomonas mobilis}
4452.1  2.1      65 % (Q:100.9 %/S:100.6 %)     fructose bisphosphate aldolase (xxxX) {Arabidopsis thaliana}
3612.1  1.1      63 % (Q: 99.1 %/S:100.0 %)     glucokinase (glk) {Brucella abortus}
2749.1  1.1      71 % (Q: 97.6 %/S: 96.5 %)     glucose-6-phosphate isomerase (pgi) {Sus scrofa}
4449.1  2.1      81 % (Q: 99.4 %/S: 99.7 %)     Glyceraldehyde 3-Phosphate Dehydrogenase (gapA) {Xanthobacter flavus}
2588.1  1.1      72 % (Q: 95.7 %/S:100.0 %)     L-serine dehydratase (sdaA) {Streptomyces coelicolor A3(2)}
1012.1  1.1      77 % (Q: 95.5 %/S:100.0 %)     phosphoenolpyruvate carboxykinase (pckA) {Sinorhizobium meliloti}
4451.1  2.1      79 % (Q: 99.0 %/S: 99.5 %)     phosphoglycerate kinase (pgk) {Brucella abortus}
1329.1  1.1      55 % (Q: 99.5 %/S:100.0 %)     phosphoglycerate mutase (gpmB) {Arabidopsis thaliana}
4494.1  2.1      44 % (Q: 74.7 %/S: 34.4 %)     phosphoglyceromutase (gpmB) {Escherichia coli K12}
4495.1  2.1      41 % (Q: 97.9 %/S: 47.7 %)     phosphoglyceromutase (xxxX) {Caulobacter crescentus}
189.1   1.1      59 % (Q: 82.3 %/S: 96.1 %)     pyrophosphate--fructose-6-phosphate 1-phosphotransferase (pfp) {Mastigamoeba balamuthi}
4469.1  2.1      77 % (Q: 99.4 %/S: 99.6 %)     pyruvate kinase (pykA) {Methylobacterium extorquens}
1884.1  1.1      79 % (Q: 93.8 %/S: 98.4 %)     pyruvate,orthophosphate dikinase (ppdK) {Sinorhizobium meliloti}
3470.1  1.1      57 % (Q: 99.6 %/S: 99.6 %)     triosephosphate isomerase (tpiA) {Xanthobacter flavus}

7.9. ENERGY METABOLISM/METHANOGENESIS (1 genes)

3790.1  2.1      88 % (Q:100.0 %/S:100.0 %)     formyl-methanofuran dehydrogenase (fwdC) {Sinorhizobium meliloti}

7.10. ENERGY METABOLISM/PENTOSE PHOSPHATE PATHWAY (13 genes)

4661.1  2.1      72 % (Q:100.3 %/S: 99.1 %)     6-phosphogluconate dehydrogenase (xxxX) {Mycobacterium tuberculosis strain H37RV}
2278.1  1.1      65 % (Q: 78.4 %/S: 96.8 %)     6-phosphogluconolactonase (pgl) {Rhizobium meliloti}
4107.1  2.1      75 % (Q: 86.8 %/S: 99.3 %)     gluconolactonase precursor (xxxX) {Streptomyces coelicolor A3-2}
4660.1  2.1      68 % (Q: 98.5 %/S: 95.6 %)     glucose 6-phosphate dehydrogenase (xxxX) {Mesorhizobium loti}
2279.1  1.1      83 % (Q: 99.8 %/S: 99.8 %)     glucose-6-phosphate 1-dehydrogenase (zwf) {Rhizobium meliloti}
1534.1  1.1      64 % (Q: 98.3 %/S: 96.6 %)     ISPD/ISPF bifunctional enzyme (ispF) {Rhodobacter capsulatus}
1264.1  1.1      70 % (Q: 99.4 %/S: 99.6 %)     phosphogluconate dehydrogenase, decarboxylating (gnd) {Bacillus subtilis}
3463.1  1.1      72 % (Q: 99.6 %/S: 92.6 %)     ribose 5-phosphate isomerase (rpiA) {Pyrococcus abyssi}
1739.1  1.1      68 % (Q: 98.2 %/S: 98.2 %)     ribulose-phosphate 3-epimerase (rpe) {Rhodobacter capsulatus}
1701.1  2.1      62 % (Q: 94.7 %/S: 99.0 %)     transaldolase (talB) {Kluyveromyces lactis}
2044.1  1.1      40 % (Q: 95.9 %/S: 96.5 %)     transketolase (tkt) {Thermoplasma acidophilum}
2045.1  1.1      43 % (Q: 99.6 %/S: 98.2 %)     transketolase (tktB) {Thermoplasma acidophilum}
4448.1  2.1      69 % (Q:100.0 %/S: 96.6 %)     transketolase (tktA) {Xanthobacter flavus}

7.11. ENERGY METABOLISM/POLYSACCHARIDES (13 genes)

3223.1  1.1      45 % (Q: 98.6 %/S: 95.1 %)     2-dehydro-3-deoxygluconokinase (kdgK) {Escherichia coli}
336.1   2.1      62 % (Q: 99.0 %/S: 99.0 %)     alpha-amylase (amyA) {Escherichia coli K12}
2878.1  3.1      45 % (Q: 81.7 %/S: 83.4 %)     alpha-amylase (xxxX) {Pseudomonas aeruginosa (strain PAO1)}
3222.1  1.1      66 % (Q: 92.6 %/S: 98.7 %)     alpha-glucosidase (aglA) {Sinorhizobium meliloti}
1090.1  1.1      34 % (Q: 94.4 %/S: 82.7 %)     endo-1,4-beta-xylanase (xynA) {Acidobacterium capsulatum}
4150.1  2.1      97 % (Q:100.0 %/S:100.1 %)     glycogen branching enzyme (glgB) {Agrobacterium tumefaciens}
4146.1  2.1      65 % (Q:100.8 %/S:100.0 %)     glycogen debranching enzyme (glgX) {Rhizobium tropici}
4151.1  2.1      99 % (Q:100.1 %/S:100.0 %)     glycogen phosphorylase (glgP) {Agrobacterium tumefaciens}
2879.1  3.1      49 % (Q: 89.8 %/S: 99.2 %)     glycogen synthase (glgA) {Agrobacterium tumefaciens}
4148.1  2.1     100 % (Q:100.0 %/S:100.0 %)     glycogen synthase (glgA) {Agrobacterium tumefaciens}
2627.1  1.1      60 % (Q: 81.9 %/S: 97.6 %)     glycosyl hydrolase (xxxX) {Zymomonas mobilis}
1692.1  2.1      64 % (Q: 93.7 %/S:100.0 %)     mannitol 2-dehydrogenase (mtlK) {Rhodobacter sphaeroides}
635.1   1.1      32 % (Q: 96.0 %/S: 93.4 %)     polysaccharide deacetylase (xxxX) {Bacillus halodurans}

7.12. ENERGY METABOLISM/PYRUVATE DEHYDROGENASE (5 genes)

170.1   1.1      79 % (Q:100.2 %/S: 90.8 %)     dihydrolipoamide acetyltransferase (aceF) {Rhizobium meliloti}
172.1   1.1      78 % (Q:100.0 %/S:100.0 %)     dihydrolipoamide dehydrogenase (lpdA) {Klebsiella pneumoniae}
4309.1  1.1      79 % (Q:100.0 %/S:100.0 %)     dihydrolipoamide dehydrogenase (lpdA) {Trypanosoma brucei}
1379.1  1.1      91 % (Q:100.0 %/S: 87.9 %)     pyruvate dehydrogenase alpha subunit (pdhA) {Rhizobium meliloti}
169.1   1.1      84 % (Q:100.0 %/S:102.8 %)     pyruvate dehydrogenase beta subunit {}

7.13. ENERGY METABOLISM/SUGARS (48 genes)

1168.1  1.1      49 % (Q: 98.0 %/S: 46.1 %)     2-dehydro-3-deoxygalactonate kinase (dgoK) {Escherichia coli K12}
867.1   1.1      48 % (Q:100.3 %/S:100.0 %)     aldose 1-epimerase (galM) {Thermotoga maritima}
4155.1  2.1      50 % (Q: 95.4 %/S: 79.2 %)     aldose epimerase (galM) {Agrobacterium tumefaciens}
3360.1  2.1      87 % (Q: 99.8 %/S: 98.9 %)     alpha-galactosidase (melA) {Escherichia coli}
3365.1  2.1      89 % (Q: 99.8 %/S: 99.8 %)     alpha-galactosidase (melA) {Sinorhizobium meliloti}
1991.1  1.1      31 % (Q: 97.6 %/S: 71.9 %)     altronate oxidoreductase (uxaB) {Bacillus halodurans}
2914.1  4.1      99 % (Q:100.0 %/S:100.0 %)     arabinose phosphate phosphatase (accG) {Agrobacterium tumefaciens}
1768.1  1.1      45 % (Q: 99.7 %/S: 99.4 %)     carbohydrate kinase (xxxX) {Deinococcus radiodurans}
3374.1  2.1      32 % (Q: 94.6 %/S: 71.0 %)     carbohydrate kinase (xxxX) {Streptomyces coelicolor A3(2)}
1983.1  1.1      53 % (Q: 97.9 %/S:102.4 %)     D-galactarate dehydratase (garD) {Bacillus subtilis}
907.1   2.1      53 % (Q: 91.3 %/S: 96.5 %)     fructokinase (scrK) {Mesorhizobium loti}
2751.1  1.1      78 % (Q: 90.6 %/S: 85.6 %)     fructokinase (scrK) {Rhizobium leguminosarum bv. trifolii}
4157.1  2.1      86 % (Q: 83.2 %/S: 98.8 %)     gluconate 5-dehydrogenase (idnO) {Gluconobacter oxydans}
3601.1  1.1      56 % (Q: 97.5 %/S: 92.4 %)     gluconokinase (gntK) {Deinococcus radiodurans}
4199.1  2.1      71 % (Q:100.1 %/S: 99.2 %)     glucose dehydrogenase (gcd) {Pseudomonas aeruginosa}
4149.1  2.1      99 % (Q:100.0 %/S:100.0 %)     glucose-1-phosphate adenylyltransferase (glgC) {Agrobacterium tumefaciens}
2490.1  2.1      48 % (Q:100.5 %/S: 98.4 %)     glycosidase (xxxX) {Salmonella typhimurium}
3680.1  2.1      34 % (Q:101.6 %/S:100.4 %)     L-xylulose kinase (lyxK) {Klebsiella pneumoniae}
2517.1  2.1      52 % (Q: 85.5 %/S: 84.0 %)     mannitol dehydrogenase (uxuB) {Pseudomonas aeruginosa}
107.1   2.1      55 % (Q: 98.2 %/S: 99.0 %)     mannonate dehydratase {}
3116.1  2.1      54 % (Q: 98.3 %/S:100.3 %)     mannonate dehydratase (uxuA) {Escherichia coli}
3395.1  2.1      29 % (Q: 89.9 %/S: 88.8 %)     mannonate dehydratase (uxuA) {Thermoplasma acidophilum}
2099.1  2.1      48 % (Q: 99.6 %/S:100.6 %)     mannose-1-phosphate guanylyltransferase (GDP) (manC) {Salmonella enterica}
695.1   2.1      70 % (Q: 99.7 %/S: 99.7 %)     myo-inositol 2-dehydrogenase (idhA) {Rhizobium meliloti}
2679.1  2.1      55 % (Q:100.6 %/S: 98.3 %)     myo-inositol 2-dehydrogenase (iolG) {Bacillus halodurans}
412.1   2.1      55 % (Q:100.3 %/S: 99.7 %)     myo-inositol catabolism IolC protein (iolC) {Bacillus subtilis}
640.1   3.1      48 % (Q: 98.0 %/S:100.0 %)     myo-inositol catabolism protein (iolH) {Bacillus halodurans}
2680.1  2.1      45 % (Q: 97.0 %/S: 98.3 %)     myo-inositol catabolism protein (iolH) {Bacillus halodurans}
3285.1  1.1      85 % (Q: 99.7 %/S:100.0 %)     nucleoside-diphosphate-sugar epimerase (xxxX) {Alcaligenes eutrophus}
4425.1  2.1      75 % (Q: 98.3 %/S:100.0 %)     phosphoglucomutase/phosphomannomutase (mrsA) {Escherichia coli}
2465.1  2.1      59 % (Q: 95.9 %/S: 97.7 %)     phosphomannose isomerase (xxxX) {Rhizobium meliloti}
1694.1  2.1      62 % (Q:100.4 %/S: 99.8 %)     ribitol kinase (xxxX) {Mesorhizobium loti}
4084.1  2.1      59 % (Q: 98.3 %/S: 98.7 %)     ribitol kinase (xxxX) {Escherichia coli}
2782.1  1.1      68 % (Q: 99.0 %/S: 98.7 %)     ribokinase (rbsK) {Rhizobium etli}
4539.1  2.1      39 % (Q:101.3 %/S: 99.7 %)     ribokinase (xxxX) {Mesorhizobium loti}
4650.1  2.1      53 % (Q: 95.8 %/S: 95.2 %)     ribokinase (rbsk) {Pseudomonas aeruginosa}
1362.1  1.1      58 % (Q: 99.1 %/S:100.3 %)     sorbitol dehydrogenase (gutB) {Streptomyces coelicolor A3(2)}
709.1   1.1      32 % (Q: 89.5 %/S:101.9 %)     sucrose hydrolase (cscA) {Escherichia coli}
118.1   4.1      99 % (Q:100.0 %/S:100.0 %)     sucrose phosphorylase (splA) {Agrobacterium tumefaciens C58}
510.1   2.1      52 % (Q: 99.3 %/S: 92.8 %)     sugar kinase (xxxX) {Mycobacterium tuberculosis}
3170.1  1.1      47 % (Q: 91.2 %/S: 94.2 %)     sugar kinase (xxxX) {Escherichia coli}
1784.1  1.1      60 % (Q: 96.5 %/S: 99.4 %)     UDP-galactose 4-epimerase (galE) {Bradyrhizobium japonicum}
1925.1  3.1      66 % (Q: 96.3 %/S: 96.6 %)     UDP-glucose 4-epimerase (galE) {Streptomyces coelicolor A3(2)}
2461.1  2.1      58 % (Q: 98.5 %/S: 93.9 %)     UDP-glucose 4-epimerase (galE) {Rhizobium leguminosarum}
4687.1  2.1      50 % (Q: 95.8 %/S:100.0 %)     UDP-glucose 4-epimerase (galE) {Streptomyces coelicolor A3(2)}
4482.1  2.1      71 % (Q: 97.6 %/S: 95.7 %)     UTP-glucose-1-phosphate uridylyltransferase (galU) {Rhizobium meliloti}
1718.1  2.1      78 % (Q:101.1 %/S:100.0 %)     xylose isomerase (xylA) {Escherichia coli K12}
1717.1  2.1      78 % (Q: 99.2 %/S: 99.2 %)     xylulokinase (xylB) {Klebsiella pneumoniae}

7.14. ENERGY METABOLISM/TCA CYCLE (27 genes)

4354.1  1.1      81 % (Q:100.0 %/S:100.1 %)     aconitate hydratase (acnA) {Bradyrhizobium japanicum}
4745.1  2.1      31 % (Q: 99.8 %/S:107.2 %)     aconitate hydratase 2 (acnB) {Escherichia coli K12}
3329.1  1.1      51 % (Q: 98.6 %/S: 97.6 %)     citrate lyase, beta subunit (citE) {Deinococcus radiodurans}
1346.1  1.1      88 % (Q:100.0 %/S:100.0 %)     citrate synthase (cisY) {Sinorhizobium meliloti}
2890.1  3.1      56 % (Q:100.9 %/S: 95.3 %)     citrate synthase (cis) {Pyrococcus furiosus}
2891.1  3.1      50 % (Q: 89.9 %/S:100.5 %)     citrate synthase (cisZ) {Streptomyces coelicolor}
4646.1  2.1      49 % (Q: 86.6 %/S: 74.7 %)     citrate synthase (cisZ) {Streptomyces coelicolor}
4311.1  1.1      81 % (Q:100.2 %/S:100.7 %)     dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex (sucB) {Brucella melitensis}
3466.1  1.1      84 % (Q: 93.0 %/S: 99.8 %)     fumarate hydratase (fumC) {Schizosaccharomyces pombe}
3093.1  2.1      71 % (Q: 99.1 %/S: 95.7 %)     hydroxypyruvate reductase (xxxX) {Agrobacterium vitis}
1763.1  1.1      86 % (Q: 88.6 %/S:100.0 %)     isocitrate dehydrogenase [NADP] (icdA) {Sinorhizobium meliloti}
2284.1  1.1      90 % (Q: 98.8 %/S:100.0 %)     isocitrate lyase (aceA) {Caenorhabditis elegans}
292.1   1.1      37 % (Q: 85.5 %/S: 88.6 %)     malate dehydrogenase (mdh) {Pseudomonas aeruginosa}
3076.1  2.1      32 % (Q:100.6 %/S: 85.9 %)     malate dehydrogenase (xxxX) {Bacillus subtilis}
3351.1  2.1      51 % (Q: 96.2 %/S: 99.4 %)     malate dehydrogenase (mdh) {Pseudomonas aeruginosa}
4315.1  1.1      91 % (Q:100.0 %/S:100.0 %)     malate dehydrogenase (mdh) {Rhizobium leguminosarum}
1888.1  1.1      67 % (Q: 82.2 %/S: 89.2 %)     malate:quinone oxidoreductase (mqo) {Escherichia coli K12}
2102.1  2.1      81 % (Q: 99.9 %/S:100.0 %)     NADP-dependent malic enzyme (xxxX) {Sinorhizobium meliloti}
3491.1  1.1      81 % (Q: 99.1 %/S: 99.9 %)     NADP-dependent malic enzyme (maeB) {Sinorhizobium meliloti}
4312.1  1.1      87 % (Q: 98.2 %/S: 99.9 %)     oxoglutarate dehydrogenase E1 component (sucA) {Bradyrhizobium japonicum}
3276.1  1.1      89 % (Q: 98.1 %/S: 99.8 %)     pyruvate carboxylase (pycA) {Rhizobium etli}
4321.1  1.1      65 % (Q: 94.6 %/S: 88.5 %)     succinate dehydrogenase cytochrome B-556 subunit (sdhC) {Bradyrhizobium japonicum}
4319.1  1.1      84 % (Q: 98.5 %/S:100.3 %)     succinate dehydrogenase flavoprotein subunit (sdhA) {Paracoccus denitrificans}
4320.1  1.1      66 % (Q: 99.2 %/S: 94.7 %)     succinate dehydrogenase hydrophobic membrane anchor (sdhD) {Bradyrhizobium japonicum}
4318.1  1.1      88 % (Q:100.0 %/S:100.0 %)     succinate dehydrogenase iron-sulfur (sdhB) {Bradyrhizobium japonicum}
4313.1  1.1      88 % (Q:100.0 %/S:100.0 %)     succinyl-CoA synthetase alpha chain (sucD) {Bacillus halodurans}
4314.1  1.1      83 % (Q:100.0 %/S: 99.7 %)     succinyl-CoA synthetase beta chain (sucC) {Bacillus subtilis}

7.15. ENERGY METABOLISM/GLYOXYLATE BYPASS (4 genes)

1227.1  2.1      59 % (Q: 98.8 %/S: 99.2 %)     glyoxalase II (gloB) {Arabidopsis thaliana}
1291.1  1.1      67 % (Q: 98.7 %/S: 90.9 %)     lactoylglutathione lyase (gloA) {Vibrio cholerae}
2556.1  2.1      73 % (Q: 96.4 %/S: 99.3 %)     lactoylglutathione lyase (gloA) {Caenorhabditis elegans}
1024.1  1.1      76 % (Q: 96.5 %/S: 99.6 %)     malate synthase G (glcB) {Pseudomonas aeruginosa}

7.99. ENERGY METABOLISM/OTHER (52 genes)

2643.1  2.1      61 % (Q: 98.9 %/S: 99.3 %)     2-hydroxyhepta-2,4-diene-1, 7-dioate isomerase/5-carboxymethyl-2-oxo-hex-3-ene-1, 7-dioate decarboxylase (hpaG) {Rhodobacter capsulatus}
1149.1  2.1      82 % (Q: 94.2 %/S: 98.3 %)     2-oxoisovalerate dehydrogenase alpha subunit (bkdA1) {Pseudomonas putida}
1150.1  2.1      85 % (Q:100.0 %/S:100.0 %)     2-oxoisovalerate dehydrogenase beta subunit (bkdA2) {Pseudomonas putida}
2686.1  2.1      59 % (Q: 92.8 %/S: 94.4 %)     3-oxoadipate CoA-transferase subunit A (pcaI) {Pseudomonas putida}
2685.1  2.1      57 % (Q: 89.6 %/S: 95.4 %)     3-oxoadipate CoA-transferase subunit B (pcaJ) {Acinetobacter calcoaceticus}
2689.1  2.1      78 % (Q:100.0 %/S:100.0 %)     4-hydroxybenzoate hydroxylase (pobA) {Rhizobium leguminosarum}
413.1   2.1      61 % (Q: 99.3 %/S: 94.5 %)     acetolactate synthase (iolD) {Rhizobium leguminosarum}
4669.1  2.1      62 % (Q: 99.2 %/S: 98.5 %)     acetyl CoA synthase (acaB) {Pyrococcus furiosus}
2810.1  1.1      64 % (Q: 99.7 %/S:100.0 %)     alcohol dehydrogenase (adh) {Bacillus stearothermophilus}
929.1   1.1      76 % (Q: 98.0 %/S: 98.0 %)     aldehyde dehydrogenase (aldA) {Xanthobacter autotrophicus}
2691.1  2.1      99 % (Q:100.0 %/S:100.0 %)     beta-ketoadipate enol-lactone hydrolase (pcaD) {Agrobacterium tumefaciens}
2684.1  2.1      80 % (Q:100.0 %/S:100.0 %)     beta-ketoadipyl CoA thiolase (pcaF) {Burkholderia pseudomallei}
205.1   1.1      39 % (Q: 77.3 %/S: 73.9 %)     carboxymuconolactone decarboxylase (pcaC) {Methanobacterium thermoautotrophicum}
3434.1  1.1      33 % (Q: 97.8 %/S: 99.8 %)     cytochrome P450 (cyc) {Bacillus halodurans}
224.1   4.1     100 % (Q:100.0 %/S:100.0 %)     D-nopaline dehydrogenase (noxB) {Agrobacterium tumefaciens}
2982.1  4.1      99 % (Q:100.0 %/S:100.0 %)     D-nopaline dehydrogenase (noxA) {Agrobacterium tumefaciens}
3637.1  2.1      52 % (Q: 99.8 %/S:100.2 %)     dehydratase (xxxX) {Bacillus halodurans}
2456.1  3.1      36 % (Q: 80.8 %/S: 42.8 %)     dehydrogenase (xxxX) {Mycobacterium tuberculosis}
3782.1  2.1      35 % (Q: 97.4 %/S: 98.7 %)     dehydrogenase (xxxX) {Pseudomonas aeruginosa}
4046.1  2.1      78 % (Q: 94.1 %/S:100.0 %)     dehydrogenase/reductase (sdhX) {Streptomyces coelicolor}
4649.1  2.1      62 % (Q: 96.9 %/S: 92.0 %)     deoxyribose-phosphate aldolase (deoC) {Homo sapiens}
3023.1  1.1      33 % (Q: 49.1 %/S: 18.9 %)     esterase/lipase (xxxX) {Clostridium thermocellum}
4441.1  2.1      56 % (Q: 97.3 %/S: 96.1 %)     flavin dependant oxidoreductase (xxxX) {Escherichia coli}
2692.1  2.1     100 % (Q:100.0 %/S:100.0 %)     gamma carboxymuconolactone decarboxylase (pcaC) {Agrobacterium tumefaciens A348}
3695.1  2.1      71 % (Q: 99.2 %/S: 99.8 %)     glycerol kinase (glpK) {Thermus aquaticus}
2043.1  1.1      42 % (Q:101.2 %/S: 99.8 %)     glycerol kinase 2 (glpK) {Thermotoga maritima}
2555.1  2.1      73 % (Q: 96.9 %/S: 93.6 %)     glycerol-3-phosphate dehydrogenase (glpD) {Agrobacterium rhizogenes}
736.1   1.1      51 % (Q: 97.1 %/S: 95.9 %)     glycerophosphoryl diester phosphodiesterase (xxxX) {Thermotoga maritima}
3929.1  3.1      28 % (Q: 92.0 %/S:100.9 %)     glycerophosphoryl diester phosphodiesterase (glpQ) {Streptomyces coelicolor A3(2)}
1475.1  2.1      45 % (Q: 99.2 %/S: 91.2 %)     hippurate hydrolase {}
1957.1  1.1      72 % (Q: 96.7 %/S: 95.1 %)     intracellular PHB depolymerase (depA) {Ralstonia eutropha}
1151.1  2.1      57 % (Q:104.7 %/S:101.6 %)     lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex E2 (bkdB) {Pseudomonas putida}
4259.1  1.1      28 % (Q: 84.4 %/S: 81.9 %)     mannosidase (xxxX) {Cellulomonas fimi}
3611.1  1.1      73 % (Q: 90.6 %/S: 92.0 %)     methylglyoxal synthase (mgsA) {Brucella abortus}
2980.1  4.1     100 % (Q: 94.0 %/S:100.0 %)     NAD/NADP octopine/nopaline dehydrogenase (odh) {Agrobacterium tumefaciens}
3008.1  1.1      64 % (Q: 99.7 %/S:100.3 %)     NADP-dependent alcohol dehydrogenase (adh) {Mycobacterium bovis}
988.1   1.1      35 % (Q:100.6 %/S: 95.2 %)     naphthalene 1,2-dioxygenase (xxxX) {Pseudomonas stutzeri}
1478.1  2.1      68 % (Q: 97.3 %/S: 97.8 %)     nitrilotriacetate monooxygenase (xxxX) {Bacillus subtilis}
1439.1  4.1      43 % (Q: 98.0 %/S: 97.1 %)     nitrilotriacetate monooxygenase, component A (xxxX) {Paenibacillus sp}
4034.1  2.1      56 % (Q:101.4 %/S: 98.3 %)     oxidoreductase (xxxX) {Caulobacter crescentus}
3464.1  1.1      52 % (Q: 94.0 %/S: 96.5 %)     phosphoglycolate phosphatase (gph) {Pseudomonas aeruginosa}
4001.1  2.1      43 % (Q: 78.2 %/S: 76.9 %)     phosphopantetheinyl transferase (xxxX) {Pseudomonas aeruginosa}
6252.1  2.1      29 % (Q: 68.5 %/S: 89.4 %)     phosphoribosyltransferase (xxxX) {Deinococcus radiodurans Deinococcus radiodurans}
3456.1  1.1      61 % (Q: 97.1 %/S: 98.4 %)     poly-beta-hydroxybutyrate synthase (phbC) {Sinorhizobium meliloti}
2558.1  2.1      65 % (Q: 99.4 %/S:100.4 %)     propionyl-coenzyme A carboxylase, alpha polypeptide (pccA) {Homo sapiens}
2694.1  2.1     100 % (Q:100.0 %/S:100.0 %)     protocatechuate 3,4-dioxygenase alpha chain (pcaG) {Agrobacterium tumefaciens}
2693.1  2.1     100 % (Q:100.0 %/S:100.0 %)     protocatechuate 3,4-dioxygenase beta chain (pcaH) {Agrobacterium tumefaciens}
2374.1  1.1      66 % (Q: 52.1 %/S: 76.9 %)     reductase (xxxX) {Deinococcus radiodurans}
3437.1  1.1      42 % (Q:103.6 %/S: 99.3 %)     salicylate hydroxylase (nah) {Bordetella pertussis}
3798.1  2.1      43 % (Q: 84.9 %/S: 92.9 %)     short-chain dehydrogenase (xxxX) {Pseudomonas aeruginosa}
1335.1  1.1      73 % (Q: 99.4 %/S: 99.6 %)     TldD (tldD) {Bradyrhizobium japonicum}
3378.1  2.1      63 % (Q: 99.2 %/S: 99.6 %)     vanillin: NAD oxidoreductase (vdh) {Pseudomonas fluorescens}

8.1. TRANSPORT AND BINDING PROTEINS/AMINO ACIDS, PEPTIDES AND AMINES (217 genes)

284.1   3.1      35 % (Q: 92.4 %/S: 87.3 %)     ABC transporter, membrane spanning protein (xxxX) {Agrobacterium rhizogenes}
285.1   3.1      35 % (Q: 87.5 %/S: 86.6 %)     ABC transporter, membrane spanning protein (xxxX) {Pseudomonas aeruginosa}
329.1   1.1      87 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein (livH) {Pseudomonas aeruginosa PAO}
380.1   1.1      69 % (Q: 97.7 %/S: 99.3 %)     ABC transporter, membrane spanning protein {}
985.1   1.1      41 % (Q: 86.4 %/S: 81.5 %)     ABC transporter, membrane spanning protein (dppC) {Pyrococcus abyssi}
1085.1  1.1      46 % (Q: 99.6 %/S: 99.1 %)     ABC transporter, membrane spanning protein (xxxX) {Agrobacterium tumefaciens}
1086.1  1.1      58 % (Q: 89.6 %/S: 97.3 %)     ABC transporter, membrane spanning protein (xxxX) {Escherichia coli (strain K-12)}
1116.1  2.1      41 % (Q: 91.5 %/S: 73.2 %)     ABC transporter, membrane spanning protein (xxxX) {Escherichia coli}
1117.1  2.1      40 % (Q: 92.2 %/S: 29.9 %)     ABC transporter, membrane spanning protein (xxxX) {Pseudomonas putida}
1163.1  2.1      51 % (Q:100.0 %/S: 96.3 %)     ABC transporter, membrane spanning protein (xxxX) {Escherichia coli}
1164.1  2.1      62 % (Q: 87.5 %/S: 84.3 %)     ABC transporter, membrane spanning protein (xxxX) {Escherichia coli}
1343.1  1.1      49 % (Q: 90.1 %/S: 90.5 %)     ABC transporter, membrane spanning protein (xxxX) {Thermotoga maritima}
1344.1  1.1      56 % (Q: 96.3 %/S: 98.1 %)     ABC transporter, membrane spanning protein (xxxX) {Synechocystis sp}
1366.1  1.1      52 % (Q: 99.7 %/S: 98.3 %)     ABC transporter, membrane spanning protein (xxxX) {Deinococcus radiodurans}
1848.1  2.1      80 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein (xxxX) {Mesorhizobium loti}
1849.1  2.1      84 % (Q: 97.2 %/S: 95.8 %)     ABC transporter, membrane spanning protein (xxxX) {Mesorhizobium loti}
2288.1  1.1      66 % (Q: 95.4 %/S: 89.4 %)     ABC transporter, membrane spanning protein (potB) {Escherichia coli}
2289.1  1.1      73 % (Q: 98.1 %/S: 97.4 %)     ABC transporter, membrane spanning protein (xxxX) {Streptomyces coelicolor}
2299.1  3.1      40 % (Q: 97.1 %/S: 77.3 %)     ABC transporter, membrane spanning protein (xxxX) {Streptomyces coelicolor}
2339.1  3.1      45 % (Q:101.3 %/S: 95.0 %)     ABC transporter, membrane spanning protein (xxxX) {Deinococcus radiodurans}
2340.1  3.1      37 % (Q: 88.4 %/S: 91.3 %)     ABC transporter, membrane spanning protein (xxxX) {Bacillus halodurans}
2385.1  1.1      46 % (Q: 97.7 %/S: 96.7 %)     ABC transporter, membrane spanning protein (xxxX) {Rhizobium leguminosarum bv. viciae}
3995.1  2.1      35 % (Q: 98.1 %/S: 95.8 %)     ABC transporter, membrane spanning protein (xxxX) {Bacillus licheniformis}
39.1    4.1      99 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [agrocinopine] (accD) {Agrobacterium tumefaciens SAKURA}
2912.1  4.1      99 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [agrocinopine] (accE) {Agrobacterium tumefaciens}
31.1    2.1      48 % (Q: 85.9 %/S: 90.5 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Thermotoga maritima}
280.1   3.1      45 % (Q: 91.2 %/S: 85.2 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Streptomyces coelicolor}
680.1   3.1      43 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Deinococcus radiodurans}
681.1   3.1      43 % (Q:100.9 %/S:100.0 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Deinococcus radiodurans}
953.1   2.1      53 % (Q: 95.9 %/S: 96.3 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Deinococcus radiodurans}
1351.1  1.1      52 % (Q: 94.5 %/S: 94.0 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Escherichia coli K12}
1352.1  1.1      46 % (Q: 88.0 %/S: 92.8 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Thermotoga maritima}
2062.1  1.1      57 % (Q: 96.4 %/S: 97.4 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Agrobacterium tumefaciens}
2063.1  1.1      59 % (Q: 86.9 %/S: 97.1 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Agrobacterium tumefaciens}
2104.1  2.1      35 % (Q: 98.6 %/S: 93.2 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Agrobacterium tumefaciens}
2105.1  2.1      31 % (Q: 84.2 %/S: 96.9 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Bacillus subtilis}
2696.1  2.1      47 % (Q: 98.6 %/S: 98.6 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Deinococcus radiodurans}
2697.1  2.1      55 % (Q: 98.6 %/S: 97.7 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Bacillus halodurans}
2803.1  1.1      41 % (Q: 96.6 %/S: 99.8 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Pseudomonas aeruginosa}
3348.1  2.1      56 % (Q: 98.2 %/S: 99.5 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Pseudomonas aeruginosa}
3349.1  2.1      62 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Pseudomonas aeruginosa}
3440.1  1.1      68 % (Q: 96.0 %/S: 96.0 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Rhizobium leguminosarum}
3441.1  1.1      71 % (Q:100.0 %/S:100.3 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Rhizobium leguminosarum}
3737.1  2.1      53 % (Q: 88.1 %/S: 94.9 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Pseudomonas aeruginosa}
3738.1  2.1      41 % (Q: 96.2 %/S: 97.4 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Pseudomonas aeruginosa}
3784.1  2.1      41 % (Q: 95.1 %/S: 86.7 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Thermotoga maritima}
4727.1  2.1      50 % (Q: 98.2 %/S: 91.2 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Rhizobium sp}
4728.1  2.1      58 % (Q:100.4 %/S:100.0 %)     ABC transporter, membrane spanning protein [amino acid] (xxxX) {Rhizobium sp}
4003.1  2.1      53 % (Q: 97.9 %/S: 97.9 %)     ABC transporter, membrane spanning protein [bacteriocin] (rspE) {Rhizobium leguminosarum bv. trifolii}
328.1   1.1      78 % (Q:100.4 %/S:101.1 %)     ABC transporter, membrane spanning protein [branched chain amino acid] (xxxX) {Rhizobium leguminosarum bv. viciae}
2330.1  3.1      81 % (Q: 94.0 %/S: 98.8 %)     ABC transporter, membrane spanning protein [branched chain amino acid] (xxxX) {Aeropyrum pernix}
2331.1  3.1      89 % (Q:100.0 %/S: 99.7 %)     ABC transporter, membrane spanning protein [branched chain amino acid] (xxxX) {Aeropyrum pernix}
2712.1  2.1      39 % (Q: 97.9 %/S: 93.7 %)     ABC transporter, membrane spanning protein [branched chain amino acid] (livH) {Deinococcus radiodurans}
2713.1  2.1      33 % (Q: 87.8 %/S: 49.4 %)     ABC transporter, membrane spanning protein [branched chain amino acid] (livM) {Rhodopseudomonas palustris}
4191.1  2.1      38 % (Q: 96.3 %/S: 99.3 %)     ABC transporter, membrane spanning protein [branched chain amino acid] (xxxX) {Rhodopseudomonas palustris}
4192.1  2.1      37 % (Q: 91.3 %/S: 51.4 %)     ABC transporter, membrane spanning protein [branched chain amino acid] (xxxX) {Rhodopseudomonas palustris}
210.1   2.1      44 % (Q: 99.4 %/S: 99.7 %)     ABC transporter, membrane spanning protein [dipeptide] (dppB) {Bacillus halodurans}
211.1   2.1      51 % (Q: 99.3 %/S: 87.5 %)     ABC transporter, membrane spanning protein [dipeptide] (dppC) {Bacillus firmus}
2506.1  2.1      45 % (Q: 99.7 %/S: 96.2 %)     ABC transporter, membrane spanning protein [dipeptide] (xxxX) {Rhizobium sp. NGR234}
2507.1  2.1      48 % (Q: 91.4 %/S: 92.7 %)     ABC transporter, membrane spanning protein [dipeptide] (xxxX) {Pyrococcus abyssi}
3177.1  1.1      62 % (Q: 97.7 %/S: 95.8 %)     ABC transporter, membrane spanning protein [dipeptide] (dppC) {Pyrococcus abyssi}
3178.1  1.1      53 % (Q: 99.7 %/S: 95.8 %)     ABC transporter, membrane spanning protein [dipeptide] (dppB) {Helicobacter pylori (strain J99)}
3397.1  2.1      53 % (Q: 95.9 %/S: 92.9 %)     ABC transporter, membrane spanning protein [dipeptide] (dppB) {Escherichia coli}
3398.1  2.1      56 % (Q: 94.6 %/S: 92.5 %)     ABC transporter, membrane spanning protein [dipeptide] (dppC) {Pyrococcus abyssi}
4180.1  2.1      73 % (Q: 99.7 %/S:100.0 %)     ABC transporter, membrane spanning protein [dipeptide] (dppB) {Escherichia coli K12}
4181.1  2.1      74 % (Q: 93.1 %/S: 95.6 %)     ABC transporter, membrane spanning protein [dipeptide] (dppC) {Pseudomonas aeruginosa}
4510.1  2.1      48 % (Q: 97.1 %/S: 98.5 %)     ABC transporter, membrane spanning protein [dipeptide] (xxxX) {Mesorhizobium loti}
4511.1  2.1      60 % (Q: 99.7 %/S: 98.6 %)     ABC transporter, membrane spanning protein [dipeptide] (moaE) {Mesorhizobium loti}
666.1   3.1      48 % (Q: 88.6 %/S: 92.2 %)     ABC transporter, membrane spanning protein [glycine betaine/L-proline] (proW) {Escherichia coli}
4121.1  2.1      54 % (Q: 84.1 %/S: 87.6 %)     ABC transporter, membrane spanning protein [glycine betaine] (xxxX) {Pseudomonas aeruginosa}
219.1   4.1     100 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [nopaline] (nocQ) {Agrobacterium tumefaciens SAKURA}
220.1   4.1     100 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [nopaline] (nocM) {Agrobacterium tumefaciens SAKURA}
3363.1  2.1      85 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [oligopeptide ] (xxxX) {Thermotoga maritima}
960.1   2.1      44 % (Q: 98.1 %/S: 92.4 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Bacillus firmus}
961.1   2.1      50 % (Q: 95.6 %/S: 96.5 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Vibrio cholerae}
1484.1  2.1      71 % (Q: 92.1 %/S: 94.6 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Pyrococcus horikoshii}
1485.1  2.1      77 % (Q: 92.5 %/S: 97.9 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Pseudomonas aeruginosa}
1818.1  2.1      48 % (Q: 97.4 %/S: 94.6 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Mesorhizobium loti}
2447.1  3.1      55 % (Q: 97.1 %/S: 97.4 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Agrobacterium tumefaciens}
2448.1  3.1      52 % (Q: 97.8 %/S: 99.1 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Agrobacterium tumefaciens}
2707.1  2.1      40 % (Q: 98.4 %/S: 91.5 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Bacillus halodurans}
2708.1  2.1      49 % (Q: 95.4 %/S: 88.2 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Bacillus halodurans}
2852.1  3.1      40 % (Q: 99.7 %/S: 91.5 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Vibrio cholerae}
2853.1  3.1      45 % (Q: 97.0 %/S: 92.9 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Vibrio cholerae}
3079.1  2.1      66 % (Q:100.0 %/S:100.3 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Pyrococcus horikoshii}
3080.1  2.1      72 % (Q: 97.1 %/S: 97.1 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Pyrococcus horikoshii}
3362.1  2.1      77 % (Q: 98.4 %/S: 98.2 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Thermotoga maritima}
3762.1  2.1      86 % (Q:100.7 %/S:100.0 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Escherichia coli K12}
3763.1  2.1      53 % (Q: 99.7 %/S: 90.3 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Vibrio cholerae}
3821.1  2.1      55 % (Q: 94.9 %/S: 96.7 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Thermotoga maritima}
3822.1  2.1      52 % (Q: 90.9 %/S:100.0 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Thermotoga maritima}
3920.1  3.1      63 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Bacillus halodurans}
3921.1  3.1      58 % (Q: 92.7 %/S: 95.7 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Bacillus halodurans}
3979.1  2.1      50 % (Q: 96.7 %/S: 91.3 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Bacillus halodurans}
3980.1  2.1      55 % (Q: 99.1 %/S: 99.4 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Bacillus halodurans}
3986.1  2.1      80 % (Q: 98.7 %/S:100.0 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Bacillus halodurans}
3987.1  2.1      76 % (Q: 99.7 %/S:100.3 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Helicobacter pylori 26695}
4270.1  1.1      82 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Thermotoga maritima}
4271.1  1.1      78 % (Q: 90.5 %/S: 97.5 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Sinorhizobium meliloti}
4520.1  2.1      47 % (Q: 91.6 %/S: 89.4 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Bacillus subtilis}
4521.1  2.1      40 % (Q:100.0 %/S: 99.7 %)     ABC transporter, membrane spanning protein [oligopeptide] (xxxX) {Bacillus subtilis}
1446.1  4.1      63 % (Q: 98.5 %/S:100.0 %)     ABC transporter, membrane spanning protein [peptide] {}
1449.1  4.1      61 % (Q: 98.1 %/S: 92.5 %)     ABC transporter, membrane spanning protein [peptide] (dfpC) {Pyrococcus horikoshii}
1819.1  2.1      41 % (Q: 98.1 %/S: 98.4 %)     ABC transporter, membrane spanning protein [peptide] (dppB) {Rhizobium sp. NGR234}
3607.1  1.1      77 % (Q: 95.8 %/S: 99.5 %)     ABC transporter, membrane spanning protein [peptide] (xxxX) {Pseudomonas aeruginosa}
3608.1  1.1      78 % (Q:101.4 %/S:101.4 %)     ABC transporter, membrane spanning protein [peptide] (xxxX) {Pseudomonas aeruginosa}
3774.1  2.1      78 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [polyamine] (xxxX) {Pseudomonas aeruginosa}
3775.1  2.1      81 % (Q: 99.7 %/S:100.3 %)     ABC transporter, membrane spanning protein [polyamine] (xxxX) {Pseudomonas aeruginosa}
342.1   2.1      75 % (Q: 99.6 %/S: 99.6 %)     ABC transporter, membrane spanning protein [proline/glycine betaine] (proW) {Sinorhizobium meliloti}
3209.1  1.1      55 % (Q: 78.7 %/S: 96.8 %)     ABC transporter, membrane spanning protein [proline/glycine betaine] (xxxX) {Pseudomonas aeruginosa}
3598.1  1.1      68 % (Q: 95.6 %/S: 95.9 %)     ABC transporter, membrane spanning protein [proline/glycine/betaine] (xxxX) {Escherichia coli K12}
3600.1  1.1      73 % (Q: 94.7 %/S: 93.6 %)     ABC transporter, membrane spanning protein [proline/glycine/betaine] (xxxX) {Escherichia coli K12}
653.1   3.1      38 % (Q: 93.9 %/S: 94.3 %)     ABC transporter, membrane spanning protein [putrescine] (potI) {Pseudomonas aeruginosa}
654.1   3.1      36 % (Q: 86.6 %/S: 91.2 %)     ABC transporter, membrane spanning protein [putrescine] (potH) {Pseudomonas aeruginosa}
2844.1  3.1      32 % (Q: 95.9 %/S: 92.1 %)     ABC transporter, membrane spanning protein [spermidine/putrescine] (potC) {Pseudomonas aeruginosa}
2845.1  3.1      31 % (Q: 91.9 %/S: 93.5 %)     ABC transporter, membrane spanning protein [spermidine/putrescine] (potB) {Pseudomonas aeruginosa}
3996.1  2.1      37 % (Q: 78.8 %/S: 90.8 %)     ABC transporter, membrane spanning protein [spermidine/putrescine] (xxxX) {Agrobacterium rhizogenes}
4554.1  2.1      84 % (Q: 99.6 %/S: 99.6 %)     ABC transporter, membrane spanning protein [spermidine/putrescine] (xxxX) {Mesorhizobium loti}
4555.1  2.1      85 % (Q: 90.8 %/S: 90.8 %)     ABC transporter, membrane spanning protein [spermidine/putrescine] (xxxX) {Mesorhizobium loti}
32.1    1.1      80 % (Q: 99.0 %/S: 97.8 %)     ABC transporter, membrane spanning protein [urea/amide] {}
55.1    1.1      73 % (Q: 99.0 %/S: 94.4 %)     ABC transporter, membrane spanning protein [urea/amide] (xxxX) {Pseudomonas aeruginosa}
282.1   3.1      42 % (Q: 96.5 %/S: 99.2 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Pseudomonas aeruginosa}
325.1   1.1      87 % (Q:100.0 %/S: 98.0 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Rhizobium leguminosarum bv. viciae}
326.1   1.1      83 % (Q: 97.6 %/S: 99.3 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Rhizobium leguminosarum bv. viciae}
983.1   1.1      46 % (Q: 92.3 %/S: 89.9 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Deinococcus radiodurans}
984.1   1.1      44 % (Q: 89.0 %/S: 96.6 %)     ABC transporter, nucleotide binding/ATPase protein (dppD) {Thermotoga maritima}
1088.1  1.1      69 % (Q: 96.9 %/S: 97.7 %)     ABC transporter, nucleotide binding/ATPase protein (nocP1) {Vibrio alginolyticus}
1118.1  2.1      55 % (Q: 77.6 %/S: 70.4 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Lactococcus lactis}
1165.1  2.1      62 % (Q: 99.3 %/S: 99.3 %)     ABC transporter, nucleotide binding/ATPase protein {}
1345.1  1.1      57 % (Q: 97.5 %/S: 97.9 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Pseudomonas aeruginosa}
1350.1  1.1      65 % (Q: 97.9 %/S: 97.9 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Archaeoglobus fulgidus}
1364.1  1.1      64 % (Q: 97.1 %/S: 97.9 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Deinococcus radiodurans}
1365.1  1.1      54 % (Q: 97.1 %/S: 98.5 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Deinococcus radiodurans}
1466.1  2.1      50 % (Q: 95.0 %/S: 98.0 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Streptococcus pneumoniae}
1850.1  2.1      76 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Mesorhizobium loti}
1855.1  2.1      40 % (Q: 91.6 %/S:108.0 %)     ABC transporter, nucleotide binding/ATPase protein (xxx) {Streptomyces coelicolor}
2287.1  1.1      62 % (Q: 99.7 %/S:101.1 %)     ABC transporter, nucleotide binding/ATPase protein (potG) {Escherichia coli}
2298.1  3.1      51 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Pseudomonas marginalis pv . alfalfae}
2341.1  3.1      50 % (Q: 96.4 %/S: 84.2 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Pseudomonas aeruginosa}
2342.1  3.1      49 % (Q:101.3 %/S: 94.0 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Synechocystis sp}
3736.1  2.1      66 % (Q: 94.9 %/S: 97.6 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Pseudomonas aeruginosa}
38.1    4.1      99 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [agrocinopine] (accC) {Agrobacterium tumefaciens SAKURA}
13001.1 4.1      99 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [agrocinopine] (accb) {Agrobacterium tumefaciens}
682.1   3.1      58 % (Q: 97.9 %/S: 98.3 %)     ABC transporter, nucleotide binding/ATPase protein [amino acid] (xxxX) {Archaeoglobus fulgidus}
954.1   2.1      68 % (Q: 99.5 %/S: 90.9 %)     ABC transporter, nucleotide binding/ATPase protein [amino acid] (xxxX) {Archaeoglobus fulgidus}
2106.1  2.1      57 % (Q: 86.9 %/S: 98.8 %)     ABC transporter, nucleotide binding/ATPase protein [amino acid] (xxxX) {Archaeoglobus fulgidus}
2700.1  2.1      70 % (Q: 97.2 %/S: 95.0 %)     ABC transporter, nucleotide binding/ATPase protein [amino acid] (xxxX) {Escherichia coli K12}
3347.1  2.1      73 % (Q: 99.6 %/S: 99.6 %)     ABC transporter, nucleotide binding/ATPase protein [amino acid] (xxxX) {Pseudomonas aeruginosa}
3442.1  1.1      91 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [amino acid] (xxxX) {Rhizobium leguminosarum}
3783.1  2.1      73 % (Q: 96.8 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [amino acid] (xxxX) {Escherichia coli}
4729.1  2.1      64 % (Q: 96.9 %/S: 97.7 %)     ABC transporter, nucleotide binding/ATPase protein [amino acid] (xxxX) {Rhizobium sp}
4004.1  2.1      55 % (Q: 93.5 %/S: 95.4 %)     ABC transporter, nucleotide binding/ATPase protein [bacteriocin] (rspD) {Sinorhizobium meliloti}
2328.1  3.1      73 % (Q:102.3 %/S: 98.9 %)     ABC transporter, nucleotide binding/ATPase protein [branched chain amino acid] (xxxX) {Streptomyces coelicolor A3(2)}
2332.1  3.1      76 % (Q: 84.9 %/S: 95.2 %)     ABC transporter, nucleotide binding/ATPase protein [branched chain amino acid] (xxxX) {Streptomyces coelicolor A3(2)}
2714.1  2.1      35 % (Q: 97.6 %/S:102.9 %)     ABC transporter, nucleotide binding/ATPase protein [branched chain amino acid] (livG) {Pseudomonas aeruginosa}
2715.1  2.1      42 % (Q: 97.9 %/S: 97.1 %)     ABC transporter, nucleotide binding/ATPase protein [branched chain amino acid] (livF) {Pseudomonas aeruginosa}
4189.1  2.1      42 % (Q: 95.5 %/S: 98.8 %)     ABC transporter, nucleotide binding/ATPase protein [branched chain amino acid] (xxxX) {Deinococcus radiodurans}
4190.1  2.1      45 % (Q: 95.3 %/S: 93.7 %)     ABC transporter, nucleotide binding/ATPase protein [branched chain amino acid] (xxxX) {Streptomyces coelicolor A3(2)}
3175.1  1.1      56 % (Q: 93.6 %/S: 93.2 %)     ABC transporter, nucleotide binding/ATPase protein [dipeptide] (dppF) {Bacillus subtilis}
3176.1  1.1      60 % (Q: 99.3 %/S: 98.6 %)     ABC transporter, nucleotide binding/ATPase protein [dipeptide] (dppD) {Ochrobactrum anthropi}
3399.1  2.1      56 % (Q: 96.9 %/S: 89.9 %)     ABC transporter, nucleotide binding/ATPase protein [dipeptide] (dppD) {Rhizobium sp}
3400.1  2.1      55 % (Q: 98.8 %/S: 96.4 %)     ABC transporter, nucleotide binding/ATPase protein [dipeptide] (dppF) {Streptomyces coelicolor}
4182.1  2.1      73 % (Q: 97.1 %/S: 95.8 %)     ABC transporter, nucleotide binding/ATPase protein [dipeptide] (dppD) {Pseudomonas aeruginosa}
4183.1  2.1      75 % (Q: 97.9 %/S: 99.6 %)     ABC transporter, nucleotide binding/ATPase protein [dipeptide] (dppF) {Pseudomonas aeruginosa}
4512.1  2.1      38 % (Q:105.8 %/S: 94.2 %)     ABC transporter, nucleotide binding/ATPase protein [dipeptide] (moaD) {Agrobacterium tumefaciens A6}
441.1   3.1     100 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [glutamine] (glnP/glnQ) {Agrobacterium tumefaciens}
665.1   3.1      42 % (Q: 98.8 %/S: 99.0 %)     ABC transporter, nucleotide binding/ATPase protein [glycine betaine/L-proline] (proV) {Salmonella typhimurium}
667.1   3.1      34 % (Q: 98.0 %/S:102.4 %)     ABC transporter, nucleotide binding/ATPase protein [glycine betaine/L-proline] (proX) {Escherichia coli}
4120.1  2.1      58 % (Q: 68.8 %/S: 94.9 %)     ABC transporter, nucleotide binding/ATPase protein [glycine betaine] (xxxX) {Pseudomonas aeruginosa}
217.1   4.1     100 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [nopaline] (nocP) {Agrobacterium tumefaciens pTiC58}
964.1   2.1      53 % (Q: 96.9 %/S: 96.3 %)     ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX) {Bacillus halodurans}
965.1   2.1      50 % (Q: 96.2 %/S:101.6 %)     ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX) {Bacillus halodurans}
1482.1  2.1      67 % (Q: 99.7 %/S: 98.7 %)     ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX) {Bacillus halodurans}
1483.1  2.1      66 % (Q: 95.5 %/S: 95.5 %)     ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX) {Bacillus thuringiensis}
2446.1  3.1      53 % (Q: 99.6 %/S: 96.7 %)     ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX) {Mycobacterium tuberculosis}
2854.1  3.1      48 % (Q: 98.5 %/S: 94.7 %)     ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX) {E. coli}
2855.1  3.1      49 % (Q: 98.8 %/S: 97.9 %)     ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX) {Bacillus halodurans}
3081.1  2.1      53 % (Q:106.0 %/S: 98.3 %)     ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX) {Bacillus thuringiensis}
3082.1  2.1      57 % (Q: 98.5 %/S: 98.5 %)     ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX) {Rhizobium sp}
3361.1  2.1      78 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX) {Vibrio cholerae (group O1 strain N16961)}
3764.1  2.1      68 % (Q: 99.0 %/S: 93.9 %)     ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX) {Vibrio cholerae}
3820.1  2.1      47 % (Q:102.8 %/S: 95.4 %)     ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX) {Escherichia coli}
3922.1  3.1      54 % (Q: 98.5 %/S: 96.5 %)     ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX) {Vibrio cholerae}
3984.1  2.1      66 % (Q:100.0 %/S:100.4 %)     ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX) {Streptomyces coelicolor A3(2)}
3985.1  2.1      77 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX) {Ochrobactrum anthropi}
4268.1  1.1      70 % (Q:100.2 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX) {Escherichia coli}
1450.1  4.1      48 % (Q:100.2 %/S:103.7 %)     ABC transporter, nucleotide binding/ATPase protein [peptide] (dfpD) {Pseudomonas aeruginosa (strain PAO1)}
1817.1  2.1      43 % (Q: 97.6 %/S: 98.5 %)     ABC transporter, nucleotide binding/ATPase protein [peptide] (xxxX) {Bacillus halodurans}
3606.1  1.1      74 % (Q: 98.2 %/S: 99.3 %)     ABC transporter, nucleotide binding/ATPase protein [peptide] (xxxX) {Pseudomonas aeruginosa}
4526.1  2.1      48 % (Q: 97.3 %/S: 96.9 %)     ABC transporter, nucleotide binding/ATPase protein [peptide] (xxxX) {Mesorhizobium loti}
3773.1  2.1      79 % (Q: 99.7 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [polyamine] (xxxX) {Pseudomonas aeruginosa}
341.1   2.1      79 % (Q: 96.4 %/S: 97.1 %)     ABC transporter, nucleotide binding/ATPase protein [proline/glycine betaine] (proV) {Sinorhizobium meliloti}
3208.1  1.1      64 % (Q: 84.2 %/S: 74.6 %)     ABC transporter, nucleotide binding/ATPase protein [proline/glycine betaine] (xxxX) {Pseudomonas aeruginosa}
3599.1  1.1      66 % (Q: 98.7 %/S: 98.7 %)     ABC transporter, nucleotide binding/ATPase protein [proline/glycine/betaine] (xxxX) {Escherichia coli K12}
652.1   3.1      50 % (Q: 86.8 %/S: 87.3 %)     ABC transporter, nucleotide binding/ATPase protein [putrescine] (potG) {Deinococcus radiodurans}
2846.1  3.1      43 % (Q: 92.2 %/S: 98.1 %)     ABC transporter, nucleotide binding/ATPase protein [spermidine/putrescine] (potA) {Archaeoglobus fulgidus}
3994.1  2.1      50 % (Q: 84.2 %/S: 81.1 %)     ABC transporter, nucleotide binding/ATPase protein [spermidine/putrescine] (xxxX) {Actinobacillus actinomycetemcomitans}
4557.1  2.1      81 % (Q: 99.7 %/S: 99.4 %)     ABC transporter, nucleotide binding/ATPase protein [spermidine/putrescine] (xxxX) {Mesorhizobium loti}
57.1    1.1      69 % (Q: 97.6 %/S: 99.6 %)     ABC transporter, nucleotide binding/ATPase protein [urea/amide] (xxxX) {Pseudomonas aeruginosa}
351.1   1.1      71 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [urea/amide] (xxxX) {Pseudomonas aeruginosa}
442.1   3.1     100 % (Q:100.0 %/S:100.0 %)     ABC transporter, substrate binding protein [glutamine] (glnH) {Agrobacterium tumefaciens}
1815.1  2.1      27 % (Q: 97.3 %/S:102.8 %)     ABC transporter, substrate binding protein [peptide] (xxxX) {Mesorhizobium loti}
393.1   1.1      44 % (Q: 95.3 %/S: 91.4 %)     branched-chain amino acid permease (xxxX) {Deinococcus radiodurans}
1759.1  1.1      60 % (Q: 94.8 %/S: 97.1 %)     homoserine/homoserine lactone efflux protein (rhtB) {Escherichia coli}
273.1   2.1      81 % (Q: 98.6 %/S: 97.6 %)     L-asparagine permease (ansP) {Rhizobium etli}
164.1   1.1      46 % (Q: 96.0 %/S: 95.1 %)     LysE family transporter (lysE) {Streptomyces coelicolor A3(2)}
4082.1  2.1      68 % (Q: 96.5 %/S: 99.6 %)     MFS permease [proline/betaine] (proB) {Escherichia coli}
1885.1  1.1      71 % (Q: 93.0 %/S: 92.2 %)     proton/glutamate transport protein (xxxX) {Streptomyces coelicolor A3}
137.1   1.1      68 % (Q:100.0 %/S:100.0 %)     RhtB family transporter (rhtB) {Deinococcus radiodurans}
1162.1  2.1      37 % (Q: 84.3 %/S: 86.3 %)     RhtB family transporter (rhtB) {Vibrio cholerae}
1383.1  1.1      66 % (Q: 98.5 %/S: 96.2 %)     RhtB family transporter (rhtB) {Bacillus halodurans}
1394.1  1.1      62 % (Q: 96.3 %/S: 97.6 %)     RhtB family transporter (rhtB) {Pseudomonas aeruginosa}
1572.1  3.1      45 % (Q: 94.0 %/S: 84.2 %)     RhtB family transporter (rhtB) {Leishmania major}
2217.1  1.1      58 % (Q: 99.5 %/S: 99.5 %)     RhtB family transporter (rhtB) {Agrobacterium tumefaciens SAKURA}
3752.1  2.1      54 % (Q: 90.2 %/S: 95.8 %)     RhtB family transporter (rhtB) {Vibrio cholerae}
4310.1  1.1      75 % (Q: 99.5 %/S: 95.8 %)     RhtB family transporter (rhtB) {Pseudomonas aeruginosa}
4340.1  1.1      53 % (Q: 91.5 %/S:100.9 %)     RhtB family transporter (rhtB) {Deinococcus radiodurans}

8.2. TRANSPORT AND BINDING PROTEINS/ANIONS (33 genes)

518.1   2.1      58 % (Q: 91.5 %/S: 94.1 %)     ABC transporter, membrane spanning protein (xxxX) {Vibrio cholerae}
519.1   2.1      61 % (Q: 96.4 %/S: 94.3 %)     ABC transporter, membrane spanning protein (xxxX) {Vibrio cholerae}
1895.1  1.1      76 % (Q: 95.8 %/S: 96.8 %)     ABC transporter, membrane spanning protein (cysT) {Bacillus halodurans}
1896.1  1.1      80 % (Q: 93.1 %/S: 91.8 %)     ABC transporter, membrane spanning protein (xxxX) {Pseudomonas aeruginosa}
2732.1  1.1      52 % (Q:100.5 %/S:102.6 %)     ABC transporter, membrane spanning protein (pstA) {Campylobacter jejuni}
2733.1  1.1      47 % (Q: 99.8 %/S:105.5 %)     ABC transporter, membrane spanning protein (pstC) {Archaeoglobus fulgidus}
4014.1  2.1      27 % (Q: 88.1 %/S: 97.5 %)     ABC transporter, membrane spanning protein [anion] (xxxX) {Thermotoga maritima}
594.1   4.1      42 % (Q: 77.3 %/S: 88.3 %)     ABC transporter, membrane spanning protein [nitrate/sulfonates] (ssuC) {Bacillus subtilis}
1437.1  4.1      64 % (Q: 94.0 %/S: 95.4 %)     ABC transporter, membrane spanning protein [nitrate/sulfonate] (nrtB) {Pseudomonas aeruginosa}
3709.1  2.1      73 % (Q: 95.3 %/S: 95.0 %)     ABC transporter, membrane spanning protein [nitrate] (nrtB) {Synechocystis sp. PCC 68}
298.1   1.1      47 % (Q:112.2 %/S: 99.8 %)     ABC transporter, membrane spanning protein [phosphonate] (phnE) {Sinorhizobium meliloti}
299.1   1.1      61 % (Q: 96.6 %/S: 99.1 %)     ABC transporter, membrane spanning protein [phosphonate] {}
517.1   2.1      61 % (Q: 82.1 %/S: 80.5 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Xylella fastidiosa}
618.1   1.1      41 % (Q: 93.9 %/S: 97.1 %)     ABC transporter, nucleotide binding/ATPase protein (nrt) {Synechocystis sp}
1897.1  1.1      71 % (Q: 98.6 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Xylella fastidiosa}
2731.1  1.1      71 % (Q: 91.9 %/S: 90.9 %)     ABC transporter, nucleotide binding/ATPase protein (pstB) {Caulobacter crescentus}
4013.1  2.1      40 % (Q: 98.4 %/S: 95.4 %)     ABC transporter, nucleotide binding/ATPase protein [anion] (xxxX) {Pseudomonas aeruginosa}
595.1   4.1      51 % (Q: 95.1 %/S: 91.0 %)     ABC transporter, nucleotide binding/ATPase protein [nitrate/sulfonates] (ssuB) {Pseudomonas putida}
1436.1  4.1      59 % (Q: 92.7 %/S: 88.9 %)     ABC transporter, nucleotide binding/ATPase protein [nitrate/sulfonate] (nrtC) {Pseudomonas putida}
1102.1  1.1      81 % (Q: 99.6 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [nitrate] (xxxX) {Streptomyces coelicolor}
3708.1  2.1      84 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [nitrate] (nrtC) {Klebsiella oxytoca}
3711.1  2.1      41 % (Q: 92.3 %/S: 96.6 %)     ABC transporter, nucleotide binding/ATPase protein [nitrate] (nrtC) {Synechocystis sp. strain PCC6803}
3622.1  1.1      81 % (Q: 91.3 %/S: 96.7 %)     ABC transporter, nucleotide binding/ATPase protein [phosphonate] (phnC) {Sinorhizobium meliloti}
1438.1  4.1      38 % (Q:100.0 %/S: 97.5 %)     ABC transporter, substrate binding protein [nitrate/sulfonate] (xxxX) {Pseudomonas aeruginosa}
3710.1  2.1      78 % (Q: 98.8 %/S:100.0 %)     ABC transporter, substrate binding protein [nitrate] (nrtA) {oscillatoriacean cyanobacterium}
503.1   1.1      69 % (Q: 98.8 %/S: 94.0 %)     chloride channel protein (xxxX) {Neisseria meningitidis MC58}
1914.1  1.1      49 % (Q: 97.4 %/S: 99.2 %)     chloride channel protein (clc) {Halobacterium sp. NRC-1}
4551.1  2.1      28 % (Q: 95.6 %/S: 93.0 %)     chromate transport protein (chrA) {Bacillus cereus}
1039.1  1.1      66 % (Q: 94.5 %/S: 98.7 %)     Na+/Pi-cotransporter (xxxX) {Rhizobium radiobacter}
1644.1  1.1      39 % (Q:107.1 %/S: 99.1 %)     phosphate permease (pit) {Helicobacter pylori 26695}
3388.1  2.1      86 % (Q: 97.4 %/S: 56.9 %)     phosphate permease (N-terminal) (pit*) {Sinorhizobium meliloti}
1254.1  1.1      34 % (Q: 95.5 %/S: 91.6 %)     sulfate permease (hvsT) {Mycobacterium tuberculosis}
2356.1  1.1      68 % (Q: 98.0 %/S: 97.6 %)     sulfate permease (xxxX) {Pseudomonas sp. R9}

8.3. TRANSPORT AND BINDING PROTEINS/CARBOHYDRATES, ORGANIC ALCOHOLS, AND ACIDS (179 genes)

507.1   2.1      64 % (Q: 97.6 %/S:100.0 %)     ABC transporter, membrane spanning protein (xxxX) {Bacillus subtilis}
508.1   2.1      73 % (Q: 97.0 %/S: 98.5 %)     ABC transporter, membrane spanning protein (xxxX) {Streptomyces coelicolor A3-2}
1356.1  1.1      38 % (Q: 92.8 %/S: 93.1 %)     ABC transporter, membrane spanning protein (xxxX) {Bacillus halodurans}
1357.1  1.1      32 % (Q: 89.8 %/S: 91.0 %)     ABC transporter, membrane spanning protein (xxxX) {Thermococcus litoralis}
1927.1  3.1      76 % (Q: 99.6 %/S:100.0 %)     ABC transporter, membrane spanning protein (xxxX) {Streptomyces coelicolor A3(2)}
1928.1  3.1      69 % (Q: 88.4 %/S: 99.0 %)     ABC transporter, membrane spanning protein (xxxX) {Thermococcus litoralis}
2096.1  2.1      83 % (Q: 92.5 %/S: 94.5 %)     ABC transporter, membrane spanning protein (xxxX) {Mesorhizobium loti}
2271.1  1.1      77 % (Q: 99.7 %/S: 90.5 %)     ABC transporter, membrane spanning protein (aglF) {Sinorhizobium meliloti}
2272.1  1.1      70 % (Q: 96.6 %/S: 97.1 %)     ABC transporter, membrane spanning protein (aglG) {Sinorhizobium meliloti}
2521.1  2.1      36 % (Q: 89.6 %/S: 96.3 %)     ABC transporter, membrane spanning protein (xxxX) {Bacillus subtilis}
2522.1  2.1      37 % (Q: 92.3 %/S: 93.2 %)     ABC transporter, membrane spanning protein (xxxX) {Bacillus subtilis}
2758.1  1.1      48 % (Q: 96.0 %/S: 94.9 %)     ABC transporter, membrane spanning protein (xxxX) {Streptomyces coelicolor}
2759.1  1.1      45 % (Q: 97.1 %/S: 97.4 %)     ABC transporter, membrane spanning protein (xxxX) {Xylella fastidiosa}
2513.1  2.1      35 % (Q: 65.1 %/S: 94.1 %)     ABC transporter, membrane spanning protein [C4-dicarboxylate] (xxxX) {Pseudomonas aeruginosa}
4596.1  2.1      54 % (Q: 99.5 %/S: 99.5 %)     ABC transporter, membrane spanning protein [C4-dicarboxylate] {}
4597.1  2.1      42 % (Q: 77.5 %/S: 96.4 %)     ABC transporter, membrane spanning protein [C4-dicarboxylate] (xxxX) {Bacillus halodurans}
4617.1  2.1      37 % (Q: 98.1 %/S: 98.1 %)     ABC transporter, membrane spanning protein [C4-dicarboxylate] (xxxX) {Bacillus halodurans}
4618.1  2.1      23 % (Q: 75.4 %/S: 75.4 %)     ABC transporter, membrane spanning protein [C4-dicarboxylate] {}
4665.1  2.1      28 % (Q: 98.6 %/S: 99.3 %)     ABC transporter, membrane spanning protein [C4-dicarboxylate] (xxxX) {Salmonella typhimurium}
3114.1  2.1      41 % (Q: 93.8 %/S:107.0 %)     ABC transporter, membrane spanning protein [dicarboxylate] (xxxX) {Vibrio cholerae}
3056.1  2.1      55 % (Q: 87.5 %/S: 97.6 %)     ABC transporter, membrane spanning protein [glycerol-3-phosphate] (ugpA) {Escherichia coli K12}
3057.1  2.1      58 % (Q:100.0 %/S:100.4 %)     ABC transporter, membrane spanning protein [glycerol-3-phosphate] (ugpE) {Escherichia coli K12}
3930.1  3.1      39 % (Q:100.0 %/S: 90.0 %)     ABC transporter, membrane spanning protein [glycerol-3-phosphate] (ugpE) {Streptomyces coelicolor A3(2)}
3931.1  3.1      35 % (Q: 98.3 %/S: 86.9 %)     ABC transporter, membrane spanning protein [glycerol-3-phosphate] (ugpA) {Streptomyces coelicolor A3(2)}
4284.1  1.1      35 % (Q: 93.3 %/S: 97.4 %)     ABC transporter, membrane spanning protein [maltose] (malG) {Bacillus halodurans}
4285.1  1.1      36 % (Q: 96.6 %/S: 96.6 %)     ABC transporter, membrane spanning protein [maltose] (malF) {Sinorhizobium meliloti}
1456.1  4.1      39 % (Q: 86.0 %/S: 91.9 %)     ABC transporter, membrane spanning protein [ribose] (rbsC) {Bacillus subtilis}
1986.1  1.1      43 % (Q: 98.5 %/S:103.4 %)     ABC transporter, membrane spanning protein [ribose] (rbsC) {Bacillus halodurans}
2046.1  1.1      51 % (Q: 92.0 %/S: 46.1 %)     ABC transporter, membrane spanning protein [ribose] (rbsC) {Streptomyces coelicolor A3(2)}
3067.1  2.1      56 % (Q: 92.3 %/S: 94.0 %)     ABC transporter, membrane spanning protein [ribose] (xxxX) {Vibrio cholerae}
3087.1  2.1      61 % (Q: 90.5 %/S: 92.4 %)     ABC transporter, membrane spanning protein [ribose] (xxxX) {Escherichia coli K12}
3088.1  2.1      60 % (Q: 95.4 %/S: 96.3 %)     ABC transporter, membrane spanning protein [ribose] (xxxX) {Escherichia coli K12}
3639.1  2.1      34 % (Q: 99.4 %/S: 95.1 %)     ABC transporter, membrane spanning protein [ribose] (rbsC) {Vibrio cholerae}
3640.1  2.1      31 % (Q: 93.5 %/S: 91.2 %)     ABC transporter, membrane spanning protein [ribose] (rbsC) {Escherichia coli}
4039.1  2.1      40 % (Q: 96.0 %/S: 97.8 %)     ABC transporter, membrane spanning protein [ribose] (rbsC) {Bacillus subtilus}
4086.1  2.1      49 % (Q: 90.8 %/S: 92.2 %)     ABC transporter, membrane spanning protein [ribose] (rbsC) {Bacillus halodurans}
2222.1  1.1      60 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [sn-Glycerol-3-phosphate] (ugpE) {Escherichia coli}
2223.1  1.1      51 % (Q: 99.3 %/S: 99.3 %)     ABC transporter, membrane spanning protein [sn-Glycerol-3-phosphate] (ugpA) {Escherichia coli}
4564.1  2.1      54 % (Q:100.0 %/S:100.7 %)     ABC transporter, membrane spanning protein [sn-Glycerol-3-phosphate] (ugpA) {Mesorhizobium loti}
4565.1  2.1      55 % (Q:103.4 %/S:100.0 %)     ABC transporter, membrane spanning protein [sn-Glycerol-3-phosphate] (ugpE) {Mesorhizobium loti}
909.1   2.1      75 % (Q:100.0 %/S: 99.0 %)     ABC transporter, membrane spanning protein [sorbitol/mannitol] (xxxX) {Mesorhizobium loti}
910.1   2.1      80 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [sorbitol/mannitol] (xxxX) {Mesorhizobium loti}
1689.1  2.1      74 % (Q: 86.7 %/S:100.0 %)     ABC transporter, membrane spanning protein [sorbitol/mannitol] (xxxX) {Mesorhizobium loti}
1690.1  2.1      81 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [sorbitol/mannitol] (xxxX) {Mesorhizobium loti}
3698.1  2.1      90 % (Q: 89.8 %/S: 89.5 %)     ABC transporter, membrane spanning protein [sugarl] (xxxX) {Treponema pallidum}
3807.1  2.1      31 % (Q: 87.1 %/S:114.1 %)     ABC transporter, membrane spanning protein [sugars] (xxxX) {Thermotoga maritima}
761.1   1.1      54 % (Q: 96.1 %/S: 94.8 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Escherichia coli}
913.1   2.1      66 % (Q: 95.3 %/S: 93.3 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Mesorhizobium loti}
914.1   2.1      61 % (Q: 92.6 %/S:101.6 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Mesorhizobium loti}
1063.1  1.1      83 % (Q: 97.6 %/S: 99.7 %)     ABC transporter, membrane spanning protein [sugar] (frcC) {Sinorhizobium meliloti}
1130.1  2.1      34 % (Q: 90.7 %/S: 99.7 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Xylella fastidiosa}
1131.1  2.1      42 % (Q: 79.4 %/S: 81.2 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Thermotoga maritima}
1283.1  1.1      72 % (Q: 99.7 %/S:100.0 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Pseudomonas aeruginosa}
1284.1  1.1      69 % (Q:100.3 %/S: 97.1 %)     ABC transporter, membrane spanning protein [sugar] {}
1539.1  3.1      34 % (Q: 88.9 %/S: 95.2 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Yersinia pestis}
1540.1  3.1      37 % (Q: 96.8 %/S: 95.7 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Yersinia pestis}
2097.1  2.1      83 % (Q: 99.3 %/S: 94.6 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Mesorhizobium loti}
2116.1  2.1      59 % (Q: 96.0 %/S: 95.0 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Mesorhizobium loti}
2491.1  2.1      40 % (Q: 92.6 %/S: 96.7 %)     ABC transporter, membrane spanning protein [sugar] (malG) {Bacillus halodurans}
2492.1  2.1      37 % (Q: 94.2 %/S: 88.7 %)     ABC transporter, membrane spanning protein [sugar] (malF) {Deinococcus radiodurans}
2676.1  2.1      36 % (Q: 89.7 %/S: 90.8 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Streptomyces coelicolor A3(2)}
2677.1  2.1      43 % (Q: 84.9 %/S: 81.2 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Thermotoga maritima}
2860.1  3.1      36 % (Q: 90.8 %/S: 96.0 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Thermotoga maritima}
2861.1  3.1      40 % (Q: 61.9 %/S: 75.2 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Synechocystis sp}
3097.1  2.1      32 % (Q: 95.4 %/S: 89.7 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Thermotoga maritima}
3098.1  2.1      36 % (Q: 98.4 %/S: 96.2 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Streptomyces coelicolor A3(2)}
3167.1  1.1      40 % (Q: 85.9 %/S: 93.7 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Yersinia pestis}
3168.1  1.1      35 % (Q: 94.8 %/S: 98.5 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Pseudomonas fluorescens}
3266.1  1.1     100 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [sugar] (gguB) {Agrobacterium tumefaciens}
3370.1  2.1      35 % (Q: 93.0 %/S: 97.0 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Thermotoga maritima}
3371.1  2.1      39 % (Q: 94.3 %/S: 97.8 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Synechocystis sp}
3685.1  2.1      37 % (Q: 88.6 %/S: 93.9 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Bacillus halodurans}
3699.1  2.1      82 % (Q: 99.7 %/S: 99.7 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Thermococcus litoralis}
3769.1  2.1      37 % (Q: 95.3 %/S: 97.7 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Mycobacterium tuberculosis}
3770.1  2.1      39 % (Q: 95.4 %/S: 89.3 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Streptomyces coelicolor A3(2)}
3808.1  2.1      42 % (Q: 95.7 %/S: 98.6 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Thermotoga maritima}
3909.1  3.1      64 % (Q: 91.8 %/S: 94.0 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Amycolatopsis orientalis}
3910.1  3.1      67 % (Q: 91.6 %/S: 92.2 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Thermoanaerobacterium thermosulfurigenes}
4040.1  2.1      34 % (Q: 99.0 %/S: 94.0 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Rhizobium tropici}
4051.1  2.1      38 % (Q: 93.0 %/S: 86.9 %)     ABC transporter, membrane spanning protein [sugar] (thuF) {Streptomyces coelicolor}
4052.1  2.1      35 % (Q: 97.8 %/S: 97.5 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Bacillus halodurans}
4108.1  2.1      77 % (Q: 91.4 %/S:100.0 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Escherichia coli}
4109.1  2.1      79 % (Q: 99.7 %/S: 99.0 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Agrobacterium rhizogenes}
4500.1  2.1      62 % (Q: 97.4 %/S: 92.9 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Sphingomonas sp}
4501.1  2.1      67 % (Q: 98.0 %/S: 98.0 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Sphingomonas sp}
4502.1  2.1      56 % (Q: 97.7 %/S: 97.0 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Sphingomonas sp}
4536.1  2.1      60 % (Q: 94.9 %/S: 94.1 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Mesorhizobium loti}
4567.1  2.1      57 % (Q: 96.7 %/S: 95.0 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Mesorhizobium loti}
4568.1  2.1      57 % (Q: 98.0 %/S: 96.0 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Mesorhizobium loti}
4578.1  2.1      51 % (Q: 95.5 %/S: 98.9 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Bacillus halodurans}
4580.1  2.1      54 % (Q: 99.3 %/S: 92.1 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Bacillus halodurans}
4593.1  2.1      56 % (Q: 96.6 %/S: 94.7 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Bacillus halodurans}
4594.1  2.1      62 % (Q: 99.3 %/S: 98.3 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Bacillus subtilis}
4610.1  2.1      77 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Mesorhizobium loti}
4611.1  2.1      80 % (Q: 99.3 %/S: 99.3 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Mesorhizobium loti}
4651.1  2.1      37 % (Q: 88.7 %/S: 96.5 %)     ABC transporter, membrane spanning protein [sugar] (ydeZ) {Bacillus halodurans}
4652.1  2.1      33 % (Q: 98.5 %/S: 99.1 %)     ABC transporter, membrane spanning protein [sugar] (RBSC) {Bacillus halodurans}
4734.1  2.1      40 % (Q: 93.4 %/S: 97.2 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Escherichia coli}
4735.1  2.1      45 % (Q: 90.5 %/S: 94.7 %)     ABC transporter, membrane spanning protein [sugar] (xxxX) {Streptomyces coelicolor}
2085.1  2.1      80 % (Q:101.2 %/S:100.0 %)     ABC transporter, membrane spanning protein [trehalose/maltose] (thuF) {Sinorhizobium meliloti}
2086.1  2.1      86 % (Q: 94.1 %/S: 98.6 %)     ABC transporter, membrane spanning protein [trehalose/maltose] (thuG) {Sinorhizobium meliloti}
2551.1  2.1      69 % (Q: 98.9 %/S: 97.5 %)     ABC transporter, membrane spanning protein [xylose] (xylH) {Bacillus sp}
506.1   2.1      62 % (Q: 99.8 %/S: 99.2 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Rhizobium leguminosarum bv. trifolii}
1355.1  1.1      43 % (Q:102.3 %/S:101.6 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Pseudomonas aeruginosa}
1926.1  3.1      52 % (Q:107.5 %/S: 98.5 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Mycobacterium tuberculosis}
2095.1  2.1      67 % (Q: 98.9 %/S: 98.4 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Mesorhizobium loti}
2274.1  1.1      73 % (Q:100.0 %/S: 99.7 %)     ABC transporter, nucleotide binding/ATPase protein (aglK) {sinorhizobium meliloti}
2494.1  2.1      55 % (Q:102.8 %/S:100.8 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Mesorhizobium loti}
2523.1  2.1      42 % (Q: 94.7 %/S: 92.9 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Thermotoga maritima}
2760.1  1.1      46 % (Q:100.6 %/S: 90.1 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Pseudomonas fluorescens}
4053.1  2.1      54 % (Q: 99.4 %/S:101.1 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Mesorhizobium loti}
4534.1  2.1      60 % (Q: 93.7 %/S: 94.9 %)     ABC transporter, nucleotide binding/ATPase protein (xxx) {Mesorhizobium loti}
4535.1  2.1      64 % (Q: 88.8 %/S: 92.9 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Mesorhizobium loti}
2512.1  2.1      67 % (Q: 97.7 %/S: 96.9 %)     ABC transporter, nucleotide binding/ATPase protein [C4-dicarboxylate] (xxxX) {Escherichia coli}
3113.1  2.1      25 % (Q: 89.5 %/S: 26.8 %)     ABC transporter, nucleotide binding/ATPase protein [dicarboxylate] (xxxX) {Pseudomonas aeruginosa}
3058.1  2.1      51 % (Q:102.8 %/S: 98.4 %)     ABC transporter, nucleotide binding/ATPase protein [glycerol-3-phosphate] (ugpC) {Escherichia coli K12}
3928.1  3.1      47 % (Q:105.8 %/S:100.3 %)     ABC transporter, nucleotide binding/ATPase protein [glycerol-3-phosphate] (ugpC) {Xylella fastidiosa}
4282.1  1.1      53 % (Q: 98.9 %/S: 98.9 %)     ABC transporter, nucleotide binding/ATPase protein [maltose/maltodextrin] (malK) {Pseudomonas aeruginosa}
1455.1  4.1      35 % (Q: 97.3 %/S: 98.3 %)     ABC transporter, nucleotide binding/ATPase protein [ribose] (rbsA) {Bacillus subtilis}
1985.1  1.1      52 % (Q: 97.0 %/S: 94.8 %)     ABC transporter, nucleotide binding/ATPase protein [ribose] (rbsA) {Streptomyces coelicolor A3(2)}
2048.1  1.1      47 % (Q: 99.8 %/S: 98.4 %)     ABC transporter, nucleotide binding/ATPase protein [ribose] (rbsA) {Bacillus halodurans}
3068.1  2.1      53 % (Q: 95.5 %/S: 91.3 %)     ABC transporter, nucleotide binding/ATPase protein [ribose] (xxxX) {Vibrio cholerae}
3086.1  2.1      59 % (Q: 97.2 %/S: 98.6 %)     ABC transporter, nucleotide binding/ATPase protein [ribose] (xxxX) {Escherichia coli K12}
3638.1  2.1      45 % (Q: 99.2 %/S: 95.7 %)     ABC transporter, nucleotide binding/ATPase protein [ribose] (rbsA) {Streptomyces coelicolor A3(2)}
4087.1  2.1      45 % (Q: 98.8 %/S:100.4 %)     ABC transporter, nucleotide binding/ATPase protein [ribose] (rbsA) {Bacillus subtilis}
2221.1  1.1      53 % (Q: 97.3 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [sn-Glycerol-3-phosphate] (ugpC) {Escherichia coli}
4566.1  2.1      63 % (Q: 96.2 %/S: 98.1 %)     ABC transporter, nucleotide binding/ATPase protein [sn-Glycerol-3-phosphate] (ugpC) {Mesorhizobium loti}
911.1   2.1      73 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [sorbitol/mannitol] (xxxX) {Rhodobacter sphaeroides}
3771.1  2.1      62 % (Q:102.0 %/S: 90.1 %)     ABC transporter, nucleotide binding/ATPase protein [sugars] (xxxX) {Rhizobium sp. NGR234}
40.1    2.1      53 % (Q: 99.6 %/S: 47.7 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Bacillus halodurans}
912.1   2.1      59 % (Q: 99.4 %/S:100.3 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Mesorhizobium loti}
1064.1  1.1      91 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (frcA) {Sinorhizobium meliloti}
1132.1  2.1      56 % (Q:101.1 %/S:101.1 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Pseudomonas fluorescens}
1285.1  1.1      64 % (Q:100.6 %/S:100.2 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Pseudomonas aeruginosa}
1541.1  3.1      50 % (Q:101.0 %/S: 85.0 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Pseudomonas aeruginosa}
1691.1  2.1      74 % (Q:100.0 %/S: 99.4 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Rhodobacter sphaeroides}
2675.1  2.1      54 % (Q:100.5 %/S:100.5 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Pseudomonas fluorescens}
3096.1  2.1      58 % (Q: 99.2 %/S: 90.1 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Rhizobium sp. NGR234}
3169.1  1.1      61 % (Q:101.4 %/S: 90.8 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Rhizobium sp. NGR234}
3267.1  1.1     100 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (gguA) {Agrobacterium tumefaciens}
3373.1  2.1      52 % (Q:104.9 %/S: 99.5 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Thermotoga maritima}
3686.1  2.1      42 % (Q: 97.8 %/S: 99.2 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Bacillus halodurans}
3700.1  2.1      73 % (Q:100.0 %/S:100.3 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Aeropyrum pernix}
3701.1  2.1      67 % (Q: 98.9 %/S: 98.1 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Pseudomonas aeruginosa}
3806.1  2.1      48 % (Q: 96.8 %/S: 98.9 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Pyrococcus horikoshii}
3907.1  3.1      59 % (Q: 94.1 %/S: 97.2 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Agrobacterium radiobacter}
4041.1  2.1      38 % (Q: 78.0 %/S: 70.9 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] {}
4110.1  2.1      63 % (Q: 99.2 %/S: 99.6 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Bacillus stearothermophilus}
4499.1  2.1      60 % (Q: 98.4 %/S:100.6 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Sphingomonas sp}
4570.1  2.1      55 % (Q:100.8 %/S: 99.2 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Sinorhizobium meliloti}
4577.1  2.1      56 % (Q:100.8 %/S:100.3 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Mesorhizobium loti}
4592.1  2.1      54 % (Q:103.6 %/S:101.1 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Klebsiella oxytoca}
4609.1  2.1      69 % (Q:100.3 %/S:100.8 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Mesorhizobium loti}
4653.1  2.1      37 % (Q: 98.8 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Thermotoga maritima}
4736.1  2.1      42 % (Q: 96.4 %/S: 93.0 %)     ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX) {Thermotoga maritima}
2087.1  2.1      76 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [trehalose/maltose] (thuK) {Sinorhizobium meliloti}
2550.1  2.1      83 % (Q: 97.3 %/S: 92.3 %)     ABC transporter, nucleotide binding/ATPase protein [xylose] (xylG) {Streptomyces coelicolor A3(2)}
1105.1  1.1      68 % (Q: 99.1 %/S:101.2 %)     ABC transporter, substrate binding protein [nitrate/sulfonate/taurine/bicarbonate] (xxxX) {Thermotoga maritima}
3199.1  1.1      40 % (Q: 97.4 %/S:100.0 %)     benzoate transport protein (xxxX) {Escherichia coli}
2477.1  2.1      82 % (Q:100.0 %/S:101.6 %)     C4-dicarboxylate transport protein (dctA) {Sinorhizobium meliloti}
2620.1  1.1      49 % (Q:100.7 %/S: 98.4 %)     long-chain fatty acid transport protein (fadL) {Pseudomonas aeruginosa}
1288.1  1.1      69 % (Q: 99.4 %/S: 96.9 %)     malonate transporter (xxxX) {Sinorhizobium meliloti}
691.1   2.1      65 % (Q: 90.0 %/S: 96.8 %)     MFS permease [alpha-ketoglutarate] (kgtP) {Escherichia coli}
3061.1  2.1      48 % (Q: 96.1 %/S: 92.8 %)     MFS permease [monocarboxylate] (xxxX) {Streptomyces coelicolor}
423.1   2.1      23 % (Q: 98.0 %/S: 95.3 %)     MFS permease [sugar] (setA) {Escherichia coli}
3154.1  1.1      74 % (Q:100.3 %/S: 97.9 %)     MFS permease [sugar] (mtbA) {Bradyrhizobium japonicum}
4276.1  1.1      25 % (Q: 93.8 %/S: 96.7 %)     MFS permease [sugar] (xxxX) {Deinococcus radiodurans}
2813.1  1.1      58 % (Q: 93.5 %/S: 94.5 %)     MFS permease[proline/betaine] (tphA) {Campylobacter jejuni}
2201.1  1.1      71 % (Q:100.0 %/S: 99.4 %)     nitrogen regulatory IIA protein (ptsN) {Klebsiella pneumoniae}
2866.1  3.1      59 % (Q:112.2 %/S: 95.4 %)     permease component of C4 dicarboxylate transporter (xxxX) {Synechocystis sp}
2867.1  3.1      55 % (Q: 75.2 %/S: 86.1 %)     permease component of C4 dicarboxylate transporter (xxxX) {Synechocystis sp}
1007.1  1.1      71 % (Q: 93.4 %/S: 86.7 %)     phosphocarrier protein HPr (ptsH) {Alcaligenes eutrophus}
4229.1  2.1      70 % (Q:100.7 %/S:100.5 %)     phosphoenolpyruvate-protein phosphotransferase (ptsI) {Pseudomonas aeruginosa}
2152.1  1.1      69 % (Q: 90.0 %/S: 99.4 %)     polysaccharide export protein (gumB) {Vibrio cholerae}
4080.1  2.1      36 % (Q: 97.7 %/S: 75.7 %)     polysaccharide export protein (bexD) {Haemophilus influenzae}
1008.1  1.1      72 % (Q:100.0 %/S:100.0 %)     PTS system, IIA component (xxxX) {Escherichia coli}
3268.1  1.1     100 % (Q:100.0 %/S:100.0 %)     sugar binding protein (chvE) {Agrobacterium tumefaciens}
2088.1  2.1      82 % (Q:100.0 %/S: 97.4 %)     trehalose utilization-related protein (thuA) {Sinorhizobium meliloti}
2089.1  2.1      76 % (Q: 99.4 %/S: 95.1 %)     trehalose utilization-related protein (ThuB) {Sinorhizobium meliloti}

8.4. TRANSPORT AND BINDING PROTEINS/CATIONS (87 genes)

1306.1  1.1      86 % (Q:103.3 %/S:100.0 %)     ABC transporter subunit (sufB) {Pectobacterium chrysanthemi}
986.1   1.1      37 % (Q: 97.5 %/S: 97.5 %)     ABC transporter, membrane spanning protein (nikB) {Escherichia coli}
1324.1  1.1      37 % (Q: 94.3 %/S:100.0 %)     ABC transporter, membrane spanning protein (xxxX) {Deinococcus radiodurans}
2290.1  1.1      43 % (Q: 96.0 %/S: 98.3 %)     ABC transporter, membrane spanning protein (xxxX) {Vibrio cholerae}
2745.1  1.1      39 % (Q: 99.6 %/S: 99.8 %)     ABC transporter, membrane spanning protein (fbpA3) {Synecocystis sp}
3140.1  1.1      51 % (Q: 99.7 %/S:100.9 %)     ABC transporter, membrane spanning protein (xxxX) {Bacillus halodurans}
3141.1  1.1      46 % (Q: 96.3 %/S: 98.4 %)     ABC transporter, membrane spanning protein (xxxX) {Bacillus subtilis}
684.1   2.1      41 % (Q: 98.6 %/S: 97.7 %)     ABC transporter, membrane spanning protein [ferrichrome] (fhuB) {Escherichia coli}
3127.1  1.1      60 % (Q: 95.3 %/S: 94.0 %)     ABC transporter, membrane spanning protein [hemin] (hmuU) {Deinococcus radiodurans}
4409.1  2.1      44 % (Q: 93.8 %/S: 91.1 %)     ABC transporter, membrane spanning protein [iron (III) dicitrate] (fecD) {Synechocystis sp. (strain PCC 6803)}
1834.1  2.1      42 % (Q: 98.0 %/S: 90.8 %)     ABC transporter, membrane spanning protein [iron (III)] (xxxX) {Halobacterium sp. NRC-1}
1704.1  2.1      57 % (Q: 95.4 %/S: 96.1 %)     ABC transporter, membrane spanning protein [iron transport] (sitD) {Salmonella typhimurium}
4407.1  2.1      29 % (Q:102.9 %/S:100.0 %)     ABC transporter, membrane spanning protein [iron(III) dicitrate] (fecB) {Synechocystis sp. (strain PCC 6803)}
4408.1  2.1      48 % (Q: 90.3 %/S: 91.8 %)     ABC transporter, membrane spanning protein [iron(III) dicitrate] (fecC) {Synechocystis sp. (strain PCC 6803)}
1705.1  2.1      74 % (Q: 99.3 %/S: 99.3 %)     ABC transporter, membrane spanning protein [iron] (sitC) {Salmonella typhimurium}
1828.1  2.1      37 % (Q: 97.2 %/S: 98.9 %)     ABC transporter, membrane spanning protein [iron] (xxxX) {Methanococcus jannaschii}
2897.1  3.1      52 % (Q: 87.8 %/S: 89.3 %)     ABC transporter, membrane spanning protein [iron] (fepD) {Yersinia enterocolitica}
2898.1  3.1      54 % (Q:100.3 %/S: 97.4 %)     ABC transporter, membrane spanning protein [iron] (fepG) {Yersinia enterocolitica}
4701.1  2.1      44 % (Q: 81.6 %/S: 86.6 %)     ABC transporter, membrane spanning protein [iron] (afuB) {Actinobacillus pleuropneumoniae}
4248.1  1.1      76 % (Q: 97.0 %/S: 97.4 %)     ABC transporter, membrane spanning protein [molybdate] (modB) {Escherichia coli K12}
1270.1  1.1      55 % (Q: 93.4 %/S: 96.9 %)     ABC transporter, membrane spanning protein [zinc] (znuB) {E. coli}
1305.1  1.1      81 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein (sufC) {Pectobacterium chrysanthemi}
2747.1  1.1      49 % (Q: 98.3 %/S: 95.8 %)     ABC transporter, nucleotide binding/ATPase protein (fbpA1) {Rhodobacter capsulatus}
3142.1  1.1      56 % (Q: 99.6 %/S: 99.6 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Bacillus halodurans}
1325.1  1.1      52 % (Q: 93.4 %/S: 93.4 %)     ABC transporter, nucleotide binding/ATPase protein [cobalt] (xxxX) {Deinococcus radiodurans}
683.1   2.1      60 % (Q: 95.5 %/S: 97.0 %)     ABC transporter, nucleotide binding/ATPase protein [ferrichrome] (fhuC) {Escherichia coli}
3126.1  1.1      50 % (Q:100.4 %/S: 99.2 %)     ABC transporter, nucleotide binding/ATPase protein [hemin] (hmuV) {Deinococcus radiodurans}
4410.1  2.1      54 % (Q: 95.5 %/S: 94.1 %)     ABC transporter, nucleotide binding/ATPase protein [iron (III) dicitrate] (fecE) {Bacillus halodurans}
2899.1  3.1      67 % (Q: 94.0 %/S: 87.7 %)     ABC transporter, nucleotide binding/ATPase protein [iron-siderophore] (fepC) {Yersinia enterocolitica}
1706.1  2.1      67 % (Q: 90.0 %/S: 98.9 %)     ABC transporter, nucleotide binding/ATPase protein [iron] (sitB) {Salmonella typhimurium}
1827.1  2.1      33 % (Q:102.4 %/S:100.8 %)     ABC transporter, nucleotide binding/ATPase protein [iron] (fecE) {Methanococcus jannaschii}
1833.1  2.1      47 % (Q: 94.7 %/S: 99.6 %)     ABC transporter, nucleotide binding/ATPase protein [iron] (fecE) {Serratia sp. ATCC39006}
4700.1  2.1      50 % (Q: 99.2 %/S: 99.7 %)     ABC transporter, nucleotide binding/ATPase protein [iron] (afuC) {Vibrio cholerae}
4249.1  1.1      55 % (Q: 99.4 %/S: 96.2 %)     ABC transporter, nucleotide binding/ATPase protein [molybdenum] (modC) {Pseudomonas aeruginosa}
1269.1  1.1      50 % (Q: 79.9 %/S: 95.2 %)     ABC transporter, nucleotide binding/ATPase protein [zinc] (znuC) {E. coli}
87.1    1.1      41 % (Q: 96.3 %/S:102.3 %)     Acr family transporter (xxxX) {Bacillus halodurans}
303.1   1.1      39 % (Q: 97.5 %/S: 97.6 %)     AcrB/AcrD/AcrF family protein (xxxX) {Haemophilus influenzae}
3302.1  1.1      62 % (Q:105.6 %/S:100.0 %)     ammonium transporter (amtB) {Rhizobium etli}
289.1   1.1      64 % (Q: 89.3 %/S: 88.7 %)     biopolymer transport protein (exbB) {Pseudomonas putida}
290.1   1.1      66 % (Q: 97.0 %/S: 93.1 %)     biopolymer transport protein (exbD) {Brucella melitensis}
952.1   1.1      76 % (Q: 91.3 %/S:100.9 %)     Ca2+/H+ antiporter (chaA) {Rhizobium leguminosarum}
882.1   1.1      57 % (Q: 99.3 %/S: 92.7 %)     cation efflux system component (xxxX) {Vibrio cholerae}
1402.1  1.1      46 % (Q: 99.7 %/S:102.5 %)     cation efflux system protein (xxxX) {Bradyrhizobium japonicum}
3205.1  1.1      59 % (Q: 89.0 %/S: 91.9 %)     cation efflux system protein (xxxX) {Deinococcus radiodurans}
3799.1  2.1      87 % (Q: 97.0 %/S:100.0 %)     cation efflux system protein (xxxX) {Xylella fastidiosa}
4275.1  1.1      50 % (Q: 95.2 %/S: 97.6 %)     copper homeostasis protein (cutC) {Escherichia coli}
715.1   1.1      57 % (Q: 96.7 %/S:100.7 %)     copper transporting ATPase (xxxX) {Sinorhizobium meliloti}
597.1   1.1      33 % (Q: 79.5 %/S: 79.5 %)     divalent cation transporter {}
401.1   1.1      67 % (Q: 95.8 %/S: 94.4 %)     glutathione-regulated potassium-efflux system protein (kefB) {Haemophilus influenzae}
133.1   1.1      85 % (Q:100.0 %/S: 99.9 %)     H+ translocating pyrophosphate synthase (rrpP) {Rhodospirillum rubrum}
989.1   1.1      70 % (Q: 96.8 %/S: 97.8 %)     heavy-metal transporting P-type ATPase (xxxX) {Sinorhizobium meliloti}
304.1   1.1      28 % (Q: 93.3 %/S: 90.7 %)     HlyD family secretion protein (xxxX) {Vibrio cholerae}
686.1   2.1      41 % (Q: 97.2 %/S: 86.8 %)     hydroxamate-type ferrisiderophore receptor (fhuA) {Pseudomonas aeruginosa}
890.1   1.1      60 % (Q: 94.5 %/S: 95.2 %)     magnesium transport protein (mgtE) {Synechocystis sp}
1247.1  1.1      73 % (Q: 96.0 %/S: 97.0 %)     magnesium transport protein (mgtE) {Neisseria meningitidis MC58}
616.1   1.1      46 % (Q: 88.3 %/S: 93.2 %)     magnesium/cobalt transport protein (corA) {Pseudomonas aeruginosa}
2608.1  1.1      60 % (Q: 95.2 %/S: 95.6 %)     manganese transport protein (mntH) {Pseudomonas aeruginosa}
1831.1  2.1      31 % (Q: 93.1 %/S: 97.3 %)     methyltransferase (xxxX) {Methanosarcina barkeri}
42.1    1.1      42 % (Q: 87.4 %/S: 92.2 %)     Na+/H+ antiporter (mnhD) {Vibrio cholerae}
43.1    1.1      40 % (Q: 94.3 %/S: 94.9 %)     Na+/H+ antiporter (mnhE) {Bacillus firmus}
44.1    1.1      57 % (Q:100.0 %/S:104.1 %)     Na+/H+ antiporter (mnhF) {Sinorhizobium meliloti}
45.1    1.1      65 % (Q: 93.6 %/S: 88.8 %)     Na+/H+ antiporter (mnhG) {Rhizobium meliloti}
1417.1  1.1      42 % (Q: 91.0 %/S: 80.6 %)     Na+/H+ antiporter (mnhA) {Vibrio cholerae}
1418.1  1.1      45 % (Q: 97.1 %/S: 15.2 %)     Na+/H+ antiporter (mnhB) {Vibrio cholerae}
1419.1  1.1      55 % (Q: 91.2 %/S: 97.4 %)     Na+/H+ antiporter (mnhC) {Vibrio cholerae}
4450.1  2.1      58 % (Q:100.2 %/S: 99.2 %)     Na+/H+ antiporter (xxxX) {Escherichia coli}
4530.1  2.1      35 % (Q: 99.6 %/S:101.5 %)     Na+/H+ antiporter (xxxX) {Mesorhizobium loti}
491.1   1.1      51 % (Q: 86.0 %/S:103.9 %)     P type cation (metal) transporter, ATPase component (xxxX) {Deinococcus radiodurans}
1805.1  1.1      62 % (Q: 96.8 %/S: 97.8 %)     PH Adaption potassium efflux system (phaF) {sinorhizobium meliloti}
1801.1  1.1      56 % (Q: 97.0 %/S:100.3 %)     pH adaption potassium efflux system protein (phaA) {Rhizobium meliloti}
1802.1  1.1      73 % (Q:101.8 %/S: 98.3 %)     pH adaption potassium efflux system protein (phaC) {Rhizobium meliloti}
1803.1  1.1      61 % (Q: 98.0 %/S: 98.0 %)     pH adaption potassium efflux system protein (phaD) {Rhizobium meliloti}
1804.1  1.1      47 % (Q:100.0 %/S: 99.4 %)     phaE protein (phaE) {sinorhizobium meliloti}
3481.1  1.1      45 % (Q: 83.0 %/S: 86.0 %)     potassium efflux system KEFA (kefA) {Pseudomonas aeruginosa}
1806.1  1.1      53 % (Q: 92.1 %/S: 90.5 %)     potassium efflux system protein (phaG) {sinorhizobium meliloti}
615.1   1.1      66 % (Q: 96.1 %/S: 97.0 %)     potassium uptake protein (xxxX) {Xylella fastidiosa}
981.1   1.1      63 % (Q: 99.8 %/S: 91.7 %)     potassium uptake protein (trkH) {Pseudomonas aeruginosa}
1526.1  1.1      37 % (Q:100.9 %/S:101.1 %)     potassium uptake protein (trkA) {Pseudomonas aeruginosa}
1922.1  3.1      64 % (Q:100.0 %/S:100.6 %)     potassium uptake protein (kup) {Xylella fastidiosa}
271.1   2.1      82 % (Q:100.0 %/S:100.0 %)     potassium-transporting ATPase A chain (kdpA) {Pseudomonas aeruginosa}
270.1   2.1      83 % (Q:101.0 %/S:100.6 %)     potassium-transporting ATPase B chain (kdpB) {Mycobacterium tuberculosis}
269.1   2.1      72 % (Q: 98.9 %/S: 99.5 %)     potassium-transporting ATPase C chain (kdpC) {Mycobacterium tuberculosis}
291.1   1.1      32 % (Q: 86.0 %/S:103.1 %)     tonB protein {}
2894.1  3.1      36 % (Q: 99.4 %/S: 99.3 %)     TonB-dependent receptor (xxxX) {Pseudomonas aeruginosa}
4406.1  2.1      25 % (Q: 88.7 %/S:103.7 %)     TonB-dependent receptor (xxxX) {pseudomonas qerugenosa}
1304.1  1.1      55 % (Q:100.2 %/S: 98.6 %)     transport system (sufD) {Pectobacterium chrysanthemi}
3203.1  1.1      48 % (Q: 98.5 %/S: 99.0 %)     urease accessory protein (ureJ) {Rhizobium leguminosarum bv. viciae}

8.5. TRANSPORT AND BINDING PROTEINS/NUCLEOSIDES, PURINES AND PYRIMIDINES (5 genes)

15.1    1.1      67 % (Q:100.3 %/S:100.3 %)     ABC transporter, membrane spanning protein [sugar/ribonucleotide] (xxxX) {Thermotoga maritima}
309.1   1.1      64 % (Q: 91.8 %/S: 94.7 %)     ABC transporter, membrane spanning protein [sugar/ribonucleotide] (xxxX) {Thermotoga maritima}
310.1   1.1      75 % (Q: 99.6 %/S: 97.8 %)     ABC transporter, nucleotide binding/ATPase protein [sugar/ribonucleotide] (xxxX) {Thermotoga maritima}
1672.1  1.1      76 % (Q: 99.4 %/S:100.3 %)     GTP-binding protein, Era family (xxxX) {Bradyrhizobium japonicum}
4547.1  2.1      60 % (Q: 97.3 %/S: 96.8 %)     uracil transport protein (uraA) {Escherichia coli}

8.6. TRANSPORT AND BINDING PROTEINS/PORINS (8 genes)

58.1    1.1      75 % (Q: 94.2 %/S: 97.8 %)     aquaporin (aqpZ) {Brucella abortus}
1571.1  3.1      77 % (Q: 99.6 %/S: 97.8 %)     aquaporin (aqpZ) {Brucella abortus}
1770.1  1.1      39 % (Q:104.8 %/S:104.8 %)     OmpA family protein (xxxX) {Pseudomonas resinovorans}
957.1   2.1      51 % (Q:104.8 %/S:104.2 %)     outer membrane protein (xxxX) {Rhizobium leguminosarum bv. viciae}
1683.1  1.1      55 % (Q:101.1 %/S:103.4 %)     outer membrane protein (xxxX) {Rhizobium leguminosarum bv. viciae}
1684.1  1.1      52 % (Q:101.1 %/S:104.5 %)     outer membrane protein (xxxX) {Rhizobium leguminosarum bv. viciae}
870.1   1.1      66 % (Q: 99.1 %/S:100.9 %)     porin (ompA) {Esherichia coli}
4076.1  2.1      34 % (Q: 84.8 %/S: 94.7 %)     porin {}

8.7. TRANSPORT AND BINDING PROTEINS/UNKNOWN SUBSTRATE (127 genes)

286.1   1.1      72 % (Q:100.0 %/S: 99.2 %)     ABC transporter, membrane spanning protein (xxxX) {Synechocystis sp}
459.1   1.1      45 % (Q: 94.2 %/S: 95.4 %)     ABC transporter, membrane spanning protein (xxxX) {Agrobacterium tumefaciens SAKURA}
920.1   2.1      76 % (Q: 97.9 %/S: 97.6 %)     ABC transporter, membrane spanning protein (xxxX) {Mesorhizobium loti}
1103.1  1.1      59 % (Q:100.0 %/S: 99.7 %)     ABC transporter, membrane spanning protein (xxxX) {Bacillus halodurans}
1104.1  1.1      76 % (Q: 86.2 %/S: 96.5 %)     ABC transporter, membrane spanning protein (xxxX) {Bacillus halodurans}
1404.1  1.1      51 % (Q: 84.8 %/S: 90.5 %)     ABC transporter, membrane spanning protein (xxxX) {Pseudomonas aeruginosa}
1661.1  1.1      31 % (Q: 89.7 %/S: 88.7 %)     ABC transporter, membrane spanning protein (xxxX) {Pseudomonas aeruginosa}
1722.1  2.1      56 % (Q: 95.0 %/S: 93.8 %)     ABC transporter, membrane spanning protein (xxxX) {Vibrio cholerae}
1934.1  3.1      76 % (Q: 93.2 %/S: 89.9 %)     ABC transporter, membrane spanning protein (attG) {Agrobacterium tumefaciens}
2040.1  1.1      69 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein (xxxX) {Pseudomonas aeruginosa}
2489.1  2.1      45 % (Q: 89.3 %/S: 91.7 %)     ABC transporter, membrane spanning protein (xxxX) {Pasteurella multocida}
2639.1  2.1      36 % (Q: 85.4 %/S: 82.9 %)     ABC transporter, membrane spanning protein (xxxX) {Thermotoga maritima}
2657.1  2.1      44 % (Q: 45.5 %/S: 99.2 %)     ABC transporter, membrane spanning protein (xxxX) {Brachyspira hyodysenteriae}
2665.1  2.1      29 % (Q: 86.4 %/S: 88.6 %)     ABC transporter, membrane spanning protein (xxxX) {Streptomyces coelicolor A3(2)}
2666.1  2.1      26 % (Q: 98.2 %/S: 97.9 %)     ABC transporter, membrane spanning protein (xxxX) {Streptomyces coelicolor A3(2)}
2807.1  1.1      67 % (Q: 95.2 %/S: 99.6 %)     ABC transporter, membrane spanning protein (xxxX) {Pseudomonas aeruginosa}
2808.1  1.1      71 % (Q: 96.2 %/S: 94.0 %)     ABC transporter, membrane spanning protein (xxxX) {Campylobacter jejuni}
3018.1  1.1      45 % (Q: 97.7 %/S: 97.2 %)     ABC transporter, membrane spanning protein (xxxX) {Halobacterium sp. NRC-1}
3357.1  2.1      62 % (Q: 97.8 %/S: 97.3 %)     ABC transporter, membrane spanning protein (xxxX) {Pseudomonas aeruginosa}
3487.1  1.1      58 % (Q: 95.2 %/S: 95.2 %)     ABC transporter, membrane spanning protein (xxxX) {Xylella fastidiosa}
3760.1  2.1      82 % (Q: 99.6 %/S:100.0 %)     ABC transporter, membrane spanning protein (xxxX) {Bacillus halodurans}
4342.1  1.1      63 % (Q: 98.3 %/S: 88.1 %)     ABC transporter, membrane spanning protein (xxxX) {Vibrio cholerae}
22.1    2.1      47 % (Q: 84.8 %/S: 86.7 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Rhizobium sp. NGR234}
110.1   1.1      74 % (Q: 98.6 %/S: 98.7 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Rickettsia prowazekii}
197.1   1.1      64 % (Q: 45.7 %/S: 96.7 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Deinococcus radiodurans}
287.1   1.1      75 % (Q: 98.9 %/S: 96.6 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Methanococcus jannaschii}
864.1   1.1      69 % (Q:100.5 %/S:100.8 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Xylella fastidiosa}
921.1   2.1      61 % (Q: 97.5 %/S: 99.3 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Mesorhizobium loti}
1042.1  1.1      60 % (Q: 98.4 %/S: 97.4 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Brucella abortus}
1043.1  1.1      59 % (Q: 98.4 %/S: 98.6 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Brucella abortus}
1299.1  1.1      67 % (Q: 93.7 %/S: 95.3 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Archaeoglobus fulgidus}
1403.1  1.1      57 % (Q: 71.8 %/S: 95.3 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Sinorhizobium meliloti}
1603.1  3.1      56 % (Q:100.0 %/S:100.6 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Escherichia coli}
1662.1  1.1      42 % (Q: 92.0 %/S: 84.9 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Pseudomonas aeruginosa}
1721.1  2.1      51 % (Q: 99.7 %/S:100.3 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Vibrio cholerae}
1935.1  3.1      81 % (Q:100.0 %/S: 83.0 %)     ABC transporter, nucleotide binding/ATPase protein (attE) {Agrobacterium tumefaciens}
2039.1  1.1      64 % (Q: 98.7 %/S: 96.8 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Escherichia coli}
2198.1  1.1      88 % (Q: 92.9 %/S: 96.9 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Rhizobium leguminosarum bv. phaseoli}
2389.1  1.1      67 % (Q:100.0 %/S:100.3 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Zymomonas mobilis}
2607.1  1.1      64 % (Q: 99.3 %/S: 99.3 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Bacillus subtilis}
2658.1  2.1      45 % (Q: 85.5 %/S: 83.4 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Brachyspira hyodysenteriae}
2667.1  2.1      45 % (Q:101.7 %/S: 99.2 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Rhodobacter sphaeroides}
2705.1  2.1      55 % (Q:100.0 %/S: 99.0 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Escherichia coli}
2809.1  1.1      63 % (Q: 99.1 %/S: 98.6 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Vibrio cholerae}
2812.1  1.1      36 % (Q:100.4 %/S:109.3 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Bacillus halodurans}
3019.1  1.1      47 % (Q:105.6 %/S: 98.9 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Agrobacterium tumefaciens}
3358.1  2.1      67 % (Q: 98.6 %/S: 99.6 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {e.coli}
3420.1  2.1      60 % (Q: 99.0 %/S: 99.1 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Rhizobium sp. NGR234}
3486.1  1.1      68 % (Q: 91.4 %/S: 94.4 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Pseudomonas aeruginosa}
3669.1  2.1      47 % (Q: 94.9 %/S: 77.2 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Sinorhizobium meliloti}
3674.1  2.1      90 % (Q: 99.8 %/S: 99.8 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Synechocystis sp}
3759.1  2.1      82 % (Q: 92.3 %/S: 91.3 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Methanococcus jannaschii}
3974.1  2.1      66 % (Q: 96.8 %/S: 96.8 %)     ABC transporter, nucleotide binding/ATPase protein (moaD) {Escherichia coli}
4160.1  2.1      34 % (Q: 90.4 %/S: 82.3 %)     ABC transporter, nucleotide binding/ATPase protein (cydD) {Providencia stuartii}
4161.1  2.1      50 % (Q: 57.2 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein (cydC) {Shewanella violacea}
4260.1  1.1      57 % (Q:100.1 %/S:100.2 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Bacillus subtilis}
4341.1  1.1      61 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Pseudomonas aeruginosa}
4350.1  1.1      72 % (Q: 94.1 %/S: 96.1 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Pseudomonas aeruginosa}
4455.1  2.1      64 % (Q: 98.3 %/S: 98.3 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Xylella fastidiosa}
4531.1  2.1      72 % (Q: 93.9 %/S: 89.4 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Mesorhizobium loti}
4750.1  2.1      58 % (Q: 97.9 %/S: 98.7 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Pseudomonas aeruginosa}
4751.1  2.1      69 % (Q:100.0 %/S: 99.8 %)     ABC transporter, nucleotide binding/ATPase protein (exsA) {Rhizobium meliloti}
4755.1  2.1      67 % (Q: 99.2 %/S: 97.1 %)     ABC transporter, nucleotide binding/ATPase protein {}
919.1   2.1      60 % (Q: 99.4 %/S:107.0 %)     ABC transporter, substrate binding protein (xxxX) {Mesorhizobium loti}
3485.1  1.1      47 % (Q:100.2 %/S:100.0 %)     ABC transporter, substrate binding protein (xxxX) {Caulobacter crescentus}
348.1   2.1      73 % (Q: 98.7 %/S: 99.2 %)     AcrB/AcrD/AcrF family protein (xxxX) {Pseudomonas aeruginosa}
1558.1  3.1      78 % (Q: 99.3 %/S: 99.9 %)     AcrB/AcrD/AcrF family protein (xxxX) {Pseudomonas aeruginosa, strain PAO1}
2501.1  2.1      56 % (Q: 98.9 %/S: 98.3 %)     AcrB/AcrD/AcrF family protein (xxxX) {Pseudomonas aeruginosa}
3147.1  1.1      69 % (Q: 96.4 %/S: 99.9 %)     AcrB/AcrD/AcrF family protein (mexF) {Burkholderia cepacia}
3385.1  2.1      53 % (Q: 98.3 %/S: 96.7 %)     AcrB/AcrD/AcrF family protein (xxxX) {Helicobacter pylori}
347.1   2.1      46 % (Q: 98.3 %/S: 99.7 %)     efflux protein (xxxX) {Xylella fastidiosa}
346.1   2.1      46 % (Q: 94.7 %/S: 96.3 %)     HlyD family secretion protein (xxxX) {Xylella fastidiosa}
428.1   3.1      41 % (Q: 95.9 %/S: 97.9 %)     HlyD family secretion protein (xxxX) {Pseudomonas aeruginosa}
1106.1  1.1      28 % (Q: 99.7 %/S:107.3 %)     HlyD family secretion protein (xxxX) {Zymomonas mobilis}
1298.1  1.1      46 % (Q: 97.9 %/S: 98.4 %)     HlyD family secretion protein (xxxX) {Campylobacter jejuni}
1557.1  3.1      58 % (Q: 91.4 %/S: 92.4 %)     HlyD family secretion protein (xxxX) {Pseudomonas aeruginosa}
2502.1  2.1      35 % (Q: 98.1 %/S: 99.0 %)     HlyD family secretion protein (xxxX) {Pseudomonas aeruginosa}
3146.1  1.1      43 % (Q: 93.4 %/S: 89.4 %)     HlyD family secretion protein (mexE) {Pseudomonas aeruginosa}
3359.1  2.1      55 % (Q: 98.3 %/S: 97.5 %)     HlyD family secretion protein (xxxX) {Pseudomonas aeruginosa}
134.1   1.1      61 % (Q: 96.6 %/S: 97.0 %)     MFS permease (xxxX) {Pseudomonas aeruginosa}
239.1   1.1      80 % (Q: 99.8 %/S: 96.9 %)     MFS permease (xxxX) {Deinococcus radiodurans}
371.1   1.1      54 % (Q: 98.5 %/S: 83.9 %)     MFS permease (xxxX) {Brucella abortus}
390.1   1.1      23 % (Q: 91.0 %/S: 90.7 %)     MFS permease (xxxX) {Rhizobium etli}
466.1   1.1      29 % (Q: 97.0 %/S: 86.2 %)     MFS permease (xxxX) {Streptomyces coelicolor A3-2}
497.1   1.1      43 % (Q: 99.4 %/S: 95.3 %)     MFS permease (xxxX) {Streptomyces coelicolor}
568.1   1.1      57 % (Q: 94.8 %/S: 93.5 %)     MFS permease (xxxX) {Escherichia coli K12}
711.1   1.1      27 % (Q: 94.5 %/S: 96.2 %)     MFS permease (xxxX) {Mycobacterium tuberculosis}
825.1   1.1      64 % (Q: 96.9 %/S: 96.0 %)     MFS permease (xxxX) {Pseudomonas aeruginosa}
857.1   1.1      59 % (Q: 97.6 %/S: 96.5 %)     MFS permease (xxxX) {Agrobacterium vitis}
872.1   1.1      51 % (Q: 94.2 %/S: 95.9 %)     MFS permease (xxxX) {Streptomyces coelicolor A3(2)}
891.1   1.1      47 % (Q: 93.9 %/S: 93.0 %)     MFS permease (xxxX) {Streptomyces coelicolor A3(2)}
974.1   2.1      52 % (Q: 97.8 %/S:104.9 %)     MFS permease (xxxX) {Neisseria meningitidis Z2491}
1516.1  1.1      36 % (Q: 95.1 %/S: 96.7 %)     MFS permease (xxxX) {Mycobacterium tuberculosis}
1544.1  3.1      32 % (Q:100.9 %/S:102.2 %)     MFS permease (xxxX) {Pseudomonas aeruginosa}
1614.1  1.1      62 % (Q: 97.5 %/S: 97.9 %)     MFS permease (xxxX) {Escherichia coli K12}
1668.1  1.1      47 % (Q: 95.6 %/S: 97.2 %)     MFS permease (xxxX) {Pseudomonas aeruginosa (strain PAO1)}
1750.1  1.1      60 % (Q: 96.3 %/S: 98.2 %)     MFS permease (xxxX) {Sphingomonas aromaticivorans}
2359.1  1.1      97 % (Q:100.2 %/S:100.0 %)     MFS permease (xxxX) {Escherichia coli K12}
2418.1  2.1      87 % (Q:100.0 %/S:100.0 %)     MFS permease (xxxX) {Pseudomonas aeruginosa}
2422.1  2.1      67 % (Q: 96.8 %/S: 97.6 %)     MFS permease (xxxX) {Streptomyces coelicolor}
2796.1  1.1      65 % (Q: 99.0 %/S: 98.3 %)     MFS permease (xxxX) {Bacillus subtilis}
3186.1  1.1      40 % (Q: 96.4 %/S: 96.7 %)     MFS permease (xxxX) {Pseudomonas putida}
3229.1  1.1      47 % (Q: 93.9 %/S: 92.8 %)     MFS permease (xxxX) {Escherichia coli K12}
3649.1  2.1      30 % (Q: 98.8 %/S: 99.5 %)     MFS permease (xxxX) {Pseudomonas aeruginosa}
4330.1  1.1      60 % (Q: 99.5 %/S: 99.3 %)     MFS permease (xxxX) {Pseudomonas aeruginosa}
4453.1  2.1      54 % (Q: 94.4 %/S: 97.6 %)     MFS permease (xxxX) {Pseudomonas aeruginosa}
2828.1  1.1      39 % (Q: 95.3 %/S: 94.9 %)     multidrug efflux protein (xxxX) {Pseudomonas aeruginosa}
3800.1  2.1      61 % (Q:100.5 %/S: 97.1 %)     multidrug efflux protein (xxxX) {Xylella fastidiosa}
3384.1  2.1      34 % (Q: 86.0 %/S: 90.2 %)     nolF secretion protein (nolF) {Sinorhizobium meliloti}
339.1   2.1      79 % (Q: 99.8 %/S: 99.8 %)     permease (xxxX) {Escherichia coli}
546.1   2.1      63 % (Q: 99.7 %/S: 98.3 %)     permease (xxxX) {Vibrio cholerae}
877.1   1.1      55 % (Q: 97.4 %/S: 87.3 %)     permease (xxxX) {Sphingomonas sp. S88}
883.1   1.1      29 % (Q:101.0 %/S: 92.1 %)     permease (xxxX) {Pyrococcus horikoshii}
949.1   1.1      38 % (Q: 99.0 %/S: 96.4 %)     permease (xxxX) {Pseudomonas aeruginosa}
1075.1  1.1      37 % (Q: 98.4 %/S: 97.8 %)     permease (xxxX) {Klebsiella pneumoniae}
1758.1  1.1      41 % (Q: 94.3 %/S: 94.3 %)     permease (xxxX) {Pseudomonas aeruginosa}
2369.1  1.1      64 % (Q: 88.3 %/S: 92.9 %)     permease (xxxX) {Xylella fastidiosa}
2606.1  1.1      71 % (Q: 92.7 %/S: 92.9 %)     permease (xxxX) {Pseudomonas aeruginosa}
3424.1  1.1      34 % (Q:100.7 %/S: 97.7 %)     permease (xxxX) {Pseudomonas aeruginosa}
2647.1  2.1      69 % (Q: 92.5 %/S: 26.8 %)     probable transmembrane transport protein (xxxX) {Bacillus subtilis}
1916.1  1.1      53 % (Q: 94.3 %/S: 98.2 %)     sodium bile acid symporter family protein (xxxX) {Neisseria meningitidis Z2491}
2648.1  2.1      59 % (Q:100.0 %/S: 66.6 %)     sodium bile acid symporter family protein (xxxX) {Pseudomonas aeruginosa}
3493.1  1.1      33 % (Q: 53.9 %/S: 36.6 %)     tolB protein (tolB) {Rickettsia prowazekii}
1223.1  2.1      57 % (Q: 78.1 %/S: 92.9 %)     transporter (xxxX) {Escherichia coli}
1710.1  2.1      52 % (Q:100.2 %/S: 99.8 %)     transporter (xxxX) {Synechocystis sp}
1756.1  1.1      60 % (Q: 99.4 %/S: 93.7 %)     transporter (xxxX) {Pseudomonas aeruginosa}
2567.1  2.1      54 % (Q: 77.1 %/S: 85.8 %)     transporter (xxxX) {Bacillus cereus}

8.11. TRANSPORT AND BINDING PROTEINS/SUBSTRATE BINDING PROTEIN (166 genes)

283.1   3.1      25 % (Q: 98.3 %/S:100.0 %)     ABC transporter, substrate binding protein (xxxX) {Rhizobium rhizogenes}
557.1   1.1      67 % (Q:100.3 %/S: 99.4 %)     ABC transporter, substrate binding protein (xxxX) {Synechocystis sp. PCC 6803}
982.1   1.1      35 % (Q: 86.3 %/S: 85.3 %)     ABC transporter, substrate binding protein (xxxX) {Streptomyces coelicolor A3(2)}
1405.1  1.1      53 % (Q: 99.4 %/S:100.3 %)     ABC transporter, substrate binding protein (xxxX) {Pseudomonas aeruginosa}
1663.1  1.1      24 % (Q: 97.7 %/S:100.9 %)     ABC transporter, substrate binding protein (xxxX) {Aspergillus parasiticus}
1853.1  2.1      29 % (Q: 66.2 %/S: 88.3 %)     ABC transporter, substrate binding protein (xxxX) {Salmonella typhimurium}
1854.1  2.1      30 % (Q: 76.9 %/S: 92.0 %)     ABC transporter, substrate binding protein (xxxX) {Lactobacillus fermentum}
1944.1  3.1      30 % (Q: 89.0 %/S: 30.1 %)     ABC transporter, substrate binding protein (xxxX) {Deinococcus radiodurans}
2338.1  3.1      40 % (Q:103.1 %/S: 96.2 %)     ABC transporter, substrate binding protein (xxxX) {Synechocystis sp}
2659.1  2.1      32 % (Q:100.6 %/S: 98.8 %)     ABC transporter, substrate binding protein (xxxX) {Brachyspira hyodysenteriae}
2668.1  2.1      23 % (Q: 68.9 %/S: 73.8 %)     ABC transporter, substrate binding protein (xxxX) {Vibrio cholerae}
2681.1  2.1      53 % (Q: 99.7 %/S: 99.0 %)     ABC transporter, substrate binding protein (xxxX) {Sinorhizobium meliloti}
2682.1  2.1      69 % (Q:100.0 %/S:101.3 %)     ABC transporter, substrate binding protein (xxxX) {Sinorhizobium meliloti}
2806.1  1.1      67 % (Q:100.0 %/S:100.0 %)     ABC transporter, substrate binding protein (xxxX) {Pseudomonas aeruginosa}
3017.1  1.1      72 % (Q: 99.4 %/S: 99.7 %)     ABC transporter, substrate binding protein (xxxX) {Sinorhizobium meliloti}
3139.1  1.1      37 % (Q: 83.9 %/S: 86.9 %)     ABC transporter, substrate binding protein (xxxX) {Neisseria gonorrhoeae}
3758.1  2.1      72 % (Q:100.0 %/S: 91.7 %)     ABC transporter, substrate binding protein (xxxX) {Bacillus subtilis}
114.1   4.1     100 % (Q:100.0 %/S:100.0 %)     ABC transporter, substrate binding protein [agrocinopine] (accA) {Agrobacterium tumefaciens}
2059.1  1.1      44 % (Q: 82.8 %/S: 98.8 %)     ABC transporter, substrate binding protein [aliphatic sulfonate] (ssuA) {Pseudomonas putida}
3364.1  2.1      79 % (Q: 99.9 %/S:100.1 %)     ABC transporter, substrate binding protein [alpha-galactoside] (agpA) {Sinorhizobium meliloti}
2270.1  1.1      74 % (Q: 94.9 %/S:100.2 %)     ABC transporter, substrate binding protein [alpha-glucoside] (aglE) {Sinorhizobium meliloti}
30.1    2.1      43 % (Q: 95.1 %/S: 95.8 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Pseudomonas aeruginosa}
261.1   3.1      38 % (Q: 95.8 %/S: 91.5 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Actinobacillus pleuropneumoniae}
281.1   3.1      33 % (Q: 86.2 %/S: 83.8 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Streptomyces coelicolor A3-2}
324.1   1.1      86 % (Q: 96.8 %/S: 94.5 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Rhizobium leguminosarum bv. viciae}
638.1   1.1      48 % (Q:100.0 %/S:100.0 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Vibrio alginolyticus}
1055.1  1.1      32 % (Q: 91.0 %/S: 88.8 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Pseudomonas aeruginosa}
1087.1  1.1      58 % (Q: 99.6 %/S: 96.2 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Pseudomonas aeruginosa}
1342.1  1.1      45 % (Q: 97.7 %/S: 94.8 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Actinobacillus pleuropneumoniae}
1353.1  1.1      40 % (Q: 99.6 %/S: 98.2 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Pseudomonas aeruginosa}
1738.1  1.1      37 % (Q: 91.2 %/S: 96.1 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Rhizobium leguminosarum bv}
2064.1  1.1      61 % (Q:101.2 %/S: 99.6 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Pseudomonas aeruginosa}
2103.1  2.1      32 % (Q: 52.1 %/S: 70.1 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Pseudomonas aeruginosa}
2300.1  3.1      32 % (Q: 95.2 %/S: 96.2 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Salmonella typhimurium}
2698.1  2.1      40 % (Q: 93.9 %/S: 96.7 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Pseudomonas aeruginosa}
2699.1  2.1      39 % (Q: 92.4 %/S: 94.8 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Leuconostoc lactis}
3105.1  2.1      37 % (Q: 93.6 %/S: 92.1 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Pseudomonas aeruginosa}
3106.1  2.1      45 % (Q: 92.7 %/S: 92.1 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Pseudomonas aeruginosa}
3350.1  2.1      67 % (Q:100.7 %/S: 98.9 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Pseudomonas aeruginosa}
3439.1  1.1      73 % (Q: 99.4 %/S:100.0 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Rhizobium leguminosarum}
3735.1  2.1      31 % (Q: 77.7 %/S: 81.8 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Archaeoglobus fulgidus}
3785.1  2.1      30 % (Q: 88.5 %/S:100.0 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Deinococcus radiodurans}
4726.1  2.1      49 % (Q: 97.2 %/S: 91.7 %)     ABC transporter, substrate binding protein [amino acid] (xxxX) {Rhizobium sp}
2711.1  2.1      29 % (Q: 89.7 %/S: 89.3 %)     ABC transporter, substrate binding protein [branched amino acid] (livJ) {Rhodopseudomonas palustris}
1367.1  1.1      43 % (Q:100.0 %/S: 91.3 %)     ABC transporter, substrate binding protein [branched chain amino acid] (xxxX) {Deinococcus radiodurans}
3206.1  1.1      45 % (Q: 97.8 %/S: 94.5 %)     ABC transporter, substrate binding protein [branched chain amino acid] (braC) {Rhizobium leguminosarum bv. viciae}
4188.1  2.1      23 % (Q: 79.9 %/S: 86.3 %)     ABC transporter, substrate binding protein [branched chain amino acid] (xxxX) {Methylophilus methylotrophus}
2865.1  3.1      56 % (Q: 98.4 %/S: 99.7 %)     ABC transporter, substrate binding protein [C4 dicarboxylate] (dctP) {Rhodobacter sphaeroides}
2514.1  2.1      29 % (Q: 74.1 %/S: 75.0 %)     ABC transporter, substrate binding protein [C4-dicarboxylate] (xxxX) {Haemophilus influenzae Rd}
3112.1  2.1      34 % (Q: 91.7 %/S: 92.5 %)     ABC transporter, substrate binding protein [C4-dicarboxylate] (xxxX) {Vibrio cholerae}
4619.1  2.1      36 % (Q: 85.9 %/S: 89.3 %)     ABC transporter, substrate binding protein [C4-dicarboxylate] {}
4666.1  2.1      34 % (Q: 84.2 %/S: 52.3 %)     ABC transporter, substrate binding protein [C4-dicarboxylate] (xxxX) {Rhizobium sp. NGR234}
209.1   2.1      28 % (Q: 98.0 %/S: 89.3 %)     ABC transporter, substrate binding protein [dipeptide] (dppA) {Bacillus firmus}
2505.1  2.1      26 % (Q:104.7 %/S:100.2 %)     ABC transporter, substrate binding protein [dipeptide] (xxxX) {Streptomyces coelicolor A3(2)}
3179.1  1.1      41 % (Q: 93.2 %/S: 88.4 %)     ABC transporter, substrate binding protein [dipeptide] (dppA) {Escherichia coli}
3919.1  3.1      46 % (Q: 97.4 %/S: 98.0 %)     ABC transporter, substrate binding protein [dipeptide] (dppA) {Escherichia coli}
4179.1  2.1      73 % (Q: 98.9 %/S: 99.1 %)     ABC transporter, substrate binding protein [dipeptide] (dppA) {Escherichia coli}
4515.1  2.1      49 % (Q: 97.8 %/S:100.8 %)     ABC transporter, substrate binding protein [dipeptide] (xxxX) {Mesorhizobium loti}
685.1   2.1      32 % (Q: 97.6 %/S: 97.6 %)     ABC transporter, substrate binding protein [ferrichrome] (fhuD) {Rhizobium leguminosarum}
926.1   2.1      46 % (Q: 98.9 %/S: 99.1 %)     ABC transporter, substrate binding protein [glycerol-3-phosphate] {}
3932.1  3.1      27 % (Q: 87.1 %/S: 79.5 %)     ABC transporter, substrate binding protein [glycerol-3-phosphate] (ugpB) {Bacillus halodurans}
444.1   1.1      47 % (Q: 97.4 %/S: 96.2 %)     ABC transporter, substrate binding protein [glycine betaine] (xxxX) {Pseudomonas aeruginosa}
4122.1  2.1      61 % (Q: 77.2 %/S: 98.8 %)     ABC transporter, substrate binding protein [glycine betaine] (xxxX) {Sinorhizobium meliloti}
1119.1  2.1      30 % (Q: 91.4 %/S: 46.4 %)     ABC transporter, substrate binding protein [glycine-betaine] (xxxX) {Streptomyces coelicolor A3(2)}
3128.1  1.1      48 % (Q: 94.9 %/S: 91.0 %)     ABC transporter, substrate binding protein [hemin] (hmuT) {Yersinia pestis}
1707.1  2.1      63 % (Q: 99.0 %/S: 97.0 %)     ABC transporter, substrate binding protein [iron] (sitA) {Salmonella typhimurium}
1829.1  2.1      24 % (Q: 97.4 %/S:103.1 %)     ABC transporter, substrate binding protein [iron] (xxxX) {Thermotoga maritima}
1830.1  2.1      27 % (Q: 95.8 %/S:100.8 %)     ABC transporter, substrate binding protein [iron] (xxxX) {Thermotoga maritima}
1835.1  2.1      28 % (Q: 95.0 %/S:100.9 %)     ABC transporter, substrate binding protein [iron] (xxxX) {Pseudomonas aeruginosa}
2746.1  1.1      47 % (Q: 98.0 %/S: 96.9 %)     ABC transporter, substrate binding protein [iron] (fbpA) {Pasteurella haemolytica}
2895.1  3.1      36 % (Q: 92.9 %/S: 88.3 %)     ABC transporter, substrate binding protein [iron] (xxxX) {Streptomyces coelicolor}
3135.1  1.1      31 % (Q: 89.3 %/S: 98.1 %)     ABC transporter, substrate binding protein [iron] (xxxX) {Xylella fastidiosa}
3594.1  1.1      52 % (Q: 94.1 %/S: 94.6 %)     ABC transporter, substrate binding protein [iron] (xxxX) {Vibrio cholerae}
4702.1  2.1      48 % (Q: 99.4 %/S: 98.8 %)     ABC transporter, substrate binding protein [iron] (afuA) {Escherichia coli}
4703.1  2.1      42 % (Q: 98.8 %/S: 97.7 %)     ABC transporter, substrate binding protein [iron] (afuA) {Actinobacillus pleuropneumoniae}
4283.1  1.1      26 % (Q:101.0 %/S:101.5 %)     ABC transporter, substrate binding protein [maltose] (malE) {Streptomyces coelicolor A3(2)}
4247.1  1.1      63 % (Q: 98.9 %/S: 98.5 %)     ABC transporter, substrate binding protein [molybdate] (modA) {Escherichia coli}
596.1   4.1      29 % (Q:102.8 %/S:100.6 %)     ABC transporter, substrate binding protein [nitrate/sulfonate] {}
218.1   4.1     100 % (Q:100.0 %/S:100.0 %)     ABC transporter, substrate binding protein [nopaline] (nocT) {Agrobacterium tumefaciens}
959.1   2.1      30 % (Q: 97.9 %/S: 94.1 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Vibrio cholerae}
1467.1  2.1      36 % (Q: 97.4 %/S: 89.0 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Helicobacter pylori (strain J99)}
1476.1  2.1      44 % (Q: 97.0 %/S: 94.5 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Pyrococcus horikoshii}
1477.1  2.1      48 % (Q: 99.6 %/S: 97.4 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Pyrococcus horikoshii}
1486.1  2.1      55 % (Q: 97.9 %/S: 96.5 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Pyrococcus horikoshii}
1847.1  2.1      80 % (Q: 95.4 %/S:100.2 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Mesorhizobium loti}
2450.1  3.1      42 % (Q: 99.6 %/S: 97.7 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Sinorhizobium meliloti}
2706.1  2.1      30 % (Q: 96.3 %/S:100.2 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Bacillus halodurans}
2851.1  3.1      30 % (Q: 93.2 %/S: 93.7 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Deinococcus radiodurans}
3078.1  2.1      74 % (Q: 99.6 %/S:100.0 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Pyrococcus horikoshii}
3394.1  2.1      35 % (Q: 98.5 %/S: 86.5 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Escherichia coli}
3761.1  2.1      83 % (Q: 95.8 %/S: 99.6 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Vibrio cholerae}
3823.1  2.1      37 % (Q: 96.9 %/S: 96.2 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Thermotoga maritima}
3981.1  2.1      48 % (Q: 89.6 %/S: 97.4 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Agrobacterium tumefaciens}
3988.1  2.1      72 % (Q:100.0 %/S: 90.7 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Escherichia coli}
4269.1  1.1      63 % (Q: 99.2 %/S: 93.7 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Thermotoga maritima}
4522.1  2.1      29 % (Q:102.4 %/S:104.2 %)     ABC transporter, substrate binding protein [oligopeptide] (xxxX) {Bacillus subtilis}
1451.1  4.1      42 % (Q: 97.6 %/S: 95.4 %)     ABC transporter, substrate binding protein [peptide] (dfpA) {Pyrococcus horikoshii}
2575.1  1.1      51 % (Q: 95.3 %/S:100.8 %)     ABC transporter, substrate binding protein [peptide] (xxxX) {Pseudomonas aeruginosa}
3609.1  1.1      64 % (Q: 97.6 %/S: 90.3 %)     ABC transporter, substrate binding protein [peptide] (xxxX) {Rhizobium sp. NGR234}
2734.1  1.1      43 % (Q: 96.2 %/S: 95.7 %)     ABC transporter, substrate binding protein [phosphate] (xxxX) {Campylobacter jejuni}
3623.1  1.1      62 % (Q:100.0 %/S:100.0 %)     ABC transporter, substrate binding protein [phosphonate] (phnD) {Sinorhizobium meliloti}
3776.1  2.1      84 % (Q: 94.3 %/S: 99.4 %)     ABC transporter, substrate binding protein [polyamine] (xxxX) {Pseudomonas aeruginosa}
343.1   2.1      75 % (Q: 99.1 %/S: 98.8 %)     ABC transporter, substrate binding protein [proline/glycine betaine] (proX) {Sinorhizobium meliloti}
3210.1  1.1      58 % (Q: 95.6 %/S: 97.1 %)     ABC transporter, substrate binding protein [proline/glycine betaine] (xxxX) {Pseudomonas aeruginosa}
3597.1  1.1      82 % (Q:100.0 %/S: 95.6 %)     ABC transporter, substrate binding protein [proline/glycine/betaine] (xxxX) {Escherichia coli K12}
655.1   3.1      23 % (Q: 94.8 %/S: 94.8 %)     ABC transporter, substrate binding protein [putrescine] (potF) {Vibrio cholerae}
2286.1  1.1      75 % (Q:100.0 %/S:100.0 %)     ABC transporter, substrate binding protein [putrescine] (potF) {Escherichia coli}
1454.1  4.1      27 % (Q: 62.1 %/S: 92.5 %)     ABC transporter, substrate binding protein [ribose] (rbsB) {Haemophilus influenzae}
1987.1  1.1      35 % (Q:105.8 %/S:100.0 %)     ABC transporter, substrate binding protein [ribose] (rbsB) {Vibrio cholerae}
2047.1  1.1      33 % (Q: 91.9 %/S: 43.6 %)     ABC transporter, substrate binding protein [ribose] (rbsB) {Streptomyces coelicolor A3(2)}
3066.1  2.1      47 % (Q: 93.7 %/S: 97.8 %)     ABC transporter, substrate binding protein [ribose] (xxxX) {Streptomyces coelicolor A3(2)}
3085.1  2.1      68 % (Q: 98.1 %/S: 98.4 %)     ABC transporter, substrate binding protein [ribose] (xxxX) {Escherichia coli}
3641.1  2.1      31 % (Q: 92.9 %/S: 44.1 %)     ABC transporter, substrate binding protein [ribose] (rbsB) {Streptomyces coelicolor}
4088.1  2.1      34 % (Q:101.7 %/S: 98.4 %)     ABC transporter, substrate binding protein [ribose] (rbsB) {Streptomyces coelicolor A3(2)}
2224.1  1.1      51 % (Q: 98.1 %/S: 97.7 %)     ABC transporter, substrate binding protein [sn-glycerol 3-phosphate] (ugpA) {Vibrio cholerae}
4563.1  2.1      59 % (Q: 98.7 %/S: 98.0 %)     ABC transporter, substrate binding protein [sn-glycerol 3-phosphate] (ugpB) {Mesorhizobium loti}
906.1   2.1      58 % (Q: 99.3 %/S: 99.5 %)     ABC transporter, substrate binding protein [sorbitol/mannitol] (xxxX) {Mesorhizobium loti}
3972.1  2.1      75 % (Q: 90.9 %/S:100.2 %)     ABC transporter, substrate binding protein [sorbitol] (xxxX) {Mesorhizobium loti}
2847.1  3.1      27 % (Q: 98.7 %/S: 89.9 %)     ABC transporter, substrate binding protein [spermidine/putrescine] (potD) {Halobacterium sp. NRC-1}
3997.1  2.1      27 % (Q: 79.1 %/S:101.9 %)     ABC transporter, substrate binding protein [spermidine/putrescine] (xxxX) {Agrobacterium rhizogenes}
4556.1  2.1      84 % (Q:100.0 %/S:100.0 %)     ABC transporter, substrate binding protein [spermidine/putrescine] (xxxX) {Mesorhizobium loti}
274.1   3.1      24 % (Q:102.9 %/S: 93.1 %)     ABC transporter, substrate binding protein [sugar] {}
915.1   2.1      55 % (Q:100.7 %/S: 98.1 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Mesorhizobium loti}
1062.1  1.1      85 % (Q: 99.7 %/S: 99.4 %)     ABC transporter, substrate binding protein [sugar] (frcB) {Sinorhizobium meliloti}
1129.1  2.1      27 % (Q: 70.2 %/S: 70.2 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Thermotoga maritima}
1135.1  2.1      60 % (Q: 92.4 %/S: 98.5 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Streptomyces coelicolor A3(2)}
1358.1  1.1      24 % (Q:104.2 %/S:100.2 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Yersinia pestis}
1813.1  2.1      72 % (Q:100.0 %/S:100.0 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Sinorhizobium meliloti}
1929.1  3.1      58 % (Q: 97.4 %/S: 99.0 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Thermococcus litoralis}
2098.1  2.1      76 % (Q:100.5 %/S:100.0 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Mesorhizobium loti}
2493.1  2.1      34 % (Q: 91.6 %/S: 90.7 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Deinococcus radiodurans}
2520.1  2.1      27 % (Q: 86.7 %/S: 89.6 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Thermotoga maritima}
2671.1  2.1      23 % (Q:102.1 %/S:102.8 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Streptomyces coelicolor A3(2)}
2757.1  1.1      39 % (Q: 97.9 %/S:100.0 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Thermotoga maritima}
3099.1  2.1      25 % (Q: 93.5 %/S: 96.0 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Bacillus subtilis}
3166.1  1.1      30 % (Q: 88.0 %/S: 92.4 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Rhizobium sp. NGR234}
3369.1  2.1      28 % (Q: 93.8 %/S: 94.0 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Bacillus halodurans}
3551.1  1.1      62 % (Q:100.5 %/S:100.0 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Rhodobacter sphaeroides}
3687.1  2.1      26 % (Q: 86.1 %/S: 86.6 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Bacillus halodurans}
3768.1  2.1      23 % (Q: 95.2 %/S: 86.6 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Bacillus halodurans}
3809.1  2.1      31 % (Q: 96.7 %/S: 99.8 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Thermotoga maritima}
3912.1  3.1      67 % (Q: 85.7 %/S: 40.5 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Thermotoga maritima}
4042.1  2.1      29 % (Q: 80.7 %/S: 74.3 %)     ABC transporter, substrate binding protein [sugar] (rbsB) {Rhizobium tropici}
4050.1  2.1      29 % (Q: 87.3 %/S: 85.4 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Streptomyces coelicolor}
4111.1  2.1      81 % (Q:100.0 %/S: 78.2 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Escherichia coli}
4569.1  2.1      50 % (Q: 96.5 %/S: 97.8 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Mesorhizobium loti}
4573.1  2.1      29 % (Q: 91.4 %/S: 94.9 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Bacillus subtilis}
4581.1  2.1      30 % (Q: 94.4 %/S: 98.3 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Bacillus subtilis}
4591.1  2.1      40 % (Q: 92.9 %/S: 91.2 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Bacillus halodurans}
4612.1  2.1      71 % (Q: 97.9 %/S: 97.9 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Mesorhizobium loti}
4655.1  2.1      36 % (Q: 89.4 %/S: 94.8 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Thermotoga maritima}
4737.1  2.1      46 % (Q: 96.0 %/S: 95.1 %)     ABC transporter, substrate binding protein [sugar] (xxxX) {Escherichia coli}
520.1   2.1      70 % (Q:100.0 %/S:100.0 %)     ABC transporter, substrate binding protein [sulfate] (xxxX) {Vibrio cholerae}
1894.1  1.1      70 % (Q: 84.3 %/S: 99.1 %)     ABC transporter, substrate binding protein [sulfate] (xxxX) {Pseudomonas aeruginosa}
862.1   1.1      65 % (Q: 98.8 %/S:100.3 %)     ABC transporter, substrate binding protein [thiamine] (thiB) {Escherichia coli K12}
2084.1  2.1      78 % (Q: 93.6 %/S:100.0 %)     ABC transporter, substrate binding protein [trehalose/maltose] (thuE) {Sinorhizobium meliloti}
86.1    1.1      81 % (Q: 99.8 %/S: 98.2 %)     ABC transporter, substrate binding protein [urea/amide] (xxxX) {Pseudomonas aeruginosa}
2553.1  2.1      75 % (Q: 98.6 %/S: 98.6 %)     ABC transporter, substrate binding protein [xylose] (xylF) {Escherichia coli K12}
1268.1  1.1      36 % (Q: 98.8 %/S: 99.1 %)     ABC transporter, substrate binding protein [zinc] (znuA) {E. coli}
3313.1  1.1      81 % (Q: 95.3 %/S:100.0 %)     bacterioferritin (bfr) {Brucella melitensis}
3291.1  1.1      88 % (Q: 99.4 %/S: 99.7 %)     C4-dicarboxylate binding protein (xxxX) {Bacillus halodurans}
4598.1  2.1      48 % (Q: 97.0 %/S: 97.9 %)     C4-dicarboxylate-binding protein (xxxX) {Bacillus halodurans}
4250.1  1.1      45 % (Q: 78.6 %/S: 91.2 %)     molybdenum-binding transcriptional repressor (modE) {Rhodobacter capsulatus}
617.1   1.1      70 % (Q:101.5 %/S:101.3 %)     mrp protein (xxxX) {Escherichia coli K12}
2114.1  2.1      65 % (Q:101.1 %/S:100.0 %)     periplasmic mannitol-binding protein (xxxX) {Mesorhizobium loti}
2862.1  3.1      23 % (Q: 73.2 %/S: 71.9 %)     sugar binding protein (xxxX) {Streptomyces coelicolor A3(2)}

8.99. TRANSPORT AND BINDING PROTEINS/OTHER (22 genes)

4092.1  2.1      79 % (Q:100.5 %/S:100.2 %)     ABC transporter, membrane spanning protein (xxxX) {Mesorhizobium loti}
4215.1  2.1      84 % (Q: 94.6 %/S: 95.3 %)     ABC transporter, membrane spanning protein [aliphatic sulphonate] (xxxX) {Pseudomonas aeruginosa}
4356.1  1.1      88 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [heme] (ccmB) {Rhizobium etli}
4357.1  1.1      71 % (Q: 99.2 %/S: 99.6 %)     ABC transporter, membrane spanning protein [heme] (ccmC) {Bradyrhizobium japonicum}
861.1   1.1      48 % (Q: 98.7 %/S: 97.4 %)     ABC transporter, membrane spanning protein [thiamine] (thiP) {Escherichia coli K12}
2070.1  2.1      41 % (Q: 99.3 %/S: 93.0 %)     ABC transporter, nucleotide binding/ATPase protein (xxxX) {Pseudomonas fluorescens}
4216.1  2.1      71 % (Q: 89.1 %/S: 92.8 %)     ABC transporter, nucleotide binding/ATPase protein [aliphatic sulfonate] (xxxX) {Pseudomonas putida}
4355.1  1.1      69 % (Q: 98.6 %/S: 97.7 %)     ABC transporter, nucleotide binding/ATPase protein [heme] (ccmA) {Rhizobium etli}
3619.1  1.1      87 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [phosphonate] (phnK) {Sinorhizobium meliloti}
3620.1  1.1      72 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein [phosphonate] (phnL) {Pseudomonas aeruginosa}
860.1   1.1      52 % (Q: 99.2 %/S: 93.3 %)     ABC transporter, nucleotide binding/ATPase protein [thiamine] (thiQ) {Vibrio cholerae}
4214.1  2.1      72 % (Q: 99.1 %/S: 99.1 %)     ABC transporter, substrate binding protein [aliphatic sulfonate] (xxxX) {Pseudomonas aeruginosa}
78.1    4.1      76 % (Q: 67.3 %/S:100.0 %)     alkylphosphonate uptake protein (phnA) {Pseudomonas aeruginosa}
2529.1  2.1      34 % (Q:101.0 %/S:101.9 %)     arsenical pump membrane protein (arsB) {Mycobacterium tuberculosis}
334.1   2.1      39 % (Q: 96.2 %/S:103.5 %)     exogenous ferric siderophore receptor (bfrA) {Bordetella bronchiseptica}
2744.1  1.1      41 % (Q: 97.6 %/S: 92.1 %)     ferrichrome iron receptor (xxxX) {Bradyrhizobium japonicum}
1786.1  1.1      71 % (Q:100.0 %/S:101.4 %)     large conductance mechanosensitive channel proteins (mscL) {Bradyrhizobium japonicum}
4240.1  1.1     100 % (Q:100.0 %/S:100.0 %)     nodulation protein T precursor (nodT) {Rhizobium leguminosarum}
2071.1  2.1      33 % (Q: 96.7 %/S: 99.3 %)     secretion protein, HlyD family (xxxX) {Mesorhizobium loti}
4430.1  2.1      74 % (Q: 99.8 %/S: 98.0 %)     tolB protein (tolB) {Rickettsia prowazekii}
4433.1  2.1      74 % (Q: 98.3 %/S: 99.6 %)     tolQ Protein (tolQ) {Pseudomonas aeruginosa}
4432.1  2.1      68 % (Q:100.0 %/S:101.3 %)     tolR protein (tolR) {Rickettsia prowazekii}

9.1. DNA METABOLISM/CHROMOSOME-ASSOCIATED PROTEINS-HISTONE-LIKE (4 genes)

3887.1  3.1      76 % (Q: 98.8 %/S: 92.4 %)     DNA binding protein (hupT) {Agrobacterium tumefaciens}
2131.1  1.1      98 % (Q:100.0 %/S:100.0 %)     DNA-binding protein (xxxX) {Rhizobium meliloti}
2165.1  1.1      63 % (Q: 99.5 %/S: 99.1 %)     DNA-binding protein (xxxX) {Streptomyces coelicolor}
143.1   4.1     100 % (Q:100.0 %/S:100.0 %)     HNS-type DNA binding protein (hupT) {Agrobacterium tumefaciens}

9.2. DNA METABOLISM/DNA REPLICATION, RECOMBINATION, AND REPAIR (93 genes)

156.1   1.1      70 % (Q: 98.1 %/S: 96.7 %)     3-methyladenine-DNA glycosylase (tag) {Streptomyces coelicolor}
1698.1  2.1      73 % (Q: 97.9 %/S: 85.8 %)     6-O-methylguanine-DNA methyltransferase (ada) {Mesorhizobium loti}
1880.1  1.1      60 % (Q: 98.4 %/S: 91.2 %)     A/G-specific adenine glycosylase (mutY) {Bacillus subtilis}
1276.1  1.1      90 % (Q:100.0 %/S:100.0 %)     ABC excinuclease subunit A (uvrA) {Rhizobium meliloti}
1949.1  1.1      46 % (Q: 98.8 %/S:100.1 %)     ATP-dependant DNA helicase (uvrD) {Bradyrhizobium japonicum}
152.1   1.1      64 % (Q:100.1 %/S:100.0 %)     ATP-dependent DNA helicase (recG) {Escherichia coli}
1060.1  1.1      50 % (Q: 98.0 %/S: 91.5 %)     ATP-dependent DNA helicase (recQ) {Xylella fastidiosa}
3401.1  2.1      81 % (Q:100.1 %/S:100.0 %)     ATP-dependent DNA helicase (uvrD) {Thermotoga maritima}
3959.1  3.1      24 % (Q: 53.7 %/S: 51.6 %)     ATP-dependent DNA helicase (xxxX) {Streptomyces coelicolor}
494.1   1.1      64 % (Q: 99.3 %/S: 99.3 %)     ATP-dependent DNA ligase (xxxX) {Thermococcus kodakaraensis}
1433.1  4.1      58 % (Q: 98.3 %/S:100.3 %)     ATP-dependent DNA ligase (xxxX) {Pseudomonas aeruginosa}
3389.1  2.1      52 % (Q:101.9 %/S: 94.8 %)     ATP-dependent DNA ligase (xxxX) {Pseudomonas aeruginosa}
3895.1  3.1      58 % (Q: 98.0 %/S: 99.1 %)     ATP-dependent DNA ligase (xxxX) {Pseudomonas aeruginosa}
3934.1  3.1      80 % (Q:100.5 %/S:100.6 %)     ATP-dependent DNA ligase (xxxX) {Pseudomonas aeruginosa}
3936.1  3.1      80 % (Q: 99.1 %/S: 98.8 %)     ATP-dependent DNA ligase (xxxX) {Pseudomonas aeruginosa}
3298.1  1.1      60 % (Q:106.3 %/S:100.9 %)     ATP-dependent helicase (mgpS) {Rhodobacter sphaeroides}
2207.1  1.1      75 % (Q: 99.8 %/S:102.4 %)     chromosomal replication initiator protein DnaA (dnaA) {Rhizobium meliloti}
1902.1  1.1      77 % (Q:100.0 %/S:100.0 %)     DNA gyrase subunit A (gyrA) {Rhodobacter sphaeroides}
1960.1  1.1      76 % (Q:101.0 %/S:100.1 %)     DNA gyrase subunit B (gyrB) {Zymomonas mobilis}
3471.1  1.1      71 % (Q:100.0 %/S:103.9 %)     DNA gyrase subunit B (gyrB) {Bartonella bacilliformis}
306.1   1.1      76 % (Q: 99.2 %/S:100.0 %)     DNA helicase II (pcrA) {Rickettsia prowazekii}
582.1   4.1      99 % (Q:100.0 %/S:100.0 %)     DNA invertase (y4CG) {Agrobacterium tumefaciens}
769.1   1.1      55 % (Q:102.1 %/S:100.7 %)     DNA ligase (xxxX) {Zymomonas mobilis}
1173.1  1.1      62 % (Q:102.8 %/S: 99.8 %)     DNA mismatch repair protein MutL (mutL) {Caulobacter crescentus}
2188.1  1.1      80 % (Q: 99.9 %/S: 96.3 %)     DNA mismatch repair protein, MutS family (mutS) {Sinorhizobium meliloti}
2161.1  1.1      56 % (Q: 99.0 %/S: 99.4 %)     DNA photolyase (xxxX) {Brevibacterium linens}
878.1   1.1      46 % (Q: 99.7 %/S:101.4 %)     DNA polymerase (xxxX) {Rickettsia prowazekii}
842.1   1.1      79 % (Q: 97.2 %/S: 98.6 %)     DNA polymerase I (polA) {Rhizobium leguminosarum}
378.1   1.1      70 % (Q: 98.8 %/S: 98.1 %)     DNA polymerase III, alpha chain (dnaE) {Xylella fastidiosa}
1430.1  4.1      81 % (Q: 99.9 %/S: 99.9 %)     DNA polymerase III, alpha chain (dnaE) {Pseudomonas aeruginosa}
3091.1  2.1      67 % (Q:100.0 %/S:100.4 %)     DNA polymerase III, alpha chain (dnaE) {Pseudomonas aeruginosa}
3893.1  3.1      82 % (Q:100.2 %/S:100.0 %)     DNA polymerase III, alpha chain (dnaE) {Pseudomonas aeruginosa}
2227.1  1.1      75 % (Q:100.0 %/S:100.0 %)     DNA polymerase III, beta chain (dnaN) {Caulobacter crescentus}
1909.1  1.1      43 % (Q:100.0 %/S: 97.7 %)     DNA polymerase III, delta prime subunit (holB) {Caulobacter vibrioides}
1966.1  1.1      59 % (Q: 97.8 %/S: 94.6 %)     DNA polymerase III, epsilon chain (dnaQ) {Vibrio cholerae}
457.1   1.1      51 % (Q: 94.1 %/S: 94.1 %)     DNA polymerase III, epsilon subunit (xxxX) {Deinococcus radiodurans}
830.1   1.1      63 % (Q: 96.5 %/S: 99.7 %)     DNA polymerase III, tau subunit (xxxX) {Caulobacter crescentus}
2824.1  1.1      56 % (Q: 98.9 %/S:100.3 %)     DNA primase (dnaG) {Rickettsia prowazekii}
396.1   1.1      78 % (Q:100.4 %/S:100.6 %)     DNA repair protein (radA) {Bacillus halodurans}
3459.1  1.1      57 % (Q: 91.8 %/S: 99.5 %)     DNA repair protein (radC) {Rhodobacter capsulatus}
768.1   1.1      66 % (Q: 99.3 %/S: 99.3 %)     DNA repair protein RecN (recN) {Neisseria meningitidis}
1669.1  1.1      60 % (Q: 94.1 %/S: 94.5 %)     DNA repair protein RecO (recO) {Bradyrhizobium japonicum}
1070.1  1.1      72 % (Q: 99.5 %/S:100.0 %)     DNA replication and repair protein (recF) {Rhizobium meliloti}
4114.1  2.1      41 % (Q: 99.1 %/S:100.6 %)     DNA topoisomerase (xxxX) {Deinococcus radiodurans}
793.1   1.1      74 % (Q: 98.1 %/S:100.2 %)     DNA topoisomerase I (topA) {Rickettsia prowazekii}
2082.1  2.1      39 % (Q: 97.4 %/S: 90.4 %)     DNA-3-methyladenine glycosylase (xxxX) {Mesorhizobium loti}
376.1   1.1      73 % (Q: 98.8 %/S: 91.3 %)     DNA-damage inducible protein P (dinP) {Neisseria meningitidis}
1921.1  3.1      70 % (Q: 97.8 %/S: 94.2 %)     DNA-damage-inducible protein (dinP) {Neisseria meningitidis}
647.1   3.1      42 % (Q: 97.1 %/S: 91.7 %)     DNA-damage-inducible protein F (dinF) {Vibrio cholerae}
526.1   1.1      84 % (Q: 93.5 %/S: 94.2 %)     dnaK deletion suppressor protein (dksA) {Caulobacter crescentus}
1413.1  1.1      40 % (Q: 90.2 %/S: 69.7 %)     dnaK suppressor protein (dskA) {Aquifex aeolicus}
1697.1  2.1      70 % (Q:100.0 %/S: 99.2 %)     endonuclease III (xxxX) {Pseudomonas aeruginosa}
2381.1  1.1      75 % (Q:100.5 %/S: 93.8 %)     excinuclease ABC chain C (uvrC) {Haemophilus influenzae}
3024.1  1.1      73 % (Q:105.0 %/S:100.9 %)     excinuclease ABC subunit B (uvrB) {Pseudomonas aeruginosa}
3304.1  1.1      62 % (Q: 99.3 %/S: 98.9 %)     exodeoxyribonuclease III (xxxX) {Rickettsia prowazekii}
3939.1  3.1      59 % (Q: 98.8 %/S: 95.9 %)     exodeoxyribonuclease III (xxxX) {Pseudomonas aeruginosa}
3004.1  1.1      80 % (Q:100.0 %/S:100.0 %)     exodeoxyribonuclease V (xxxX) {Deinococcus radiodurans}
2622.1  1.1      74 % (Q: 96.2 %/S: 96.6 %)     exonuclease III (xxxX) {Escherichia coli}
2210.1  1.1      69 % (Q:101.0 %/S:100.0 %)     formamidopyrimidine-DNA glycosylase (mutM) {Sinorhizobium meliloti}
1029.1  1.1      72 % (Q: 98.6 %/S: 99.4 %)     helicase (hrpB) {Sinorhizobium meliloti}
73.1    4.1      92 % (Q:100.0 %/S:100.0 %)     helicase, SNF2 family (xxxX) {Agrobacterium tumefaciens SAKURA}
4438.1  2.1      73 % (Q:100.5 %/S:100.0 %)     Holliday junction DNA helicase RuvA (ruvA) {Rhizobium etli}
4437.1  2.1      92 % (Q:100.0 %/S:100.0 %)     Holliday junction DNA helicase RuvB (ruvB) {Rhizobium etli}
4439.1  2.1      76 % (Q: 98.8 %/S: 99.4 %)     Holliday Junction Resolvase RuvC (ruvC) {Escherichia coli}
2194.1  1.1      87 % (Q: 93.0 %/S: 98.9 %)     integration host factor, beta subunit (ihfB) {Agrobacterium tumefaciens A6}
1349.1  1.1      76 % (Q:102.5 %/S:100.4 %)     LexA repressor (lexA) {Rhodobacter sphaeroides}
1409.1  1.1      59 % (Q: 90.7 %/S: 96.1 %)     methylated-DNA--protein-cysteine methyltransferase (ada) {Pseudomonas aeruginosa}
2160.1  1.1      44 % (Q: 89.2 %/S: 87.3 %)     methylated-DNA--protein-cysteine methyltransferase (xxxX) {Mycobacterium leprae}
1736.1  1.1      44 % (Q: 86.4 %/S: 91.4 %)     mutT like protein (xxxX) {Pseudomonas aeruginosa}
4435.1  2.1      38 % (Q: 85.1 %/S: 98.0 %)     MutT/nudix family protein (mutT) {Deinococcus radiodurans}
145.1   4.1      81 % (Q: 94.4 %/S: 96.2 %)     NTP pyrophosphohydrolase, MutT family (tiorf74) {Agrobacterium tumefaciens}
551.1   2.1      74 % (Q:100.0 %/S: 97.9 %)     NTP pyrophosphohydrolase, MutT family (xxxX) {Pseudomonas aeruginosa}
1035.1  1.1      57 % (Q: 95.7 %/S: 98.5 %)     NTP pyrophosphohydrolase, MutT family (xxxX) {Vibrio cholerae}
1101.1  1.1      43 % (Q: 92.4 %/S: 88.2 %)     NTP pyrophosphohydrolase, MutT family (xxxX) {Pseudomonas aeruginosa}
1646.1  1.1      53 % (Q: 95.6 %/S: 82.6 %)     NTP pyrophosphohydrolase, MutT family (xxxX) {Agrobacterium tumefaciens}
2373.1  1.1      45 % (Q: 88.5 %/S: 96.4 %)     NTP pyrophosphohydrolase, MutT family (xxxX) {Escherichia coli O157:H7}
4558.1  2.1      67 % (Q:100.0 %/S:100.3 %)     polymerase epsilon subunit {}
4305.1  1.1      74 % (Q: 97.2 %/S: 98.6 %)     primosomal protein N' (priA) {Escherichia coli}
1767.1  1.1     100 % (Q:100.0 %/S:100.0 %)     RecA protein (recA) {Agrobacterium tumefaciens C58}
827.1   1.1      78 % (Q: 99.0 %/S: 99.0 %)     Recombination protein (recR) {Streptomyces coelicolor}
1199.1  2.1      74 % (Q: 98.3 %/S: 98.3 %)     replication protein A (repA) {Agrobacterium rhizogenes plasmid pRiA4b}
1198.1  2.1      55 % (Q: 91.1 %/S: 98.4 %)     replication protein B (repB) {Rhizobium etli}
331.1   2.1      45 % (Q: 98.4 %/S:103.5 %)     replication protein C (repC) {Rhizobium sp. NGR234}
392.1   1.1      76 % (Q: 95.6 %/S: 97.7 %)     replicative DNA helicase (dnaC) {Bacillus stearothermophilus}
3991.1  2.1      23 % (Q: 82.0 %/S: 38.0 %)     replicative DNA helicase (xxx) {Aquifex aeolicus}
2193.1  1.1      66 % (Q: 98.7 %/S: 90.2 %)     SAM dependent methyltransferase (xxxX) {Chlamydia muridarum}
1899.1  1.1      80 % (Q:104.6 %/S:104.0 %)     single-strand DNA binding protein (ssb) {Rhizobium meliloti}
3443.1  1.1      61 % (Q: 97.7 %/S: 99.3 %)     single-stranded-DNA-specific exonuclease (recJ) {Rickettsia prowazekii}
1239.1  2.1      58 % (Q: 95.5 %/S:103.6 %)     site-specific recombinase (xerD) {Escherichia coli}
4306.1  1.1      69 % (Q: 98.4 %/S: 99.4 %)     site-specific recombinase (xerC) {Rickettsia prowazekii}
2354.1  1.1      81 % (Q:101.1 %/S:100.0 %)     topoisomerase IV subunit A (parC) {Sinorhizobium meliloti}
151.1   1.1      70 % (Q: 98.4 %/S: 96.3 %)     transcription-repair coupling factor (mfd) {Rickettsia prowazekii}
3124.1  1.1      74 % (Q: 91.6 %/S:100.0 %)     uracil-DNA glycosylase (xxxX) {Pseudomonas denitrificans}

9.3. DNA METABOLISM/DEGRADATION OF DNA (6 genes)

3969.1  3.1      87 % (Q: 54.5 %/S: 18.0 %)     DNA-invertase (invX) {Rhizobium sp.strain NGR234}
1321.1  1.1      60 % (Q: 97.7 %/S:100.0 %)     exodeoxyribonuclease small subunit (xseB) {Zymomonas mobilis}
3534.1  1.1      58 % (Q: 93.7 %/S:100.2 %)     exodeoxyribonuclease VII large subunit {}
141.1   4.1      61 % (Q: 82.7 %/S: 82.7 %)     nuclease (yci) {Agrobacterium tumefaciens}
918.1   2.1      36 % (Q: 94.9 %/S: 84.2 %)     ribonuclease H (rnhA) {Pseudomonas aeruginosa}
1864.1  1.1      79 % (Q: 98.6 %/S: 81.4 %)     ribonuclease H (xxxX) {Escherichia coli}

9.4. DNA METABOLISM/RESTRICTION-MODIFICATION (3 genes)

1877.1  1.1      99 % (Q: 98.7 %/S:100.0 %)     adenine DNA methyltransferase (xxxX) {Rhizobium meliloti}
35.1    4.1      97 % (Q:100.0 %/S:100.0 %)     antirestriction protein (ardC) {Agrobacterium tumefaciens SAKURA}
3655.1  2.1      64 % (Q:100.4 %/S: 76.4 %)     DNA methyltransferase (xxxX) {Helicobacter pylori}

10.1. TRANSCRIPTION/DEGRADATION OF RNA (3 genes)

368.1   1.1      64 % (Q: 95.4 %/S: 97.4 %)     exoribonuclease (rnr) {Brucella melitensis biovar Abortus}
1077.1  1.1      86 % (Q:100.1 %/S: 99.9 %)     polyribonucleotide nucleotidyltransferase (pnpA) {E. coli}
607.1   1.1      61 % (Q: 98.2 %/S: 92.2 %)     ribonuclease HII (rnhB) {Brucella melitensis}

10.2. TRANSCRIPTION/DNA-DEPENDENT RNA POLYMERASE (4 genes)

2026.1  1.1     100 % (Q:100.0 %/S:100.0 %)     DNA-directed RNA polymerase alpha subunit (rpoA) {Agrobacterium tumefaciens}
3054.1  1.1      86 % (Q:100.1 %/S:100.1 %)     DNA-directed RNA polymerase beta chain (rpoB) {Bartonella henselae}
1997.1  1.1      87 % (Q: 99.5 %/S: 99.8 %)     DNA-directed RNA polymerase beta' chain {}
1677.1  1.1      78 % (Q:103.1 %/S:100.0 %)     DNA-directed RNA polymerase omega subunit (rnpO) {Bradyrhizobium japonicum}

10.3. TRANSCRIPTION/RNA PROCESSING (11 genes)

850.1   1.1      53 % (Q: 92.7 %/S: 83.4 %)     16S rRNA processing protein (rimM) {Xylella fastidiosa}
3254.1  1.1      48 % (Q: 92.2 %/S:101.8 %)     dead-box ATP-dependent RNA helicase (rhlE) {Escherichia coli}
1036.1  1.1      58 % (Q: 99.5 %/S: 99.0 %)     poly(A) polymerase (papS) {Caenorhabditis elegans}
2377.1  1.1      37 % (Q: 65.9 %/S: 77.2 %)     ribonuclease (rns) {Aeromonas hydrophila}
2360.1  1.1      99 % (Q:100.0 %/S:100.0 %)     ribonuclease D (rnd) {Pseudomonas aeruginosa}
4175.1  2.1      70 % (Q: 99.5 %/S:100.5 %)     ribonuclease D (rnd) {Rickettsia prowazekii}
122.1   1.1      56 % (Q:105.8 %/S:105.1 %)     ribonuclease E (rne) {Rickettsia prowazekii}
1673.1  1.1      61 % (Q: 89.5 %/S: 96.8 %)     ribonuclease III (rnc) {Bradyrhizobium japonicum}
2764.1  1.1      60 % (Q: 85.0 %/S: 98.2 %)     ribonuclease P protein component (rnpA) {Helicobacter pylori}
2204.1  1.1      78 % (Q:100.0 %/S:100.0 %)     ribonuclease PH (rph) {Rickettsia prowazekii}
1080.1  1.1      62 % (Q: 96.4 %/S: 91.1 %)     ribosome-binding factor A (rbfA) {Rickettsia prowazekii}

10.4. TRANSCRIPTION/TRANSCRIPTION FACTORS (7 genes)

823.1   1.1      83 % (Q: 98.1 %/S: 99.4 %)     N-utilization substance protein A (nusA) {Pseudomonas aeruginosa}
135.1   1.1      68 % (Q: 90.9 %/S: 96.8 %)     N-utilization substance protein B (nusB) {Zymomonas mobilis}
780.1   1.1      31 % (Q:102.1 %/S:105.5 %)     transcription antitermination protein (nusG) {Treponema pallidum}
3049.1  1.1      84 % (Q: 98.3 %/S: 99.4 %)     transcription antitermination protein NusG (nusG) {EDTA-degrading bacterium BNC1}
2835.1  1.1      92 % (Q:100.0 %/S:100.0 %)     transcription elongation facto (greA) {Sinorhizobium meliloti}
2541.1  2.1      70 % (Q: 93.0 %/S:100.0 %)     transcription elongation factor (greB) {Haemophilus influenzae (strain Rd KW20)}
1973.1  1.1      93 % (Q: 99.3 %/S:100.0 %)     transcription termination factor Rho (rho) {Rhodobacter sphaeroides}

10.5. TRANSCRIPTION/SIGMA FACTORS (16 genes)

60.1    1.1      32 % (Q: 97.8 %/S: 98.9 %)     ECF family sigma factor (xxxX) {Streptomyces coelicolor}
1499.1  1.1      47 % (Q: 92.9 %/S: 90.7 %)     ECF family sigma factor (prtI) {Rhizobium leguminosarum bv. viciae}
2304.1  3.1      43 % (Q: 80.0 %/S: 78.7 %)     ECF family sigma factor (ecfR) {Rhizobium leguminosarum bv. viciae}
2877.1  3.1      44 % (Q: 91.7 %/S: 59.5 %)     ECF family sigma factor (xxxX) {Myxococcus xanthus}
2892.1  3.1      37 % (Q: 96.4 %/S: 90.1 %)     ECF family sigma factor (xxxx) {Pseudomonas aeruginosa}
3000.1  1.1      38 % (Q: 93.8 %/S: 81.5 %)     ECF family sigma factor (xxxx) {Mycobacterium smegmatis}
3201.1  1.1      50 % (Q: 97.7 %/S: 93.3 %)     ECF family sigma factor (SigD) {Mycobacterium tuberculosis}
4219.1  2.1      69 % (Q: 96.3 %/S: 98.4 %)     ECF family sigma factor (xxxX) {Myxococcus xanthus}
4552.1  2.1      63 % (Q:102.2 %/S:101.1 %)     ECF family sigma factor (sigW) {Mesorhizobium loti}
2823.1  1.1      98 % (Q:100.0 %/S:100.0 %)     RNA polymerase sigma factor RpoD (rpoD) {Agrobacterium tumefaciens}
98.1    1.1      99 % (Q:100.0 %/S:100.0 %)     RNA polymerase sigma-32 factor (rp32) {Agrobacterium tumefaciens}
2199.1  1.1      66 % (Q:102.0 %/S: 96.9 %)     RNA polymerase sigma-54 factor (rpoN) {Rhizobium leguminosarum}
1826.1  2.1      33 % (Q: 94.0 %/S: 88.6 %)     sigma factor (pfrI) {Pseudomonas putida}
3037.1  1.1      53 % (Q:100.0 %/S:100.6 %)     sigma factor (sigK) {Mycobacterium tuberculosis}
4411.1  2.1      33 % (Q: 88.3 %/S:100.0 %)     sigma factor (xxxX) {Pseudomonas putida}
2200.1  1.1      78 % (Q:100.0 %/S:100.0 %)     sigma-54 modulation protein (xxxX) {Rhizobium meliloti}

11.1. TRANSLATION/AMINO ACYL TRNA SYNTHETASES (28 genes)

1766.1  1.1      80 % (Q: 99.9 %/S: 99.9 %)     alanyl-tRNA synthetase (alaS) {Rhizobium meliloti}
2163.1  1.1      66 % (Q: 98.4 %/S: 97.2 %)     alanyl-tRNA synthetase (alaS) {Pseudomonas aeruginosa}
2625.1  1.1      72 % (Q:100.0 %/S:100.0 %)     arginyl-tRNA synthetase (argS) {Zymomonas mobilis}
2358.1  1.1      79 % (Q:100.0 %/S: 99.8 %)     aspartyl-tRNA synthetase (xxxX) {Streptomyces coelicolor}
231.1   1.1      69 % (Q:102.6 %/S: 99.2 %)     cysteinyl-tRNA synthetase (cysS) {Rickettsia prowazekii}
805.1   1.1      76 % (Q:105.7 %/S:100.0 %)     glutamyl-tRNA amidotransferase subunit A (gatA) {Rickettsia prowazekii}
3103.1  2.1      38 % (Q: 91.2 %/S: 95.8 %)     glutamyl-tRNA amidotransferase subunit A (gatA) {Sphingomonas sp}
3978.1  2.1      59 % (Q: 99.4 %/S: 99.6 %)     glutamyl-tRNA amidotransferase subunit A (gatA) {Pseudomonas aeruginosa}
809.1   1.1      83 % (Q: 99.6 %/S:100.0 %)     glutamyl-tRNA amidotransferase subunit B (gatB) {Pseudomonas aeruginosa}
1709.1  2.1      79 % (Q: 99.8 %/S: 99.8 %)     glutamyl-tRNA synthetase (gltX) {Rhizobium meliloti}
2566.1  2.1      57 % (Q: 95.7 %/S: 98.3 %)     glutamyl-tRNA Synthetase (gltX) {Aquifex aeolicus}
804.1   1.1      81 % (Q:100.0 %/S: 72.6 %)     glutamyl-tRNA-Gln-amidotransferase chain C (gatC) {Bacillus subtilis}
1628.1  1.1      86 % (Q: 98.1 %/S: 96.8 %)     glycyl-tRNA synthetase, alpha subunit (glyQ) {Pseudomonas aeruginosa}
1632.1  1.1      72 % (Q:101.8 %/S:101.7 %)     glycyl-tRNA synthetase, beta chain (glyS) {Neisseria meningitidis}
1192.1  1.1      59 % (Q: 97.1 %/S: 97.6 %)     histidyl-tRNA synthetase (hisS) {Methanobacterium thermoautotrophicum}
1194.1  1.1      68 % (Q: 99.0 %/S:100.4 %)     histidyl-tRNA synthetase (hisS) {Aeropyrum pernix}
2511.1  2.1      62 % (Q: 88.8 %/S:101.8 %)     L-seryl-tRNA(ser) selenium transferase (selA) {Thermoplasma acidophilum}
3295.1  1.1      72 % (Q:100.0 %/S:100.1 %)     leucyl-tRNA synthetase (leuS) {Rickettsia prowazekii}
1708.1  2.1      79 % (Q:100.0 %/S:100.2 %)     lysyl-tRNA synthetase (lysS) {Sinorhizobium meliloti}
4242.1  1.1     100 % (Q:100.0 %/S:100.0 %)     lysyl-tRNA synthetase (poxA) {Haemophilus influenzae}
1911.1  1.1      67 % (Q: 98.1 %/S: 98.1 %)     methionyl-tRNA synthetase (metS) {Mycobacterium tuberculosis}
3542.1  1.1      74 % (Q:100.0 %/S:100.6 %)     phenylalanyl-tRNA synthetase beta chain (pheT) {Rickettsia prowazekii}
3543.1  1.1      82 % (Q:100.0 %/S: 97.0 %)     phenylalanyl-tRNA synthetase, alpha-subunit (pheS) {Rickettsia prowazekii}
381.1   1.1      73 % (Q: 99.3 %/S: 98.9 %)     prolyl-tRNA synthetase (proS) {Zymomonas mobilis}
2633.1  1.1      70 % (Q:101.2 %/S: 99.5 %)     seryl-tRNA synthetase (serS) {Rickettsia prowazekii}
2600.1  1.1      76 % (Q: 99.6 %/S:100.9 %)     threonyl-tRNA synthetase (thrS) {Rickettsia prowazekii}
1730.1  1.1      72 % (Q:100.0 %/S:100.0 %)     tyrosyl-tRNA synthetase (tyrS) {Pseudomonas aeruginosa}
2618.1  1.1      73 % (Q:100.0 %/S:102.2 %)     valyl-tRNA synthetase (valS) {Vibrio cholerae}

11.2. TRANSLATION/DEGRADATION OF PROTEINS, PEPTIDES, AND GLYCOPEPTIDES (54 genes)

256.1   3.1      65 % (Q: 93.2 %/S: 95.5 %)     aminopeptidase (xxxX) {Ochrobactrum anthropi}
3529.1  1.1      75 % (Q: 98.1 %/S:100.0 %)     aminopeptidase (ampS) {Thermus thermophilus}
876.1   1.1      58 % (Q: 99.8 %/S: 99.9 %)     aminopeptidase N (pepN) {Pseudomonas aeruginosa}
452.1   1.1      55 % (Q: 96.9 %/S: 99.5 %)     aminopeptidase P (xxxX) {Vibrio cholerae}
2353.1  1.1      70 % (Q: 98.4 %/S: 97.6 %)     arginine-tRNA-protein transferase (xxxX) {Xylella fastidiosa}
743.1   1.1      78 % (Q: 99.9 %/S:101.6 %)     ATP-dependent Clp protease, ATP-binding subunit (clpA) {Brucella suis}
2133.1  1.1      88 % (Q:100.0 %/S:100.5 %)     ATP-dependent Clp protease, ATP-binding subunit (clpX) {Brucella abortus}
4065.1  2.1      43 % (Q:100.4 %/S: 99.3 %)     ATP-dependent Clp protease, ATP-binding subunit (clpB) {Campylobacter jejuni}
4233.1  2.1      81 % (Q: 98.5 %/S: 99.2 %)     ATP-dependent Clp protease, ATP-binding subunit (clpB) {Deinococcus radiodurans}
2134.1  1.1      84 % (Q: 99.5 %/S:100.0 %)     ATP-dependent Clp protease, proteolytic subunit (clpP) {Brucella abortus}
3202.1  1.1      81 % (Q: 81.7 %/S: 98.5 %)     ATP-dependent Clp protease, proteolytic subunit (clpP) {Rhizobium meliloti}
3476.1  1.1      70 % (Q: 96.5 %/S: 97.0 %)     ATP-dependent Clp protease, proteolytic subunit (clpP) {Caulobacter crescentus}
2132.1  1.1      87 % (Q:100.1 %/S:100.0 %)     ATP-dependent protease LA (lon) {Sinorhizobium meliloti}
4415.1  2.1      60 % (Q: 98.1 %/S: 94.2 %)     ATP-dependent protease LA 2 (lonD) {Myxococcus xanthus}
1266.1  1.1      33 % (Q: 96.4 %/S: 89.5 %)     beta-mannosidase precursor (manA) {Xylella fastidiosa}
3316.1  1.1      74 % (Q:100.5 %/S:100.2 %)     carboxy-terminal protease (ctpA) {Bartonella bacilliformis}
2396.1  1.1      64 % (Q:101.0 %/S: 99.8 %)     cytosol aminopeptidase (pepA) {Rickettsia prowazekii}
3180.1  1.1      55 % (Q:102.3 %/S:100.6 %)     dipeptidase (xxxX) {Acinetobacter calcoaceticus}
3989.1  2.1      51 % (Q: 92.5 %/S: 98.6 %)     dipeptidase (xxxX) {Acinetobacter calcoaceticus}
3853.1  3.1     100 % (Q:100.0 %/S:100.0 %)     dipeptidyl peptidase IV (attS) {Agrobacterium tumefaciens}
1524.1  1.1      61 % (Q: 96.2 %/S: 99.1 %)     GTP-binding protein HFLX (hflx) {E. coli}
2987.1  1.1      68 % (Q:100.3 %/S: 96.6 %)     HFLC protein (hflC) {E. coli}
2986.1  1.1      63 % (Q:101.3 %/S:101.6 %)     HFLK protein (hflK) {Escherichia coli}
3582.1  1.1      57 % (Q: 96.6 %/S: 91.2 %)     leucine aminopeptidase (xxxX) {Xylella fastidiosa}
1734.1  1.1      48 % (Q:102.3 %/S:101.8 %)     membrane protein associated metalloendopeptidase (xxxX) {Shewanella violacea}
4426.1  2.1      81 % (Q:100.0 %/S:100.9 %)     metalloprotease (ftsH) {Bradyrhizobium japonicum}
3230.1  1.1      44 % (Q:101.6 %/S:100.8 %)     methionin aminopeptidase (map) {Staphylococcus aureus}
1099.1  1.1      67 % (Q:100.0 %/S: 98.3 %)     N-carbamoyl-beta-alanine amidohydrolase (amaB) {Pseudomonas aeruginosa}
4541.1  2.1      61 % (Q: 97.8 %/S: 97.6 %)     N-carbamoyl-beta-alanine amidohydrolase (amaB) {Mesorhizobium loti}
3732.1  2.1      86 % (Q:100.0 %/S: 95.0 %)     NonF-related protein (xxx) {Xylella fastidiosa}
4325.1  1.1      70 % (Q: 99.2 %/S:100.0 %)     O-sialoglycoprotein endopeptidase (gcp) {Rickettsia prowazekii}
4472.1  2.1      72 % (Q: 96.1 %/S: 96.7 %)     oligoendopeptidase F (pepF) {Helicobacter pylori 26695}
1591.1  3.1      27 % (Q:100.8 %/S: 86.6 %)     peptidase (xxxX) {Caenorhabditis elegans}
2295.1  3.1      35 % (Q: 98.2 %/S:101.1 %)     peptidase (xxxX) {Bacillus halodurans}
1871.1  1.1      65 % (Q: 98.1 %/S: 97.7 %)     peptidase, family M16 (xxxX) {Bradyrhizobium japonicum}
4335.1  1.1      64 % (Q: 98.7 %/S: 99.0 %)     peptidyl-dipeptidase (dcp) {Xylella fastidiosa}
660.1   3.1      23 % (Q: 64.1 %/S: 77.7 %)     proline dipeptidase (pepQ) {Lactobacillus pentosus}
4178.1  2.1      50 % (Q: 96.7 %/S: 94.3 %)     proline dipeptidase (xxxX) {Pseudomonas aeruginosa}
4607.1  2.1      37 % (Q: 88.8 %/S:100.6 %)     proline dipeptidase (xxxX) {Mesorhizobium loti}
227.1   1.1      75 % (Q:100.0 %/S:100.0 %)     proline iminopeptidase (pip) {Serratia marcescens}
4018.1  2.1      87 % (Q:100.0 %/S:100.0 %)     protease (XXXX) {Pseudomonas aeruginosa}
1979.1  1.1      69 % (Q:101.6 %/S: 97.0 %)     protease heat shock protein (htpx) {Pyrococcus abyssi}
1406.1  1.1      65 % (Q: 98.1 %/S: 97.0 %)     protease II (ptrB) {Pseudomonas sp.}
2372.1  1.1      29 % (Q:101.6 %/S: 39.8 %)     protease VII precursor (xxxX) {Escherichia coli}
4205.1  2.1      47 % (Q: 97.8 %/S: 95.8 %)     proteinase (pfpI) {Streptomyces coelicolor}
2195.1  1.1      52 % (Q: 99.4 %/S: 99.1 %)     proteinase IV (sppA) {Rickettsia prowazekii}
1627.1  1.1      63 % (Q: 97.9 %/S: 98.6 %)     proteinase sohB (sohB) {Rickettsia prowazekii}
2034.1  1.1      55 % (Q: 99.6 %/S: 98.3 %)     serine protease (htrA) {Brucella abortus}
2670.1  2.1      33 % (Q: 47.1 %/S: 13.4 %)     serine protease (xxxX) {Xylella fastidiosa}
2988.1  1.1      58 % (Q:100.0 %/S:102.0 %)     serine protease DO-like precursor (htrA) {Brucella abortus}
480.1   1.1      69 % (Q: 96.6 %/S:100.2 %)     serine protease DO-like protease (dop) {Rhizobium meliloti}
936.1   1.1      69 % (Q: 99.5 %/S: 99.5 %)     Xaa-Pro dipeptidase (pepQ) {Bacillus halodurans}
4724.1  2.1      82 % (Q: 99.7 %/S: 96.3 %)     Xaa-Pro dipeptidase (pepQ) {Bacillus halodurans}
727.1   1.1      51 % (Q: 91.0 %/S: 99.1 %)     zinc metallopeptidase (xxxX) {Rickettsia prowazekii}

11.4. TRANSLATION/PROTEIN MODIFICATION (14 genes)

2635.1  1.1      54 % (Q: 95.8 %/S:100.0 %)     L-isoaspartyl protein carboxyl methyltransferase (pcm) {Rhizobium melilot}
3458.1  1.1      85 % (Q: 98.6 %/S: 99.6 %)     methionine aminopeptidase (map) {Zymomonas mobilis}
2598.1  1.1      61 % (Q: 99.3 %/S: 99.3 %)     NIFU-like protein (nifU) {Thermotoga maritima}
312.1   1.1      65 % (Q: 99.5 %/S: 98.6 %)     peptide methionine sulfoxide reductase (msrA) {Synechocystis sp. strain PCC6803}
410.1   1.1      70 % (Q: 84.7 %/S: 97.6 %)     peptidyl prolyl cis-trans isomerase (ppiB) {Zymomonas mobilis}
411.1   1.1      75 % (Q: 98.8 %/S: 98.2 %)     peptidyl prolyl cis-trans isomerase (ppiB) {Zymomonas mobilis}
548.1   2.1      51 % (Q: 86.0 %/S: 85.1 %)     peptidyl-prolyl cis-trans isomerase (ppiD) {Campylobacter jejuni}
408.1   1.1      49 % (Q: 99.8 %/S: 99.8 %)     peptidyl-prolyl cis-trans isomerse D (ppiD) {Rhodobacter sphaeroides}
1244.1  1.1      41 % (Q:103.7 %/S: 98.3 %)     polypeptide deformylase (def) {Pseudomonas aeruginosa}
2780.1  1.1      74 % (Q: 99.4 %/S: 96.0 %)     polypeptide deformylase (def) {Zymomonas mobilis}
939.1   1.1      61 % (Q: 95.7 %/S: 93.7 %)     prolipoprotein diacylglyceryl transferase (lgt) {Pseudomonas aeruginosa}
2616.1  1.1      56 % (Q: 99.1 %/S: 99.5 %)     protein-L-isoaspartate O-methyltransferase (pcm) {Neisseria meningitidis Z2491}
1214.1  2.1      50 % (Q: 93.7 %/S:100.0 %)     thiol:disulfide interchange protein (dsbE) {Bradyrhizobium japonicum}
4358.1  1.1      69 % (Q: 92.0 %/S: 98.4 %)     thiol:disulfide interchange protein (ccmG) {Rhizobium leguminosarum}

11.5. TRANSLATION/RIBOSOMAL PROTEINS: SYNTHESIS AND MODIFICATION (66 genes)

4172.1  2.1      93 % (Q: 99.6 %/S: 99.3 %)     30S ribosomal protein S1 (rpsA) {Rhizobium melilotii 2011}
2003.1  1.1      95 % (Q:100.0 %/S:100.0 %)     30S ribosomal protein S10 (rpsJ) {Buchnera aphidicola}
2025.1  1.1      93 % (Q:100.0 %/S:100.0 %)     30S ribosomal protein S11 (rpsK) {Bacillus subtilis}
1999.1  1.1      96 % (Q:100.0 %/S:100.0 %)     30S ribosomal protein S12 (rpsL) {Neisseria meningitidis}
2024.1  1.1      91 % (Q:100.0 %/S:100.0 %)     30S ribosomal protein S13 (rpsM) {Thermus thermophilus}
2016.1  1.1      73 % (Q:100.0 %/S:100.0 %)     30S ribosomal protein S14 (rpsN) {Rickettsia prowazekii}
1078.1  1.1      77 % (Q:100.0 %/S:100.0 %)     30S ribosomal protein S15 (rpsO) {Escherichia coli}
849.1   1.1      70 % (Q: 98.4 %/S: 93.2 %)     30S ribosomal protein S16 (rpsP) {Rickettsia prowazekii}
2012.1  1.1      77 % (Q: 97.4 %/S: 96.2 %)     30S ribosomal protein S17 (rpsQ) {Thermotoga maritima}
386.1   1.1      90 % (Q: 98.8 %/S: 98.8 %)     30S ribosomal protein S18 (rpsR) {Rhodobacter capsulatus (Rhodopseudomonas capsulata)}
2008.1  1.1      88 % (Q:100.0 %/S:100.0 %)     30S ribosomal protein S19 (rpsS) {Rickettsia prowazekii}
733.1   1.1      82 % (Q: 98.0 %/S: 96.2 %)     30S ribosomal protein S2 (rpsB) {Zymomonas mobilis}
2208.1  1.1      82 % (Q:100.0 %/S:100.0 %)     30S ribosomal protein S20 (rpsT) {Rhizobium meliloti (Sinorhizobium meliloti)}
4139.1  2.1      92 % (Q: 90.7 %/S: 77.3 %)     30S ribosomal protein S21 (rpsU) {Rhizobium meliloti (Sinorhizobium meliloti)}
4370.1  2.1      75 % (Q: 97.4 %/S: 94.9 %)     30S ribosomal protein S21 (rpsU) {Rhizobium meliloti}
4587.1  2.1      78 % (Q:100.0 %/S:100.0 %)     30S ribosomal protein S21 (rpsU) {Rhizobium meliloti (Sinorhizobium meliloti)}
2010.1  1.1      85 % (Q:100.8 %/S:101.7 %)     30S ribosomal protein S3 (rpsC) {Escherichia coli}
1755.1  1.1      82 % (Q:100.0 %/S:100.0 %)     30S ribosomal protein S4 (rpsD) {Zymomonas mobilis}
2020.1  1.1      82 % (Q: 99.5 %/S: 95.4 %)     30s ribosomal protein S5 (rpsE) {Rickettsia prowazekii}
385.1   1.1      67 % (Q:103.9 %/S: 95.8 %)     30S ribosomal protein S6 (rpsF) {Rhodobacter capsulatus (Rhodopseudomonas capsulata)}
2000.1  1.1      89 % (Q:100.0 %/S:100.0 %)     30S ribosomal protein S7 (rpsG) {Haemophilus influenzae}
2017.1  1.1      77 % (Q:100.0 %/S:100.0 %)     30S ribosomal protein S8 (rpsH) {Pseudomonas aeruginosa}
2145.1  1.1      75 % (Q:103.2 %/S:100.0 %)     30S ribosomal protein S9 (rpsI) {Rickettsia prowazekii}
3051.1  1.1      80 % (Q:100.0 %/S: 99.6 %)     50S ribosomal protein L1 (rplA) {EDTA-degrading bacterium BNC1}
3052.1  1.1      74 % (Q:100.0 %/S:100.0 %)     50S ribosomal Protein L10 (rplJ) {Brucella abortus}
3050.1  1.1      76 % (Q:100.0 %/S:100.7 %)     50S Ribosomal Protein L11 (rplK) {EDTA-degrading bacterium BNC1}
2144.1  1.1      81 % (Q:100.0 %/S:100.0 %)     50S ribosomal protein L13 (rplM) {Rickettsia prowazekii}
2013.1  1.1      97 % (Q:100.0 %/S:100.0 %)     50S ribosomal protein L14 (rplN) {Neisseria meningitidis}
2021.1  1.1      76 % (Q: 94.3 %/S: 95.5 %)     50S ribosomal protein L15 (rplO) {Bacillus halodurans}
2011.1  1.1      83 % (Q:100.0 %/S:100.0 %)     50S ribosomal protein L16 (rplP) {Synechocystis sp}
2027.1  1.1      70 % (Q:100.0 %/S: 98.6 %)     50S ribosomal protein L17 (rplQ) {Neisseria meningitidis}
2019.1  1.1      73 % (Q: 96.7 %/S: 97.5 %)     50S ribosomal protein L18 (rplR) {Anacystis nidulans}
853.1   1.1      81 % (Q: 98.9 %/S: 97.8 %)     50S ribosomal protein L19 (rplS) {Bacillus stearothermophilus}
2007.1  1.1      80 % (Q: 99.6 %/S:100.0 %)     50S ribosomal protein L2 (rplB) {Rickettsia prowazekii}
3545.1  1.1      79 % (Q: 99.3 %/S:100.0 %)     50S ribosomal protein L20 (rplT) {Pseudomonas syringae (pv . syringae)}
3327.1  1.1      64 % (Q: 98.1 %/S: 45.7 %)     50S ribosomal protein L21 (rplU) {Vibrio cholerae}
2009.1  1.1      86 % (Q:100.0 %/S:100.0 %)     50S ribosomal protein L22 (rplV) {Rickettsia prowazekii}
2006.1  1.1      83 % (Q:100.0 %/S:100.0 %)     50S ribosomal protein L23 (rplW) {Neisseria meningitidis}
2014.1  1.1      73 % (Q:102.0 %/S:100.0 %)     50S ribosomal protein L24 (rplX) {Bacillus subtilis}
1057.1  1.1      66 % (Q:101.5 %/S: 96.2 %)     50S ribosomal protein L25 (rplY) {Rickettsia prowazekii}
3326.1  1.1      78 % (Q:100.0 %/S:100.0 %)     50S ribosomal protein L27 (rpmA) {Vibrio cholerae}
1230.1  2.1      78 % (Q: 97.9 %/S: 95.9 %)     50S ribosomal protein L28 (rpmB) {Zymomonas mobilis}
5134.1  1.1      68 % (Q:100.0 %/S:100.0 %)     50S ribosomal protein L29 {}
2004.1  1.1      75 % (Q: 99.1 %/S: 89.0 %)     50S ribosomal protein L3 (rplC) {Rickettsia prowazekii}
6137.1  2.1      76 % (Q:100.0 %/S:100.0 %)     50S ribosomal protein L31 {}
843.1   1.1      93 % (Q: 63.8 %/S:100.0 %)     50S ribosomal protein L32 (rpmF) {Rickettsia prowazekii}
372.1   1.1      80 % (Q:100.0 %/S:100.0 %)     50S ribosomal protein L33 (rpmG) {Haemophilus influenzae Rd}
3546.1  1.1      88 % (Q:100.0 %/S:100.0 %)     50S ribosomal protein L35 (rpmI) {Rickettsia prowazekii}
2005.1  1.1      80 % (Q:100.0 %/S:100.0 %)     50S ribosomal protein L4 (rplD) {Bacillus stearothermophilus}
2015.1  1.1      81 % (Q: 96.2 %/S: 92.2 %)     50S ribosomal protein L5 (rplE) {Bacillus halodurans}
2018.1  1.1      77 % (Q:100.0 %/S:100.0 %)     50S ribosomal protein L6 (rplF) {Mycobacterium tuberculosis}
3053.1  1.1      85 % (Q:100.0 %/S:100.0 %)     50S ribosomal protein L7/L12 (rplL) {Brucella melitensis biovar Abortus}
1735.1  1.1      65 % (Q:102.2 %/S: 97.5 %)     ATP-dependent RNA helicase (rhlE) {Vibrio cholerae}
388.1   1.1      87 % (Q:100.0 %/S: 99.5 %)     cultivar specific nodulation protein (csn1) {Rhizobium leguminosarum bv. trifolii}
4117.1  2.1      50 % (Q: 96.4 %/S: 97.7 %)     ribosomal large subunit pseudouridine synthase A (rluA) {Escherichia coli}
1182.1  1.1      48 % (Q: 81.2 %/S: 99.5 %)     ribosomal large subunit pseudouridine synthase B (rluB) {Rickettsia prowazeki}
1510.1  1.1      69 % (Q: 99.1 %/S:100.0 %)     ribosomal large subunit pseudouridine synthase C (rluC) {Bartonella bacilliformis}
453.1   1.1      62 % (Q: 95.0 %/S: 79.0 %)     ribosomal protein L11 methyltransferase (prmA) {Deinococcus radiodurans}
1076.1  1.1      51 % (Q:100.6 %/S:101.2 %)     ribosomal RNA small subunit methyltransferase (rsmC) {Escherichia coli}
1870.1  1.1      52 % (Q: 94.5 %/S: 94.9 %)     ribosomal-protein (S5)-alanine N-acetyltransferase (rimJ) {Bradyrhizobium japonicum}
102.1   1.1      55 % (Q: 93.0 %/S: 99.6 %)     RNA methylase (xxxX) {Streptomyces coelicolor A3(2)}
2192.1  1.1      66 % (Q: 95.7 %/S: 98.5 %)     rRNA methylase (trmH) {Bacillus halodurans}
2402.1  1.1      75 % (Q:100.0 %/S: 98.9 %)     rRNA-adenine N6,N6-dimethyltransferase (ksgA) {Pseudomonas aeruginosa}
1980.1  1.1      54 % (Q: 97.0 %/S: 96.8 %)     Sun protein (sun) {Deinococcus radiodurans}
5511.1  1.1      54 % (Q: 99.5 %/S: 99.5 %)     Sun protein {}
1040.1  1.1      70 % (Q: 90.7 %/S: 91.8 %)     tRNA/rRNA methyltransferase (xxxX) {Brucella melitensis biovar Abortus}

11.6. TRANSLATION/TRNA MODIFICATION (19 genes)

4348.1  1.1      69 % (Q: 95.9 %/S: 95.5 %)     2'-5' RNA ligase (ligT) {Aeropyrum pernix}
1185.1  1.1      74 % (Q:102.5 %/S: 98.8 %)     isoleucyl-tRNA synthetase (ileS) {Zymomonas mobilis}
813.1   1.1      64 % (Q: 95.1 %/S: 94.6 %)     leucyl/phenylalanyl-tRNA-protein transferase (aat) {Pseudomonas aeruginosa}
2779.1  1.1      63 % (Q: 99.7 %/S: 97.8 %)     methionyl-tRNA formyl transferase (fmt) {Zymomonas mobilis}
2177.1  1.1      73 % (Q: 97.8 %/S: 98.9 %)     miaB protein (miaB) {Rickettsia prowazekii}
1054.1  1.1      63 % (Q:100.8 %/S:100.0 %)     peptidyl tRNA hydrolase (pth) {Bacillus halodurans}
101.1   1.1      82 % (Q: 80.3 %/S: 98.9 %)     pseudouridine synthase homolog (rluD) {Sinorhizobium meliloti}
3509.1  1.1      77 % (Q: 99.2 %/S: 99.2 %)     queuine tRNA-ribosyltransferase (tgt) {Zymomonas mobilis}
1311.1  1.1      51 % (Q: 98.6 %/S: 99.5 %)     RNA methyltransferase (xxxX) {Zymomonas mobilis}
3510.1  1.1      70 % (Q: 99.5 %/S:100.8 %)     S-adenosylmethionine tRNA ribosyltransferase (queA) {Zymomonas mobilis}
4419.1  2.1      75 % (Q: 99.2 %/S: 99.7 %)     tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (trmU) {Rickettsia prowazekii}
2992.1  1.1     100 % (Q:100.0 %/S:100.0 %)     tRNA delta(2)-isopentenylpyrophosphate (miaA) {Agrobacterium tumefaciens}
1974.1  1.1      46 % (Q:100.5 %/S:100.2 %)     tRNA modification GTPase (thdF) {Neisseria meningitidis MC58}
1079.1  1.1      64 % (Q:102.2 %/S: 99.1 %)     tRNA pseudouridine 55 synthase (truB) {Pseudomonas aeruginosa}
2778.1  1.1      62 % (Q: 93.2 %/S:100.0 %)     tRNA pseudouridine synthase I (truA) {Zymomonas mobilis}
851.1   1.1      79 % (Q: 97.0 %/S: 97.0 %)     tRNA-(guanine-N1)-methyltransferase (trmD) {e. coli}
1761.1  1.1      68 % (Q: 92.1 %/S: 84.8 %)     tRNA/rRNA methyltransferase (lasT) {Azotobacter vinelandii}
3029.1  1.1      66 % (Q: 88.2 %/S: 98.7 %)     tRNA/rRNA metyltransferase (xxxX) {Rickettsia prowazekii}
2184.1  1.1      74 % (Q:100.0 %/S: 99.7 %)     tryptophan-tRNA ligase (trpS) {Synechocystis sp}

11.7. TRANSLATION/TRANSLATION FACTORS (16 genes)

2002.1  1.1      99 % (Q:100.0 %/S:100.0 %)     elongation factor TU (tuf) {Agrobacterium tumefaciens}
3046.1  1.1      99 % (Q:100.0 %/S:100.0 %)     elongation factor TU (tuf) {Agrobacterium tumefaciens}
3559.1  1.1      86 % (Q: 98.7 %/S: 99.8 %)     GTP-binding elongation factor (lepA) {Rickettsia prowazekii}
4334.1  1.1      84 % (Q:100.0 %/S: 99.5 %)     GTP-binding tyrosin phosphorylated protein (typA) {Rickettsia prowazekii}
624.1   1.1      72 % (Q: 98.1 %/S: 97.5 %)     large atp-dependant helicase-related protein (lhr) {Methanococcus jannaschii}
4230.1  2.1      74 % (Q: 98.9 %/S: 99.2 %)     peptide chain release factor 1 (prfA) {Rickettsia prowazekii}
542.1   1.1      75 % (Q: 99.1 %/S: 99.7 %)     peptide chain release factor 2 (prfB) {Haemophilus influenza}
2215.1  1.1      79 % (Q:100.4 %/S: 99.8 %)     peptide chain release factor 3 (prfC) {Pseudomonas aeruginosa}
730.1   1.1      71 % (Q:100.0 %/S:100.5 %)     ribosome recycling factor (rrf) {Brucella melitensis}
2001.1  1.1      98 % (Q:100.0 %/S:100.0 %)     translation elongation factor G (fusA) {Agrobacterium tumefaciens}
732.1   1.1      68 % (Q: 99.0 %/S: 99.3 %)     translation elongation factor Ts (tsf) {Bartonella quintana}
3547.1  1.1      86 % (Q: 97.1 %/S: 76.4 %)     translation initiation factor 3 (infC) {Brucella abortus}
1782.1  1.1      95 % (Q: 72.7 %/S:100.0 %)     translation initiation factor IF-1 (infA) {Rickettsia prowazekii}
1081.1  1.1      67 % (Q:100.0 %/S:101.2 %)     translation initiation factor IF-2 (infB) {Bacillus stearothermophilus}
678.1   3.1      56 % (Q: 88.5 %/S: 87.1 %)     translation initiation inhibitor (xxxX) {Pyrococcus abyssi}
1201.1  2.1      61 % (Q: 85.2 %/S: 87.1 %)     translation initiation inhibitor (xxxX) {Deinococcus radiodurans}

11.99. TRANSLATION/OTHER (1 genes)

1680.1  1.1      78 % (Q: 91.3 %/S: 91.8 %)     SSRA-binding protein (smpB) {Bradyrhizobium japonicum}

12.1. REGULATORY FUNCTIONS/GENERAL (62 genes)

2362.1  1.1     100 % (Q:100.0 %/S:100.0 %)     adenylate cyclase (cya) {Sinorhizobium meliloti}
4263.1  1.1      31 % (Q: 44.7 %/S: 75.2 %)     adenylate cyclase (cyaA) {Synechocystis sp}
694.1   2.1      28 % (Q: 95.2 %/S: 78.3 %)     adenylate cyclase 1 (cyaA) {syphilis treponeme}
577.1   4.1     100 % (Q:100.0 %/S:100.0 %)     autoinducer synthesis protein (traI) {Agrobacterium tumefaciens}
4657.1  2.1      42 % (Q:103.0 %/S: 91.2 %)     C factor (csgA) {Plectonema boryanum}
4261.1  1.1      65 % (Q: 97.4 %/S: 97.4 %)     cAMP-dependent protein kinase regulatory subunit (xxxX) {Blastocladiella emersonii}
2349.1  1.1      77 % (Q:100.6 %/S:100.0 %)     exopolysaccharide II synthesis transcriptional activator ExpG (mucS) {Bradyrhizobium japonicum}
4458.1  2.1      72 % (Q:100.0 %/S:100.0 %)     extragenic suppressor protein SuhB (suhB) {Escherichia coli}
2179.1  1.1      83 % (Q: 99.3 %/S: 99.3 %)     ferric uptake regulator (fur) {Rhizobium leguminosarum}
367.1   1.1      44 % (Q: 98.7 %/S: 97.0 %)     Fnr-like transcriptional activator (xxxX) {Paracoccus denitrificans}
484.1   1.1      60 % (Q: 97.4 %/S: 97.6 %)     glutamate-ammonia-ligase adenylyltransferase {}
15002.1 1.1      44 % (Q: 82.9 %/S:100.0 %)     glutamine synthetase translation inhibitor (xxxX) {Rhizobium leguminosarum}
2203.1  1.1     100 % (Q:100.0 %/S:100.0 %)     heat-inducible transcription repressor (hrcA) {Agrobacterium tumefaciens}
1525.1  1.1      93 % (Q: 96.3 %/S: 98.7 %)     host factor I (hfq) {Brucella abortus}
997.1   1.1      79 % (Q: 92.9 %/S: 97.2 %)     integration host factor alpha subunit (ihfA) {Rhodobacter capsulatus}
1533.1  1.1      78 % (Q: 93.8 %/S:100.0 %)     nitrogen regulation protein (nifR) {Rhizobium leguminosarum bv. phaseoli}
2580.1  1.1      98 % (Q:100.0 %/S:100.0 %)     nitrogen regulatory protein PII (glnB) {Sinorhizobium meliloti}
3301.1  1.1      87 % (Q:100.0 %/S:100.0 %)     nitrogen regulatory protein PII (glnK) {Rhizobium etli}
713.1   1.1      38 % (Q: 96.6 %/S:100.0 %)     PemI protein (pemI) {Plasmid R100}
712.1   1.1      37 % (Q: 94.1 %/S: 92.6 %)     PemK protein (pemK) {Morganella morganii}
2730.1  1.1      85 % (Q: 97.9 %/S: 99.6 %)     phosphate transport system regulatory protein (phoU) {Sinorhizobium meliloti}
3530.1  1.1      51 % (Q: 93.4 %/S: 90.2 %)     regulator protein pecM (pecM) {Vogesella indigofera}
4079.1  2.1      29 % (Q: 77.4 %/S: 44.2 %)     serine/threonine protein kinase (xxxX) {Myxococcus xanthus}
4471.1  2.1      57 % (Q: 98.8 %/S: 99.2 %)     sigma 54 dependent transcriptional activator (xxxX) {Caulobacter crescentus}
3457.1  1.1      73 % (Q:100.0 %/S:100.0 %)     sugar fermentation stimulation protein (sfsA) {Sinorhizobium meliloti}
46.1    1.1      99 % (Q:100.0 %/S:100.0 %)     transcriptional regulator (ros) {Agrobacterium tumefaciens}
115.1   4.1     100 % (Q:100.0 %/S:100.0 %)     transcriptional regulator (accR) {Agrobacterium tumefaciens}
119.1   4.1     100 % (Q:100.0 %/S:100.0 %)     transcriptional regulator (traR) {Agrobacterium tumefaciens C58}
275.1   3.1      27 % (Q: 99.1 %/S:102.2 %)     transcriptional regulator (xxxX) {Bacillus halodurans}
293.1   1.1      45 % (Q: 76.5 %/S: 25.5 %)     transcriptional regulator (xxxX) {Pseudomonas aeruginosa}
646.1   3.1      69 % (Q: 96.4 %/S: 17.6 %)     transcriptional regulator (xxxX) {Pseudomonas aeruginosa}
693.1   2.1      50 % (Q: 71.1 %/S: 65.1 %)     transcriptional regulator (xxxX) {Sinorhizobium meliloti}
773.1   1.1      62 % (Q:100.0 %/S: 98.7 %)     transcriptional regulator (xxxX) {Bacteriophage 16-3}
791.1   1.1      32 % (Q: 67.8 %/S: 93.6 %)     transcriptional regulator (xxxX) {Xylella fastidiosa}
928.1   1.1      51 % (Q: 98.4 %/S:100.0 %)     transcriptional regulator (acoR) {Pseudomonas aeruginosa}
1416.1  1.1      55 % (Q: 93.3 %/S: 94.0 %)     transcriptional regulator (xxxX) {Mesorhizobium loti}
1500.1  1.1      34 % (Q: 98.4 %/S: 96.6 %)     transcriptional regulator (prtR) {Pseudomonas fluorescens}
1700.1  2.1      35 % (Q: 91.8 %/S:104.7 %)     transcriptional regulator (xxxX) {Bacillus halodurans}
1702.1  2.1      57 % (Q: 98.8 %/S: 96.6 %)     transcriptional regulator (kdgR) {Escherichia coli}
1737.1  1.1      35 % (Q: 38.1 %/S: 50.0 %)     transcriptional regulator (xxxX) {Bacillus subtilis}
1961.1  1.1      57 % (Q: 95.0 %/S: 94.3 %)     transcriptional regulator (xxxX) {Deinococcus radiodurans}
2042.1  1.1      29 % (Q: 98.7 %/S: 97.2 %)     transcriptional regulator (xxxX) {Bacillus halodurans}
2172.1  1.1      90 % (Q:100.0 %/S:100.0 %)     transcriptional regulator (xxxX) {Sinorhizobium meliloti}
2254.1  1.1      85 % (Q: 99.6 %/S: 99.6 %)     transcriptional regulator (xxxX) {Mycobacterium bovis BCG}
2285.1  1.1      67 % (Q:102.3 %/S: 93.8 %)     transcriptional regulator (xxxX) {Mycobacterium tuberculosis}
2554.1  2.1      32 % (Q: 97.1 %/S: 96.6 %)     transcriptional regulator (xxxX) {Streptomyces coelicolor A3(2)}
2564.1  2.1      39 % (Q:100.6 %/S:100.2 %)     transcriptional regulator (xxxX) {Mycobacterium tuberculosis}
3005.1  1.1      33 % (Q: 47.8 %/S: 72.0 %)     transcriptional regulator (xxxX) {Pseudomonas aeruginosa}
3507.1  1.1      25 % (Q: 96.7 %/S: 91.5 %)     transcriptional regulator (xxxX) {Streptomyces coelicolor}
3555.1  1.1      45 % (Q: 86.5 %/S: 89.3 %)     transcriptional regulator (xxxX) {Streptomyces coelicolor}
3684.1  2.1      31 % (Q: 92.9 %/S: 92.9 %)     transcriptional regulator (xxxX) {Bacillus halodurans}
3792.1  2.1      81 % (Q: 96.9 %/S: 96.4 %)     transcriptional regulator (xxxX) {Methylobacterium extorquens}
3880.1  3.1      36 % (Q: 53.3 %/S: 25.5 %)     transcriptional regulator (xxxX) {Pyrococcus horikoshii}
4159.1  2.1      31 % (Q: 71.9 %/S: 90.8 %)     transcriptional regulator (xxxX) {Methanococcus jannaschii}
4740.1  2.1      47 % (Q:100.5 %/S: 94.3 %)     transcriptional regulator (acoR) {Alcaligenes eutrophus}
2269.1  1.1      64 % (Q: 99.7 %/S: 99.7 %)     transcriptional regulator repressor (aglR) {Sinorhizobium meliloti}
1425.1  4.1      96 % (Q:100.0 %/S:100.0 %)     transcriptional regulator, HTH family (xxxX) {Agrobacterium tumefaciens}
2549.1  2.1      57 % (Q: 93.1 %/S: 79.9 %)     transcriptional regulator, HTH family (xxxX) {Agrobacterium rhizogenes}
183.1   4.1     100 % (Q:100.0 %/S:100.0 %)     transcriptional repressor (traM) {Agrobacterium tumefaciens}
3521.1  1.1      40 % (Q: 99.3 %/S: 97.4 %)     tryptophan-rich sensory protein (tspO) {Archaeoglobus fulgidus}
5085.1  1.1      34 % (Q: 69.9 %/S: 58.8 %)     tyrosine/serine protein phosphatase {}
2187.1  1.1      75 % (Q: 99.9 %/S: 97.2 %)     uridylyltransferase/uridylyl-removing enzyme UTase (glnD) {Rhizobium leguminosarum bv. viciae}

12.2. REGULATORY FUNCTIONS/TWO-COMPONENT (103 genes)

2821.1  1.1      37 % (Q: 66.8 %/S: 78.0 %)     bacteriophytochrome protein (xxxX) {Pseudomonas aeruginosa}
3030.1  1.1      38 % (Q:101.8 %/S: 99.7 %)     bacteriophytochrome protein (xxxX) {Anabaena PCC7120}
3688.1  2.1      89 % (Q: 96.7 %/S: 97.5 %)     chemotaxis response regulator (xxxX) {Rhizobium etli}
247.1   1.1      83 % (Q: 96.2 %/S: 97.4 %)     two component response regulator (ctrA) {Brucella abortus}
267.1   2.1      80 % (Q: 99.1 %/S: 99.1 %)     two component response regulator (kdpE) {Vibrio cholerae}
373.1   1.1      72 % (Q:100.0 %/S: 99.8 %)     two component response regulator (pleD) {Rhizobium leguminosarum}
374.1   1.1      99 % (Q:100.0 %/S:100.0 %)     two component response regulator (divK) {Caulobacter crescentus}
473.1   1.1      89 % (Q: 99.6 %/S: 99.6 %)     two component response regulator (phoP) {Rhizobium leguminosarum}
481.1   1.1      76 % (Q: 88.1 %/S: 92.9 %)     two component response regulator (ragA) {Bradyrhizobium japonicum}
633.1   1.1      61 % (Q: 97.2 %/S: 95.9 %)     two component response regulator (xxxX) {Bradyrhizobium japonicum}
689.1   2.1      42 % (Q: 99.5 %/S: 97.7 %)     two component response regulator (xxxX) {Pseudomonas aeruginosa}
845.1   1.1      51 % (Q: 98.0 %/S: 98.2 %)     two component response regulator (dctD) {Sinorhizobium meliloti}
944.1   1.1      71 % (Q: 92.0 %/S:100.0 %)     two component response regulator (petR) {Rhodobacter capsulatus}
976.1   2.1      53 % (Q:100.0 %/S: 97.8 %)     two component response regulator (phoP) {Brucella suis}
1027.1  1.1      88 % (Q: 92.3 %/S: 93.8 %)     two component response regulator (actR) {Rhizobium meliloti strain WSM419}
1217.1  2.1      46 % (Q:100.0 %/S:100.8 %)     two component response regulator (xxxX) {Caulobacter crescentus}
1527.1  1.1      77 % (Q:100.0 %/S:100.2 %)     two component response regulator (ntrX) {Azorhizobium caulinodans}
1531.1  1.1     100 % (Q:100.0 %/S:100.0 %)     two component response regulator (ntrC) {Agrobacterium tumefaciens}
1560.1  3.1      38 % (Q: 81.0 %/S: 24.6 %)     two component response regulator (xxxX) {Methanobacterium thermoautotrophicum}
1606.1  3.1      46 % (Q: 99.6 %/S: 99.6 %)     two component response regulator (basR) {Rhizobium sp. NGR234}
1621.1  1.1      65 % (Q: 99.1 %/S: 98.2 %)     two component response regulator (xxxX) {Escherichia coli}
1653.1  1.1      36 % (Q: 96.5 %/S:100.0 %)     two component response regulator (xxxX) {Aeromonas jandaei}
1670.1  1.1      33 % (Q: 95.2 %/S: 59.8 %)     two component response regulator (xxxX) {Sinorhizobium meliloti}
2318.1  3.1      57 % (Q: 97.7 %/S: 97.7 %)     two component response regulator (xxxX) {Rhizobium leguminosarum}
2337.1  3.1      33 % (Q: 94.1 %/S: 96.9 %)     two component response regulator (amiR) {Pseudomonas aeruginosa}
2391.1  1.1      40 % (Q: 94.1 %/S: 86.0 %)     two component response regulator (nwsB) {Bradyrhizobium japonicum}
2729.1  1.1      92 % (Q:100.0 %/S:100.0 %)     two component response regulator (phoB) {Rhizobium meliloti}
2864.1  3.1      46 % (Q: 99.5 %/S: 98.6 %)     two component response regulator (narL) {Streptomyces coelicolor}
3031.1  1.1      55 % (Q: 91.4 %/S: 95.2 %)     two component response regulator (xxxX) {Methanobacterium thermoautotrophicum (strain Delta H)}
3033.1  1.1      43 % (Q: 87.1 %/S: 88.5 %)     two component response regulator (exsF) {Sinorhizobium meliloti}
3035.1  1.1      71 % (Q:100.0 %/S: 98.0 %)     two component response regulator (xxxX) {Methanobacterium thermoautotrophicum (strain Delta H)}
3134.1  1.1      46 % (Q: 98.7 %/S: 96.5 %)     two component response regulator (tctD) {Xylella fastidiosa}
3195.1  1.1      56 % (Q:100.0 %/S:100.0 %)     two component response regulator (xxxX) {Rhizobium sp. strain NGR234}
3306.1  1.1      82 % (Q:100.0 %/S:100.0 %)     two component response regulator (mtrA) {Bacillus halodurans}
3355.1  2.1      42 % (Q: 76.2 %/S: 73.7 %)     two component response regulator (xxxX) {Methanobacterium thermoautotrophicum}
3383.1  2.1      53 % (Q: 99.1 %/S: 99.1 %)     two component response regulator (copR) {Agrobacterium tumefaciens}
3479.1  1.1      33 % (Q: 94.0 %/S: 56.4 %)     two component response regulator (rrpX) {Aeromonas jandaei}
3712.1  2.1      75 % (Q: 99.5 %/S: 89.8 %)     two component response regulator (nasT) {Azotobacter vinelandii}
3720.1  2.1      65 % (Q: 95.7 %/S: 82.1 %)     two component response regulator (nwsB) {Bradyrhizobium japonicum}
3876.1  3.1      40 % (Q:112.9 %/S: 91.3 %)     two component response regulator (phoB) {Zymomonas mobilis}
3877.1  3.1      39 % (Q: 96.7 %/S: 93.6 %)     two component response regulator (phoB) {Sinorhizobium meliloti}
4102.1  2.1      37 % (Q: 94.1 %/S: 51.1 %)     two component response regulator (xxxX) {Deinococcus radiodurans}
4113.1  2.1      81 % (Q: 98.3 %/S: 98.3 %)     two component response regulator (xxxX) {Bacillus subtilis}
4220.1  2.1      69 % (Q:100.0 %/S:100.0 %)     two component response regulator (xxxX) {Methanobacterium thermoautotrophicum}
4485.1  2.1      60 % (Q: 99.6 %/S: 99.6 %)     two component response regulator (xxxX) {Salmonella typhimurium}
4509.1  2.1      32 % (Q: 97.3 %/S: 89.5 %)     two component response regulator (xxxX) {Mesorhizobium loti}
4685.1  2.1      48 % (Q: 96.3 %/S: 82.0 %)     two component response regulator (xxxX) {Brucella melitensis}
4704.1  2.1      39 % (Q: 92.7 %/S: 96.6 %)     two component response regulator (drrA) {Thermotoga maritima}
4710.1  2.1      54 % (Q: 93.1 %/S: 89.4 %)     two component response regulator (nodW) {Bradyrhizobium japonicum}
4711.1  2.1      45 % (Q: 93.5 %/S: 90.6 %)     two component response regulator (xxxX) {Bradyrhizobium japonicum}
2479.1  2.1      71 % (Q: 99.8 %/S: 98.5 %)     two component response regulator for C4-dicarboxylate transport (dctD) {Sinorhizobium meliloti}
82.1    1.1      51 % (Q:104.7 %/S:101.7 %)     two component sensor kinase (xxxX) {Sinorhizobium meliloti}
268.1   2.1      72 % (Q: 99.3 %/S: 97.8 %)     two component sensor kinase (kdpD) {E. coli}
320.1   1.1      39 % (Q: 48.0 %/S: 96.6 %)     two component sensor kinase (xxxX) {Synechocystis sp. PCC 6803}
474.1   1.1      71 % (Q:100.2 %/S:100.0 %)     two component sensor kinase (popQ) {Rhizobium leguminosarum}
482.1   1.1      53 % (Q:103.0 %/S:100.2 %)     two component sensor kinase (ragB) {Bradyrhizobium japonicum}
690.1   2.1      26 % (Q:101.1 %/S:100.2 %)     two component sensor kinase (xxxX) {Escherichia coli}
745.1   1.1      63 % (Q: 98.4 %/S: 74.3 %)     two component sensor kinase (cckA) {Caulobacter crescentus}
844.1   1.1      38 % (Q: 96.2 %/S: 97.3 %)     two component sensor kinase (dctB) {Rhizobium leguminosarum}
874.1   1.1      61 % (Q: 41.9 %/S: 91.6 %)     two component sensor kinase (pleC) {Caulobacter crescentus}
943.1   1.1      59 % (Q: 97.4 %/S: 94.9 %)     two component sensor kinase (envZ) {Escherichia coli}
975.1   2.1      28 % (Q:101.1 %/S: 98.9 %)     two component sensor kinase (phoQ) {Xylella fastidiosa}
1005.1  1.1      49 % (Q: 94.0 %/S: 97.3 %)     two component sensor kinase (xxxX) {Caulobacter crescentus}
1028.1  1.1      68 % (Q: 95.6 %/S: 95.4 %)     two component sensor kinase (actS) {Sinorhizobium meliloti}
1172.1  1.1      30 % (Q: 51.4 %/S: 36.1 %)     two component sensor kinase (xxxx) {Pseudomonas aeruginosa (strain PAO1)}
1528.1  1.1      56 % (Q: 98.5 %/S: 98.4 %)     two component sensor kinase (ntrY) {Azorhizobium caulinodans}
1532.1  1.1      84 % (Q: 97.1 %/S: 97.1 %)     two component sensor kinase (ntrB) {Rhizobium meliloti}
1561.1  3.1      62 % (Q: 53.6 %/S: 41.4 %)     two component sensor kinase (xxxX) {Methanobacterium thermoautotrophicum}
1562.1  3.1      42 % (Q: 80.8 %/S: 75.5 %)     two component sensor kinase (xxxX) {Sinorhizobium meliloti}
1605.1  3.1      33 % (Q:100.4 %/S: 99.6 %)     two component sensor kinase (basS) {Synechocystis sp}
1620.1  1.1      41 % (Q:100.2 %/S: 98.7 %)     two component sensor kinase (xxxX) {Escherichia coli}
1825.1  2.1      30 % (Q: 93.4 %/S: 94.2 %)     two component sensor kinase (xxxX) {Pseudomonas aeruginosa}
2055.1  1.1      52 % (Q: 99.2 %/S:100.2 %)     two component sensor kinase (xxxX) {caulobacter crescentus}
2291.1  1.1      44 % (Q: 97.9 %/S: 59.1 %)     two component sensor kinase (pleC) {Caulobacter crescentus}
2319.1  3.1      34 % (Q: 98.9 %/S:100.0 %)     two component sensor kinase (xxxX) {Rhizobium leguminosarum}
2335.1  3.1      36 % (Q: 99.6 %/S: 64.1 %)     two component sensor kinase (xxxX) {Sinorhizobium meliloti}
2336.1  3.1      44 % (Q: 93.5 %/S: 93.0 %)     two component sensor kinase (amiC) {Pseudomonas aeruginosa}
2392.1  1.1      37 % (Q: 50.2 %/S: 48.6 %)     two component sensor kinase (fixL) {Azorhizobium caulinodans}
2735.1  1.1      46 % (Q: 96.4 %/S: 96.7 %)     two component sensor kinase (phoR) {Bacillus subtilis}
2762.1  1.1      55 % (Q: 72.3 %/S: 97.8 %)     two component sensor kinase (xxxX) {Salmonella typhimurium}
2863.1  3.1      35 % (Q: 97.6 %/S:100.7 %)     two component sensor kinase (xxxX) {Streptomyces coelicolor}
3032.1  1.1      44 % (Q: 60.0 %/S: 26.3 %)     two component sensor kinase (exsG) {Sinorhizobium meliloti}
3034.1  1.1      44 % (Q: 98.3 %/S: 96.7 %)     two component sensor kinase (xxxX) {Deinococcus radiodurans (strain R1)}
3036.1  1.1      46 % (Q: 98.0 %/S: 98.5 %)     two component sensor kinase (fsrR) {Sinorhizobium meliloti}
3133.1  1.1      33 % (Q: 95.5 %/S: 98.0 %)     two component sensor kinase (tctE) {Pseudomonas aeruginosa}
3194.1  1.1      44 % (Q: 96.0 %/S: 96.2 %)     two component sensor kinase (xxxX) {Streptomyces coelicolor}
3382.1  2.1      38 % (Q:100.5 %/S: 98.5 %)     two component sensor kinase (copS) {Pseudomonas aeruginosa}
3903.1  3.1      51 % (Q: 98.0 %/S: 98.8 %)     two component sensor kinase (exsG) {Sinorhizobium meliloti}
4103.1  2.1      44 % (Q: 66.9 %/S: 58.7 %)     two component sensor kinase (xxxX) {Bradyrhizobium japonicum}
4112.1  2.1      63 % (Q: 97.6 %/S: 96.6 %)     two component sensor kinase (xxxX) {Deinococcus radiodurans}
4221.1  2.1      41 % (Q: 87.4 %/S: 93.0 %)     two component sensor kinase (xxxX) {Sinorhizobium meliloti}
4222.1  2.1      28 % (Q: 97.4 %/S:100.2 %)     two component sensor kinase (xxxX) {Sinorhizobium meliloti}
4412.1  2.1      27 % (Q:100.0 %/S: 98.5 %)     two component sensor kinase (fecR) {Pseudomonas aeruginosa}
4486.1  2.1      42 % (Q:101.1 %/S:100.7 %)     two component sensor kinase (xxxX) {Pseudomonas aeruginosa}
4705.1  2.1      27 % (Q: 70.4 %/S: 54.5 %)     two component sensor kinase (xxxX) {Pseudomonas aeruginosa}
4709.1  2.1      36 % (Q: 57.6 %/S: 37.4 %)     two component sensor kinase (nwsA) {Bradyrhizobium japonicum}
2478.1  2.1      53 % (Q: 98.7 %/S: 97.3 %)     two component sensor kinase for C4-dicarboxylate transport (dctB) {Rhizobium leguminosarum}
1787.1  1.1      53 % (Q:100.4 %/S:100.4 %)     two component sensor kinase/response regulator hybrid (xxxX) {Pseudomonas aeruginosa}
2190.1  1.1      35 % (Q: 86.1 %/S: 84.5 %)     two component sensor kinase/response regulator hybrid (barA) {Salmonella typhimurium}
2322.1  3.1      44 % (Q: 74.5 %/S: 53.8 %)     two component sensor kinase/response regulator hybrid (xxxX) {Pseudomonas syringae pv . syringae}
3253.1  1.1      35 % (Q:104.0 %/S: 92.0 %)     two component sensor kinase/response regulator hybrid (xxxX) {Pseudomonas syringae pv . syringae}
4123.1  2.1      40 % (Q: 74.5 %/S: 83.7 %)     two component sensor kinase/response regulator hybrid (cvgS) {Pseudomonas syringae}
4684.1  2.1      37 % (Q: 46.0 %/S: 65.4 %)     two component sensor kinase/response regulator hybrid (xxxX) {Pseudomonas aeruginosa}

12.3. REGULATORY FUNCTIONS/LYSR (74 genes)

165.1   1.1      45 % (Q: 90.0 %/S: 94.7 %)     transcriptional regulator, LysR family (oriC) {Mycobacterium tuberculosis}
203.1   1.1      59 % (Q: 99.6 %/S: 84.6 %)     transcriptional regulator, LysR family (xxxX) {Escherichia coli}
221.1   4.1      99 % (Q:100.0 %/S:100.0 %)     transcriptional regulator, LysR family (xxxX) {Agrobacterium tumefaciens SAKURA}
257.1   3.1      53 % (Q: 92.0 %/S: 96.3 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
432.1   3.1      51 % (Q: 93.7 %/S: 99.0 %)     transcriptional regulator, LysR family (xxxX) {Rhizobium leguminosarum}
458.1   1.1      41 % (Q: 99.7 %/S: 87.9 %)     transcriptional regulator, LysR family (xxxX) {Vibrio cholerae}
592.1   4.1      81 % (Q: 97.3 %/S: 95.1 %)     transcriptional regulator, LysR family (gcvA) {Escherichia coli}
656.1   3.1      29 % (Q: 85.6 %/S: 89.7 %)     transcriptional regulator, LysR family (nocR) {Agrobacterium tumefaciens}
664.1   3.1      42 % (Q: 95.2 %/S: 97.1 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
687.1   2.1      39 % (Q: 95.4 %/S: 97.3 %)     transcriptional regulator, LysR family (xxxX) {Escherichia coli}
740.1   1.1      32 % (Q:100.7 %/S: 96.0 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
969.1   2.1      72 % (Q: 93.8 %/S: 96.3 %)     transcriptional regulator, LysR family (xxxX) {Mycobacterium leprae}
1113.1  2.1      39 % (Q: 97.4 %/S: 96.1 %)     transcriptional regulator, LysR family (xxxX) {Vibrio cholerae}
1197.1  1.1      43 % (Q: 95.7 %/S: 97.3 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
1389.1  1.1      34 % (Q: 87.8 %/S: 81.7 %)     transcriptional regulator, LysR family (oxyR) {Xanthomonas campestris}
1435.1  4.1      45 % (Q: 92.4 %/S: 97.7 %)     transcriptional regulator, LysR family (xxxX) {Streptomyces coelicolor A3(2)}
1442.1  4.1      38 % (Q: 94.1 %/S: 99.7 %)     transcriptional regulator, LysR family (xxxX) {Mesorhizobium loti}
1479.1  2.1      37 % (Q: 94.4 %/S: 89.7 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
1548.1  3.1      55 % (Q: 99.0 %/S: 99.3 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
1576.1  3.1      64 % (Q: 98.0 %/S: 97.3 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
1578.1  3.1      37 % (Q: 97.3 %/S: 98.0 %)     transcriptional regulator, LysR family (xxxX) {Bradyrhizobium japonicum}
1587.1  3.1      35 % (Q: 92.3 %/S: 96.8 %)     transcriptional regulator, LysR family (xxxX) {Ralstonia sp. U2}
1589.1  3.1      31 % (Q: 96.4 %/S: 94.8 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
1596.1  3.1      38 % (Q: 94.8 %/S: 98.3 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
1598.1  3.1      53 % (Q: 98.7 %/S: 98.4 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
1641.1  1.1      57 % (Q:100.9 %/S: 99.7 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
1651.1  1.1      37 % (Q: 99.3 %/S: 96.4 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
1820.1  2.1      34 % (Q: 87.4 %/S: 95.6 %)     transcriptional regulator, LysR family (xxxX) {Caulobacter crescentus}
2101.1  2.1      31 % (Q: 93.3 %/S: 95.5 %)     transcriptional regulator, LysR family (xxxX) {Salmonella typhimurium}
2169.1  1.1      51 % (Q: 91.9 %/S: 93.1 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
2283.1  1.1      38 % (Q: 84.8 %/S: 97.2 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
2414.1  2.1      84 % (Q:100.0 %/S:100.0 %)     transcriptional regulator, LysR family (xxxX) {Bradyrhizobium japonicum}
2421.1  2.1      72 % (Q: 95.6 %/S: 92.7 %)     transcriptional regulator, LysR family (hexA) {Pectobacterium carotovorum}
2436.1  2.1      37 % (Q: 97.9 %/S: 90.7 %)     transcriptional regulator, LysR family (xxxX) {Streptomyces coelicolor}
2583.1  1.1      58 % (Q: 97.7 %/S: 97.3 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
2645.1  2.1      66 % (Q: 98.3 %/S: 97.7 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
2690.1  2.1     100 % (Q:100.0 %/S:100.0 %)     transcriptional regulator, LysR family (pcaQ) {Agrobacterium tumefaciens}
2839.1  1.1      70 % (Q: 99.3 %/S:100.0 %)     transcriptional regulator, LysR family (xxxX) {Azospirillum brasilense}
2843.1  1.1      41 % (Q: 90.4 %/S:101.8 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
2857.1  3.1      30 % (Q: 97.8 %/S:103.0 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas putida}
2889.1  3.1      46 % (Q:101.1 %/S: 96.9 %)     transcriptional regulator, LysR family (dgdR) {Burkholderia cepacia (Pseudomonas cepacia)}
2906.1  3.1      39 % (Q: 97.0 %/S: 94.8 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
2907.1  3.1      31 % (Q: 95.9 %/S: 96.6 %)     transcriptional regulator, LysR family (xxxX) {Bordetella pertussis}
3065.1  2.1      65 % (Q: 99.0 %/S: 98.3 %)     transcriptional regulator, LysR family (ptxR) {Pseudomonas aeruginosa}
3144.1  1.1      48 % (Q: 99.0 %/S: 96.4 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
3173.1  1.1      44 % (Q:100.3 %/S: 98.1 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
3236.1  1.1      55 % (Q: 94.5 %/S: 97.0 %)     transcriptional regulator, LysR family (xxxX) {Vibrio cholerae}
3269.1  1.1      90 % (Q: 95.1 %/S: 95.7 %)     transcriptional regulator, LysR family (gbpR) {Agrobacterium tumefaciens}
3377.1  2.1      38 % (Q: 99.7 %/S: 97.7 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
3381.1  2.1      41 % (Q: 98.3 %/S: 98.3 %)     transcriptional regulator, LysR family (oxyR) {Brucella abortus}
3540.1  1.1      65 % (Q:100.0 %/S:100.0 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
3589.1  1.1      59 % (Q:100.0 %/S:100.0 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
3628.1  2.1      63 % (Q: 94.8 %/S: 97.0 %)     transcriptional regulator, LysR family (xxxX) {Rhizobium rhizogenes}
3630.1  2.1      90 % (Q: 99.7 %/S: 99.7 %)     transcriptional regulator, LysR family (xxxX) {Vibrio cholerae}
3646.1  2.1      40 % (Q: 99.3 %/S: 94.8 %)     transcriptional regulator, LysR family (metR) {Salmonella typhimurium}
3648.1  2.1      40 % (Q: 97.9 %/S: 91.7 %)     transcriptional regulator, LysR family {}
3694.1  2.1      69 % (Q: 97.2 %/S: 98.6 %)     transcriptional regulator, LysR family {}
3729.1  2.1      52 % (Q: 98.0 %/S: 97.7 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
3731.1  2.1      88 % (Q: 99.0 %/S: 80.2 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
3740.1  2.1      40 % (Q:100.0 %/S: 98.7 %)     transcriptional regulator, LysR family (nac) {Klebsiella aerogenes}
3749.1  2.1      50 % (Q: 99.7 %/S: 99.0 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
3756.1  2.1      73 % (Q: 99.3 %/S: 99.0 %)     transcriptional regulator, LysR family (xxxX) {Escherichia coli}
3906.1  3.1      92 % (Q:100.0 %/S: 96.6 %)     transcriptional regulator, LysR family (ttgS) {Pseudomonas putida}
3982.1  2.1      34 % (Q: 99.7 %/S: 92.9 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
3999.1  2.1      59 % (Q: 96.1 %/S: 97.0 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
4006.1  2.1      36 % (Q: 99.3 %/S: 97.3 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
4045.1  2.1      60 % (Q: 99.7 %/S:100.3 %)     transcriptional regulator, LysR family (gstR) {Escherichia coli}
4187.1  2.1      39 % (Q: 95.7 %/S: 99.7 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
4212.1  2.1      44 % (Q: 99.3 %/S: 98.3 %)     transcriptional regulator, LysR family (gcvA) {Pseudomonas aeruginosa}
4245.1  1.1      49 % (Q: 93.8 %/S: 95.4 %)     transcriptional regulator, LysR family (xxxX) {Pseudomonas aeruginosa}
4549.1  2.1      68 % (Q: 98.3 %/S: 98.6 %)     transcriptional regulator, LysR family (ampR) {Ochrobactrum anthropi}
4616.1  2.1      39 % (Q:100.7 %/S: 90.6 %)     transcriptional regulator, LysR family (xxxX) {Mesorhizobium loti}
4632.1  2.1      42 % (Q: 99.3 %/S:100.3 %)     transcriptional regulator, LysR family (xxxX) {Xylella fastidiosa}
216.1   4.1     100 % (Q:100.0 %/S: 90.7 %)     transcriptional regulator, LysR family for nopaline metabolism (nocR) {Agrobacterium tumefaciens pTiC58}

12.4. REGULATORY FUNCTIONS/ARAC (33 genes)

294.1   1.1      25 % (Q: 99.4 %/S: 99.7 %)     transcriptional regulator, AraC family (xxxX) {Pseudomonas aeruginosa}
394.1   1.1      37 % (Q:100.4 %/S: 96.5 %)     transcriptional regulator, AraC family (xxxX) {Pseudomonas aeruginosa}
430.1   3.1      68 % (Q: 99.1 %/S: 79.5 %)     transcriptional regulator, AraC family (xxxX) {Pseudomonas aeruginosa}
1160.1  2.1      56 % (Q: 63.0 %/S: 97.2 %)     transcriptional regulator, AraC family (xxxX) {Pseudomonas aeruginosa}
1382.1  1.1      34 % (Q: 95.1 %/S: 91.7 %)     transcriptional regulator, AraC family (xxxX) {Streptomyces coelicolor A3(2)}
1538.1  1.1      30 % (Q:100.8 %/S: 96.9 %)     transcriptional regulator, AraC family (xxxX) {Pseudomonas aeruginosa}
1550.1  3.1      51 % (Q: 59.3 %/S: 94.3 %)     transcriptional regulator, AraC family (xxxX) {Streptomyces coelicolor A3(2)}
2428.1  2.1      28 % (Q: 98.5 %/S: 57.8 %)     transcriptional regulator, AraC family (xxxX) {Pseudomonas aeruginosa}
2452.1  3.1      36 % (Q: 95.0 %/S: 93.9 %)     transcriptional regulator, AraC family (xxxX) {Sinorhizobium meliloti}
2582.1  1.1      75 % (Q: 93.9 %/S: 97.6 %)     transcriptional regulator, AraC family (xxxX) {Pseudomonas aeruginosa}
2661.1  2.1      34 % (Q: 95.6 %/S:101.3 %)     transcriptional regulator, AraC family {}
2688.1  2.1      43 % (Q: 93.5 %/S: 97.0 %)     transcriptional regulator, AraC family (pobR) {Rhizobium leguminosarum}
2710.1  2.1      42 % (Q:100.4 %/S: 99.3 %)     transcriptional regulator, AraC family (xxxX) {Bacillus halodurans}
2743.1  1.1      46 % (Q: 46.4 %/S: 45.8 %)     transcriptional regulator, AraC family (xxxX) {Pseudomonas aeruginosa}
2871.1  3.1      38 % (Q:101.3 %/S: 99.7 %)     transcriptional regulator, AraC family (xxxX) {Streptomyces coelicolor A3(2)}
3009.1  1.1      44 % (Q: 96.7 %/S: 88.4 %)     transcriptional regulator, AraC family (xxxX) {Pseudomonas aeruginosa}
3090.1  2.1      57 % (Q:101.9 %/S: 97.0 %)     transcriptional regulator, AraC family (xxxX) {Acinetobacter calcoaceticus}
3366.1  2.1      72 % (Q: 99.0 %/S: 93.3 %)     transcriptional regulator, AraC family (agpT) {Sinorhizobium meliloti}
3379.1  2.1      28 % (Q: 83.0 %/S: 85.7 %)     transcriptional regulator, AraC family (xxxX) {Salmonella dublin}
3537.1  1.1      32 % (Q: 98.5 %/S: 96.4 %)     transcriptional regulator, AraC family (xxxX) {Streptomyces coelicolor A3(2)}
3552.1  1.1      32 % (Q: 96.2 %/S: 96.2 %)     transcriptional regulator, AraC family (xxxX) {Vibrio cholerae}
3561.1  1.1      53 % (Q: 89.0 %/S: 89.0 %)     transcriptional regulator, AraC family (xxxX) {Pseudomonas aeruginosa}
3723.1  2.1      32 % (Q: 99.0 %/S: 98.3 %)     transcriptional regulator, AraC family (xxxX) {Vibrio cholerae}
3793.1  2.1      70 % (Q: 97.5 %/S: 97.5 %)     transcriptional regulator, AraC family (glxA) {Sinorhizobium meliloti}
3813.1  2.1      35 % (Q: 37.0 %/S: 36.8 %)     transcriptional regulator, AraC family (xxxX) {Escherichia coli K12}
4089.1  2.1      39 % (Q: 94.3 %/S: 93.7 %)     transcriptional regulator, AraC family (xxxX) {Pseudomonas fluorescens}
4099.1  2.1      41 % (Q: 90.1 %/S: 94.8 %)     transcriptional regulator, AraC family (xxxX) {Pseudomonas aeruginosa}
4197.1  2.1      31 % (Q: 90.8 %/S: 70.6 %)     transcriptional regulator, AraC family (xxxX) {Pseudomonas aeruginosa}
4595.1  2.1      34 % (Q: 31.5 %/S: 33.8 %)     transcriptional regulator, AraC family (xxxX) {Bacillus halodurans}
4613.1  2.1      61 % (Q: 97.0 %/S: 99.0 %)     transcriptional regulator, AraC family (xxxX) {Mesorhizobium loti}
4614.1  2.1      51 % (Q: 90.1 %/S: 87.7 %)     transcriptional regulator, AraC family (xxxX) {Mesorhizobium loti}
4627.1  2.1      46 % (Q: 90.5 %/S: 83.9 %)     transcriptional regulator, AraC family (xxxX) {Pseudomonas aeruginosa}
2454.1  3.1      45 % (Q: 89.4 %/S: 88.4 %)     transcriptional regulator. AraC family (xxxX) {Pseudomonas aeruginosa}

12.5. REGULATORY FUNCTIONS/LACI (20 genes)

62.1    2.1      37 % (Q: 95.2 %/S: 98.8 %)     transcriptional regulator, LacI family (xxxX) {Streptomyces coelicolor A3-2}
259.1   3.1      35 % (Q: 88.9 %/S: 99.4 %)     transcriptional regulator, LacI family (xxxX) {Streptomyces coelicolor A3-2}
418.1   2.1      87 % (Q: 99.1 %/S: 98.8 %)     transcriptional regulator, LacI family (pckR) {Sinorhizobium meliloti}
443.1   3.1     100 % (Q:100.0 %/S: 92.4 %)     transcriptional regulator, LacI family (xxxX) {Agrobacterium tumefaciens C58}
643.1   3.1      38 % (Q:100.9 %/S:100.9 %)     transcriptional regulator, LacI family (xxxX) {Agrobacterium tumefaciens}
903.1   2.1      49 % (Q:100.0 %/S: 98.0 %)     transcriptional regulator, LacI family (xxxX) {Mesorhizobium loti}
1267.1  1.1      55 % (Q: 95.6 %/S: 92.6 %)     transcriptional regulator, LacI family (xxxX) {Sinorhizobium meliloti}
1546.1  3.1      35 % (Q:100.0 %/S:102.1 %)     transcriptional regulator, LacI family (xxxX) {Synechocystis sp}
1716.1  2.1      38 % (Q:100.6 %/S:100.6 %)     transcriptional regulator, LacI family (xxxX) {Thermotoga maritima}
2083.1  2.1      64 % (Q: 98.8 %/S: 99.7 %)     transcriptional regulator, LacI family (thuR) {Sinorhizobium meliloti}
2678.1  2.1      30 % (Q: 99.2 %/S: 99.2 %)     transcriptional regulator, LacI family (purR) {Sphingomonas sp}
2683.1  2.1      53 % (Q: 99.7 %/S: 99.4 %)     transcriptional regulator, LacI family (xxxX) {Streptomyces coelicolor A3(2)}
3766.1  2.1      37 % (Q: 99.4 %/S: 94.9 %)     transcriptional regulator, LacI family (xxxX) {Streptomyces coelicolor A3(2)}
3913.1  3.1      58 % (Q: 93.8 %/S:100.0 %)     transcriptional regulator, LacI family (xxxX) {Streptomyces coelicolor A3(2)}
3998.1  2.1      30 % (Q: 95.8 %/S: 97.4 %)     transcriptional regulator, LacI family (xxxX) {Streptomyces coelicolor A3(2)}
4048.1  2.1      43 % (Q: 95.5 %/S: 98.5 %)     transcriptional regulator, LacI family (thuR) {Sinorhizobium meliloti}
4533.1  2.1      32 % (Q: 98.2 %/S: 99.7 %)     transcriptional regulator, LacI family (xxxX) {Bacillus subtilis}
4574.1  2.1      32 % (Q: 95.5 %/S: 95.5 %)     transcriptional regulator, LacI family (xxxX) {Sphingomonas sp}
4738.1  2.1      48 % (Q: 51.8 %/S: 68.9 %)     transcriptional regulator, LacI family (xxxX) {Klebsiella pneumoniae}
4038.1  2.1      44 % (Q: 97.1 %/S: 98.5 %)     transcriptional repressor, LacI family (cytR) {Salmonella typhimurium}

12.99. REGULATORY FUNCTIONS/OTHER (201 genes)

1124.1  2.1      34 % (Q: 93.9 %/S: 48.5 %)     calcium-binding protein, regucalcin (xxxX) {Mesorhizobium loti}
1170.1  1.1      49 % (Q: 92.5 %/S: 94.1 %)     calcium-binding protein, regucalcin (xxxX) {Streptomyces coelicolor A3(2)}
3825.1  2.1      36 % (Q: 84.6 %/S: 43.6 %)     calcium-binding protein, regucalcin (xxxX) {Xenopus laevis}
4022.1  2.1      57 % (Q: 98.7 %/S: 97.4 %)     denitrification regulatory protein (nnrU) {Pseudomonas sp. G-179}
403.1   1.1      41 % (Q: 99.2 %/S: 84.4 %)     GGDEF family protein (xxxX) {Escherichia coli}
513.1   2.1      46 % (Q: 71.4 %/S: 61.5 %)     GGDEF family protein (xxxX) {Pseudomonas aeruginosa}
760.1   1.1      32 % (Q: 90.3 %/S: 77.1 %)     GGDEF family protein (xxxX) {Escherichia coli}
956.1   2.1      41 % (Q: 61.2 %/S: 64.7 %)     GGDEF family protein (xxxX) {Bacillus cereus}
978.1   1.1      49 % (Q: 97.6 %/S: 91.9 %)     GGDEF family protein (xxxX) {Deinococcus radiodurans}
1056.1  1.1      35 % (Q: 74.0 %/S: 41.6 %)     GGDEF family protein (xxxX) {Bacillus cereus}
1058.1  1.1      44 % (Q: 96.6 %/S: 91.1 %)     GGDEF family protein (xxxX) {Rhizobium sp. NGR234}
1171.1  1.1      56 % (Q: 96.7 %/S: 96.9 %)     GGDEF family protein (xxxX) {Deinococcus radiodurans (strain R1)}
1724.1  2.1      34 % (Q: 90.2 %/S: 90.1 %)     GGDEF family protein (xxxX) {Pseudomonas aeruginosa}
2135.1  1.1      34 % (Q: 52.3 %/S: 68.9 %)     GGDEF family protein (xxxX) {Escherichia coli}
2393.1  1.1      28 % (Q: 67.6 %/S: 48.5 %)     GGDEF family protein (xxxX) {Pseudomonas aeruginosa}
2832.1  1.1      44 % (Q: 49.6 %/S: 42.0 %)     GGDEF family protein (xxxX) {Pseudomonas aeruginosa}
3021.1  1.1      42 % (Q: 37.8 %/S: 46.2 %)     GGDEF family protein (xxxX) {Pseudomonas aeruginosa}
3072.1  2.1      36 % (Q: 37.1 %/S: 24.1 %)     GGDEF family protein (xxxX) {Deinococcus radiodurans}
3075.1  2.1      64 % (Q: 95.1 %/S: 91.1 %)     GGDEF family protein (xxxX) {Bacillus cereus}
3104.1  2.1      45 % (Q: 58.4 %/S: 60.3 %)     GGDEF family protein (xxxX) {Rhizobium sp. (strain NGR234)}
3392.1  2.1      41 % (Q:101.8 %/S: 98.0 %)     GGDEF family protein (xxxX) {Bacillus cereus}
4359.1  1.1      28 % (Q: 99.2 %/S: 93.8 %)     GGDEF family protein (xxxX) {Deinococcus radiodurans}
4474.1  2.1      37 % (Q: 62.6 %/S: 28.2 %)     GGDEF family protein (xxxX) {Pseudomonas aeruginosa}
4532.1  2.1      32 % (Q: 66.6 %/S: 40.4 %)     GGDEF family protein (xxxX) {Synechocystis sp}
1178.1  1.1      48 % (Q: 88.1 %/S: 99.2 %)     inositol monophosphatase family protein (xxxX) {Deinococcus radiodurans}
1751.1  1.1      55 % (Q: 96.0 %/S: 95.6 %)     inositol monophosphatase family protein (xxxX) {Streptomyces griseus subsp. griseus}
1752.1  1.1      51 % (Q: 99.6 %/S: 99.6 %)     inositol monophosphatase family protein (xxxX) {Streptomyces griseus subsp. griseus}
2663.1  2.1      32 % (Q: 84.7 %/S: 83.7 %)     inositol monophosphatase family protein (xxxX) {Rhizobium sp. NGR234}
3690.1  2.1      54 % (Q: 95.4 %/S: 95.1 %)     inositol monophosphatase family protein (xxxX) {Rhizobium rhizogenes}
4699.1  2.1      44 % (Q: 93.7 %/S: 95.5 %)     inositol monophosphatase family protein (xxxX) {Streptomyces spectabilis}
2956.1  4.1      89 % (Q: 70.7 %/S: 37.2 %)     quorum sensing TraR agonist (trlR) {Agrobacterium tumefaciens}
4078.1  2.1      30 % (Q: 45.9 %/S: 95.6 %)     serine/threonine phosphoprotein phosphatase (xxxX) {Pseudomonas aeruginosa (strain PAO1)}
2527.1  2.1      43 % (Q: 91.6 %/S: 89.6 %)     serine/threonine protein phosphatase I (prp1) {Fervidobacterium islandicum}
3455.1  1.1      62 % (Q: 97.1 %/S: 97.5 %)     transcriptional activator, Crp family (fnrN) {Rhizobium leguminosarum biovar viciae}
819.1   1.1      50 % (Q: 98.7 %/S:100.0 %)     transcriptional regulator, ArsR family (xxxX) {Bacillus halodurans}
1155.1  2.1      74 % (Q: 81.9 %/S: 83.3 %)     transcriptional regulator, ArsR family (xxxX) {Xylella fastidiosa}
1602.1  3.1      44 % (Q: 59.6 %/S: 56.2 %)     transcriptional regulator, ArsR family (xxxX) {Streptomyces coelicolor A3(2)}
1915.1  1.1      52 % (Q: 94.0 %/S:100.0 %)     transcriptional regulator, ArsR family (xxxX) {Acidithiobacillus ferrooxidans}
2138.1  1.1      37 % (Q: 93.3 %/S: 93.3 %)     transcriptional regulator, ArsR family (xxxX) {Bacillus subtilis}
2787.1  1.1      59 % (Q: 95.8 %/S: 95.0 %)     transcriptional regulator, ArsR family (xxxX) {Xylella fastidiosa}
2840.1  1.1      96 % (Q: 61.5 %/S: 77.6 %)     transcriptional regulator, ArsR family (xxxX) {Agrobacterium radiobacter}
2902.1  3.1      49 % (Q: 89.1 %/S: 97.2 %)     transcriptional regulator, ArsR family (xxxX) {Pseudomonas stutzeri}
2996.1  1.1      48 % (Q: 86.1 %/S: 92.1 %)     transcriptional regulator, ArsR family (xxxX) {Streptomyces coelicolor A3(2)}
3002.1  1.1      51 % (Q: 79.8 %/S: 81.8 %)     transcriptional regulator, ArsR family (xxxX) {Streptomyces coelicolor A3(2)}
3207.1  1.1      72 % (Q:100.0 %/S:101.0 %)     transcriptional regulator, ArsR family (nolR) {Rhizobium leguminosarum}
3477.1  1.1      63 % (Q: 90.4 %/S:100.0 %)     transcriptional regulator, ArsR family (xxxX) {Mycobacterium}
4493.1  2.1      49 % (Q: 92.9 %/S: 94.6 %)     transcriptional regulator, ArsR family (xxxX) {Streptomyces coelicolor A3(2)}
706.1   1.1      63 % (Q: 98.6 %/S: 99.3 %)     transcriptional regulator, AsnC family (xxxX) {Streptomyces coelicolor A3(2)}
1146.1  2.1      52 % (Q: 95.5 %/S: 98.0 %)     transcriptional regulator, AsnC family (xxxX) {Pseudomonas aeruginosa}
1315.1  1.1      36 % (Q: 98.7 %/S: 87.6 %)     transcriptional regulator, AsnC family (xxxX) {Rhizobium sp. NGR234}
1851.1  2.1      91 % (Q: 90.7 %/S: 98.7 %)     transcriptional regulator, AsnC family (lrp) {Klebsiella aerogenes}
2058.1  1.1      87 % (Q: 95.7 %/S: 95.1 %)     transcriptional regulator, AsnC family (xxxX) {Escherichia coli}
2437.1  2.1      75 % (Q:100.0 %/S: 86.8 %)     transcriptional regulator, AsnC family (xxxX) {Rhodobacter capsulatus}
2837.1  1.1      81 % (Q: 98.1 %/S: 97.4 %)     transcriptional regulator, AsnC family (lrp) {Sinorhizobium meliloti}
3627.1  2.1      71 % (Q:100.0 %/S:100.0 %)     transcriptional regulator, AsnC family (lrp) {Pseudomonas aeruginosa}
4154.1  2.1      75 % (Q:100.0 %/S:100.0 %)     transcriptional regulator, AsnC family (xxxX) {Zymomonas mobilis}
4218.1  2.1      96 % (Q:100.0 %/S:100.0 %)     transcriptional regulator, AsnC family (putR) {Agrobacterium tumefaciens}
4672.1  2.1      66 % (Q: 87.2 %/S: 88.2 %)     transcriptional regulator, AsnC family (lrp) {Pseudomonas aeruginosa}
4718.1  2.1      84 % (Q: 98.1 %/S: 89.9 %)     transcriptional regulator, AsnC family (xxxX) {Rhizobium sp}
3307.1  1.1      81 % (Q:100.0 %/S: 97.9 %)     transcriptional regulator, CarD family (xxxX) {Sinorhizobium meliloti}
255.1   3.1      41 % (Q: 98.8 %/S: 96.2 %)     transcriptional regulator, DeoR family (xxxX) {Vibrio cholerae}
1136.1  2.1      67 % (Q: 93.8 %/S: 97.0 %)     transcriptional regulator, DeoR family (xxxX) {Vibrio cholerae}
3275.1  1.1      35 % (Q: 93.6 %/S: 98.0 %)     transcriptional regulator, DeoR family (xxxX) {Streptomyces coelicolor}
3703.1  2.1      78 % (Q: 98.1 %/S: 98.8 %)     transcriptional regulator, DeoR family (glpR) {Pseudomonas tolaasii}
4656.1  2.1      45 % (Q: 93.4 %/S: 91.9 %)     transcriptional regulator, DeoR family (deoR) {Escherichia coli}
349.1   2.1      55 % (Q: 92.9 %/S: 92.5 %)     transcriptional regulator, FadR/GntR family (xxxX) {Rhizobium etli}
561.1   1.1      70 % (Q: 93.5 %/S: 90.9 %)     transcriptional regulator, Fur family (irr) {Bradyrhizobium japonicum}
1271.1  1.1      58 % (Q: 94.2 %/S: 82.7 %)     transcriptional regulator, Fur family (zur) {Mesorhizobium loti}
208.1   2.1      32 % (Q: 83.8 %/S: 83.8 %)     transcriptional regulator, GntR family (xxxX) {Streptomyces coelicolor A3-2}
278.1   3.1      41 % (Q: 87.1 %/S: 86.1 %)     transcriptional regulator, GntR family (xxxX) {Pseudomonas aeruginosa}
288.1   1.1      54 % (Q: 94.7 %/S: 94.3 %)     transcriptional regulator, GntR family (hutC) {Vibrio cholerae}
344.1   2.1      55 % (Q: 98.8 %/S: 97.2 %)     transcriptional regulator, GntR family (hutC) {Pseudomonas aeruginosa (strain PAO1)}
917.1   2.1      40 % (Q: 95.4 %/S: 87.3 %)     transcriptional regulator, GntR family (xxxX) {Mesorhizobium loti}
966.1   2.1      43 % (Q: 97.3 %/S: 84.6 %)     transcriptional regulator, GntR family (xxxX) {Pseudomonas aeruginosa}
1123.1  2.1      45 % (Q: 93.2 %/S: 90.9 %)     transcriptional regulator, GntR family (xxxX) {Pseudomonas aeruginosa}
1125.1  2.1      35 % (Q: 91.8 %/S: 92.6 %)     transcriptional regulator, GntR family {}
1161.1  2.1      43 % (Q: 95.0 %/S: 90.6 %)     transcriptional regulator, GntR family (xxxX) {Bacillus subtilis}
1211.1  2.1      58 % (Q: 96.8 %/S: 97.6 %)     transcriptional regulator, GntR family (xxxX) {Pseudomonas putida}
1281.1  1.1      37 % (Q: 94.0 %/S: 89.0 %)     transcriptional regulator, GntR family (xxxX) {Caulobacter crescentus}
1341.1  1.1      35 % (Q: 96.6 %/S: 90.5 %)     transcriptional regulator, GntR family (xxxX) {Streptomyces coelicolor}
1359.1  1.1      31 % (Q: 79.3 %/S: 86.5 %)     transcriptional regulator, GntR family (xxxX) {Bacillus halodurans}
1373.1  1.1      42 % (Q: 84.8 %/S: 87.3 %)     transcriptional regulator, GntR family (xxxX) {Pseudomonas putida}
1649.1  1.1      57 % (Q: 98.1 %/S: 94.4 %)     transcriptional regulator, GntR family (xxxX) {Rhodobacter capsulatus}
1745.1  1.1      57 % (Q: 99.6 %/S:100.0 %)     transcriptional regulator, GntR family (xxxX) {Pseudomonas aeruginosa}
1874.1  1.1      70 % (Q: 96.0 %/S: 97.7 %)     transcriptional regulator, GntR family (xxxX) {Pseudomonas aeruginosa}
1984.1  1.1      39 % (Q: 95.2 %/S: 88.0 %)     transcriptional regulator, GntR family (xxxX) {Escherichia coli}
2301.1  3.1      36 % (Q: 83.4 %/S: 88.8 %)     transcriptional regulator, GntR family (xxxX) {Thermoplasma acidophilum}
2481.1  2.1      67 % (Q: 99.2 %/S: 92.9 %)     transcriptional regulator, GntR family (xxxX) {Pseudomonas aeruginosa}
2495.1  2.1      32 % (Q: 68.8 %/S: 57.7 %)     transcriptional regulator, GntR family (xxxX) {Deinococcus radiodurans}
2519.1  2.1      33 % (Q: 85.5 %/S: 93.0 %)     transcriptional regulator, GntR family (xxxX) {Escherichia coli K12}
3089.1  2.1      39 % (Q: 92.6 %/S: 85.9 %)     transcriptional regulator, GntR family (xxxX) {Streptomyces aureofaciens}
3111.1  2.1      39 % (Q: 88.7 %/S: 84.7 %)     transcriptional regulator, GntR family (exuR) {Escherichia coli}
3165.1  1.1      31 % (Q: 94.5 %/S: 90.4 %)     transcriptional regulator, GntR family (xxxX) {Thermotoga maritima}
3287.1  1.1      57 % (Q: 97.9 %/S:100.0 %)     transcriptional regulator, GntR family (xxxX) {Haemophilus influenzae Rd}
3353.1  2.1      32 % (Q: 84.5 %/S: 81.0 %)     transcriptional regulator, GntR family (xxxX) {Pseudomonas aeruginosa}
3396.1  2.1      41 % (Q: 99.2 %/S: 92.5 %)     transcriptional regulator, GntR family (xxxX) {Bacillus halodurans}
3532.1  1.1      60 % (Q: 95.3 %/S:100.0 %)     transcriptional regulator, GntR family (xxxX) {Bacillus subtilis}
3564.1  1.1      71 % (Q: 98.5 %/S: 96.4 %)     transcriptional regulator, GntR family (xxxX) {Deinococcus radiodurans}
3614.1  1.1      55 % (Q: 95.9 %/S: 94.4 %)     transcriptional regulator, GntR family (xxxX) {Sinorhizobium meliloti}
3635.1  2.1      55 % (Q: 96.3 %/S: 94.2 %)     transcriptional regulator, GntR family (xxxX) {Escherichia coli K12}
3713.1  2.1      41 % (Q: 89.6 %/S: 89.6 %)     transcriptional regulator, GntR family (xxxX) {Streptomyces coelicolor A3(2)}
3754.1  2.1      34 % (Q: 98.9 %/S: 98.9 %)     transcriptional regulator, GntR family (xxxX) {Rhodobacter sphaeroides}
3786.1  2.1      80 % (Q: 45.9 %/S: 97.2 %)     transcriptional regulator, GntR family (xxxX) {Deinococcus radiodurans}
3824.1  2.1      31 % (Q: 93.0 %/S: 97.0 %)     transcriptional regulator, GntR family (xxxX) {Bacillus halodurans}
3915.1  3.1      34 % (Q: 89.7 %/S: 90.1 %)     transcriptional regulator, GntR family (pdhR) {Bacillus subtilis}
4184.1  2.1      28 % (Q: 93.8 %/S: 97.2 %)     transcriptional regulator, GntR family (xxxX) {Streptomyces coelicolor A3(2)}
4287.1  1.1      57 % (Q:101.6 %/S: 97.7 %)     transcriptional regulator, GntR family (xxxX) {Pseudomonas aeruginosa}
4498.1  2.1      35 % (Q: 87.3 %/S: 89.6 %)     transcriptional regulator, GntR family (xxxX) {Bacillus halodurans}
4605.1  2.1      45 % (Q: 92.7 %/S: 89.4 %)     transcriptional regulator, GntR family (xxxX) {Mesorhizobium loti}
4721.1  2.1      36 % (Q: 91.7 %/S: 95.9 %)     transcriptional regulator, GntR family (xxxX) {Pseudomonas aeruginosa}
1166.1  1.1      37 % (Q: 90.0 %/S: 98.8 %)     transcriptional regulator, IclR family (kdgR) {e. coli}
2510.1  2.1      33 % (Q: 94.5 %/S: 91.7 %)     transcriptional regulator, IclR family (xxxX) {Brucella abortus}
2687.1  2.1      43 % (Q: 97.6 %/S: 84.9 %)     transcriptional regulator, IclR family (pcaR) {Pseudomonas putida}
3421.1  2.1      36 % (Q: 96.1 %/S: 95.0 %)     transcriptional regulator, IclR family (xxxX) {Pseudomonas aeruginosa}
4668.1  2.1      31 % (Q: 85.4 %/S: 91.4 %)     transcriptional regulator, IclR family (xxxX) {Halobacterium sp}
1924.1  3.1      65 % (Q: 98.8 %/S: 97.2 %)     transcriptional regulator, IclR family/regucalcin (xxxX) {Streptomyces coelicolor A3(2)}
2484.1  2.1      71 % (Q: 97.4 %/S: 96.1 %)     transcriptional regulator, Lrp family (xxxX) {Rhizobium leguminosarum bv. viciae}
4244.1  1.1      50 % (Q:100.0 %/S:100.0 %)     transcriptional regulator, Lrp family (xxxX) {Pyrococcus abyssi (strain Orsay)}
207.1   2.1      48 % (Q: 99.0 %/S: 98.2 %)     transcriptional regulator, LuxR family (xxxX) {Pseudomonas aeruginosa}
321.1   1.1      41 % (Q: 40.1 %/S: 14.8 %)     transcriptional regulator, LuxR family (xxxX) {Synechocystis sp. PCC 6803}
619.1   1.1      45 % (Q: 59.7 %/S: 46.9 %)     transcriptional regulator, LuxR family (xxxX) {Mesorhizobium loti}
1789.1  1.1      50 % (Q: 98.4 %/S: 98.8 %)     transcriptional regulator, LuxR family (agrR) {Sinorhizobium meliloti}
1790.1  1.1      57 % (Q: 92.6 %/S: 91.8 %)     transcriptional regulator, LuxR family (luxR) {Sinorhizobium meliloti}
2066.1  2.1      28 % (Q: 85.3 %/S: 99.6 %)     transcriptional regulator, LuxR family (xxxX) {Brucella melitensis}
3213.1  1.1      32 % (Q: 88.7 %/S: 82.4 %)     transcriptional regulator, LuxR family (ahyR) {Aeromonas hydrophila}
3277.1  1.1      29 % (Q: 99.6 %/S:100.4 %)     transcriptional regulator, LuxR family (xxxX) {Aeromonas hydrophila}
4693.1  2.1      46 % (Q:100.0 %/S: 79.6 %)     transcriptional regulator, LuxR family (bme13) {Brucella melitensis}
199.1   1.1      40 % (Q: 92.6 %/S: 92.6 %)     transcriptional regulator, MarR family (xxxX) {Mycobacterium tuberculosis}
391.1   1.1      36 % (Q: 93.4 %/S: 97.9 %)     transcriptional regulator, MarR family (slyA) {Salmonella choleraesuis serovar Choleraesuis}
419.1   2.1      44 % (Q: 74.0 %/S: 79.1 %)     transcriptional regulator, MarR family (xxxX) {Burkholderia pseudomallei}
488.1   1.1      49 % (Q: 92.1 %/S: 96.6 %)     transcriptional regulator, MarR family (xxxX) {Acinetobacter sp. ADP1}
498.1   1.1      37 % (Q:101.2 %/S: 81.6 %)     transcriptional regulator, MarR family (xxxX) {Streptomyces coelicolor}
841.1   1.1      50 % (Q: 93.9 %/S: 97.2 %)     transcriptional regulator, MarR family (xxxX) {Methanothermobacter thermoautotrophicus}
945.1   1.1      65 % (Q: 84.8 %/S: 86.4 %)     transcriptional regulator, MarR family (petP) {Rhodobacter capsulatus}
991.1   1.1      35 % (Q: 51.0 %/S: 51.3 %)     transcriptional regulator, MarR family (xxxX) {Streptomyces coelicolor}
1376.1  1.1      29 % (Q: 80.5 %/S: 77.1 %)     transcriptional regulator, MarR family (xxxX) {Thauera aromatica}
1574.1  3.1      85 % (Q:100.0 %/S:100.0 %)     transcriptional regulator, MarR family (xxxX) {Acinetobacter sp. ADP1}
2870.1  3.1      51 % (Q: 91.2 %/S: 87.6 %)     transcriptional regulator, MarR family (xxxX) {Pseudomonas aeruginosa}
3062.1  2.1      45 % (Q: 97.0 %/S: 86.6 %)     transcriptional regulator, MarR family (xxxX) {Pseudomonas aeruginosa}
3192.1  1.1      27 % (Q: 97.9 %/S: 91.5 %)     transcriptional regulator, MarR family (xxxX) {Acinetobacter sp. ADP1}
3271.1  1.1      32 % (Q: 92.9 %/S: 94.0 %)     transcriptional regulator, MarR family (xxxX) {Thauera aromatica}
3531.1  1.1      51 % (Q: 97.5 %/S: 95.7 %)     transcriptional regulator, MarR family (pecS) {Pectobacterium chrysanthemi}
3842.1  3.1     100 % (Q:100.0 %/S:100.0 %)     transcriptional regulator, MarR family (atsB) {Agrobacterium tumefaciens}
3926.1  3.1      49 % (Q: 98.0 %/S: 96.1 %)     transcriptional regulator, MarR family (xxxX) {Pseudomonas aeruginosa}
4336.1  1.1      31 % (Q: 93.4 %/S: 99.3 %)     transcriptional regulator, MarR family (xxxX) {Sphingomonas aromaticivorans plasmid pNL1}
4525.1  2.1      28 % (Q: 82.0 %/S: 79.5 %)     transcriptional regulator, MarR family (xxxX) {Thauera aromatica}
4637.1  2.1      48 % (Q: 92.7 %/S: 90.8 %)     transcriptional regulator, MarR family (xxxX) {Acinetobacter sp. ADP1}
335.1   2.1      58 % (Q: 92.1 %/S: 70.9 %)     transcriptional regulator, MerR family (soxR) {Pseudomonas aeruginosa}
714.1   1.1      62 % (Q: 99.3 %/S: 94.6 %)     transcriptional regulator, MerR family (cueR) {Sinorhizobium meliloti}
987.1   1.1      55 % (Q: 78.4 %/S: 86.4 %)     transcriptional regulator, MerR family (cueR) {Sinorhizobium meliloti}
1248.1  1.1      71 % (Q:100.0 %/S:100.0 %)     transcriptional regulator, MerR family (xxxX) {Pseudomonas aeruginosa}
1400.1  1.1      65 % (Q: 97.2 %/S: 98.6 %)     transcriptional regulator, MerR family (xxxX) {Haemophilus influenzae}
1590.1  3.1      34 % (Q: 80.3 %/S: 79.1 %)     transcriptional regulator, MerR family (xxxX) {Streptomyces coelicolor A3(2)}
4384.1  2.1      33 % (Q: 35.2 %/S: 49.8 %)     transcriptional regulator, MerR family (xxxX) {Bacillus halodurans}
1061.1  1.1      71 % (Q: 96.3 %/S: 96.6 %)     transcriptional regulator, ROK family (frcR) {Sinorhizobium meliloti}
2660.1  2.1      31 % (Q:100.0 %/S: 96.2 %)     transcriptional regulator, ROK family {}
2669.1  2.1      35 % (Q: 96.3 %/S: 95.8 %)     transcriptional regulator, ROK family (xxxX) {Sinorhizobium meliloti}
3100.1  2.1      26 % (Q: 90.5 %/S: 90.5 %)     transcriptional regulator, ROK family (xxxX) {Anaerocellum thermophilum}
3368.1  2.1      36 % (Q: 93.7 %/S: 99.2 %)     transcriptional regulator, ROK family (xylR) {Streptomyces coelicolor A3(2)}
3810.1  2.1      29 % (Q: 95.0 %/S: 94.5 %)     transcriptional regulator, ROK family (xxxX) {Sinorhizobium meliloti}
4290.1  1.1      33 % (Q: 97.4 %/S: 98.7 %)     transcriptional regulator, ROK family (xxxX) {Vibrio cholerae}
4508.1  2.1      37 % (Q: 91.2 %/S: 41.8 %)     transcriptional regulator, ROK family (xxxX) {Rhodococcus opacus}
1695.1  2.1      28 % (Q: 47.7 %/S: 46.5 %)     transcriptional regulator, RpiR family (xxxX) {Bacillus halodurans}
2716.1  2.1      40 % (Q: 98.5 %/S: 95.0 %)     transcriptional regulator, RpiR family (xxxX) {Bacillus halodurans}
2805.1  1.1      36 % (Q: 93.8 %/S: 99.6 %)     transcriptional regulator, RpiR family (xxxX) {Pseudomonas aeruginosa}
3927.1  3.1      31 % (Q: 93.5 %/S: 97.5 %)     transcriptional regulator, RpiR family (xxxX) {Bacillus subtilis}
4280.1  1.1      39 % (Q:100.3 %/S: 98.3 %)     transcriptional regulator, RpiR family (xxxX) {Pseudomonas aeruginosa}
186.1   1.1      68 % (Q: 98.5 %/S:100.0 %)     transcriptional regulator, TetR family (xxxX) {Sinorhizobium meliloti}
307.1   1.1      59 % (Q: 97.5 %/S: 88.1 %)     transcriptional regulator, TetR family {}
345.1   2.1      26 % (Q: 69.6 %/S: 79.3 %)     transcriptional regulator, TetR family (xxxX) {Aquifex aeolicus}
801.1   1.1      33 % (Q: 97.7 %/S: 98.1 %)     transcriptional regulator, TetR family (xxxX) {Pseudomonas aeruginosa}
884.1   1.1      25 % (Q: 87.5 %/S: 92.4 %)     transcriptional regulator, TetR family (xxxX) {Pseudomonas aeruginosa}
1098.1  1.1      74 % (Q: 95.3 %/S: 96.2 %)     transcriptional regulator, TetR family (xxxX) {Escherichia coli}
1553.1  3.1      30 % (Q: 93.0 %/S:100.0 %)     transcriptional regulator, TetR family (xxxX) {Pseudomonas aeruginosa}
1556.1  3.1      59 % (Q: 93.0 %/S: 99.5 %)     transcriptional regulator, TetR family (xxxX) {Xylella fastidiosa}
1712.1  2.1      42 % (Q:100.4 %/S: 93.9 %)     transcriptional regulator, TetR family (xxxX) {Pseudomonas aeruginosa}
1942.1  3.1      39 % (Q:100.0 %/S: 97.8 %)     transcriptional regulator, TetR family (xxxX) {Pseudomonas aeruginosa}
2309.1  3.1      59 % (Q: 92.8 %/S: 87.8 %)     transcriptional regulator, TetR family (xxxX) {Streptomyces coelicolor A3(2)}
2703.1  2.1      48 % (Q: 87.4 %/S: 90.5 %)     transcriptional regulator, TetR family (xxxX) {Pseudomonas aeruginosa}
2797.1  1.1      38 % (Q: 86.7 %/S: 99.5 %)     transcriptional regulator, TetR family (xxxX) {Streptomyces coelicolor A3(2)}
2881.1  3.1      30 % (Q: 98.1 %/S: 95.3 %)     transcriptional regulator, TetR family (xxxX) {Streptomyces coelicolor A3(2)}
2883.1  3.1      37 % (Q: 84.6 %/S: 93.5 %)     transcriptional regulator, TetR family (xxxX) {Pseudomonas aeruginosa}
2885.1  3.1      43 % (Q: 85.6 %/S: 56.9 %)     transcriptional regulator, TetR family (xxxX) {Streptomyces coelicolor A3(2)}
3010.1  1.1      46 % (Q: 93.5 %/S: 93.5 %)     transcriptional regulator, TetR family (xxxX) {Pseudomonas aeruginosa}
3069.1  2.1      32 % (Q: 98.6 %/S: 96.2 %)     transcriptional regulator, TetR family (acrR) {Pseudomonas aeruginosa}
3196.1  1.1      38 % (Q: 92.2 %/S: 86.8 %)     transcriptional regulator, TetR family (xxxX) {Aquifex aeolicus}
3242.1  1.1      29 % (Q: 95.4 %/S: 98.9 %)     transcriptional regulator, TetR family (xxxX) {Synechocystis sp}
3433.1  1.1      33 % (Q: 95.0 %/S: 97.2 %)     transcriptional regulator, TetR family (phaD) {Pseudomonas aeruginosa}
3473.1  1.1      30 % (Q: 91.8 %/S: 94.8 %)     transcriptional regulator, TetR family (xxxX) {Pseudomonas aeruginosa}
3525.1  1.1      58 % (Q: 99.0 %/S: 97.4 %)     transcriptional regulator, TetR family (xxxX) {Vogesella indigofera}
3801.1  2.1      67 % (Q:100.0 %/S: 97.5 %)     transcriptional regulator, TetR family (xxxX) {Streptomyces coelicolor}
3812.1  2.1     100 % (Q:100.0 %/S:100.0 %)     transcriptional regulator, TetR family (tetR) {Agrobacterium tumefaciens}
3817.1  2.1      46 % (Q:101.1 %/S:100.0 %)     transcriptional regulator, TetR family (xxxX) {Streptomyces coelicolor A3(2)}
4091.1  2.1      67 % (Q: 97.9 %/S: 92.1 %)     transcriptional regulator, TetR family (xxxX) {Pseudomonas aeruginosa}
4237.1  1.1     100 % (Q:100.0 %/S:100.0 %)     transcriptional regulator, TetR family (ameR) {Agrobacterium tumefaciens A348}
4546.1  2.1      45 % (Q: 90.2 %/S: 98.5 %)     transcriptional regulator, TetR family (xxxX) {Pseudomonas aeruginosa}
4579.1  2.1      45 % (Q: 87.1 %/S: 92.2 %)     transcriptional regulator, TetR family (xxxX) {Pseudomonas aeruginosa}
4631.1  2.1      37 % (Q: 55.3 %/S: 52.8 %)     transcriptional regulator, TetR family (xxxX) {Streptomyces coelicolor}
15003.1 2.1      41 % (Q: 97.4 %/S: 91.1 %)     transcriptional regulator, TetR family {}
4031.1  2.1      81 % (Q: 91.0 %/S: 98.6 %)     transcriptional regulatory, Crp family (nnrR) {Pseudomonas sp. G-179}
2893.1  3.1      33 % (Q:103.2 %/S: 97.9 %)     transmembrane sensor (xxxX) {Pseudomonas aeruginosa}

13.1. CELL ENVELOPE/LIPOPROTEINS (8 genes)

1282.1  1.1      64 % (Q:100.0 %/S:100.6 %)     lipoprotein (xxxX) {Rhodobacter capsulatus}
2636.1  1.1      48 % (Q:103.2 %/S:108.2 %)     lipoprotein (xxxX) {Sinorhizobium meliloti}
311.1   1.1      64 % (Q: 97.6 %/S:100.0 %)     membrane lipoprotein (xxxX) {Deinococcus radiodurans}
1723.1  2.1      50 % (Q:100.8 %/S:100.4 %)     outer membrane lipoprotein (xxxX) {Campylobacter jejuni}
4476.1  2.1      51 % (Q: 98.4 %/S: 93.1 %)     outer membrane lipoprotein (xxxX) {Brucella abortus}
4658.1  2.1      38 % (Q: 92.0 %/S: 95.9 %)     outer membrane lipoprotein (xxxX) {Pseudomonas aeruginosa}
1906.1  1.1      51 % (Q: 76.4 %/S: 71.5 %)     rare lipoprotein A (rlpA) {Pseudomonas aeruginosa}
3515.1  1.1      58 % (Q: 96.7 %/S: 96.7 %)     rare lipoprotein A (xxxX) {Synechocystis sp}

13.2. CELL ENVELOPE/SURFACE STRUCTURES (23 genes)

1569.1  3.1      26 % (Q:103.5 %/S: 44.1 %)     autotransporter protein (yapE) {Yersinia pestis}
3575.1  1.1      56 % (Q: 90.5 %/S:101.3 %)     component of type IV pilus (ctpD) {Caulobacter crescentus}
3578.1  1.1      76 % (Q:102.0 %/S: 99.8 %)     component of type IV pilus (ctpG) {Caulobacter crescentus}
3574.1  1.1      48 % (Q:100.4 %/S: 99.3 %)     components of type IV pilus (ctpC) {Caulobacter crescentus}
3576.1  1.1      45 % (Q: 84.4 %/S: 84.1 %)     components of type IV pilus (ctpE) {Caulobacter crescentus}
3577.1  1.1      61 % (Q: 61.4 %/S: 99.0 %)     components of type IV pilus (ctpF) {Caulobacter crescentus}
3579.1  1.1      55 % (Q:100.0 %/S: 99.1 %)     components of type IV pilus (ctpH) {Caulobacter crescentus}
3580.1  1.1      58 % (Q: 99.1 %/S: 95.9 %)     components of type IV pilus (ctpI) {Actinobacillus actinomycetemcomitans}
3572.1  1.1      62 % (Q: 88.9 %/S: 96.6 %)     components of type IV pilus, pilin subunit (ctpA) {Caulobacter crescentus}
3573.1  1.1      44 % (Q:100.0 %/S: 97.1 %)     components of type IV pilus, prepilin peptidase (ctpB) {xxxx}
6077.1  2.1      53 % (Q: 69.0 %/S: 87.5 %)     fimbriae associated protein (pilA) {Mesorhizobium loti}
4747.1  2.1      43 % (Q: 99.2 %/S: 86.8 %)     fimbrial chaperone (xxxX) {E coli}
4748.1  2.1      44 % (Q: 98.9 %/S: 99.5 %)     fimbrial usher protein (xxxX) {Escherichia coli}
726.1   1.1      51 % (Q:102.7 %/S:100.1 %)     group 1 outer membrane protein precursor (omp1) {Brucella abortus}
475.1   1.1      63 % (Q: 91.5 %/S: 93.5 %)     lipA protein (lipA) {Rhizobium leguminosarum}
4429.1  2.1      76 % (Q: 93.2 %/S: 98.2 %)     omp16 protein (palA) {Brucella abortus}
817.1   1.1      52 % (Q: 82.7 %/S: 79.3 %)     outer membrane protein (xxxX) {Coxiella burnetii}
2379.1  1.1      59 % (Q:100.9 %/S:104.3 %)     outer membrane protein (ropB) {Rhizobium leguminosarum viciae}
2817.1  1.1      37 % (Q:102.4 %/S:100.5 %)     outer membrane protein (omp) {Brucella suis}
3060.1  2.1      70 % (Q: 96.5 %/S: 96.1 %)     outer membrane protein (xxxX) {Rhizobium sp. NGR234}
3193.1  1.1      51 % (Q:100.5 %/S:102.4 %)     outer membrane protein (xxxX) {Brucella canis}
4424.1  2.1      43 % (Q: 99.3 %/S:100.7 %)     outer surface protein (xxxX) {Escherichia coli}
2819.1  1.1      51 % (Q: 98.4 %/S: 97.2 %)     periplasmic immunogenic protein (pp26) {Brucella melitensis}

13.3. CELL ENVELOPE/BIOSYNTHESIS OF MUREIN SACCULUS AND PEPTIDOGLYCAN (30 genes)

723.1   1.1      45 % (Q:100.4 %/S: 96.1 %)     acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase (lpxA) {Brucella abortus}
395.1   1.1      43 % (Q: 93.9 %/S:100.8 %)     alanine racemase (alr) {Rhizobium leguminosarum bv. viciae}
2483.1  2.1      61 % (Q: 90.7 %/S: 99.4 %)     alanine racemase (alr) {Rhizobium leguminosarum bv. viciae}
762.1   1.1      77 % (Q:100.0 %/S:100.0 %)     D-alanine:D-alanine ligase (ddl) {Zymomonas mobilis}
3243.1  1.1      39 % (Q:107.4 %/S: 95.5 %)     D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) (xxxX) {Rickettsia prowazekii}
2621.1  1.1      73 % (Q: 99.6 %/S: 98.1 %)     exopolysaccharide production negative regulator (exoR) {Sinorhizobium meliloti}
1760.1  1.1      68 % (Q: 94.9 %/S: 93.8 %)     glutamate racemase (murI) {Escherichia coli}
868.1   1.1      62 % (Q: 84.4 %/S: 94.1 %)     monofunctional biosynthesis peptidoglycan transglycosylase (mtgA) {Brucella abortus}
721.1   1.1      59 % (Q: 91.5 %/S: 96.7 %)     penicillin binding protein {}
1907.1  1.1      49 % (Q: 91.8 %/S: 92.3 %)     penicillin binding protein (dac) {Pseudomonas aeruginosa}
4413.1  2.1      60 % (Q:100.0 %/S: 97.8 %)     penicillin binding protein (pbpC) {Xylella fastidiosa}
751.1   1.1      57 % (Q: 94.8 %/S: 96.7 %)     penicillin binding protein 2 (xxxX) {Rickettsia prowazekii}
225.1   1.1      53 % (Q: 98.4 %/S: 98.9 %)     penicillin-binding protein (pbpB) {Zymomonas mobilis}
837.1   1.1      58 % (Q:100.0 %/S:101.2 %)     penicillin-binding protein (pbpC) {Synechocystis sp}
1903.1  1.1      48 % (Q: 96.4 %/S: 99.2 %)     penicillin-binding protein (dac) {Rickettsia prowazekii}
124.1   1.1      66 % (Q:100.5 %/S:100.1 %)     penicillin-binding protein 1a (mrcA) {Rickettsia prowazekii}
3610.1  1.1      59 % (Q: 88.0 %/S: 96.6 %)     penicillin-insensitive murein endopeptidase (mepA) {Brucella abortus}
871.1   1.1      83 % (Q: 98.6 %/S: 98.3 %)     peptidoglycan acetylation protein (gcpE) {Xylella fastidiosa}
754.1   1.1      84 % (Q:100.0 %/S:100.0 %)     phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) {Sinorhizobium meliloti}
750.1   1.1      64 % (Q: 97.9 %/S: 98.8 %)     SAM-dependent methytransferase (mraW) {Caulobacter crescentus}
1682.1  1.1      52 % (Q: 97.5 %/S: 98.4 %)     soluble lytic transglycosylase (xxxX) {Bradyrhizobium japonicum}
2267.1  1.1      27 % (Q: 96.4 %/S: 82.4 %)     teichoic acid biosynthesis protein (tagA) {Thermoanaerobacter thermohydrosulfuricus}
725.1   1.1      48 % (Q: 97.7 %/S: 98.9 %)     UDP glucosamine N-acyltransferase (lpxD) {Brucella abortus}
753.1   1.1      55 % (Q: 99.6 %/S: 99.6 %)     UDP-MurNAc-pentapeptide synthetase (murF) {Zymomonas mobilis}
759.1   1.1      72 % (Q: 98.1 %/S: 98.4 %)     UDP-N-acetylenolpyruvoylglucosamine reductase (murB) {Zymomonas mobilis}
1779.1  1.1      77 % (Q: 99.8 %/S: 99.8 %)     UDP-N-acetylglucosamine (murA) {Xylella fastidiosa}
757.1   1.1      62 % (Q: 98.1 %/S: 98.9 %)     UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (murG) {Zymomonas mobilis}
758.1   1.1      79 % (Q: 98.3 %/S: 99.4 %)     UDP-N-acetylmuramate-alanine ligase (murC) {Zymomonas mobilis}
755.1   1.1      80 % (Q: 98.7 %/S:100.0 %)     UDP-N-acetylmuramoylalanine--D-glutamate ligase (murD) {Rhizobium meliloti}
752.1   1.1      68 % (Q: 99.4 %/S:100.4 %)     UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase (murE) {Zymomonas mobilis}

13.4. CELL ENVELOPE/BIOSYNTHESIS OF SURFACE POLYSACCHARIDES AND LIPOPOLYSACCHARIDES (95 genes)

1377.1  1.1      73 % (Q: 99.6 %/S: 97.9 %)     2-dehydro-3-deoxyphosphooctonate aldolase (kdsA) {Rickettsia prowazekii}
1176.1  1.1      61 % (Q: 98.4 %/S: 98.9 %)     3-deoxy-D-manno-octulosonic acid transferase-like protein (kdtA) {Arabidopsis thaliana}
834.1   1.1      74 % (Q: 94.8 %/S: 98.3 %)     3-deoxy-manno-octulosonate cytidylyltransferase (kdsB) {Escherichia coli}
4676.1  2.1      54 % (Q: 91.1 %/S: 90.2 %)     acetyltransferase (bme4) {Brucella melitensis}
2173.1  1.1      58 % (Q:100.4 %/S: 98.2 %)     apolipoprotein N-acyltransferase (lnt) {Sinorhizobium meliloti}
4529.1  2.1      74 % (Q: 77.2 %/S: 93.5 %)     beta 1,3 glucan synthase catalytic subunit (xxxX) {Agrobacterium sp. ATCC31749}
4481.1  2.1      64 % (Q: 99.7 %/S: 92.5 %)     capsule expression protein (kpsF) {Pseudomonas aeruginosa}
2467.1  2.1      99 % (Q: 78.7 %/S: 93.3 %)     celB protein (celB) {Agrobacterium tumefaciens}
2473.1  2.1      90 % (Q: 83.8 %/S: 78.6 %)     cellulose biosynthesis protein (celD) {Agrobacterium tumefaciens}
2466.1  2.1      99 % (Q:100.0 %/S: 84.7 %)     cellulose synthase (celA) {Agrobacterium tumefaciens}
2469.1  2.1      99 % (Q: 94.7 %/S: 11.9 %)     cellulose synthesis protein (celE) {Agrobacterium tumefaciens}
2470.1  2.1     100 % (Q: 88.0 %/S: 24.6 %)     cellulose synthesis protein (celE) {Agrobacterium tumefaciens}
2471.1  2.1      99 % (Q: 89.7 %/S: 27.9 %)     cellulose synthesis protein (celE) {Agrobacterium tumefaciens}
2472.1  2.1      96 % (Q: 89.3 %/S: 28.8 %)     cellulose synthesis protein (celE) {Agrobacterium tumefaciens}
931.1   1.1      48 % (Q: 85.3 %/S: 94.1 %)     dolichol-phosphate mannosyltransferase (xxxX) {Xylella fastidiosa}
4689.1  2.1      41 % (Q: 98.3 %/S: 94.5 %)     dTDP-4-dehydrorhamnose 3,5-epimerase (rfbC) {Synechocystis sp.(strain PCC 6803)}
3404.1  2.1      61 % (Q: 99.3 %/S: 99.7 %)     dTDP-4-dehydrorhamnose reductase (rfbD) {Rhizobium sp. NGR234}
3403.1  2.1      99 % (Q: 99.7 %/S:100.0 %)     dTDP-D-glucose-4,6-dehydratase (rffB) {Rhizobium sp. NGR234}
2460.1  2.1      61 % (Q: 90.9 %/S: 98.1 %)     dTDP-glucose 4-6-dehydratase (xxxX) {Xylella fastidiosa}
3402.1  2.1     100 % (Q:100.0 %/S:100.0 %)     dTDP-rhamnose-3,5-epimerase (rfbC) {Rhizobium sp}
2503.1  2.1      54 % (Q: 93.1 %/S: 97.3 %)     exopolysaccharide export protein (pssN) {Rhizobium leguminosarum bv. trifolii}
4682.1  2.1      22 % (Q: 90.7 %/S: 81.3 %)     exopolysaccharide export protein (pssL) {Xanthomonas campestris}
2536.1  2.1      51 % (Q: 96.3 %/S: 97.9 %)     exopolysaccharide polymerization/transport protein (xxxX) {Rhizobium leguminosarum bv. trifolii}
4125.1  2.1      56 % (Q: 95.2 %/S: 96.6 %)     exopolysaccharide polymerization/transport protein (exoP) {Rhizobium meliloti}
636.1   1.1      36 % (Q: 79.8 %/S: 90.1 %)     exopolysaccharide production protein (exoQ) {Bradyrhizobium japonicum}
836.1   1.1      72 % (Q: 81.3 %/S: 98.0 %)     exopolysaccharide production protein (pssA) {Rhizobium leguminosarum}
2073.1  2.1      61 % (Q: 96.2 %/S: 95.3 %)     exopolysaccharide production protein (exoQ) {Rhizobium meliloti}
2074.1  2.1      58 % (Q: 95.9 %/S: 95.2 %)     exopolysaccharide production protein (xxxX) {Mesorhizobium loti}
4492.1  2.1      37 % (Q: 84.8 %/S: 95.0 %)     exopolysaccharide production protein (exoZ) {Rhizobium meliloti}
4695.1  2.1      44 % (Q: 90.2 %/S: 91.1 %)     exopolysaccharide production protein (bme11) {Brucella melitensis}
330.1   1.1      54 % (Q: 97.1 %/S: 96.1 %)     exopolysaccharide production protein PssB (pssB) {Rhizobium leguminosarum bv. viciae}
4137.1  2.1      66 % (Q: 67.4 %/S: 63.3 %)     exopolysaccharide production repressor protein (exoX) {Sinorhizobium meliloti}
4681.1  2.1      32 % (Q: 97.6 %/S: 98.3 %)     exopolysaccharide synthesis protein (amsJ) {Streptomyces coelicolor}
3272.1  1.1      34 % (Q: 69.8 %/S: 87.2 %)     exoQ-like protein (exoQ) {Bradyrhizobium japonicum}
4696.1  2.1      55 % (Q: 91.2 %/S: 96.2 %)     GDP-fucose synthetase (fcl) {Rhizobium sp.strain NGR234}
4691.1  2.1      45 % (Q: 93.7 %/S: 94.1 %)     glucose-1-phosphate cytidylyltransferase (rfbF) {Streptomyces coelicolor}
3405.1  2.1      81 % (Q: 99.3 %/S:100.0 %)     glucose-1-phosphate thymidylyltransferase (xxxX) {Rhizobium sp.}
639.1   1.1      41 % (Q: 84.1 %/S: 94.1 %)     glycosyltransferase (xxxX) {Streptomyces coelicolor A3(2)}
1648.1  1.1      30 % (Q: 99.6 %/S: 62.8 %)     glycosyltransferase (xxxX) {Synechocystis sp}
2504.1  2.1      54 % (Q: 98.1 %/S: 95.3 %)     glycosyltransferase (xxxX) {Salmonella choleraesuis}
2531.1  2.1      33 % (Q: 42.9 %/S: 38.3 %)     glycosyltransferase (xxxX) {Pseudomonas aeruginosa}
2534.1  2.1      27 % (Q: 82.5 %/S: 90.9 %)     glycosyltransferase (xxxX) {Klebsiella pneumoniae}
2537.1  2.1      23 % (Q: 83.2 %/S: 90.1 %)     glycosyltransferase (xxxX) {Klebsiella pneumoniae}
2538.1  2.1      32 % (Q: 63.7 %/S: 63.2 %)     glycosyltransferase (xxxX) {Synechocystis sp}
2539.1  2.1      29 % (Q: 69.4 %/S: 69.6 %)     glycosyltransferase (xxxX) {Streptococcus salivarius}
3224.1  1.1      52 % (Q: 97.4 %/S:100.0 %)     glycosyltransferase (xxxX) {Bacillus halodurans}
3406.1  2.1      33 % (Q: 81.6 %/S: 81.0 %)     glycosyltransferase (wbbL) {Mycobacterium smegmatis}
3407.1  2.1      42 % (Q: 39.4 %/S: 38.4 %)     glycosyltransferase (xxxX) {Synechocystis sp}
3408.1  2.1      25 % (Q: 63.1 %/S: 68.9 %)     glycosyltransferase (wbnE) {Escherichia coli}
3411.1  2.1      53 % (Q: 96.7 %/S:100.0 %)     glycosyltransferase (xxxX) {Burkholderia pseudomallei}
4265.1  1.1      51 % (Q: 97.8 %/S: 98.6 %)     glycosyltransferase (xxxX) {Synechococcus PCC7942}
4673.1  2.1      49 % (Q: 96.6 %/S: 96.9 %)     glycosyltransferase (bme8) {Brucella melitensis}
4674.1  2.1      57 % (Q: 94.4 %/S: 98.1 %)     glycosyltransferase (bme7) {Brucella melitensis}
4675.1  2.1      47 % (Q: 99.7 %/S:104.3 %)     glycosyltransferase (bme6) {Brucella melitensis}
4680.1  2.1      34 % (Q: 50.4 %/S: 53.3 %)     glycosyltransferase (xxxX) {Synechococcus PCC7942}
4683.1  2.1      26 % (Q: 69.0 %/S: 78.6 %)     glycosyltransferase (pssF) {Rickettsia prowazekii}
1339.1  1.1      48 % (Q: 97.5 %/S: 98.5 %)     lipid A-disaccharide synthase (lpxB) {Pseudomonas aeruginosa}
2836.1  1.1      69 % (Q: 97.7 %/S: 97.4 %)     lipopolysaccharide core biosynthesis mannosyltransferase (lpcC) {Rhizobium leguminosarum}
123.1   1.1      43 % (Q: 99.3 %/S: 99.0 %)     N-acetylmuramoyl-L-alanine amidase (amiA) {Pseudomonas aeruginosa}
1095.1  1.1      55 % (Q: 97.5 %/S: 99.4 %)     phosphomannomutase (noeK) {Rhizobium sp. NGR234}
544.1   2.1      46 % (Q: 88.0 %/S: 98.6 %)     polysaccharide biosynthesis associated protein (xxxX) {Pyrococcus abyssi}
2154.1  1.1      65 % (Q: 91.2 %/S: 90.3 %)     polysaccharide biosynthesis glycosyltransferase (xxxX) {Pseudomonas aeruginosa}
637.1   1.1      25 % (Q: 93.0 %/S: 80.5 %)     polysaccharide biosynthesis protein (xxxX) {Bacillus subtilis}
4694.1  2.1      34 % (Q: 94.9 %/S: 93.7 %)     polysaccharide biosynthesis protein (bme12) {Brucella melitensis}
4589.1  2.1     100 % (Q: 63.8 %/S:100.0 %)     probable di-trans,poly-cis-decaprenylcistransferase (yteR) {Agrobacterium tumefaciens}
2075.1  2.1      95 % (Q:100.0 %/S:100.0 %)     structural gene (exoY) {Agrobacterium tumefaciens}
4127.1  2.1      61 % (Q: 96.6 %/S: 90.5 %)     succinoglycan biosynthesis glycosyltransferase (exoO) {Rhizobium meliloti}
4136.1  2.1      63 % (Q: 98.8 %/S: 95.0 %)     succinoglycan biosynthesis glycosyltransferase (exoU) {Sinorhizobium meliloti}
2056.1  1.1      45 % (Q: 83.8 %/S: 90.2 %)     succinoglycan biosynthesis protein (exoI) {Sinorhizobium meliloti}
4128.1  2.1      59 % (Q: 97.8 %/S: 99.4 %)     succinoglycan biosynthesis protein (exoM) {Rhizobium meliloti}
4129.1  2.1      70 % (Q: 96.4 %/S: 97.0 %)     succinoglycan biosynthesis protein (exoA) {Rhizobium meliloti (Sinorhizobium meliloti)}
4130.1  2.1      61 % (Q: 97.5 %/S: 95.0 %)     succinoglycan biosynthesis protein (exoL) {Sinorhizobium meliloti}
4132.1  2.1      55 % (Q: 92.9 %/S: 95.4 %)     succinoglycan biosynthesis protein (exoH) {Rhizobium meliloti}
4134.1  2.1      65 % (Q: 99.4 %/S:100.0 %)     succinoglycan biosynthesis protein (exoW) {Sinorhizobium meliloti}
4135.1  2.1      63 % (Q:101.2 %/S:103.2 %)     succinoglycan biosynthesis protein (exoV) {Sinorhizobium meliloti}
2092.1  2.1      72 % (Q: 98.3 %/S:100.0 %)     succinoglycan biosynthesis regulator (exsB) {Sinorhizobium meliloti}
1094.1  1.1      29 % (Q: 88.7 %/S: 60.6 %)     succinoglycan biosynthesis transport protein (xxxX) {Bradyrhizobium japonicum}
2151.1  1.1      42 % (Q: 99.5 %/S: 98.6 %)     succinoglycan biosynthesis transport protein (exoP) {Rhizobium meliloti}
2533.1  2.1      22 % (Q: 94.3 %/S: 82.7 %)     succinoglycan biosynthesis transport protein (exoT) {Sinorhizobium meliloti}
4133.1  2.1      71 % (Q: 98.8 %/S: 98.4 %)     succinoglycan biosynthesis transport protein (exoT) {Rhizobium meliloti}
3413.1  2.1      38 % (Q: 93.0 %/S: 96.9 %)     sugar acetylase (nodX) {Rhizobium leguminosarum}
3410.1  2.1      57 % (Q: 98.9 %/S: 98.1 %)     sugar nucleotide epimerase/dehydratase (xxxX) {Mycobacterium avium}
766.1   1.1      62 % (Q: 99.4 %/S:100.0 %)     UDP-3-0-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase (lpxC) {Haemophilus influenzae Rd}
2411.1  2.1      66 % (Q: 97.7 %/S: 97.9 %)     UDP-galactopyranose mutase (glf) {Klebsiella pneumoniae}
3047.1  1.1      66 % (Q: 99.7 %/S:100.0 %)     UDP-glucose 4-epimerase (galE) {Bacillus halodurans}
4224.1  2.1      78 % (Q: 99.7 %/S: 99.7 %)     UDP-glucose 4-epimerase (galE) {Sinorhizobium meliloti}
4210.1  2.1      80 % (Q: 98.4 %/S: 99.8 %)     UDP-glucose 6-dehydrogenase (ugdH) {Sinorhizobium meliloti}
4264.1  1.1      67 % (Q:100.0 %/S:100.0 %)     UDP-glucose/GDP-mannose dehydrogenase (xxxX) {Pseudomonas aeruginosa (strain PAO1)}
4209.1  2.1      80 % (Q: 97.3 %/S: 96.8 %)     UDP-glucuronic acid epimerase (lspL) {Sinorhizobium meliloti}
1091.1  1.1      40 % (Q: 89.6 %/S: 75.3 %)     UDP-hexose transferase (exoU) {Bradyrhizobium japonicum}
1092.1  1.1      43 % (Q: 98.1 %/S: 90.3 %)     UDP-hexose transferase (exoM) {Bradyrhizobium japonicum}
1093.1  1.1      44 % (Q: 94.7 %/S: 94.0 %)     UDP-hexose transferase (exoT) {Bradyrhizobium japonicum}
1280.1  1.1      59 % (Q: 99.8 %/S: 98.7 %)     UDP-N-acetylglucosamine pyrophosphorylase (glmU) {Pseudomonas aeruginosa}
4679.1  2.1      31 % (Q: 87.9 %/S: 91.3 %)     undecaprenyl-phosphate alpha N-acetylglucosaminyltransferase (rfe) {Salmonella typhimurium}
4126.1  2.1      75 % (Q: 98.0 %/S:100.0 %)     UTP-glucose-1-phosphate uridylyltransferase (exoN) {Rhizobium meliloti}

13.5. CELL ENVELOPE/DEGRADATION OF POLYSACCHARIDES (18 genes)

4603.1  2.1      52 % (Q: 98.5 %/S: 91.2 %)     4-deoxy-L-threo-5-hexosulose-uronate (kduI) {Bacillus halodurans}
2273.1  1.1      71 % (Q: 98.4 %/S:100.5 %)     alpha-glucosidase (aglA) {Sinorhizobium meliloti}
1719.1  2.1      95 % (Q:100.0 %/S:100.0 %)     beta-glucosidase (bgl) {Agrobacterium sp.}
2755.1  1.1      73 % (Q: 99.4 %/S: 99.6 %)     coenzyme A transferase (xxxX) {Pseudomonas aeruginosa}
2542.1  2.1      69 % (Q: 99.8 %/S: 99.8 %)     endo-1,3-1,4-beta-glycanase (xxxX) {Rhizobium meliloti}
4131.1  2.1      69 % (Q: 87.5 %/S: 94.1 %)     endo-1,3-1,4-beta-glycanase (exoK) {Sinorhizobium meliloti}
2468.1  2.1      95 % (Q: 80.1 %/S: 71.3 %)     endoglucanase (celC) {Agrobacterium tumefaciens}
4662.1  2.1      63 % (Q: 99.1 %/S: 98.6 %)     glucoamylase (cga) {Clostridium sp}
91.1    1.1      50 % (Q: 92.2 %/S: 98.1 %)     glycosyl hydrolase/lysozyme (lyc) {Escherichia coli}
3566.1  1.1      60 % (Q: 95.3 %/S:101.3 %)     lysozyme (xxxX) {Mesorhizobium loti}
88.1    1.1      35 % (Q:100.3 %/S: 94.5 %)     lytic murein transglycosylase (xxxX) {Pseudomonas putida}
826.1   1.1      59 % (Q: 97.9 %/S: 99.3 %)     lytic murein transglycosylase (mltB) {Pseudomonas aeruginosa}
2785.1  1.1      56 % (Q: 90.7 %/S: 94.4 %)     lytic murein transglycosylase (mltB) {Pseudomonas aeruginosa}
1962.1  1.1      53 % (Q: 96.8 %/S: 97.8 %)     membrane-bound lytic murein transglycosylase (mltA) {Neisseria meningitidis}
4483.1  2.1      53 % (Q: 98.5 %/S: 95.7 %)     murein hydrolase (mltB) {Pseudomonas aeruginosa}
191.1   1.1      58 % (Q: 95.0 %/S: 98.0 %)     N-acetylmuramoyl-L-alanine amidase (xxxX) {Pseudomonas aeruginosa}
192.1   1.1      46 % (Q:102.8 %/S: 64.8 %)     soluble lytic transglycosylase (slt) {Aquifex aeolicus}
4560.1  2.1      42 % (Q: 78.2 %/S: 67.3 %)     transglycosylase (xxxx) {Mesorhizobium loti}

13.6. CELL ENVELOPE/MEMBRANE ASSOCIATED RECEPTORS (2 genes)

1824.1  2.1      27 % (Q:106.1 %/S:108.9 %)     heme receptor (hasR) {Serratia marcescens}
3215.1  1.1      29 % (Q: 94.8 %/S: 95.0 %)     outer membrane heme receptor (xxxX) {pseudomonas aeruginosa}

13.7. CELL ENVELOPE/OSMOTIC ADAPTATION (1 genes)

505.1   1.1      87 % (Q:100.0 %/S:100.0 %)     choline dehydrogenase (betA) {Sinorhizobium meliloti}

13.99. CELL ENVELOPE/OTHER (3 genes)

2765.1  1.1      58 % (Q:100.0 %/S: 99.5 %)     60 kd inner-membrane protein (xxxX) {Rickettsia prowazekii}
3039.1  1.1      46 % (Q: 90.0 %/S: 90.2 %)     cyclopropane-fatty-acyl-phospholipid synthase (xxxX) {Caenorhabditis elegans}
4262.1  1.1      58 % (Q: 92.5 %/S: 95.1 %)     metal dependant beta lactamase protein (xxxX) {Calothrix viguieri}

14.1. CELLULAR PROCESSES/CELL DIVISION (27 genes)

1441.1  4.1      50 % (Q: 93.9 %/S: 98.5 %)     AAA-family ATPase (FtsH) {Rhizobium}
3109.1  2.1      38 % (Q:102.9 %/S: 99.2 %)     bacterial septum site-determining protein (MinC) {Xylella fastidiosa}
4427.1  2.1      36 % (Q: 96.6 %/S: 94.3 %)     cell cycle protein MesJ/cytosine deaminase-related protein (xxxX) {Bradyrhizobium japonicum}
1219.1  2.1      78 % (Q:100.0 %/S:100.0 %)     cell division ATP-binding protein (ftsE) {Pseudomonas aeruginosa}
3108.1  2.1      74 % (Q:100.0 %/S:100.0 %)     cell division inhibitor (minD) {Escherichia coli}
4361.1  1.1      78 % (Q: 64.2 %/S: 98.1 %)     cell division particle (fstY) {Caulobacter crescentus}
756.1   1.1      65 % (Q: 96.4 %/S: 96.6 %)     cell division protein (ftsW) {Caulobacter crescentus}
763.1   1.1     100 % (Q: 67.7 %/S:100.0 %)     cell division protein (ftsQ) {Agrobacterium tumefaciens}
764.1   1.1     100 % (Q:100.0 %/S:100.0 %)     cell division protein (ftsA) {Agrobacterium tumefaciens}
765.1   1.1      98 % (Q:100.0 %/S:100.0 %)     cell division protein (ftsZ) {Agrobacterium tumefaciens}
1220.1  2.1      59 % (Q: 92.5 %/S: 93.9 %)     cell division protein (FtsX) {Pseudomonas putida}
1613.1  1.1      62 % (Q: 95.9 %/S: 89.1 %)     cell division protein (ftsJ) {Rickettsia prowazekii}
3077.1  2.1      58 % (Q: 97.2 %/S:102.8 %)     cell division protein (ftsK) {Rickettsia prowazekii}
3303.1  1.1      62 % (Q:100.0 %/S:100.5 %)     cell division protein (ftsK) {Rickettsia prowazekii}
3354.1  2.1      64 % (Q: 99.4 %/S: 92.7 %)     cell division protein (ftsZ) {Rhizobium meliloti}
3803.1  2.1      75 % (Q: 78.4 %/S: 33.8 %)     cell division protein (xxxX) {Rhizobium meliloti}
3107.1  2.1      62 % (Q: 91.9 %/S: 86.8 %)     cell division topological specificity factor (minE) {Neisseria meningitidis}
1426.1  4.1      96 % (Q:100.0 %/S:100.0 %)     cell filamentation protein (fic) {Agrobacterium tumefaciens}
1882.1  1.1      64 % (Q: 99.9 %/S:100.2 %)     chromosome segregation protein (smc) {Caulobacter crescentus}
4227.1  2.1      63 % (Q:102.6 %/S:101.8 %)     cold-shock dead-box protein A (deaD) {Escherichia coli}
1976.1  1.1      43 % (Q: 94.6 %/S: 92.4 %)     glucose inhibited division protein (gidB) {Caulobacter crescentus}
3501.1  1.1      76 % (Q: 89.0 %/S: 97.9 %)     glucose inhibited division protein (gidA) {Rhodobacter capsulatus}
1975.1  1.1      64 % (Q: 97.8 %/S: 98.4 %)     glucose inhibited division protein A (gidA) {Caulobacter crescentus}
2766.1  1.1      84 % (Q: 92.6 %/S: 94.8 %)     GTP-binding protein (xxxX) {Zymomonas mobilis}
4360.1  1.1      68 % (Q: 98.6 %/S: 96.0 %)     intracellular septation protein (ispZ) {Bradyrhizobium japonicum}
1969.1  1.1      59 % (Q:100.0 %/S:100.0 %)     maf protein (maf) {Pyrococcus abyssi}
1783.1  1.1      66 % (Q: 96.6 %/S: 96.2 %)     septum formation associated protein (maf) {Rickettsia prowazekii}

14.2. CELLULAR PROCESSES/CHAPERONES-COLD SHOCK-HEAT SHOCK (27 genes)

1188.1  1.1      94 % (Q:100.0 %/S:100.0 %)     10 KD chaperonin (protein CPN10) (groES) {Agrobacterium tumefaciens}
2724.1  1.1      61 % (Q: 98.8 %/S: 96.7 %)     33 kda chaperonin, heat shock protein 33 (hslO) {Escherichia coli}
1189.1  1.1      99 % (Q:100.0 %/S:100.0 %)     60 KDA chaperonin (groEL) {Agrobacterium tumefaciens}
839.1   1.1      82 % (Q: 98.6 %/S: 98.6 %)     cold shock protein (cspA) {Rhizobium sp. (strain NGR234)}
948.1   1.1      75 % (Q: 97.2 %/S: 98.6 %)     cold shock protein (cspA) {Rhizobium sp. (strain NGR234)}
1292.1  1.1      75 % (Q: 88.5 %/S: 93.9 %)     cold shock protein (cspA) {Salmonella typhimurium}
2324.1  3.1      88 % (Q: 98.6 %/S: 98.6 %)     cold shock protein (cspA) {Rhizobium sp. strain NGR234}
3804.1  2.1      95 % (Q:100.0 %/S:100.0 %)     cold shock protein (cspA) {Rhizobium sp. NGR234}
4586.1  2.1      83 % (Q: 98.6 %/S: 98.6 %)     cold shock protein (cspA) {Rhizobium sp. strain NGR234}
6026.1  2.1      35 % (Q:101.0 %/S:102.1 %)     cold shock protein (xxxX) {sinorhizobium meliloti}
313.1   1.1      99 % (Q:100.0 %/S:100.0 %)     DNAK Protein (dnaK) {Agrobacterium tumefaciens}
2202.1  1.1     100 % (Q:100.0 %/S:100.0 %)     GRPE protein (grpE) {Agrobacterium tumefaciens}
1022.1  1.1      79 % (Q:100.5 %/S: 98.6 %)     heat shock chaperone (hslU) {Aquifex aeolicus}
1021.1  1.1      82 % (Q: 99.4 %/S: 97.7 %)     heat shock protein hslV (hslV) {Rickettsia prowazekii}
1936.1  3.1      50 % (Q: 98.1 %/S:101.3 %)     heat-shock protein (ibpA) {Pseudomonas aeruginosa}
190.1   1.1      59 % (Q: 95.2 %/S: 99.6 %)     molecular chaperone, DnaJ family (djlA) {Escherichia coli}
314.1   1.1      91 % (Q: 87.8 %/S:100.0 %)     molecular chaperone, DnaJ family (dnaJ) {Brucella ovis}
1235.1  2.1      74 % (Q: 82.5 %/S:101.8 %)     molecular chaperone, DnaJ family (dnaJ) {Pseudomonas denitrificans}
1331.1  1.1      32 % (Q: 97.8 %/S:117.5 %)     molecular chaperone, DnaJ family (dnaJ) {Anabaena variabilis}
2325.1  3.1      46 % (Q: 87.3 %/S: 93.7 %)     molecular chaperone, DnaJ family (dnaJ) {Pseudomonas denitrificans}
3022.1  1.1      51 % (Q: 31.0 %/S: 15.2 %)     molecular chaperone, DnaJ family (dnaJ) {Babesia bovis}
879.1   1.1      50 % (Q: 90.1 %/S: 96.0 %)     molecular chaperone, Hsp70 family (xxxX) {Escherichia coli}
942.1   1.1      76 % (Q: 96.5 %/S: 91.6 %)     secretion chaperone (csaA) {Bacillus subtilis}
2771.1  1.1      71 % (Q: 97.9 %/S:100.0 %)     small heat shock protein (hspH) {Bradyrhizobium japonicum}
3692.1  2.1      69 % (Q: 95.6 %/S: 98.7 %)     small heat shock protein (ibpA) {Bradyrhizobium japonicum}
3935.1  3.1      54 % (Q: 86.7 %/S: 88.4 %)     small heat shock protein (ibpA) {Bradyrhizobium japonicum}
3500.1  1.1      63 % (Q:100.4 %/S:100.4 %)     trigger factor (tig) {Azospirillum brasilense}

14.3. CELLULAR PROCESSES/DETOXIFICATION (28 genes)

1846.1  2.1      75 % (Q: 81.9 %/S: 80.4 %)     2-haloalkanoic acid dehalogenase (hadL) {Streptomyces coelicolor A3(2)}
3621.1  1.1      67 % (Q:100.0 %/S:100.0 %)     acetyltransferase (xxxX) {Agrobacterium tumefaciens}
1917.1  1.1      61 % (Q: 98.6 %/S: 97.9 %)     arsenate reductase (arsC) {Acidiphilium multivorum}
1918.1  1.1      73 % (Q: 93.2 %/S: 90.2 %)     arsenical resistance protein (arsH) {Acidithiobacillus ferrooxidans}
171.1   1.1      94 % (Q:100.0 %/S:100.0 %)     arylesterase (ada) {Agrobacterium radiobacter}
1732.1  1.1      62 % (Q:100.0 %/S:100.0 %)     bacterioferritin comigratory protein (bcp) {Synechocystis PCC 6803}
1619.1  1.1      68 % (Q: 96.9 %/S:100.0 %)     carboxymethylenebutenolidase (dlhH) {Escherichia coli}
3380.1  2.1      99 % (Q:100.0 %/S:100.0 %)     catalase (katA) {Agrobacterium tumefaciens}
2305.1  3.1      76 % (Q: 98.7 %/S:102.5 %)     catalase C (catE) {Sinorhizobium meliloti}
958.1   2.1      31 % (Q: 86.3 %/S:102.1 %)     chlorohydrolase (xxxX) {Methanobacterium thermoautotrophicum}
2423.1  2.1      64 % (Q:100.6 %/S: 93.5 %)     copper tolerance protein (copC) {Aeromonas veronii bv. Sobria}
2425.1  2.1      76 % (Q: 98.2 %/S: 99.0 %)     copper tolerance protein (copB) {Pseudomonas fluorescens}
1297.1  1.1      43 % (Q: 92.3 %/S:100.6 %)     epoxide hydrolase (xxxX) {Mycobacterium tuberculosis}
4387.1  2.1      43 % (Q: 99.4 %/S: 99.7 %)     epoxide hydrolase (ephA) {Mycobacterium tuberculosis}
1686.1  1.1      42 % (Q: 98.5 %/S: 96.8 %)     ferredoxin reductase (xxxX) {Sphingomonas sp}
2901.1  3.1      38 % (Q: 74.9 %/S: 54.5 %)     haloacid dehalogenase (xxxX) {Pyrococcus abyssi}
1843.1  2.1      87 % (Q:100.0 %/S:100.0 %)     haloalkanoic acid dehalogenase (hadL) {Mesorhizobium loti}
3188.1  1.1      53 % (Q:100.3 %/S:100.0 %)     maleylacetate reductase (macA) {Burkholderia cepacia}
2424.1  2.1      89 % (Q:100.0 %/S:100.0 %)     multicopper oxidase (copA) {Aeromonas veronii bv. Sobria}
1158.1  2.1      63 % (Q: 99.6 %/S:100.0 %)     non-heme chloroperoxidase (cpoF) {Pseudomonas fluorescens}
3925.1  3.1      59 % (Q:100.4 %/S:100.0 %)     non-heme chloroperoxidase (prxC) {Pseudomonas fluorescens}
487.1   1.1      62 % (Q: 97.9 %/S: 96.5 %)     organic hydroperoxide resistance protein (xxxX) {Pseudomonas aeruginosa}
2399.1  1.1      44 % (Q:101.1 %/S: 99.3 %)     organic solvent tolerance protein (ostA) {Pseudomonas aeruginosa}
1866.1  1.1      66 % (Q:100.0 %/S:100.6 %)     peroxiredoxin (xxxX) {Oryza sativa}
608.1   1.1      77 % (Q: 99.1 %/S: 78.8 %)     streptogramin A acetyl transferase (attR) {Agrobacterium tumefaciens}
1391.1  1.1      87 % (Q:100.0 %/S:100.0 %)     superoxide dismutase (sodF) {sinorhizobium meliloti}
4753.1  2.1      42 % (Q: 84.0 %/S: 96.0 %)     superoxide dismutase (sodB) {Nicotiana plumbaginifolia}
2653.1  2.1      74 % (Q:100.5 %/S:100.0 %)     superoxide dismutase [Fe] (sodB) {Rhodobacter capsulatus}

14.4. CELLULAR PROCESSES/PROTEIN AND PEPTIDE SECRETION (7 genes)

379.1   1.1      78 % (Q: 97.5 %/S: 81.4 %)     ABC transporter, nucleotide binding/ATPase protein [lipoprotein] {}
854.1   1.1      55 % (Q: 97.7 %/S: 96.9 %)     ABC transporter, nucleotide binding/ATPase protein [protein] (prsD) {Sinorhizobium meliloti}
855.1   1.1      56 % (Q: 98.2 %/S: 97.7 %)     HlyD family secretion protein (prsE) {Sinorhizobium meliloti}
2191.1  1.1      53 % (Q: 90.1 %/S: 86.9 %)     lipoprotein signal peptidase (lspA) {Neisseria meningitidis MC58}
1674.1  1.1      63 % (Q: 99.6 %/S: 99.2 %)     prokaryotic type I signal peptidase (sipf) {Bradyrhizobium japonicum}
1822.1  2.1      59 % (Q: 91.4 %/S: 96.7 %)     rhiziobicin secretion (prsD) {Rhizobium leguminosarum bv. trifolii}
1821.1  2.1      55 % (Q: 97.9 %/S: 98.6 %)     secretion protein, HlyD family (prsE) {Rhizobium leguminosarum bv. trifolii}

14.5. CELLULAR PROCESSES/TRANSFORMATION (4 genes)

553.1   2.1      50 % (Q: 93.5 %/S: 95.8 %)     competence protein F (comF) {Zymomonas mobilis}
2612.1  1.1      67 % (Q: 90.5 %/S: 96.4 %)     competence-damage associated protein (cinA) {Zymomonas mobilis}
1535.1  1.1      57 % (Q: 92.9 %/S: 94.0 %)     competence/damage-inducible protein CinA (cinA) {Pantoea agglomerans}
794.1   1.1      60 % (Q: 97.6 %/S: 98.4 %)     DNA processing chain A (xxxX) {Zymomonas mobilis}

14.6. CELLULAR PROCESSES/TOXIN PRODUCTION AND RESISTANCE (65 genes)

1390.1  1.1      54 % (Q: 84.5 %/S: 89.7 %)     acetyltransferase (xxxX) {Pseudomonas aeruginosa}
4588.1  2.1     100 % (Q: 52.3 %/S:100.0 %)     acetyltransferase (RspF) {Agrobacterium tumefaciens}
4238.1  1.1     100 % (Q:100.0 %/S:100.0 %)     acriflavin resistance protein A (acrA) {Agrobacterium tumefaciens A348}
4239.1  1.1      99 % (Q:100.0 %/S:100.0 %)     acriflavin resistance protein B (acrB) {Agrobacterium tumefaciens A348}
3191.1  1.1      37 % (Q: 86.0 %/S: 88.0 %)     actinorhodin polyketide dimerase (actI) {Streptomyces coelicolor}
3221.1  1.1      53 % (Q: 89.0 %/S: 94.5 %)     aminoglycoside N6'-acetyltransferase (xxxX) {Serratia marcescens}
461.1   1.1      41 % (Q: 98.7 %/S: 61.8 %)     aminoglycoside phosphotransferase (kka) {Mycobacterium tuberculosis}
3511.1  1.1      66 % (Q:100.0 %/S:100.0 %)     bacitracin resistance protein (bacA) {Zymomonas mobilis}
1581.1  3.1      24 % (Q: 64.6 %/S: 59.5 %)     beta-lactamase (xxxX) {Vibrio cholerae}
1816.1  2.1      26 % (Q: 87.9 %/S: 89.5 %)     beta-lactamase (carB) {Deinococcus radiodurans}
4548.1  2.1      47 % (Q: 97.4 %/S: 96.2 %)     beta-lactamase (ampC) {Hafnia alvei}
719.1   1.1      57 % (Q: 86.9 %/S: 95.2 %)     beta-lactamase class D (xxxX) {Pseudomonas aeruginosa}
4743.1  2.1     100 % (Q:100.0 %/S:100.0 %)     chloramphenicol acetyltransferase (cat) {Agrobacterium tumefaciens C58}
3728.1  2.1      57 % (Q: 97.2 %/S: 96.5 %)     chloramphenicol resistance protein (xxxX) {Bacillus subtilis}
2650.1  2.1      77 % (Q: 97.5 %/S: 98.9 %)     choloylglycine hydrolase family protein (xxxX) {Vibrio cholerae (group O1 strain N16961)}
234.1   1.1      55 % (Q: 91.9 %/S: 87.4 %)     colicin V production protein (cvpA) {Escherichia coli}
1584.1  3.1      25 % (Q: 88.1 %/S: 78.2 %)     efflux protein (xxxX) {Pseudomonas aeruginosa}
1604.1  3.1      36 % (Q: 98.2 %/S:105.1 %)     efflux protein (xxxX) {Escherichia coli}
4615.1  2.1      64 % (Q: 99.0 %/S: 93.1 %)     fosmidomycin resistance protein (fsr) {Mesorhizobium loti}
4405.1  2.1      33 % (Q: 89.5 %/S: 82.8 %)     gramicidin S biosynthesis thioesterase (grsT) {Bacillus brevis}
1312.1  1.1      67 % (Q: 98.0 %/S: 96.5 %)     hemolysin (tlyA) {Thermotoga maritima (strain MSB8)}
2174.1  1.1      56 % (Q: 90.8 %/S: 80.2 %)     hemolysin (xxxX) {Rickettsia typhi}
4447.1  2.1      55 % (Q: 99.8 %/S: 96.1 %)     hemolysin (tlyC) {Zymomonas mobilis}
1414.1  1.1      51 % (Q: 90.1 %/S: 91.7 %)     Hemolysin III (xxxX) {Escherichia coli}
3161.1  1.1      70 % (Q: 90.7 %/S: 99.1 %)     Isochorismatase (xxxX) {Escherichia coli}
3905.1  3.1      87 % (Q:100.0 %/S:100.0 %)     metallo-beta-lactamase (xxxX) {Streptomyces coelicolor}
397.1   1.1      27 % (Q: 99.0 %/S: 98.5 %)     MFS permease [drug] (xxxX) {Pseudomonas aeruginosa}
1083.1  1.1      28 % (Q:101.0 %/S: 95.5 %)     MFS permease [drug] (xxxX) {Campylobacter jejuni}
4337.1  1.1      30 % (Q: 93.0 %/S: 92.3 %)     MFS permease [drug] (xxxX) {Coxiella burnetii}
1714.1  2.1      68 % (Q: 98.5 %/S: 97.7 %)     MFS permease [multidrug] (emrB) {Rickettsia prowazekii}
4404.1  2.1      37 % (Q: 74.6 %/S: 19.5 %)     microcystin synthetase B (mcyB) {Microcystis aeruginosa}
1713.1  2.1      58 % (Q: 93.1 %/S: 95.4 %)     multidrug resistance efflux pump (emrA) {Pseudomonas aeruginosa}
511.1   2.1      85 % (Q: 99.6 %/S: 99.6 %)     non-heme haloperoxidase (xxxX) {Pseudomonas pyrrocinia}
1551.1  3.1      86 % (Q: 99.6 %/S: 99.6 %)     non-heme haloperoxidase (xxxX) {Pseudomonas pyrrocinia}
4402.1  2.1      39 % (Q: 83.7 %/S: 76.5 %)     non-ribosomal peptide synthetase (mtaD) {Stigmatella aurantiaca}
3190.1  1.1      38 % (Q: 91.9 %/S: 95.4 %)     oxidoreductase (xxxX) {Mycobacterium tuberculosis}
3174.1  1.1      24 % (Q: 58.3 %/S: 81.4 %)     penicillin binding protein (xxxX) {Mycobacterium tuberculosis}
1862.1  1.1      79 % (Q: 95.1 %/S: 98.5 %)     penicillin tolerance protein (lytB) {Haemophilus influenzae (strain Rd KW20)}
4367.1  2.1      46 % (Q: 92.5 %/S: 92.5 %)     penicillin-binding protein dacf precursor (dacF) {Rickettsia prowazekii}
4393.1  2.1      34 % (Q: 94.9 %/S: 41.1 %)     peptide synthetase (xxxX) {Myxococcus xanthus}
4397.1  2.1      36 % (Q:100.9 %/S:101.3 %)     peptide synthetase (xxxX) {Anabaena sp. 90}
4403.1  2.1      36 % (Q:101.2 %/S: 42.4 %)     peptide synthetase (xxxX) {Bacillus licheniformis}
4543.1  2.1      32 % (Q:101.4 %/S:101.7 %)     peptide synthetase (xxxX) {Mesorhizobium loti}
538.1   1.1      50 % (Q: 98.0 %/S: 99.0 %)     phenazine antibiotic biosynthesis related protein (xxxX) {Synechocystis sp}
593.1   4.1      82 % (Q:100.0 %/S:100.0 %)     Phenazine biosynthesis protein (phzF) {Halobacterium sp. NRC-1}
3751.1  2.1      48 % (Q: 99.6 %/S:100.7 %)     phenazine biosynthesis protein (phzC) {Pseudomonas aeruginosa}
4021.1  2.1      68 % (Q: 96.9 %/S: 95.0 %)     phenylacrylic acid decarboxylase (xxxX) {Sphingomonas aromaticivorans}
1415.1  1.1      59 % (Q:100.0 %/S: 95.9 %)     Phosphinothricin acetyltransferase (xxxX) {Pseudomonas aeruginosa}
1179.1  1.1      67 % (Q: 99.8 %/S: 96.5 %)     PmbA/TldD related protein (xxxX) {Zymomonas mobilis}
2574.1  1.1      52 % (Q: 88.0 %/S: 94.2 %)     polyketide biosynthesis associated protein (xxxX) {Vibrio cholerae}
3970.1  3.1      31 % (Q: 97.2 %/S: 96.7 %)     polyketide synthase (frnE) {Xylella fastidiosa}
4395.1  2.1      42 % (Q: 64.4 %/S: 78.7 %)     polyketide synthase (xxxX) {Nostoc sp. GSV224}
4396.1  2.1      39 % (Q: 92.1 %/S: 39.0 %)     polyketide synthetase (xxxX) {Myxococcus xanthus}
4401.1  2.1      51 % (Q: 60.3 %/S: 71.5 %)     polyketide synthetase (xxxX) {Nostoc sp. GSV224}
448.1   1.1      50 % (Q: 99.5 %/S: 94.5 %)     pyrazinamidase/nicotinamidase (pncA) {Escherichia coli K12}
3241.1  1.1      51 % (Q: 91.2 %/S: 94.5 %)     quaternary ammonium compound-resistance protein (xxxX) {Pseudomonas aeruginosa}
856.1   1.1      31 % (Q: 65.9 %/S:  5.0 %)     rhizobiocin (RzcA) {Rhizobium leguminosarum bv. trifolii}
4005.1  2.1      27 % (Q: 37.9 %/S: 59.5 %)     rhizobiocin/RTX toxin (rzcA) {Rhizobium leguminosarum bv. trifolii}
3071.1  2.1      47 % (Q: 95.5 %/S: 97.2 %)     RND multidrug efflux membrane permease (acrA) {Pseudomonas aeruginosa}
3070.1  2.1      58 % (Q: 99.7 %/S: 99.8 %)     RND multidrug efflux transporter (acrB) {Pseudomonas aeruginosa}
389.1   1.1      41 % (Q: 96.3 %/S: 82.0 %)     secretion protein (xxxX) {Pseudomonas aeruginosa}
2148.1  1.1      45 % (Q: 99.3 %/S:100.0 %)     streptomycin resistance protein (strB) {Pseudomonas aeruginosa}
3811.1  2.1     100 % (Q:100.0 %/S:100.0 %)     tetracycline resistance protein (tetA) {Agrobacterium tumefaciens}
537.1   1.1      43 % (Q:101.7 %/S: 99.5 %)     Tetracycline resistance protein, tetM/tetO subfamily (xxxX) {Streptomyces rimosus}
2186.1  1.1      77 % (Q: 99.6 %/S: 98.5 %)     virulence factor MviN homolog (mviN) {Rhizobium meliloti}

14.7. CELLULAR PROCESSES/SEC-DEPENDANT PROTEIN SECRETION (7 genes)

547.1   2.1      75 % (Q:100.8 %/S: 99.9 %)     preprotein translocase SECA subunit (secA) {Rhodobacter capsulatus}
2022.1  1.1      82 % (Q:100.0 %/S:100.0 %)     Preprotein translocase SECY subunit (prlA) {Escherichia coli}
3428.1  1.1      63 % (Q: 98.0 %/S: 98.9 %)     protein-export membrane protein SECD (secD) {Brucella abortus}
3469.1  1.1      62 % (Q:100.6 %/S:102.6 %)     protein-export membrane protein SECG (secG) {Pseudomonas syringae pv . syringae}
1965.1  1.1      72 % (Q: 95.0 %/S: 91.0 %)     protein-export protein SECB (secB) {Rickettsia prowazekii}
3048.1  1.1      66 % (Q:100.0 %/S: 98.5 %)     secretion protein (secE) {EDTA-degrading bacterium BNC1}
847.1   1.1      84 % (Q:102.1 %/S:100.4 %)     signal recognition particle protein (ffh) {Bacillus subtilis}

14.8. CELLULAR PROCESSES/TYPE I PROTEIN SECRETION (4 genes)

1573.1  3.1      31 % (Q: 97.1 %/S:111.3 %)     autotransporter protein (bapA) {Bordetella pertussis}
2630.1  1.1      69 % (Q: 97.1 %/S: 93.2 %)     SEC-independent protein translocase protein (tatA) {Helicobacter pylori (strain 26695)}
2631.1  1.1      34 % (Q: 77.7 %/S: 96.0 %)     SEC-independent protein translocase protein (tatB) {Vibrio cholerae (group O1 strain N16961)}
2632.1  1.1      72 % (Q: 98.5 %/S: 90.4 %)     SEC-independent protein translocase protein (tatC) {Pseudomonas aeruginosa}

14.9. CELLULAR PROCESSES/TYPE II PROTEIN SECRETION (2 genes)

3571.1  1.1      46 % (Q: 91.1 %/S: 87.6 %)     PilQ {}
3430.1  1.1      60 % (Q: 98.3 %/S:102.7 %)     preprotein tranlocase protein (yajC) {Sinorhizobium meliloti}

14.13. CELLULAR PROCESSES/CHEMOTAXIS AND MOBILITY (62 genes)

1797.1  1.1      99 % (Q:100.0 %/S:100.0 %)     cheA homolog (cheA) {Agrobacterium tumefaciens}
1313.1  1.1      63 % (Q: 63.0 %/S: 60.0 %)     chemotaxis methyl-accepting protein (mcpG) {Rhizobium leguminosarum}
1796.1  1.1     100 % (Q:100.0 %/S:100.0 %)     chemotaxis methyltransferase (CheR) {Agrobacterium tumefaciens}
2252.1  1.1      28 % (Q: 98.2 %/S: 92.8 %)     chemotaxis MotD protein (motD) {Sinorhizobium meliloti}
455.1   1.1      93 % (Q: 99.4 %/S:100.0 %)     chemotaxis protein (cheW) {Sinorhizobium meliloti}
1793.1  1.1     100 % (Q:100.0 %/S:100.0 %)     chemotaxis protein (cheD) {Agrobacterium tumefaciens C58}
2251.1  1.1      49 % (Q:100.0 %/S: 97.7 %)     Chemotaxis protein (xxxX) {Sinorhizobium meliloti}
4297.1  1.1      49 % (Q: 95.1 %/S:100.6 %)     chemotaxis protein (cheW) {Rhizobium meliloti}
2242.1  1.1     100 % (Q:100.0 %/S:100.0 %)     chemotaxis transmembrane protein (motA) {Agrobacterium tumefaciens}
1794.1  1.1     100 % (Q:100.0 %/S:100.0 %)     CheY homolog (cheY2) {Agrobacterium tumefaciens}
1798.1  1.1     100 % (Q:100.0 %/S:100.0 %)     cheY homolog (cheY1) {Agrobacterium tumefaciens}
1777.1  1.1     100 % (Q:100.0 %/S:100.0 %)     flaB (flaB) {Agrobacterium tumefaciens}
2258.1  1.1      69 % (Q:100.9 %/S:100.0 %)     FLAF protein (flaF) {Caulobacter crescentus}
1776.1  1.1     100 % (Q:100.0 %/S:100.0 %)     flagella associated protein (flaA) {Agrobacterium tumefaciens}
2240.1  1.1     100 % (Q:100.0 %/S:100.0 %)     flagellar basal body rod protein (flgF) {Agrobacterium tumefaciens}
2234.1  1.1      95 % (Q:100.0 %/S:100.0 %)     flagellar basal-body rod protein (flgG) {Agrobacterium tumefaciens}
2236.1  1.1      97 % (Q:100.0 %/S:100.0 %)     flagellar basal-body rod protein (flgC) {Agrobacterium tumefaciens}
2237.1  1.1      99 % (Q:100.0 %/S: 97.0 %)     flagellar basal-body rod protein FlgB (flgB) {Agrobacterium tumefaciens}
2262.1  1.1      73 % (Q: 99.0 %/S: 99.0 %)     flagellar biosynthesis protein (flhA) {Sinorhizobium meliloti}
1775.1  1.1     100 % (Q:100.0 %/S:100.0 %)     flagellar biosynthetic protein (fliP) {Agrobacterium tumefaciens}
2246.1  1.1     100 % (Q:100.0 %/S:100.0 %)     flagellar biosynthetic protein (flhB) {Agrobacterium tumefaciens}
2261.1  1.1      79 % (Q:100.0 %/S:100.0 %)     flagellar biosynthetic protein (fliQ) {Caulobacter crescentus}
2263.1  1.1      43 % (Q: 95.2 %/S: 95.6 %)     flagellar biosynthetic protein FLIR (fliR) {Caulobacter crescentus}
2255.1  1.1      53 % (Q:100.5 %/S:102.2 %)     flagellar hook protein (flgE) {Brucella melitensis}
2257.1  1.1      42 % (Q:100.5 %/S:107.0 %)     flagellar hook-associated protein (flgL) {Sinorhizobium meliloti}
2235.1  1.1     100 % (Q:100.0 %/S:100.0 %)     flagellar hook-basal body complex protein (fliE) {Agrobacterium tumefaciens}
1773.1  1.1     100 % (Q:100.0 %/S:100.0 %)     flagellar L-ring protein precursor (flgH) {Agrobacterium tumefaciens}
1791.1  1.1      71 % (Q:100.0 %/S:100.5 %)     flagellar M-ring protein (fliF) {Sinorhizobium meliloti}
4457.1  2.1      68 % (Q:100.0 %/S: 79.6 %)     flagellar motor protein (motB) {Pseudomonas aeruginosa}
2250.1  1.1      57 % (Q: 99.1 %/S:108.9 %)     flagellar motor protein, PAL/OmpA family (motB) {Sinorhizobium meliloti}
2243.1  1.1      99 % (Q:100.0 %/S: 99.4 %)     flagellar motor switch protein (fliM) {Agrobacterium tumefaciens}
2245.1  1.1     100 % (Q: 91.6 %/S: 95.2 %)     flagellar motor switch protein FliG (fliG) {Agrobacterium tumefaciens}
2244.1  1.1     100 % (Q:100.0 %/S:100.0 %)     flagellar motor switch protein FliN (filN) {Agrobacterium tumefaciens}
1771.1  1.1     100 % (Q:100.0 %/S:100.0 %)     flagellar P-ring protein precursor (flgI) {Agrobacterium tumefaciens}
1774.1  1.1     100 % (Q:100.0 %/S:100.0 %)     flagellar protein (fliL) {Agrobacterium tumefaciens}
2233.1  1.1     100 % (Q:100.0 %/S:100.0 %)     flagellar protein FLGA precursor (flgA) {Agrobacterium tumefaciens}
1778.1  1.1     100 % (Q:100.0 %/S:100.0 %)     flagellin (fla) {Agrobacterium tumefaciens C58}
2248.1  1.1     100 % (Q:100.0 %/S:100.0 %)     flagellin protein FlaD (flaD) {Agrobacterium tumefaciens}
2239.1  1.1     100 % (Q:100.0 %/S:100.0 %)     flagellum-specific ATP synthase (fliI) {Agrobacterium tumefaciens}
2259.1  1.1      85 % (Q:100.0 %/S:100.0 %)     FLBT protein (flbT) {Caulobacter crescentus}
2256.1  1.1      50 % (Q:100.0 %/S:104.2 %)     hook associated protein I homolog (flgK) {Caulobacter crescentus}
2260.1  1.1      58 % (Q: 86.6 %/S: 98.6 %)     hook formation protein (flgD) {Sinorhizobium meliloti}
184.1   4.1      99 % (Q: 99.1 %/S:100.0 %)     methyl-accepting chemotaxis protein (mcpA) {Agrobacterium tumefaciens C58}
930.1   1.1      49 % (Q: 97.1 %/S: 96.6 %)     methyl-accepting chemotaxis protein (mcpA) {Agrobacterium tumefaciens}
1388.1  1.1      50 % (Q: 80.5 %/S: 82.8 %)     methyl-accepting chemotaxis protein (mcpC) {Rhizobium leguminosarum}
1679.1  1.1      51 % (Q: 96.8 %/S: 89.9 %)     methyl-accepting chemotaxis protein (mcpV) {Sinorhizobium meliloti}
1788.1  1.1      61 % (Q: 54.9 %/S: 53.0 %)     methyl-accepting chemotaxis protein (mclA) {Agrobacterium tumefaciens}
1800.1  1.1     100 % (Q:100.0 %/S:100.0 %)     methyl-accepting chemotaxis protein (xxxX) {Agrobacterium tumefaciens}
1943.1  3.1      68 % (Q: 65.8 %/S: 60.1 %)     methyl-accepting chemotaxis protein (xxxX) {Rhizobium leguminosarum}
2036.1  1.1      65 % (Q:100.2 %/S:100.2 %)     methyl-accepting chemotaxis protein (mclA) {Sinorhizobium meliloti}
2078.1  2.1      41 % (Q: 97.9 %/S: 99.0 %)     methyl-accepting chemotaxis protein (mclA) {Rhizobium leguminosarum}
2763.1  1.1      61 % (Q:100.0 %/S:102.6 %)     methyl-accepting chemotaxis protein (mcpA) {Rhizobium leguminosarum}
2773.1  1.1      64 % (Q: 99.6 %/S:100.3 %)     methyl-accepting chemotaxis protein (xxxX) {Caulobacter crescentus}
2829.1  1.1      68 % (Q: 99.6 %/S: 99.9 %)     methyl-accepting chemotaxis protein (mcpA) {Pseudomonas aeruginosa}
3274.1  1.1      63 % (Q: 63.9 %/S: 58.7 %)     methyl-accepting chemotaxis protein (mcpA) {Agrobacterium rhizogenes}
4298.1  1.1      63 % (Q:100.5 %/S:100.0 %)     methyl-accepting chemotaxis protein (cheD) {Agrobacterium tumefaciens}
4440.1  2.1      34 % (Q: 96.5 %/S: 99.5 %)     methyl-accepting chemotaxis protein (xxxX) {Rhizobium rhizogenes}
4561.1  2.1      80 % (Q: 95.5 %/S: 98.8 %)     methyl-accepting chemotaxis protein (mcpA) {Agrobacterium tumefaciens}
4744.1  2.1      65 % (Q: 63.1 %/S: 58.1 %)     methyl-accepting chemotaxis protein (xxxX) {Rhizobium leguminosarum}
1634.1  1.1      43 % (Q: 97.5 %/S: 98.0 %)     methyl-accepting chemotaxis protein A (mcpA) {Rhodobacter capsulatus}
1795.1  1.1     100 % (Q:100.0 %/S:100.0 %)     protein-glutamate methylesterase (cheB) {Agrobacterium tumefaciens}
2109.1  2.1      57 % (Q: 93.4 %/S: 94.1 %)     sensory methylation accepting chemotaxis protein (xxxX) {Agrobacterium tumefaciens}

14.99. CELLULAR PROCESSES/OTHER (8 genes)

3778.1  2.1      89 % (Q:100.0 %/S:100.0 %)     alkanal monooxygenase alpha chain (xxxX) {Rhizobium sp}
4380.1  2.1      61 % (Q: 85.4 %/S: 94.0 %)     antioxidant enzyme (xxxX) {Bradyrhizobium japonicum}
2035.1  1.1      82 % (Q: 98.6 %/S: 99.3 %)     ATPase, AAA family protein (xxxX) {Pseudomonas aeruginosa}
1676.1  1.1      83 % (Q:100.1 %/S:100.5 %)     GTP pyrophosphohydrolases/synthetases, RelA/SpoT family (xxxX) {Bradyrhizobium japonicum}
3323.1  1.1      76 % (Q: 92.7 %/S: 95.9 %)     GTP-binding protein (cgtA) {Caulobacter vibrioides}
97.1    1.1      66 % (Q: 99.6 %/S: 99.5 %)     metal dependent hydrolase (xxxX) {Mesorhizobium loti}
2740.1  1.1      73 % (Q:100.0 %/S:100.0 %)     stress induced protein (xxxX) {Pseudomonas aeruginosa}
1453.1  4.1      33 % (Q: 98.9 %/S: 90.7 %)     Zn-dependent hydrolases (attM) {Halobacterium sp. NRC-1}

15.1. OTHER CATEGORIES/ADAPTATIONS AND ATYPICAL CONDITIONS (21 genes)

2528.1  2.1      43 % (Q:104.1 %/S: 98.8 %)     3,4-dihydroxy-2-butanone kinase (dhbK) {Lycopersicon esculentum}
1290.1  1.1      34 % (Q: 95.1 %/S: 15.2 %)     ankyrin repeat protein (xxxX) {Drosophila melanogaster}
3228.1  1.1      59 % (Q: 96.1 %/S: 87.4 %)     bacteroid development protein (bacA) {Sinorhizobium meliloti}
1748.1  1.1      83 % (Q:100.0 %/S:100.0 %)     BolA/YrbA family protein (xxxX) {Caulobacter crescentus}
3151.1  1.1      69 % (Q:100.0 %/S: 99.5 %)     carbonate dehydratase (cah) {Campylobacter jejuni}
3375.1  2.1      74 % (Q:100.4 %/S: 99.2 %)     choline sulfatase (betC) {Sinorhizobium meliloti}
3143.1  1.1      55 % (Q: 95.1 %/S: 92.2 %)     DNA-binding protein (dps) {Escherichia coli}
4459.1  2.1      49 % (Q: 86.0 %/S: 81.5 %)     enhanced entry protein (enhC) {Vogesella indigofera}
4418.1  2.1      62 % (Q: 91.7 %/S: 99.1 %)     glutathione S-transferase (xxxX) {Pseudomonas aeruginosa}
3163.1  1.1      45 % (Q: 90.6 %/S: 92.9 %)     heme oxygenase (hemO) {Pseudomonas aeruginosa}
3123.1  1.1      36 % (Q: 86.9 %/S: 87.4 %)     iron-chelator utilization protein (xxxX) {Stigmatella aurantiaca}
3448.1  1.1      55 % (Q: 95.2 %/S: 90.5 %)     lipid A biosynthesis lauroyl acyltransferase (msbB) {Rickettsia prowazekii}
4712.1  2.1      46 % (Q: 87.5 %/S: 92.6 %)     oxalate decarboxylase (xxxX) {Bacillus subtilis}
2176.1  1.1      75 % (Q: 93.6 %/S: 90.5 %)     phosphate starvation inducible protein (phoH) {Bacillus subtilis}
3426.1  1.1      50 % (Q: 98.2 %/S: 91.7 %)     phytoene synthase (crtB) {Arabidopsis thaliana}
1583.1  3.1      33 % (Q: 84.9 %/S: 82.8 %)     pirin-like protein (pirA) {Lycopersicon esculentum}
4399.1  2.1      44 % (Q: 93.9 %/S: 13.2 %)     polyketide synthase and peptide synthetase (mcyE) {Microcystis aeruginosa}
4347.1  1.1      51 % (Q: 93.7 %/S: 87.6 %)     protein tyrosine phosphatase (xxxX) {Pseudomonas aeruginosa}
2634.1  1.1      74 % (Q: 98.8 %/S: 98.8 %)     stationary-phase survival protein (surE) {Sinorhizobium meliloti}
1236.1  2.1      69 % (Q:100.0 %/S:100.0 %)     stress induced morphogen (bolA) {Pseudomonas denitrificans}
1294.1  1.1      63 % (Q: 96.4 %/S: 96.9 %)     UDP-glucose:ceramide glycosyltransferase (ugcG) {Drosophila melanogaster}

15.2. OTHER CATEGORIES/PHAGE-RELATED FUNCTIONS AND PROPHAGES (12 genes)

634.1   1.1      63 % (Q:100.0 %/S:101.9 %)     bacteriophage repressor protein C1 (c1) {Bacteriophage APSE-1}
994.1   1.1      38 % (Q:101.0 %/S: 98.6 %)     DNA-directed RNA polymerase (xxxX) {Bacteriophage T3}
790.1   1.1      60 % (Q: 57.7 %/S: 98.4 %)     endolysin (xxxX) {Bacteriophage P27}
702.1   1.1      51 % (Q: 96.1 %/S:100.3 %)     large terminase (xxxX) {Rhodobacter capsulatus}
699.1   1.1      52 % (Q: 96.4 %/S: 84.6 %)     phage head portal protein (gp34) {Rhodobacter capsulatus}
463.1   1.1      54 % (Q: 92.3 %/S: 98.8 %)     phage phi-C31 major capsid gp36-like protein (gp36) {Caulobacter crescentus}
462.1   1.1      45 % (Q: 96.8 %/S:100.0 %)     phage prohead protease (gp35) {Rhodobacter capsulatus}
990.1   1.1      31 % (Q: 84.0 %/S: 90.8 %)     phage-related integrase (int) {Pseudomonas aeruginosa}
2718.1  1.1      29 % (Q: 95.9 %/S: 95.6 %)     phage-related integrase (intD) {bacteriophage P22}
3650.1  2.1      54 % (Q: 97.7 %/S: 97.2 %)     phage-related integrase (int) {Rhodobacter capsulatus}
3967.1  3.1      65 % (Q:101.2 %/S: 90.9 %)     phage-related integrase (intX) {Coxiella burnetii}
993.1   1.1      32 % (Q: 57.0 %/S: 40.5 %)     tail fiber protein fragment [N-terminal] (xxxX*) {Bacteriophage T7}

15.3. OTHER CATEGORIES/TRANSPOSON-RELATED FUNCTIONS (35 genes)

3957.1  3.1      91 % (Q: 92.9 %/S: 62.2 %)     IS 426 transposase (orf2) {Agrobacterium tumefaciens T37}
11056.1 2.1      98 % (Q:100.0 %/S: 93.0 %)     IS 426 transposase {}
4639.1  2.1      32 % (Q: 90.8 %/S: 87.3 %)     IS21 family transposase (istA) {Ralstonia eutropha}
4640.1  2.1      40 % (Q: 93.3 %/S: 88.3 %)     IS21 family transposase (istB) {Mycobacterium bovis}
7052.1  3.1      33 % (Q: 72.2 %/S: 15.1 %)     IS21 family transposase fragment {}
747.3   3.1      66 % (Q: 97.3 %/S: 14.0 %)     IS3 family transposase {}
2440.1  2.1      53 % (Q:100.0 %/S: 99.6 %)     IS3 family transposase (tnp) {Plasmid R100 of Shigella flexneri 2b strain 222}
3415.1  2.1      77 % (Q:100.0 %/S:100.3 %)     IS3 family transposase (orfB) {Caulobacter crescentus}
3416.1  2.1      66 % (Q: 90.4 %/S: 86.6 %)     IS3 family transposase (orfA) {Bradyrhizobium japonicum}
3898.1  3.1      66 % (Q: 97.3 %/S: 14.0 %)     IS3 family transposase (tnp) {Plasmid R100}
6275.1  2.1      70 % (Q:100.0 %/S:100.0 %)     IS3 family transposase {}
10041.1 1.1      53 % (Q:100.0 %/S: 99.6 %)     IS3 family transposase {}
1919.1  3.1      70 % (Q: 54.5 %/S: 53.2 %)     IS30 family transposase (tnp) {Rhizobium rhizogenes}
1920.1  1.1      74 % (Q: 99.2 %/S: 76.9 %)     IS30 family transposase (tnp) {Rhizobium rhizogenes}
3419.1  2.1     100 % (Q:100.0 %/S:100.0 %)     IS426 transposase (orfB) {Agrobacterium tumefaciens T37}
3955.1  3.1      88 % (Q:103.2 %/S:100.0 %)     IS426 transposase (orf1) {Agrobacterium tumefaciens}
4625.1  2.1      99 % (Q:100.0 %/S:100.0 %)     IS426 transposase (orfA) {Agrobacterium tumefaciens}
4626.1  2.1      99 % (Q:100.4 %/S:100.0 %)     IS426 transposase (orfB) {Agrobacterium tumefaciens T37}
3983.1  2.1      35 % (Q: 99.7 %/S: 95.6 %)     IS5 family transposase (tnp) {Sphingomonas sp. LB126}
3899.1  3.1      61 % (Q: 83.3 %/S: 42.8 %)     IS5 family transposase fragment [N-terminal] (tnp*) {Bacillus anthracis virulence plasmid pXO1}
1566.1  3.1      49 % (Q: 94.7 %/S: 92.3 %)     IS66 family orf2 (orf2) {Bradyrhizobium japonicum}
1565.1  3.1      70 % (Q: 95.3 %/S: 41.4 %)     IS66 family Orf4 fragment (orf4*) {Rhizobium sp. NGR234}
3897.1  3.1      38 % (Q: 92.1 %/S: 91.4 %)     ISL3 family transposase (tnpA) {Streptomyces coelicolor}
3943.1  3.1      46 % (Q:100.0 %/S: 99.8 %)     recombinase (xxxX) {Staphylococcus aureus}
3947.1  3.1      44 % (Q: 78.6 %/S: 11.1 %)     Tn3 family transposase (tnp) {Rhizobium leguminosarum}
2442.1  3.1      45 % (Q: 98.8 %/S: 50.2 %)     Tn3 family transposase fragment (orf1*) {Pseudomonas aeruginosa}
1564.1  3.1      83 % (Q:100.0 %/S:100.0 %)     transposase (tnp) {Erwinia herbicola}
2917.1  4.1      99 % (Q:100.0 %/S:100.0 %)     transposase (tnp) {Agrobacterium tumefaciens C58}
2920.1  4.1     100 % (Q:100.0 %/S:100.0 %)     transposase (tnp) {Agrobacterium tumefaciens SAKURA}
3409.1  2.1      48 % (Q: 61.5 %/S: 34.8 %)     transposase (tnp) {Mesorhizobium loti}
4489.1  2.1      47 % (Q: 74.1 %/S: 38.8 %)     transposase (tnp) {Mesorhizobium loti}
4490.1  2.1      49 % (Q: 83.5 %/S: 41.7 %)     transposase (tnp) {Mesorhizobium loti}
4491.1  2.1      88 % (Q: 60.3 %/S: 36.7 %)     transposase {}
4621.1  2.1      87 % (Q: 79.6 %/S: 75.1 %)     transposase (tnp) {Rhizobium sp.strain NGR234}
7007.1  3.1      78 % (Q: 97.9 %/S: 95.9 %)     transposase {}

15.4. OTHER CATEGORIES/PLASMID-RELATED FUNCTIONS (51 genes)

4642.1  2.1      34 % (Q: 89.7 %/S: 73.2 %)     agrobacteirum virulence homologue virD4 (avhD4) {Rickettsia prowazekii}
3836.1  3.1      45 % (Q:101.9 %/S: 74.0 %)     agrobacterium virulence homologue virB1 (avhB1) {Xenopus laevis}
1609.1  3.1      77 % (Q:100.0 %/S:100.0 %)     agrobacterium virulence homologue virB10 (avhB10) {xxxx}
1608.1  3.1      75 % (Q: 97.9 %/S:100.0 %)     agrobacterium virulence homologue virB11 (avhB11) {Bartonella henselae}
3835.1  3.1      90 % (Q:100.0 %/S:100.0 %)     agrobacterium virulence homologue virB2 (avhB2) {Bartonella henselae}
3834.1  3.1      80 % (Q: 81.4 %/S:100.0 %)     agrobacterium virulence homologue VirB3 (avhB3) {Bartonella henselae}
3833.1  3.1      86 % (Q:100.0 %/S: 95.6 %)     agrobacterium virulence homologue virB4 (avhB4) {Bartonella henselae}
3832.1  3.1      85 % (Q: 87.5 %/S: 99.0 %)     agrobacterium virulence homologue VirB5 (avhB5) {Xylella fastidiosa}
3831.1  3.1      81 % (Q: 99.7 %/S: 99.0 %)     agrobacterium virulence homologue VirB6 (avhB6) {Bartonella henselae}
3830.1  3.1      61 % (Q: 81.8 %/S:100.0 %)     agrobacterium virulence homologue virB7 (avhB7) {xxxx}
1612.1  3.1      83 % (Q: 99.6 %/S: 99.6 %)     agrobacterium virulence homologue virB8 {}
1610.1  3.1      84 % (Q: 98.6 %/S: 98.2 %)     agrobacterium virulence homologue virB9 (avhB9) {Bartonella henselae}
3889.1  3.1      78 % (Q: 96.1 %/S: 96.4 %)     antirestriction protein (ardC) {IncW plasmid pSa}
74.1    4.1      91 % (Q:101.9 %/S: 93.6 %)     chromosome partitioning protein (parB) {Agrobacterium tumefaciens SAKURA}
1977.1  1.1      75 % (Q: 98.5 %/S: 97.7 %)     chromosome partitioning protein (parA) {Caulobacter crescentus}
1978.1  1.1      62 % (Q:101.0 %/S:100.3 %)     chromosome Partitioning Protein (ParB) {Caulobacter crescentus}
2798.1  1.1      34 % (Q: 93.3 %/S:100.0 %)     chromosome partitioning protein (ParA) {Agrobacterium tumefaciens}
65.1    4.1     100 % (Q:100.0 %/S:100.0 %)     conjugal transfer protein {}
66.1    4.1     100 % (Q:100.0 %/S:100.0 %)     conjugal transfer protein (trbJ) {Agrobacterium tumefaciens SAKURA}
68.1    4.1     100 % (Q:100.0 %/S:100.0 %)     conjugal transfer protein (trbL) {Agrobacterium tumefaciens SAKURA}
69.1    4.1     100 % (Q:100.0 %/S:100.0 %)     conjugal transfer protein (trbF) {Agrobacterium tumefaciens SAKURA}
70.1    4.1     100 % (Q:100.0 %/S: 98.6 %)     conjugal transfer protein (trbG) {Agrobacterium tumefaciens pTiC58}
71.1    4.1     100 % (Q:100.0 %/S:100.0 %)     conjugal transfer protein (trbH) {Agrobacterium tumefaciens pTiC58}
214.1   4.1     100 % (Q:100.0 %/S:100.0 %)     conjugal transfer protein (trbI) {Agrobacterium tumefaciens C58}
574.1   4.1     100 % (Q:100.0 %/S:100.0 %)     conjugal transfer protein (trbD) {Agrobacterium tumefaciens}
575.1   4.1     100 % (Q:100.0 %/S:100.0 %)     conjugal transfer protein (trbC) {Agrobacterium tumefaciens}
576.1   4.1     100 % (Q:100.0 %/S:100.0 %)     conjugal transfer protein (trbB) {Agrobacterium tumefaciens}
3882.1  3.1      78 % (Q: 99.7 %/S: 99.9 %)     conjugal transfer protein (traA) {Agrobacterium tumefaciens}
3883.1  3.1      69 % (Q: 98.9 %/S: 98.9 %)     conjugal transfer protein (traC) {Agrobacterium rhizogenes}
3884.1  3.1      67 % (Q: 88.3 %/S: 86.1 %)     conjugal transfer protein (traD) {Agrobacterium tumefaciens}
3885.1  3.1      43 % (Q: 86.9 %/S: 84.3 %)     conjugal transfer protein (traG) {Agrobacterium tumefaciens pTiC58}
176.1   4.1     100 % (Q:100.0 %/S:100.0 %)     conjugal transfer protein, Dtr system (traG) {Agrobacterium tumefaciens}
177.1   4.1      87 % (Q:100.0 %/S:100.0 %)     conjugal transfer protein, Dtr system (traD) {Agrobacterium tumefaciens}
178.1   4.1     100 % (Q:100.0 %/S:100.0 %)     conjugal transfer protein, Dtr system (traC) {Agrobacterium tumefaciens}
179.1   4.1      99 % (Q:100.1 %/S:100.0 %)     conjugal transfer protein, Dtr system (traA) {Agrobacterium tumefaciens}
180.1   4.1     100 % (Q:100.0 %/S:100.0 %)     conjugal transfer protein, Dtr system (traF) {Agrobacterium tumefaciens}
181.1   4.1      99 % (Q:100.0 %/S: 92.9 %)     conjugal transfer protein, Dtr system (traB) {Agrobacterium tumefaciens}
182.1   4.1     100 % (Q:100.0 %/S:100.0 %)     conjugal transfer protein, Dtr system (traH) {Agrobacterium tumefaciens pTiC58}
4645.1  2.1      37 % (Q: 96.0 %/S:101.8 %)     conjugation protein (traA) {Agrobacterium tumefaciens}
67.1    4.1     100 % (Q:100.0 %/S:100.0 %)     entry-exclusion protein (trbK) {Agrobacterium tumefaciens pTiC58}
4643.1  2.1      34 % (Q: 67.6 %/S: 79.8 %)     mobilization protein C (mobC) {Plasmid RSF1010}
4644.1  2.1      56 % (Q: 90.9 %/S: 98.2 %)     nucleotidyltransferase (xxxX) {Bacillus anthracis}
3944.1  3.1      29 % (Q: 61.7 %/S: 84.7 %)     partitioning protein (parB) {Thermus thermophilus}
3968.1  3.1      77 % (Q:100.0 %/S:100.0 %)     plasmid stabilization protein (stbB) {xylella fastidiosa}
581.1   4.1     100 % (Q:100.0 %/S:100.0 %)     replication intiator protein (repC) {Agrobacterium tumefaciens}
580.1   4.1     100 % (Q: 90.8 %/S:100.0 %)     replication protein {}
436.1   3.1      92 % (Q: 83.7 %/S: 95.3 %)     replication protein A (repA) {Agrobacterium tumefaciens}
578.1   4.1     100 % (Q:100.0 %/S:100.0 %)     replication protein A (repA) {Agrobacterium tumefaciens SAKURA}
437.1   3.1     100 % (Q: 74.6 %/S: 73.8 %)     replication protein B (repB) {Agrobacterium tumefaciens C58}
438.1   3.1      91 % (Q:100.2 %/S:100.7 %)     replication protein C (repC) {Agrobacterium tumefaciens C58}
3663.1  2.1      52 % (Q: 94.8 %/S: 94.3 %)     resolvase (parA) {Plasmid pM3}

15.99. OTHER CATEGORIES/OTHER (1 genes)

1939.1  3.1      75 % (Q: 92.0 %/S: 96.2 %)     cultivar specificity protein W78 (xxxX) {Rhizobium leguminosarum}

16.2. HYPOTHETICAL/CONSERVED HYPOTHETICAL (1217 genes)

3714.1  2.1      52 % (Q: 92.0 %/S: 98.4 %)     conserved hypothetical (xxxX) {Bacillus subtilis}
36.1    4.1      96 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens SAKURA}
53.1    1.1      52 % (Q: 60.4 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
61.1    2.1      44 % (Q: 80.0 %/S: 94.5 %)     conserved hypothetical protein (xxxX) {xxx}
63.1    2.1      66 % (Q: 99.1 %/S: 98.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
64.1    2.1      47 % (Q:100.5 %/S: 98.6 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
75.1    4.1      84 % (Q: 80.3 %/S: 82.9 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
76.1    4.1      61 % (Q: 96.9 %/S: 96.9 %)     conserved hypothetical protein (xxxX) {Rhizobium rhizogenes pRi1724}
79.1    1.1      33 % (Q: 50.0 %/S: 62.6 %)     conserved hypothetical protein {}
80.1    1.1      75 % (Q: 97.1 %/S: 95.7 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
81.1    1.1      44 % (Q:101.4 %/S: 98.6 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
89.1    1.1      61 % (Q:100.0 %/S: 96.3 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
100.1   1.1      29 % (Q: 89.1 %/S: 72.2 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
104.1   2.1      43 % (Q:106.4 %/S:102.2 %)     conserved hypothetical protein (xxxX) {Ralstonia solanacearum}
105.1   2.1      42 % (Q: 98.6 %/S: 92.9 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
111.1   1.1      33 % (Q: 83.7 %/S:  9.3 %)     conserved hypothetical protein {}
112.1   1.1      62 % (Q:100.5 %/S: 98.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
117.1   4.1      99 % (Q: 95.8 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens SAKURA}
120.1   4.1      97 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens SAKURA}
130.1   1.1      38 % (Q:106.2 %/S:101.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas denitrificans}
140.1   4.1      62 % (Q: 95.5 %/S: 94.7 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens SAKURA}
142.1   4.1      81 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (ych) {Agrobacterium tumefaciens}
144.1   4.1      92 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (tiorf76) {Agrobacterium tumefaciens}
146.1   4.1      71 % (Q: 99.6 %/S:100.0 %)     conserved hypothetical protein (ycf) {Agrobacterium tumefaciens}
147.1   4.1      83 % (Q: 99.6 %/S: 99.8 %)     conserved hypothetical protein (apeA) {Agrobacterium tumefaciens}
148.1   4.1      30 % (Q: 85.0 %/S: 88.8 %)     conserved hypothetical protein (xxxX) {Mycobacterium tuberculosis}
149.1   4.1      91 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
150.1   4.1      90 % (Q:100.0 %/S: 97.4 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens SAKURA}
153.1   1.1      66 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Rhizobium sp. NGR234}
154.1   1.1      70 % (Q: 96.3 %/S: 96.3 %)     conserved hypothetical protein (xxxX) {Rhizobium sp. NGR234}
155.1   1.1      34 % (Q: 98.4 %/S: 92.3 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
157.1   1.1      57 % (Q: 99.6 %/S:105.8 %)     conserved hypothetical protein (xxxX) {Rhizobium leguminosarum bv. viciae}
160.1   1.1      50 % (Q: 89.8 %/S: 92.2 %)     conserved hypothetical protein {}
161.1   1.1      29 % (Q: 82.5 %/S: 75.3 %)     conserved hypothetical protein (xxxX) {Arabidopsis thaliana}
162.1   1.1      37 % (Q: 96.7 %/S: 93.1 %)     conserved hypothetical protein (xxxX) {Archaeoglobus fulgidus}
163.1   1.1      44 % (Q: 98.5 %/S: 99.0 %)     conserved hypothetical protein (xxxX) {Archaeoglobus fulgidus}
167.1   1.1      34 % (Q: 17.6 %/S: 10.3 %)     conserved hypothetical protein (xxxX) {Aquifex aeolicus}
174.1   1.1      43 % (Q: 96.5 %/S: 95.8 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
187.1   1.1      31 % (Q: 89.9 %/S: 90.2 %)     conserved hypothetical protein (xxxX) {Desulfovibrio gigas}
198.1   1.1      57 % (Q:100.0 %/S: 99.3 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
200.1   1.1      56 % (Q: 99.2 %/S: 96.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
201.1   1.1      37 % (Q: 35.4 %/S: 16.1 %)     conserved hypothetical protein (xxxX) {Porphyromonas gingivalis}
202.1   1.1      47 % (Q: 96.9 %/S: 95.4 %)     conserved hypothetical protein (xxxX) {Mycobacterium tuberculosis}
206.1   1.1      67 % (Q:100.6 %/S:101.6 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
226.1   1.1      57 % (Q: 98.3 %/S: 95.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
228.1   1.1      57 % (Q:102.6 %/S: 98.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
229.1   1.1      66 % (Q: 98.7 %/S: 95.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
230.1   1.1      50 % (Q: 75.2 %/S: 86.8 %)     conserved hypothetical protein (xxxX) {Neisseria gonorrhoeae}
241.1   1.1      66 % (Q: 99.1 %/S: 99.7 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
242.1   1.1      52 % (Q: 89.6 %/S: 89.0 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3-2}
243.1   1.1      51 % (Q: 94.9 %/S: 93.5 %)     conserved hypothetical protein {}
245.1   1.1      87 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Caulobacter vibrioides}
246.1   1.1      48 % (Q: 98.9 %/S: 92.9 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
249.1   1.1      26 % (Q:101.4 %/S:105.4 %)     conserved hypothetical protein (xxxX) {Synechocystis sp. PCC 6803}
250.1   1.1      36 % (Q: 97.7 %/S: 95.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
251.1   1.1      64 % (Q: 94.9 %/S: 97.6 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
252.1   1.1      65 % (Q: 89.8 %/S: 84.6 %)     conserved hypothetical protein (xxxX) {Thermus brockianus}
253.1   1.1      25 % (Q: 95.6 %/S:108.6 %)     conserved hypothetical protein (xxxX) {Leishmania major}
260.1   3.1      33 % (Q: 94.9 %/S: 91.1 %)     conserved hypothetical protein (xxxX) {Halobacterium sp. NRC-1}
279.1   3.1      32 % (Q: 26.9 %/S: 31.0 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3-2}
296.1   1.1      60 % (Q: 99.5 %/S: 99.2 %)     conserved hypothetical protein (phnM) {Pseudomonas aeruginosa}
297.1   1.1      47 % (Q:101.7 %/S: 99.1 %)     conserved hypothetical protein {}
300.1   1.1      33 % (Q:101.9 %/S: 93.7 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
305.1   1.1      63 % (Q: 89.0 %/S: 89.6 %)     conserved hypothetical protein (xxxX) {Hydrogenophilus thermoluteolus}
315.1   1.1      59 % (Q:100.0 %/S:101.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
316.1   1.1      69 % (Q:100.0 %/S: 99.8 %)     conserved hypothetical protein (xxxX) {Agrobacterium vitis pTrAB3}
317.1   1.1      31 % (Q: 92.2 %/S: 91.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium vitis}
318.1   1.1      57 % (Q: 97.8 %/S: 38.4 %)     conserved hypothetical protein (xxxX) {Agrobacterium vitis pTrAB3}
322.1   1.1      40 % (Q:101.7 %/S: 96.7 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
332.1   2.1      55 % (Q: 94.7 %/S: 83.8 %)     conserved hypothetical protein (xxxX) {Rhizobium meliloti}
333.1   2.1      31 % (Q: 67.9 %/S:101.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
338.1   2.1      42 % (Q: 89.9 %/S: 96.8 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
352.1   1.1      32 % (Q: 70.6 %/S: 87.5 %)     conserved hypothetical protein (xxxX) {Piromyces equi}
355.1   1.1      69 % (Q: 97.6 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Rhizobium meliloti}
357.1   1.1      37 % (Q: 94.1 %/S: 44.0 %)     conserved hypothetical protein (xxxX) {Mus musculus}
358.1   1.1      44 % (Q: 96.4 %/S: 96.4 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
361.1   1.1      48 % (Q:100.0 %/S: 94.4 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
362.1   1.1      75 % (Q: 97.8 %/S: 95.6 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
369.1   1.1      56 % (Q: 78.2 %/S: 76.7 %)     conserved hypothetical protein (xxxX) {Bradyrhizobium japonicum}
370.1   1.1      40 % (Q: 98.7 %/S: 92.6 %)     conserved hypothetical protein (xxxX) {Brucella melitensis biovar Abortus}
377.1   1.1      41 % (Q: 51.1 %/S: 61.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
387.1   1.1      35 % (Q: 40.4 %/S: 22.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
398.1   1.1      46 % (Q: 90.7 %/S: 86.6 %)     conserved hypothetical protein (xxxX) {Sphingomonas sp. S88}
400.1   1.1      58 % (Q: 92.6 %/S: 96.6 %)     conserved hypothetical protein (xxxX) {Pseudomonas resinovorans}
402.1   1.1      60 % (Q:100.5 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
414.1   2.1      48 % (Q: 99.0 %/S:100.0 %)     conserved hypothetical protein (iolE) {Brucella melitensis biovar Abortus}
415.1   2.1      56 % (Q:100.4 %/S:100.4 %)     conserved hypothetical protein (iolB) {Rhizobium leguminosarum}
421.1   2.1      79 % (Q: 97.1 %/S: 83.7 %)     conserved hypothetical protein (cobW) {Arabidopsis thaliana}
422.1   2.1      62 % (Q:100.0 %/S:101.9 %)     conserved hypothetical protein (xxxX) {Myxococcus xanthus}
424.1   2.1      52 % (Q:110.6 %/S: 95.8 %)     conserved hypothetical protein (xxxX) {Haemophilus influenzae}
427.1   3.1      64 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Mycobacterium tuberculosis}
429.1   3.1      27 % (Q: 89.2 %/S: 86.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
431.1   3.1      52 % (Q: 97.6 %/S: 84.0 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
434.1   3.1      44 % (Q: 92.7 %/S: 84.8 %)     conserved hypothetical protein (xxxX) {xxx}
446.1   1.1      32 % (Q:101.4 %/S: 46.6 %)     conserved hypothetical protein (xxxX) {Lactococcus lactis subsp. lactis}
447.1   1.1      43 % (Q: 85.0 %/S: 56.4 %)     conserved hypothetical protein (xxxX) {Caenorhabditis elegans}
450.1   1.1      53 % (Q: 95.8 %/S: 95.0 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
451.1   1.1      48 % (Q: 90.1 %/S: 92.9 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
456.1   1.1      67 % (Q: 96.9 %/S: 91.9 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
470.1   1.1      43 % (Q: 49.6 %/S: 62.5 %)     conserved hypothetical protein (xxxX) {xxx}
471.1   1.1      39 % (Q: 66.1 %/S: 99.1 %)     conserved hypothetical protein (xxxX) {Caulobacter crescentus}
485.1   1.1      36 % (Q: 99.5 %/S: 86.9 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
486.1   1.1      37 % (Q: 71.7 %/S: 95.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
489.1   1.1      59 % (Q: 90.7 %/S: 84.1 %)     conserved hypothetical protein (xxxX) {Rhizobium leguminosarum bv. viciae}
490.1   1.1      63 % (Q: 58.3 %/S: 63.5 %)     conserved hypothetical protein (xxxX) {Rhizobium leguminosarum bv. viciae}
492.1   1.1      40 % (Q: 88.5 %/S: 88.5 %)     conserved hypothetical protein (xxxX) {Pasteurella multocida}
493.1   1.1      24 % (Q: 64.5 %/S: 32.5 %)     conserved hypothetical protein (xxxX) {Synechocystis sp}
495.1   1.1      73 % (Q:100.0 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Haemophilus influenzae Rd}
501.1   1.1      57 % (Q: 97.9 %/S: 97.3 %)     conserved hypothetical protein (xxxX) {Rhizobium etli}
509.1   2.1      69 % (Q: 95.3 %/S: 97.1 %)     conserved hypothetical protein (xxxX) {Escherichia coli K12}
514.1   2.1      37 % (Q: 96.4 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
516.1   2.1      43 % (Q: 98.1 %/S: 74.2 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
523.1   2.1      43 % (Q:103.7 %/S: 99.6 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
527.1   1.1      41 % (Q: 97.0 %/S: 98.2 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
528.1   1.1      65 % (Q:100.2 %/S:100.4 %)     conserved hypothetical protein (xxxX) {Yersinia enterocolitica}
529.1   1.1      53 % (Q: 95.5 %/S: 95.0 %)     conserved hypothetical protein (xxxX) {Pasteurella multocida}
530.1   1.1      54 % (Q: 85.5 %/S: 85.5 %)     conserved hypothetical protein (xxxX) {xxx}
534.1   1.1      44 % (Q: 97.6 %/S: 98.1 %)     conserved hypothetical protein (xxxX) {Synechocystis sp}
536.1   1.1      29 % (Q:103.3 %/S:104.8 %)     conserved hypothetical protein (xxxX) {Mesocricetus auratus}
539.1   1.1      60 % (Q: 99.2 %/S: 89.8 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
541.1   1.1      69 % (Q: 99.4 %/S: 92.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
545.1   2.1      27 % (Q:101.0 %/S:104.9 %)     conserved hypothetical protein (xxxX) {Escherichia coli K12}
558.1   1.1      53 % (Q: 96.2 %/S:100.9 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
560.1   1.1      66 % (Q: 97.6 %/S: 97.6 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
583.1   4.1      67 % (Q:100.5 %/S:100.3 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
584.1   4.1      31 % (Q: 97.1 %/S: 96.2 %)     conserved hypothetical protein (xxxX) {Lactococcus lactis}
586.1   4.1      97 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
587.1   4.1      96 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
588.1   4.1      98 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
589.1   4.1      93 % (Q: 59.7 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
590.1   4.1      93 % (Q: 97.7 %/S: 97.7 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
598.1   1.1      47 % (Q: 87.9 %/S:104.1 %)     conserved hypothetical protein (xxxX) {Brucella melitensis biovar Abortus}
599.1   1.1      48 % (Q:103.9 %/S:108.2 %)     conserved hypothetical protein (xxxX) {Brucella melitensis biovar Abortus}
603.1   1.1      63 % (Q: 95.7 %/S: 95.1 %)     conserved hypothetical protein (xxxX) {Thermobifida fusca}
605.1   1.1      28 % (Q: 58.0 %/S: 65.2 %)     conserved hypothetical protein (xxxX) {Haemophilus influenzae (strain Rd KW20)}
606.1   1.1      72 % (Q: 96.5 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Brucella melitensis}
614.1   1.1      50 % (Q:100.0 %/S: 99.7 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
620.1   1.1      32 % (Q:112.0 %/S:102.8 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis}
621.1   1.1      70 % (Q: 99.4 %/S: 99.7 %)     conserved hypothetical protein (xxxX) {Halobacterium sp. NRC-1}
622.1   1.1      32 % (Q: 98.6 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Halobacterium NRC-1}
623.1   1.1      49 % (Q: 96.3 %/S: 97.9 %)     conserved hypothetical protein (xxxX) {Archaeoglobus fulgidus}
625.1   1.1      55 % (Q: 97.0 %/S: 93.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
626.1   1.1      50 % (Q: 99.3 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
627.1   1.1      43 % (Q: 90.6 %/S: 97.5 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
628.1   1.1      43 % (Q: 96.1 %/S: 98.5 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
632.1   1.1      63 % (Q: 93.2 %/S: 94.0 %)     conserved hypothetical protein (xxxX) {Agrocybe aegerita}
642.1   3.1      31 % (Q:100.0 %/S:102.3 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
648.1   3.1      33 % (Q: 67.7 %/S: 69.5 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
659.1   3.1      43 % (Q: 91.9 %/S: 92.3 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
661.1   3.1      93 % (Q:100.0 %/S: 94.2 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
668.1   3.1      35 % (Q: 38.1 %/S:  4.7 %)     conserved hypothetical protein (xxxX) {xxx}
670.1   3.1      53 % (Q: 97.0 %/S: 98.0 %)     conserved hypothetical protein (xxxX) {Clostridium barkeri}
676.1   3.1      24 % (Q: 81.4 %/S: 77.1 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
688.1   2.1      43 % (Q: 97.5 %/S: 98.2 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
692.1   2.1      47 % (Q:103.0 %/S:100.5 %)     conserved hypothetical protein (xxxX) {Rhizobium sp. NGR234}
696.1   2.1      33 % (Q: 93.5 %/S: 94.2 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
700.1   1.1      52 % (Q: 94.1 %/S: 91.4 %)     conserved hypothetical protein (xxxX) {Bradyrhizobium japonicum}
703.1   1.1      56 % (Q: 87.2 %/S: 98.7 %)     conserved hypothetical protein (xxxX) {Mycobacterium tuberculosis}
704.1   1.1      33 % (Q: 99.3 %/S: 98.6 %)     conserved hypothetical protein (xxxX) {Listeria welshimeri}
705.1   1.1      50 % (Q: 81.0 %/S: 60.3 %)     conserved hypothetical protein (xxxX) {Escherichia coli K12}
708.1   1.1      53 % (Q: 99.6 %/S: 98.6 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
717.1   1.1      53 % (Q: 73.6 %/S: 77.9 %)     conserved hypothetical protein (xxxX) {Escherichia coli O157:H7}
718.1   1.1      43 % (Q: 93.9 %/S:101.1 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
720.1   1.1      61 % (Q: 90.6 %/S: 97.3 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
722.1   1.1      43 % (Q: 93.9 %/S: 90.5 %)     conserved hypothetical protein (xxxX) {Brucella melitensis biovar Abortus}
734.1   1.1      52 % (Q: 86.4 %/S: 87.7 %)     conserved hypothetical protein (xxxX) {xxx}
735.1   1.1      63 % (Q: 99.4 %/S:100.6 %)     conserved hypothetical protein (xxxX) {Trypanosoma cruzi}
737.1   1.1      70 % (Q: 96.7 %/S: 95.5 %)     conserved hypothetical protein (xxxX) {Arabidopsis thaliana}
739.1   1.1      55 % (Q: 77.0 %/S: 79.0 %)     conserved hypothetical protein (xxxX) {Drosophila melanogaster}
744.1   1.1      83 % (Q: 92.3 %/S: 99.1 %)     conserved hypothetical protein {xxxx}
746.1   1.1      37 % (Q: 60.5 %/S:100.4 %)     conserved hypothetical protein {}
749.1   1.1      46 % (Q: 94.7 %/S: 95.5 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
767.1   1.1      59 % (Q: 98.3 %/S: 97.9 %)     conserved hypothetical protein (xxxX) {Zymomonas mobilis}
787.1   1.1      31 % (Q: 40.0 %/S: 54.1 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
789.1   1.1      27 % (Q: 98.7 %/S: 99.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa phage phi CTX}
792.1   1.1      76 % (Q: 82.2 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
795.1   1.1      68 % (Q: 95.0 %/S: 98.5 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis}
802.1   1.1      67 % (Q: 91.8 %/S: 88.0 %)     conserved hypothetical protein (xxxX) {Rhodobacter}
807.1   1.1      64 % (Q: 91.8 %/S: 78.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
812.1   1.1      69 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Homo sapiens}
820.1   1.1      78 % (Q: 93.5 %/S: 91.8 %)     conserved hypothetical protein (xxxX) {Vibrio mimicus}
821.1   1.1      70 % (Q: 90.9 %/S: 96.5 %)     conserved hypothetical protein (xxxX) {Salmonella typhi}
824.1   1.1      62 % (Q:100.0 %/S: 92.1 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
828.1   1.1      43 % (Q: 76.9 %/S: 97.2 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
829.1   1.1      69 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Haemophilus influenzae}
831.1   1.1      62 % (Q: 75.3 %/S: 94.2 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
838.1   1.1      72 % (Q:100.0 %/S: 94.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
852.1   1.1      62 % (Q: 99.6 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Mycobacterium leprae}
859.1   1.1      58 % (Q: 95.5 %/S: 99.2 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
863.1   1.1      48 % (Q: 94.6 %/S: 91.8 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
865.1   1.1      52 % (Q: 96.3 %/S: 97.7 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
875.1   1.1      35 % (Q: 76.4 %/S: 71.7 %)     conserved hypothetical protein (xxxX) {Haemophilus influenzae}
880.1   1.1      33 % (Q: 58.2 %/S: 28.6 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
886.1   1.1      50 % (Q: 90.7 %/S: 94.9 %)     conserved hypothetical protein (xxxX) {Erwinia stewartii}
888.1   1.1      61 % (Q: 90.7 %/S: 97.5 %)     Conserved Hypothetical Protein (xxxX) {Bacillus halodurans}
889.1   1.1      56 % (Q:102.9 %/S: 98.3 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
892.1   1.1      43 % (Q: 91.1 %/S: 80.7 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
894.1   1.1      52 % (Q: 96.2 %/S: 96.2 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
895.1   1.1      30 % (Q: 98.4 %/S: 96.2 %)     conserved hypothetical protein (xxxX) {Mycobacterium tuberculosis}
896.1   1.1      51 % (Q: 78.9 %/S: 83.3 %)     conserved hypothetical protein (xxxX) {Mycobacterium tuberculosis}
898.1   1.1      27 % (Q:103.5 %/S: 67.4 %)     conserved hypothetical protein (xxxX) {Methanococcus jannaschii}
901.1   2.1      34 % (Q: 87.0 %/S: 87.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
902.1   2.1      35 % (Q: 88.1 %/S: 98.2 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
922.1   2.1      54 % (Q:100.5 %/S:100.5 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
923.1   2.1      60 % (Q: 99.3 %/S: 98.0 %)     conserved hypothetical protein (xxxX) {Rhodospirillum centenum}
925.1   2.1      41 % (Q: 92.4 %/S: 94.4 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
932.1   1.1      33 % (Q: 88.5 %/S: 83.8 %)     conserved hypothetical protein (xxxX) {Caulobacter crescentus}
935.1   1.1      39 % (Q: 33.2 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
937.1   1.1      58 % (Q: 98.9 %/S: 98.9 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
938.1   1.1      50 % (Q: 99.5 %/S:100.6 %)     conserved hypothetical protein (xxxX) {Drosophila melanogaster}
946.1   1.1      40 % (Q: 93.0 %/S: 97.9 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
950.1   1.1      40 % (Q: 96.4 %/S: 94.6 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
967.1   2.1      57 % (Q: 94.7 %/S: 82.2 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
979.1   1.1      38 % (Q: 86.4 %/S: 91.8 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
992.1   1.1      27 % (Q: 96.4 %/S:103.3 %)     conserved hypothetical protein (xxxX) {Shuttle vector pI3}
995.1   1.1      34 % (Q: 39.3 %/S: 91.3 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens A6}
996.1   1.1      64 % (Q:101.1 %/S: 85.2 %)     conserved hypothetical protein (xxxX) {Rhodobacter capsulatus}
1000.1  1.1      43 % (Q: 86.6 %/S: 89.0 %)     conserved hypothetical protein (xxxX) {Homo sapiens}
1001.1  1.1      49 % (Q: 98.3 %/S: 96.7 %)     conserved hypothetical protein (xxxX) {Xenopus laevis}
1002.1  1.1      53 % (Q: 88.1 %/S: 69.0 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
1003.1  1.1      50 % (Q: 93.1 %/S: 95.5 %)     conserved hypothetical protein (xxxX) {Bradyrhizobium japonicum}
1004.1  1.1      51 % (Q: 97.2 %/S: 97.2 %)     conserved hypothetical protein (xxxX) {Bradyrhizobium japonicum}
1009.1  1.1     100 % (Q: 43.5 %/S:  9.7 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
1013.1  1.1      56 % (Q: 97.9 %/S: 97.2 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1023.1  1.1      59 % (Q: 99.7 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Aquifex aeolicus}
1025.1  1.1      69 % (Q: 91.2 %/S:104.8 %)     conserved hypothetical protein (xxxX) {Rhizobium leguminosarum bv. viciae}
1026.1  1.1      79 % (Q: 98.8 %/S: 97.0 %)     conserved hypothetical protein (xxxX) {Rhizobium leguminosarum bv. viciae}
1032.1  1.1      62 % (Q:100.0 %/S: 97.1 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
1034.1  1.1      67 % (Q: 98.1 %/S: 98.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1041.1  1.1      30 % (Q: 82.5 %/S: 75.7 %)     conserved hypothetical protein (xxxX) {Mycobacterium leprae}
1049.1  1.1      49 % (Q: 99.4 %/S: 98.7 %)     conserved hypothetical protein (xxxX) {Staphylococcus aureus (fragment)}
1050.1  1.1      59 % (Q: 96.8 %/S: 97.4 %)     conserved hypothetical protein (xxxX) {Staphylococcus aureus (fragment)}
1052.1  1.1      63 % (Q: 95.1 %/S: 97.0 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
1073.1  1.1      52 % (Q:100.0 %/S: 96.2 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
1096.1  1.1      76 % (Q: 94.7 %/S: 96.9 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
1097.1  1.1      78 % (Q: 88.0 %/S: 97.8 %)     conserved hypothetical protein (xxxX) {Rhizobium leguminosarum}
1107.1  2.1      61 % (Q: 97.1 %/S: 45.9 %)     conserved hypothetical protein (xxxX) {Brucella melitensis}
1108.1  2.1      45 % (Q: 77.8 %/S: 37.1 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
1110.1  2.1      30 % (Q: 97.4 %/S:105.4 %)     conserved hypothetical protein (xxxX) {Schizosaccharomyces pombe}
1115.1  2.1      59 % (Q: 99.4 %/S: 99.1 %)     conserved hypothetical protein (xxxX) {Clostridium sticklandii}
1134.1  2.1      41 % (Q: 99.2 %/S: 97.8 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
1138.1  2.1      74 % (Q: 97.7 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
1153.1  2.1      62 % (Q: 92.4 %/S: 47.0 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
1154.1  2.1      57 % (Q: 98.5 %/S: 98.5 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
1181.1  1.1      56 % (Q: 97.3 %/S: 97.8 %)     conserved hypothetical protein (xxxX) {Mycobacterium tuberculosis}
1184.1  1.1      36 % (Q:100.9 %/S: 85.9 %)     conserved hypothetical protein (xxxX) {xxx}
1187.1  1.1      55 % (Q: 86.0 %/S: 96.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1190.1  1.1      48 % (Q: 86.5 %/S:100.7 %)     conserved hypothetical protein (xxxX) {Escherichia coli O157:H7}
1193.1  1.1      66 % (Q: 97.5 %/S: 98.3 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
1195.1  1.1      52 % (Q: 90.7 %/S: 91.9 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
1196.1  1.1      53 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas fluorescens}
1200.1  2.1      35 % (Q:105.0 %/S: 96.2 %)     conserved hypothetical protein (xxxX) {Myxococcus xanthus}
1202.1  2.1      52 % (Q: 95.6 %/S: 98.3 %)     conserved hypothetical protein (xxxX) {Arthrobacter sp}
1203.1  2.1      71 % (Q: 99.2 %/S: 96.1 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
1204.1  2.1      46 % (Q: 88.4 %/S: 87.5 %)     conserved hypothetical protein (xxxX) {Rhizobium rhizogenes}
1205.1  2.1      50 % (Q: 86.8 %/S: 83.1 %)     conserved hypothetical protein (xxxX) {Methylobacterium extorquens}
1207.1  2.1      75 % (Q: 97.7 %/S: 97.7 %)     conserved hypothetical protein (xxxX) {Rhizobium rhizogenes}
1226.1  2.1      69 % (Q: 99.6 %/S: 96.2 %)     conserved hypothetical protein (xxxX) {Rhodopseudomonas blastica}
1229.1  2.1      59 % (Q: 98.6 %/S: 96.0 %)     conserved hypothetical protein (xxxX) {Synechocystis sp}
1231.1  2.1      56 % (Q: 97.2 %/S: 91.2 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
1232.1  2.1      35 % (Q: 58.4 %/S: 24.7 %)     conserved hypothetical protein (xxxX) {Erwinia stewartii Plasmid pSW200}
1241.1  2.1      47 % (Q: 97.6 %/S: 93.7 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
1242.1  2.1      57 % (Q: 96.2 %/S: 94.9 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis Z2491}
1249.1  1.1      49 % (Q: 96.6 %/S: 93.4 %)     conserved hypothetical protein (xxxX) {Archaeoglobus fulgidus}
1250.1  1.1      46 % (Q: 92.2 %/S: 94.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1252.1  1.1      40 % (Q: 95.4 %/S: 91.7 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
1253.1  1.1      54 % (Q: 96.6 %/S: 95.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1260.1  1.1      48 % (Q: 95.5 %/S: 94.1 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
1265.1  1.1      79 % (Q: 99.7 %/S: 98.3 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
1272.1  1.1      60 % (Q: 97.7 %/S: 98.3 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1273.1  1.1      53 % (Q: 81.9 %/S: 95.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1274.1  1.1      67 % (Q: 94.0 %/S: 95.2 %)     conserved hypothetical protein (xxxX) {Vibrio cholera}
1275.1  1.1      62 % (Q:100.0 %/S: 99.3 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1277.1  1.1      55 % (Q: 95.5 %/S: 84.8 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis Z2491}
1293.1  1.1      48 % (Q: 79.1 %/S: 63.6 %)     conserved hypothetical protein (xxxX) {Synechocystis sp}
1295.1  1.1      58 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Arabidopsis thaliana}
1296.1  1.1      49 % (Q: 82.5 %/S: 93.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa PAO1}
1300.1  1.1      54 % (Q:101.0 %/S:100.2 %)     conserved hypothetical protein (xxxX) {Synechocystis sp}
1301.1  1.1      66 % (Q: 93.8 %/S: 84.0 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
1302.1  1.1      80 % (Q: 98.4 %/S: 93.3 %)     conserved hypothetical protein (xxxX) {Thermotoga maritima}
1308.1  1.1      84 % (Q:100.0 %/S: 98.7 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
1314.1  1.1      25 % (Q: 94.7 %/S: 95.6 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
1316.1  1.1      67 % (Q:100.0 %/S: 96.2 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
1317.1  1.1      57 % (Q:100.4 %/S: 98.1 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
1318.1  1.1      46 % (Q: 97.5 %/S: 97.5 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
1320.1  1.1      71 % (Q: 99.7 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1326.1  1.1      34 % (Q: 99.0 %/S: 98.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1334.1  1.1      55 % (Q: 72.9 %/S: 91.7 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
1347.1  1.1      36 % (Q: 91.6 %/S: 98.4 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
1375.1  1.1      40 % (Q: 99.0 %/S:106.3 %)     conserved hypothetical protein (xxxX) {Sulfolobus solfataricus}
1380.1  1.1      38 % (Q: 86.0 %/S: 93.2 %)     conserved hypothetical protein {}
1385.1  1.1      66 % (Q: 96.3 %/S: 91.3 %)     Conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1392.1  1.1      28 % (Q:106.8 %/S: 96.8 %)     conserved hypothetical protein (xxxX) {Arabidopsis thaliana}
1393.1  1.1      70 % (Q: 95.1 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
1396.1  1.1      54 % (Q: 99.0 %/S: 96.2 %)     Conserved hypothetical protein (xxxX) {Rhodobacter sphaeroides}
1397.1  1.1      46 % (Q:110.6 %/S: 96.3 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1398.1  1.1      37 % (Q: 89.9 %/S: 86.2 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
1401.1  1.1      46 % (Q:101.1 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Serratia marcescens}
1408.1  1.1      59 % (Q: 94.0 %/S: 80.9 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
1410.1  1.1      26 % (Q: 92.5 %/S: 91.5 %)     conserved hypothetical protein (xxxX) {Gluconobacter oxydans}
1411.1  1.1      42 % (Q: 86.4 %/S: 91.5 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
1412.1  1.1      33 % (Q: 94.8 %/S: 86.3 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
1422.1  4.1      91 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
1424.1  4.1      90 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens SAKURA}
1427.1  4.1      95 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
1428.1  4.1      93 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
1429.1  4.1      97 % (Q:100.0 %/S: 96.5 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
1431.1  4.1      70 % (Q:100.2 %/S: 99.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1432.1  4.1      67 % (Q: 97.6 %/S: 81.6 %)     conserved hypothetical protein (xxxX) {xxx}
1434.1  4.1      63 % (Q: 78.5 %/S: 58.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1440.1  4.1      35 % (Q:100.7 %/S: 99.4 %)     conserved hypothetical protein (xxxX) {Salmonella enterica}
1457.1  4.1      35 % (Q: 95.8 %/S: 82.6 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
1459.1  4.1      34 % (Q:100.0 %/S: 94.5 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
1473.1  2.1      46 % (Q: 94.3 %/S: 95.9 %)     conserved hypothetical protein (xxxX) {Synechocystis sp. PCC6803}
1490.1  2.1      45 % (Q: 82.9 %/S: 82.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1492.1  2.1      53 % (Q: 84.5 %/S: 91.6 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
1493.1  2.1      62 % (Q: 94.6 %/S: 94.6 %)     conserved hypothetical protein (xxxX) {Rhodobacter capsulatus (Rhodopseudomonas capsulata)}
1494.1  2.1      43 % (Q: 99.1 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
1497.1  1.1      44 % (Q: 94.7 %/S: 93.2 %)     conserved hypothetical protein (xxxX) {Zymomonas mobilis}
1498.1  1.1      51 % (Q: 99.2 %/S: 84.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1502.1  1.1      45 % (Q: 97.1 %/S: 96.2 %)     Conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
1503.1  1.1      88 % (Q: 99.5 %/S: 99.1 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
1505.1  1.1      67 % (Q:100.0 %/S: 81.9 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1507.1  1.1      83 % (Q:100.0 %/S: 93.5 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
1508.1  1.1      43 % (Q: 83.3 %/S: 91.3 %)     conserved hypothetical protein (xxxX) {Arabidopsis thaliana}
1511.1  1.1      53 % (Q: 99.2 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
1512.1  1.1      46 % (Q: 49.7 %/S: 93.1 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis Z2491}
1518.1  1.1      44 % (Q: 98.8 %/S: 94.3 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1522.1  1.1      85 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Rhizobium leguminosarum bv. viciae}
1523.1  1.1      82 % (Q: 80.1 %/S:100.0 %)     conserved hypothetical protein (mazG) {Rhizobium leguminosarum bv. viciae}
1536.1  1.1      72 % (Q: 97.4 %/S: 97.4 %)     conserved hypothetical protein (xxxX) {Zymomonas mobilis}
1537.1  1.1      34 % (Q: 86.8 %/S:101.2 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
1552.1  3.1      70 % (Q: 99.4 %/S: 98.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1554.1  3.1      70 % (Q: 97.5 %/S: 77.3 %)     conserved hypothetical protein (xxxX) {Halobacterium sp. NRC-1}
1555.1  3.1      59 % (Q: 82.1 %/S: 97.9 %)     conserved hypothetical protein (xxxX) {Caulobacter crescentus}
1563.1  3.1      35 % (Q: 56.9 %/S: 58.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1567.1  3.1      42 % (Q: 82.0 %/S: 77.8 %)     conserved hypothetical protein (xxxX) {Rhizobium sp. NGR234}
1568.1  3.1      58 % (Q: 85.3 %/S: 16.4 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
1577.1  3.1      56 % (Q: 68.6 %/S: 95.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1588.1  3.1      58 % (Q: 94.5 %/S: 81.2 %)     conserved hypothetical protein (xxxX) {Rhizobium leguminosarum bv. viciae}
1592.1  3.1      41 % (Q: 94.1 %/S: 94.9 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3-2}
1593.1  3.1      51 % (Q: 99.6 %/S: 91.9 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3-2}
1594.1  3.1      31 % (Q: 84.5 %/S: 97.9 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
1599.1  3.1      44 % (Q: 99.0 %/S: 99.0 %)     conserved hypothetical protein (xxxX) {Mycobacterium avium}
1624.1  1.1      42 % (Q: 91.9 %/S: 95.1 %)     conserved hypothetical protein (xxxX) {Zymomonas mobilis}
1626.1  1.1      49 % (Q: 94.7 %/S: 65.5 %)     conserved hypothetical protein (xxxX) {Aquifex aeolicus}
1629.1  1.1      47 % (Q: 98.9 %/S: 95.8 %)     conserved hypothetical protein (xxxX) {Listeria monocytogenes}
1631.1  1.1      23 % (Q: 99.8 %/S:102.1 %)     conserved hypothetical protein (xxxX) {Escherichia coli K12}
1633.1  1.1      53 % (Q: 95.1 %/S: 93.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1636.1  1.1      77 % (Q:100.1 %/S:100.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1639.1  1.1      56 % (Q: 98.4 %/S: 98.4 %)     conserved hypothetical protein {}
1640.1  1.1      33 % (Q: 60.2 %/S: 86.0 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
1643.1  1.1      60 % (Q: 99.6 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Zymomonas mobilis}
1650.1  1.1      62 % (Q: 99.3 %/S: 95.7 %)     conserved hypothetical protein (xxxX) {Rhizobium rhizogenes}
1654.1  1.1      60 % (Q:102.0 %/S: 69.9 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
1655.1  1.1      66 % (Q: 97.2 %/S: 97.2 %)     conserved hypothetical protein (xxxX) {Zymomonas mobilis}
1658.1  1.1      64 % (Q: 93.2 %/S: 91.5 %)     conserved hypothetical protein (xxxX) {Roseobacter denitrificans}
1659.1  1.1      53 % (Q: 96.7 %/S: 93.3 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
1660.1  1.1      54 % (Q:106.6 %/S: 96.4 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
1664.1  1.1      36 % (Q: 58.6 %/S: 97.4 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
1665.1  1.1      58 % (Q: 94.9 %/S: 97.6 %)     conserved hypothetical protein (xxxX) {Pseudomonas syringae}
1666.1  1.1      38 % (Q: 98.2 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3-2}
1678.1  1.1      83 % (Q: 98.9 %/S: 96.9 %)     conserved hypothetical protein (xxxX) {Bradyrhizobium japonicum}
1693.1  2.1      54 % (Q: 93.7 %/S: 98.7 %)     conserved hypothetical protein (xxxX) {Rhodobacter capsulatus}
1696.1  2.1      64 % (Q: 95.5 %/S:100.9 %)     conserved hypothetical protein (xxxX) {xxx}
1699.1  2.1      48 % (Q: 98.9 %/S: 96.9 %)     conserved hypothetical protein (xxxX) {Rhizobium sp. NGR234}
1711.1  2.1      70 % (Q: 93.7 %/S: 92.9 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1715.1  2.1      43 % (Q: 96.7 %/S:101.0 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
1725.1  2.1      58 % (Q: 94.9 %/S: 89.8 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
1726.1  2.1      52 % (Q: 92.0 %/S: 94.9 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis}
1728.1  2.1      63 % (Q:100.9 %/S: 94.7 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
1729.1  1.1      41 % (Q: 98.7 %/S: 95.3 %)     conserved hypothetical protein (xxxX) {Zymomonas mobilis}
1733.1  1.1      45 % (Q: 90.5 %/S: 90.2 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis}
1741.1  1.1      69 % (Q: 97.3 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
1743.1  1.1      79 % (Q: 98.8 %/S: 95.2 %)     conserved hypothetical protein (xxxX) {Synechocystis sp. PCC6803}
1753.1  1.1      79 % (Q: 83.3 %/S: 95.6 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1757.1  1.1      57 % (Q: 97.7 %/S: 90.3 %)     conserved hypothetical protein (xxxX) {Archaeoglobus fulgidus}
1765.1  1.1      32 % (Q: 95.3 %/S: 94.5 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
1769.1  1.1      68 % (Q: 94.5 %/S: 95.1 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
1772.1  1.1     100 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
1781.1  1.1      76 % (Q: 96.8 %/S: 94.4 %)     conserved hypothetical protein (xxxX) {Rhizobium sp}
1792.1  1.1     100 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
1799.1  1.1     100 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
1807.1  1.1      36 % (Q:106.2 %/S: 31.2 %)     conserved hypothetical protein (xxxX) {Caenorhabditis elegans}
1823.1  2.1      26 % (Q:102.4 %/S: 25.8 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
1838.1  2.1      68 % (Q: 98.3 %/S: 99.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1844.1  2.1      55 % (Q:100.0 %/S: 98.2 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
1860.1  1.1      59 % (Q: 90.6 %/S: 87.2 %)     conserved hypothetical protein (xxxX) {Bradyrhizobium japonicum}
1865.1  1.1      28 % (Q: 35.7 %/S: 89.6 %)     conserved hypothetical protein (xxxX) {Chlamydophila pneumoniae}
1867.1  1.1      61 % (Q: 94.5 %/S: 94.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas fluorescens}
1868.1  1.1      39 % (Q: 87.0 %/S:102.3 %)     conserved hypothetical protein (xxxX) {Mycobacterium tuberculosis}
1869.1  1.1      61 % (Q: 57.0 %/S: 99.8 %)     conserved hypothetical protein (xxxX) {Synechocystis sp}
1873.1  1.1      58 % (Q: 96.5 %/S: 96.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1875.1  1.1      50 % (Q: 83.1 %/S: 95.2 %)     conserved hypothetical protein (xxxX) {Archaeoglobus fulgidus}
1881.1  1.1      61 % (Q: 86.3 %/S: 78.0 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
1883.1  1.1      40 % (Q: 88.5 %/S:105.9 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
1893.1  1.1      50 % (Q: 98.6 %/S:100.7 %)     conserved hypothetical protein (xxxX) {Rhodobacter capsulatus (Rhodopseudomonas capsulata)}
1900.1  1.1      40 % (Q: 96.9 %/S: 97.9 %)     conserved hypothetical protein (xxxX) {Pseudomonas stutzeri}
1901.1  1.1      60 % (Q: 98.1 %/S: 98.1 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
1912.1  1.1      66 % (Q: 99.6 %/S: 98.1 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis}
1932.1  3.1      44 % (Q: 97.4 %/S: 91.0 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
1933.1  3.1      75 % (Q:100.3 %/S:100.0 %)     conserved hypothetical protein (attH) {Agrobacterium tumefaciens}
1937.1  3.1      68 % (Q: 98.8 %/S: 46.7 %)     conserved hypothetical protein (xxxX) {Rhizobium rhizogenes}
1945.1  3.1      36 % (Q: 93.8 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
1947.1  3.1      46 % (Q: 80.0 %/S: 73.2 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
1948.1  1.1      46 % (Q: 99.9 %/S:101.5 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
1956.1  1.1      54 % (Q: 94.9 %/S: 96.0 %)     conserved hypothetical protein (xxxX) {Halobacterium sp. NRC-1}
1963.1  1.1      60 % (Q: 96.8 %/S: 99.5 %)     conserved hypothetical protein (xxxX) {Rhodobacter capsulatus}
1964.1  1.1      43 % (Q:100.0 %/S:107.9 %)     conserved hypothetical protein (fxsA) {Vibrio cholerae}
1970.1  1.1      65 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
1972.1  1.1      62 % (Q: 99.4 %/S:101.2 %)     conserved hypothetical protein (xxxX) {Rhodobacter sphaeroides}
1981.1  1.1      43 % (Q: 92.7 %/S: 98.5 %)     conserved hypothetical protein (xxxX) {Streptococcus salivarius}
1989.1  1.1      37 % (Q:102.2 %/S: 94.9 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3-2}
1992.1  1.1      69 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3-2}
1993.1  1.1      54 % (Q:100.8 %/S: 96.9 %)     conserved hypothetical protein (xxxX) {Homo sapiens}
1998.1  1.1      54 % (Q: 99.1 %/S: 99.1 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
2028.1  1.1      65 % (Q: 95.5 %/S: 98.6 %)     conserved hypothetical protein (xxxX) {Pasteurella multocida}
2029.1  1.1      37 % (Q: 87.9 %/S: 74.7 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
2030.1  1.1      60 % (Q: 98.7 %/S: 98.7 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
2032.1  1.1      62 % (Q: 72.6 %/S: 97.6 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
2033.1  1.1      36 % (Q:100.0 %/S: 56.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2037.1  1.1      27 % (Q: 95.1 %/S: 98.9 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2038.1  1.1      35 % (Q: 95.6 %/S: 97.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2051.1  1.1      59 % (Q: 99.6 %/S:100.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas denitrificans}
2057.1  1.1      57 % (Q: 97.6 %/S: 90.6 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
2060.1  1.1      60 % (Q: 98.2 %/S: 97.5 %)     conserved hypothetical protein (xxxX) {Brucella melitensis biovar Abortus}
2079.1  2.1      58 % (Q: 95.8 %/S: 90.3 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
2080.1  2.1      57 % (Q: 72.1 %/S: 52.4 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
2093.1  2.1      61 % (Q: 99.7 %/S: 99.2 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
2107.1  2.1      38 % (Q: 90.0 %/S: 90.6 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
2112.1  2.1      45 % (Q: 79.0 %/S: 85.6 %)     conserved hypothetical protein (xxx) {Mesorhizobium loti}
2113.1  2.1      52 % (Q: 90.0 %/S: 98.9 %)     conserved hypothetical protein (xxxX) {Synechocystis sp}
2115.1  2.1      57 % (Q:100.0 %/S: 95.4 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
2126.1  1.1      36 % (Q: 91.5 %/S: 94.9 %)     conserved hypothetical protein (xxxX) {Schizosaccharomyces pombe}
2130.1  1.1      43 % (Q: 99.9 %/S: 92.3 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
2139.1  1.1      64 % (Q:100.9 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2142.1  1.1      59 % (Q: 97.9 %/S: 81.5 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
2143.1  1.1      39 % (Q: 93.4 %/S:101.4 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3-2}
2150.1  1.1      34 % (Q: 86.3 %/S: 86.1 %)     conserved hypothetical protein (xxxX) {Salmonella enterica}
2155.1  1.1      53 % (Q: 92.3 %/S: 96.0 %)     conserved hypothetical protein (xxxX) {xxx}
2156.1  1.1      53 % (Q: 99.4 %/S:103.5 %)     conserved hypothetical protein (xxxX) {Synechocystis sp. PCC 6803}
2157.1  1.1      66 % (Q: 97.4 %/S: 97.9 %)     conserved hypothetical protein (xxxX) {Rhodobacter capsulatus}
2167.1  1.1      63 % (Q: 97.4 %/S: 97.4 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
2175.1  1.1      51 % (Q: 97.6 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
2181.1  1.1      51 % (Q: 98.2 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
2182.1  1.1      75 % (Q:100.5 %/S: 99.5 %)     conserved hypothetical protein (xxxX) {Mus musculus}
2185.1  1.1      69 % (Q: 94.0 %/S: 96.2 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
2189.1  1.1      58 % (Q: 88.4 %/S: 89.0 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
2196.1  1.1      38 % (Q: 97.9 %/S: 59.9 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
2197.1  1.1      59 % (Q: 96.8 %/S: 97.3 %)     conserved hypothetical protein (xxxX) {Rhizobium meliloti}
2205.1  1.1      71 % (Q: 99.5 %/S: 96.8 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
2213.1  1.1      31 % (Q: 93.8 %/S: 94.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2219.1  1.1      61 % (Q: 98.0 %/S: 93.5 %)     conserved hypothetical protein (xxxX) {Zymomonas mobilis}
2229.1  1.1      63 % (Q: 83.8 %/S:102.5 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
2238.1  1.1      99 % (Q: 93.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
2241.1  1.1     100 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
2247.1  1.1     100 % (Q:100.0 %/S: 92.4 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
2249.1  1.1      35 % (Q: 92.1 %/S:103.3 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
2253.1  1.1      69 % (Q: 99.3 %/S: 99.3 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
2265.1  1.1      34 % (Q:103.4 %/S: 86.6 %)     conserved hypothetical protein (xxxX) {Caulobacter crescentus}
2276.1  1.1      22 % (Q: 59.8 %/S: 42.3 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
2282.1  1.1      64 % (Q: 99.0 %/S: 99.2 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
2293.1  3.1      55 % (Q: 98.5 %/S: 97.8 %)     conserved hypothetical protein (xxxX) {Bordetella pertussis}
2302.1  3.1      36 % (Q: 92.3 %/S: 96.2 %)     conserved hypothetical protein (xxxX) {Synechocystis sp}
2303.1  3.1      47 % (Q: 88.2 %/S: 94.1 %)     conserved hypothetical protein (xxxX) {Synechocystis sp}
2306.1  3.1      69 % (Q: 98.5 %/S: 98.0 %)     conserved hypothetical protein (xxxX) {xxx}
2307.1  3.1      53 % (Q: 96.3 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Salmonella typhimurium}
2310.1  3.1      50 % (Q: 89.1 %/S: 92.1 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
2314.1  3.1      54 % (Q: 99.5 %/S: 40.9 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
2315.1  3.1      26 % (Q: 91.2 %/S: 36.3 %)     conserved hypothetical protein (xxxX) {Schizosaccharomyces pombe}
2316.1  3.1      41 % (Q: 12.4 %/S: 38.5 %)     conserved hypothetical protein (xxxX) {Saccharomyces cerevisiae}
2317.1  3.1      37 % (Q: 39.1 %/S:  5.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2323.1  3.1      54 % (Q: 98.2 %/S: 99.6 %)     conserved hypothetical protein (xxxX) {Synechococcus sp}
2326.1  3.1      45 % (Q: 92.2 %/S: 95.3 %)     conserved hypothetical protein (xxxX) {Myxococcus xanthus}
2329.1  3.1      88 % (Q: 99.6 %/S: 60.2 %)     conserved hypothetical protein (xxxX) {Shigella flexneri}
2344.1  1.1      67 % (Q: 98.1 %/S: 81.7 %)     conserved hypothetical protein {}
2346.1  1.1      68 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Thermotoga maritima}
2348.1  1.1      57 % (Q: 93.7 %/S: 98.3 %)     conserved hypothetical protein (xxxX) {Escherichia coli O157:H7 EDL933}
2350.1  1.1      43 % (Q: 83.2 %/S: 95.7 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
2352.1  1.1      58 % (Q: 91.4 %/S: 89.1 %)     conserved hypothetical protein (xxxX) {xxx}
2355.1  1.1      38 % (Q: 99.5 %/S: 94.9 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
2357.1  1.1      32 % (Q: 95.9 %/S: 94.4 %)     conserved hypothetical protein (xxxX) {Escherichia coli O157:H7}
2361.1  1.1      98 % (Q:100.0 %/S: 95.1 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
2363.1  1.1      46 % (Q: 95.4 %/S: 97.7 %)     conserved hypothetical protein (xxxX) {Campylobacter jejuni}
2364.1  1.1      47 % (Q: 86.1 %/S: 86.1 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
2368.1  1.1      49 % (Q: 95.9 %/S: 99.1 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
2375.1  1.1      60 % (Q: 98.3 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2376.1  1.1      61 % (Q: 98.1 %/S: 99.7 %)     conserved hypothetical protein (xxxX) {Synechocystis sp}
2388.1  1.1      26 % (Q:100.9 %/S: 77.3 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2390.1  1.1      40 % (Q: 91.3 %/S: 77.7 %)     conserved hypothetical protein (xxxX) {Streptomyces reticuli}
2395.1  1.1      34 % (Q: 98.5 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2397.1  1.1      43 % (Q: 95.1 %/S: 92.5 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
2398.1  1.1      50 % (Q: 98.9 %/S: 99.4 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
2400.1  1.1      46 % (Q: 98.1 %/S: 99.7 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
2403.1  1.1      36 % (Q: 91.8 %/S: 95.0 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
2405.1  1.1      52 % (Q:100.3 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
2406.1  1.1      59 % (Q:102.6 %/S: 94.7 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
2409.1  2.1      35 % (Q:100.8 %/S: 95.6 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
2412.1  2.1      42 % (Q: 95.7 %/S: 97.0 %)     conserved hypothetical protein (xxxX) {Rhodobacter capsulatus}
2417.1  2.1      93 % (Q:100.0 %/S: 94.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2427.1  2.1      34 % (Q: 82.3 %/S: 92.0 %)     conserved hypothetical protein (xxxX) {xxx}
2429.1  2.1      60 % (Q: 93.5 %/S: 98.6 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
2435.1  2.1      44 % (Q: 98.0 %/S: 93.0 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
2443.1  3.1      56 % (Q: 99.5 %/S: 96.6 %)     conserved hypothetical protein (xxxX) {Sphingomonas aromaticivorans plasmid pNL1}
2444.1  3.1      25 % (Q: 80.9 %/S: 17.4 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
2451.1  3.1      66 % (Q:100.3 %/S: 97.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2453.1  3.1      48 % (Q: 95.7 %/S: 98.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2455.1  3.1      44 % (Q: 36.8 %/S: 34.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2459.1  3.1      60 % (Q: 99.8 %/S: 99.8 %)     conserved hypothetical protein (xxxX) {Rhizobium vitis}
2463.1  2.1      34 % (Q: 91.0 %/S: 72.7 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
2464.1  2.1      53 % (Q: 98.6 %/S: 77.2 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
2476.1  2.1      71 % (Q: 93.8 %/S: 96.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas denitrificans}
2480.1  2.1      40 % (Q:101.8 %/S:121.8 %)     conserved hypothetical protein (xxxX) {xxx}
2499.1  2.1      31 % (Q:100.5 %/S:104.9 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
2508.1  2.1      34 % (Q: 87.7 %/S: 61.6 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
2509.1  2.1      64 % (Q: 94.4 %/S: 98.7 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
2524.1  2.1      55 % (Q: 93.0 %/S: 92.4 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
2525.1  2.1      82 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
2526.1  2.1      32 % (Q: 99.5 %/S: 98.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2532.1  2.1      27 % (Q: 57.3 %/S: 63.7 %)     conserved hypothetical protein (xxxX) {Methanobacterium thermoautotrophicum (strain Delta H)}
2535.1  2.1      23 % (Q: 65.3 %/S: 38.5 %)     conserved hypothetical protein (xxxX) {Sulfolobus solfataricus}
2543.1  2.1      69 % (Q: 65.0 %/S: 87.2 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens SAKURA}
2545.1  2.1      31 % (Q:100.5 %/S: 99.2 %)     conserved hypothetical protein (xxxX) {Rhizobium leguminosarum bv. trifolii}
2547.1  2.1      35 % (Q: 91.6 %/S: 88.3 %)     conserved hypothetical protein (xxxX) {Rhizobium leguminosarum bv. trifolii}
2548.1  2.1      45 % (Q: 98.7 %/S: 94.7 %)     conserved hypothetical protein (xxxX) {Rhizobium leguminosarum bv. trifolii}
2560.1  2.1      56 % (Q: 91.9 %/S: 94.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2569.1  2.1      67 % (Q:100.5 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
2570.1  2.1      59 % (Q: 96.1 %/S: 92.9 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
2573.1  1.1      44 % (Q: 87.6 %/S: 73.6 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2576.1  1.1      49 % (Q: 98.6 %/S:101.4 %)     conserved hypothetical protein (xxxX) {Bradyrhizobium japonicum}
2578.1  1.1      29 % (Q: 93.8 %/S: 97.0 %)     conserved hypothetical protein (xxxX) {Rhodobacter capsulatus}
2581.1  1.1      49 % (Q: 98.8 %/S: 94.7 %)     conserved hypothetical protein (xxxX) {Zymomonas mobilis}
2585.1  1.1      46 % (Q:100.4 %/S: 82.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2586.1  1.1      46 % (Q: 86.2 %/S: 83.3 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
2589.1  1.1      55 % (Q:100.7 %/S:100.0 %)     conserved hypothetical protein {}
2590.1  1.1      48 % (Q: 95.0 %/S: 95.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2592.1  1.1      35 % (Q: 87.6 %/S: 72.6 %)     conserved hypothetical protein {}
2593.1  1.1      36 % (Q: 91.4 %/S: 94.5 %)     conserved hypothetical protein (xxxX) {Thermotoga maritima}
2594.1  1.1      53 % (Q: 96.5 %/S: 97.2 %)     conserved hypothetical protein (xxxX) {Mycobacterium tuberculosis}
2595.1  1.1      63 % (Q:103.5 %/S: 99.7 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
2599.1  1.1      72 % (Q: 93.4 %/S: 64.7 %)     conserved hypothetical protein (xxxX) {Haemophilus influenzae}
2602.1  1.1      48 % (Q: 97.1 %/S: 98.5 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
2603.1  1.1      26 % (Q: 76.8 %/S: 78.2 %)     conserved hypothetical protein {}
2604.1  1.1      34 % (Q: 69.3 %/S: 51.4 %)     conserved hypothetical protein {}
2611.1  1.1      40 % (Q:100.0 %/S:101.4 %)     conserved hypothetical protein (xxxX) {Bradyrhizobium japonicum}
2617.1  1.1      34 % (Q:100.9 %/S:117.5 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
2623.1  1.1      70 % (Q: 95.5 %/S: 91.3 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
2626.1  1.1      27 % (Q:110.2 %/S:103.6 %)     conserved hypothetical protein {}
2628.1  1.1      65 % (Q: 92.5 %/S: 91.2 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2629.1  1.1      66 % (Q: 84.0 %/S: 82.7 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
2640.1  2.1      24 % (Q:101.5 %/S: 99.4 %)     conserved hypothetical protein (xxxX) {Thermotoga maritima}
2644.1  2.1      25 % (Q: 97.3 %/S: 94.5 %)     conserved hypothetical protein (xxxX) {Caulobacter crescentus}
2649.1  2.1      35 % (Q: 91.7 %/S: 96.6 %)     conserved hypothetical protein (xxxX) {Synechocystis sp. PCC 6803}
2651.1  2.1      30 % (Q: 97.1 %/S: 98.3 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2655.1  2.1      36 % (Q: 89.8 %/S: 89.8 %)     conserved hypothetical protein (xxxX) {Streptomyces pristinaespiralis}
2664.1  2.1      31 % (Q: 94.6 %/S: 95.6 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
2673.1  2.1      33 % (Q: 87.6 %/S: 89.1 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
2704.1  2.1      46 % (Q: 98.9 %/S: 98.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2719.1  1.1      31 % (Q: 76.5 %/S: 79.7 %)     conserved hypothetical protein (xxxX) {Corynebacterium glutamicum}
2720.1  1.1      43 % (Q: 99.7 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
2736.1  1.1      69 % (Q: 96.6 %/S: 93.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2739.1  1.1      79 % (Q: 97.2 %/S: 97.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2750.1  1.1      30 % (Q:103.3 %/S: 93.6 %)     conserved hypothetical protein (xxxX) {xxx}
2754.1  1.1      40 % (Q: 98.8 %/S: 98.6 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2756.1  1.1      40 % (Q: 92.3 %/S: 82.3 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2768.1  1.1      33 % (Q: 97.4 %/S: 97.7 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
2774.1  1.1      72 % (Q: 86.9 %/S: 98.7 %)     conserved hypothetical protein (xxxX) {Leishmania major}
2777.1  1.1      29 % (Q:100.0 %/S: 91.7 %)     conserved hypothetical protein (xxxX) {xxx}
2781.1  1.1      55 % (Q:102.9 %/S: 97.2 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2783.1  1.1      66 % (Q: 99.1 %/S: 93.1 %)     conserved hypothetical protein (xxxX) {syphilis treponeme}
2789.1  1.1      46 % (Q: 92.9 %/S: 97.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2793.1  1.1      60 % (Q:100.9 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
2794.1  1.1      41 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis Z2491}
2795.1  1.1      55 % (Q: 82.0 %/S: 76.6 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2804.1  1.1      56 % (Q: 94.9 %/S: 93.1 %)     conserved hypothetical protein (xxxX) {Rhizobium rhizogenes}
2815.1  1.1      38 % (Q: 98.6 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Salmonella typhimurium}
2820.1  1.1      54 % (Q: 91.9 %/S: 93.2 %)     conserved hypothetical protein (xxxX) {Synechocystis sp. PCC6803}
2822.1  1.1      26 % (Q:124.1 %/S: 97.8 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
2825.1  1.1      56 % (Q: 99.3 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
2830.1  1.1      61 % (Q:100.7 %/S:100.3 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2833.1  1.1      46 % (Q: 97.9 %/S: 98.3 %)     conserved hypothetical protein (xxxX) {Zymomonas mobilis}
2834.1  1.1      67 % (Q: 98.8 %/S: 99.0 %)     conserved hypothetical protein (xxxX) {Methanobacterium thermoautotrophicum (strain Delta H)}
2842.1  1.1      46 % (Q: 95.7 %/S: 95.4 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
2850.1  3.1      43 % (Q: 98.2 %/S: 96.4 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
2856.1  3.1      27 % (Q: 89.2 %/S: 86.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2868.1  3.1      40 % (Q: 94.1 %/S: 98.3 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
2872.1  3.1      47 % (Q: 99.0 %/S: 95.4 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
2874.1  3.1      49 % (Q: 94.4 %/S: 95.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
2875.1  3.1      65 % (Q: 84.5 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
2880.1  3.1      72 % (Q: 99.0 %/S: 98.0 %)     conserved hypothetical protein (xxxX) {xxx}
2896.1  3.1      35 % (Q: 94.8 %/S: 94.1 %)     conserved hypothetical protein (xxxX) {Stigmatella aurantiaca}
2903.1  3.1      67 % (Q: 99.6 %/S: 97.5 %)     conserved hypothetical protein (xxxX) {Acidithiobacillus ferrooxidans}
2904.1  3.1      44 % (Q: 98.8 %/S: 99.5 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
2910.1  3.1      29 % (Q: 87.1 %/S: 84.7 %)     conserved hypothetical protein (xxxX) {Alcaligenes eutrophus}
2915.1  4.1      56 % (Q: 88.2 %/S: 72.8 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
2916.1  4.1     100 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
2921.1  4.1     100 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
2923.1  4.1     100 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens SAKURA}
2925.1  4.1      98 % (Q: 92.9 %/S: 77.3 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens SAKURA}
2926.1  4.1     100 % (Q: 39.6 %/S: 46.2 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens SAKURA}
2927.1  4.1      99 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens SAKURA}
2957.1  4.1     100 % (Q:100.0 %/S: 83.5 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens C58}
2958.1  4.1     100 % (Q:100.0 %/S: 95.1 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
2959.1  4.1      98 % (Q: 87.7 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens SAKURA}
2983.1  4.1     100 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
2993.1  1.1      52 % (Q: 89.8 %/S: 98.4 %)     conserved hypothetical protein (xxxX) {Pyrococcus abyssi}
2997.1  1.1      32 % (Q: 92.7 %/S: 93.2 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
2999.1  1.1      34 % (Q:100.4 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas fluorescens}
3001.1  1.1      51 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3013.1  1.1      40 % (Q: 98.8 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
3014.1  1.1      56 % (Q: 98.9 %/S:104.8 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
3015.1  1.1      68 % (Q: 99.3 %/S: 98.7 %)     conserved hypothetical protein (xxxX) {Haemophilus influenzae Rd}
3020.1  1.1      60 % (Q: 53.0 %/S: 60.4 %)     conserved hypothetical protein {}
3025.1  1.1      49 % (Q: 88.2 %/S: 78.9 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
3026.1  1.1      74 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Zea mays}
3027.1  1.1      41 % (Q:104.6 %/S:101.1 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
3038.1  1.1      57 % (Q: 72.7 %/S: 93.7 %)     conserved hypothetical protein (xxxX) {Lactococcus lactis subsp. lactis}
3040.1  1.1      53 % (Q: 94.5 %/S: 94.5 %)     conserved hypothetical protein (xxxX) {Mycobacterium tuberculosis}
3042.1  1.1      49 % (Q: 99.6 %/S: 95.3 %)     conserved hypothetical protein (xxxX) {Mycobacterium tuberculosis}
3044.1  1.1      54 % (Q: 91.9 %/S: 47.6 %)     conserved hypothetical protein {}
3045.1  1.1      63 % (Q:103.3 %/S: 95.2 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3073.1  2.1      70 % (Q: 99.2 %/S: 92.9 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3074.1  2.1      57 % (Q: 97.4 %/S: 98.3 %)     conserved hypothetical protein (xxxX) {Ralstonia solanacearum}
3092.1  2.1      58 % (Q:100.2 %/S: 99.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3095.1  2.1      70 % (Q: 99.1 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
3102.1  2.1      62 % (Q: 99.5 %/S: 98.6 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
3119.1  1.1      54 % (Q: 94.0 %/S: 93.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3120.1  1.1      57 % (Q: 88.9 %/S: 94.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3121.1  1.1      59 % (Q: 81.0 %/S: 97.1 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
3129.1  1.1      56 % (Q: 92.2 %/S: 96.4 %)     conserved hypothetical protein (xxxX) {Rhizobium leguminosarum}
3130.1  1.1      40 % (Q: 85.6 %/S: 92.0 %)     conserved hypothetical protein (xxxX) {Yersinia pestis}
3131.1  1.1      36 % (Q: 89.9 %/S: 82.6 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3136.1  1.1      46 % (Q: 92.0 %/S: 87.0 %)     conserved hypothetical protein (xxxX) {Salmonella enterica}
3137.1  1.1      32 % (Q:103.7 %/S: 93.9 %)     conserved hypothetical protein (xxxX) {Salmonella enterica}
3138.1  1.1      58 % (Q: 98.6 %/S: 99.8 %)     conserved hypothetical protein (xxxX) {Salmonella enterica}
3148.1  1.1      67 % (Q: 71.5 %/S: 92.7 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
3152.1  1.1      52 % (Q: 98.2 %/S: 93.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa PAO1}
3160.1  1.1      81 % (Q:100.0 %/S: 99.2 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
3182.1  1.1      38 % (Q: 97.7 %/S: 96.0 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
3184.1  1.1      25 % (Q: 55.2 %/S: 51.0 %)     conserved hypothetical protein (xxxX) {Borrelia burgdorferi}
3185.1  1.1      38 % (Q: 30.5 %/S: 74.9 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
3189.1  1.1      34 % (Q:107.0 %/S:100.6 %)     conserved hypothetical protein (xxxX) {Synechocystis sp}
3200.1  1.1      30 % (Q: 94.4 %/S: 94.2 %)     conserved hypothetical protein (xxxX) {Synechocystis sp}
3204.1  1.1      73 % (Q: 88.9 %/S:100.7 %)     conserved hypothetical protein (xxxX) {Zymomonas mobilis}
3214.1  1.1      53 % (Q: 91.3 %/S: 97.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3218.1  1.1      37 % (Q:101.3 %/S: 77.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3227.1  1.1      49 % (Q:100.6 %/S: 98.2 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
3237.1  1.1      69 % (Q: 96.7 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3239.1  1.1      49 % (Q: 97.6 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3244.1  1.1      40 % (Q: 90.3 %/S: 90.7 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens SAKURA}
3245.1  1.1      70 % (Q: 97.5 %/S: 92.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3247.1  1.1      33 % (Q: 86.7 %/S: 86.0 %)     conserved hypothetical protein (xxxX) {Methanococcus jannaschii}
3248.1  1.1      49 % (Q: 84.8 %/S: 97.9 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis}
3249.1  1.1      60 % (Q: 97.0 %/S: 33.9 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3250.1  1.1      65 % (Q: 96.7 %/S: 62.9 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3252.1  1.1      39 % (Q: 94.8 %/S: 39.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3255.1  1.1      63 % (Q: 84.4 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens SAKURA}
3256.1  1.1      63 % (Q: 96.9 %/S: 97.7 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis}
3257.1  1.1      49 % (Q: 91.7 %/S: 91.7 %)     conserved hypothetical protein (xxxX) {Rhizobium leguminosarum bv. viciae}
3258.1  1.1      41 % (Q: 92.1 %/S: 96.2 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3259.1  1.1      74 % (Q: 98.4 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3260.1  1.1      61 % (Q: 99.7 %/S: 99.7 %)     conserved hypothetical protein (xxxX) {Synechocystis sp}
3261.1  1.1      56 % (Q: 96.7 %/S:100.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3265.1  1.1     100 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (gguC) {Agrobacterium tumefaciens}
3270.1  1.1      59 % (Q: 23.4 %/S: 80.4 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
3288.1  1.1      76 % (Q: 99.0 %/S: 96.0 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
3289.1  1.1      69 % (Q:100.0 %/S: 99.4 %)     conserved hypothetical protein (xxxX) {Pasteurella multocida}
3290.1  1.1      83 % (Q: 99.8 %/S: 99.8 %)     conserved hypothetical protein (xxxX) {Ralstonia sp. TFD41}
3293.1  1.1      76 % (Q:100.0 %/S:101.8 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
3294.1  1.1      72 % (Q: 95.5 %/S: 95.5 %)     conserved hypothetical protein (xxxX) {Arabidopsis thaliana}
3297.1  1.1      49 % (Q: 88.4 %/S: 93.1 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis}
3305.1  1.1      42 % (Q: 97.4 %/S: 98.7 %)     conserved hypothetical protein (xxxX) {Mycobacterium tuberculosis}
3309.1  1.1      64 % (Q: 95.9 %/S: 95.9 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
3310.1  1.1      71 % (Q:100.0 %/S: 99.5 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
3315.1  1.1      54 % (Q: 59.4 %/S: 96.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3317.1  1.1      45 % (Q: 88.0 %/S: 89.7 %)     conserved hypothetical protein (xxxX) {Bartonella bacilliformis}
3318.1  1.1      57 % (Q: 99.4 %/S: 99.4 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis}
3319.1  1.1      69 % (Q: 72.8 %/S: 94.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3328.1  1.1      69 % (Q: 95.9 %/S: 69.7 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
3332.1  1.1      53 % (Q: 84.6 %/S: 99.5 %)     conserved hypothetical protein (xxxX) {Paracoccus denitrificans}
3367.1  2.1      29 % (Q: 89.4 %/S: 87.1 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
3376.1  2.1      49 % (Q: 97.5 %/S:100.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3386.1  2.1      52 % (Q: 82.1 %/S: 79.9 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
3387.1  2.1      78 % (Q:100.5 %/S:100.5 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
3390.1  2.1      51 % (Q: 97.5 %/S: 93.8 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
3412.1  2.1      44 % (Q:106.2 %/S: 98.6 %)     conserved hypothetical protein (xxxX) {Burkholderia pseudomallei}
3425.1  1.1      22 % (Q: 82.2 %/S: 79.1 %)     conserved hypothetical protein {}
3427.1  1.1      73 % (Q: 96.9 %/S: 96.9 %)     conserved hypothetical protein (xxxX) {Bartonella bacilliformis}
3429.1  1.1      69 % (Q:105.5 %/S: 98.4 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
3447.1  1.1      70 % (Q: 93.6 %/S: 95.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas denitrificans}
3460.1  1.1      39 % (Q:101.2 %/S: 99.5 %)     conserved hypothetical protein {}
3465.1  1.1      43 % (Q:102.6 %/S:105.3 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
3467.1  1.1      41 % (Q: 99.4 %/S: 93.9 %)     conserved hypothetical protein (xxxX) {Butyrivibrio fibrisolvens}
3483.1  1.1      56 % (Q: 93.8 %/S: 92.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3484.1  1.1      52 % (Q: 93.0 %/S: 94.9 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
3489.1  1.1      65 % (Q: 95.3 %/S:101.2 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3495.1  1.1      59 % (Q: 97.5 %/S: 91.1 %)     conserved hypothetical protein (xxxX) {Rhizobium meliloti}
3496.1  1.1      51 % (Q: 70.0 %/S: 94.4 %)     conserved hypothetical protein (xxxX) {Lactococcus lactis subsp. lactis}
3514.1  1.1      58 % (Q:100.7 %/S: 97.7 %)     conserved hypothetical protein (xxxX) {Halobacterium sp. NRC-1}
3517.1  1.1      65 % (Q: 96.7 %/S: 93.6 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3518.1  1.1      64 % (Q: 93.6 %/S: 90.1 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
3519.1  1.1      40 % (Q: 88.5 %/S: 91.9 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3520.1  1.1      46 % (Q: 98.9 %/S: 98.1 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
3522.1  1.1      55 % (Q:100.0 %/S: 87.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3526.1  1.1      26 % (Q: 64.4 %/S: 99.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3527.1  1.1      66 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3528.1  1.1      65 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
3544.1  1.1      22 % (Q: 72.4 %/S: 82.6 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis MC58}
3548.1  1.1      60 % (Q: 93.9 %/S: 94.3 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
3549.1  1.1      73 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Pyrococcus abyssi}
3550.1  1.1      44 % (Q: 84.4 %/S: 83.2 %)     conserved hypothetical protein (xxxX) {Campylobacter jejuni}
3553.1  1.1      27 % (Q: 80.5 %/S: 94.9 %)     conserved hypothetical protein (xxxX) {Synechocystis sp}
3557.1  1.1      40 % (Q: 99.5 %/S:100.5 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
3560.1  1.1      68 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
3563.1  1.1      65 % (Q: 88.2 %/S: 94.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3567.1  1.1      61 % (Q: 88.7 %/S: 94.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas stutzeri}
3569.1  1.1      32 % (Q: 73.7 %/S: 87.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3570.1  1.1      63 % (Q: 96.0 %/S: 84.3 %)     conserved hypothetical protein (xxxX) {Pseudomonas aerugonosa}
3581.1  1.1      56 % (Q: 94.1 %/S: 98.9 %)     conserved hypothetical protein (xxxX) {Arabidopsis thaliana}
3585.1  1.1      55 % (Q: 85.9 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
3586.1  1.1      65 % (Q:100.0 %/S: 98.3 %)     conserved hypothetical protein {}
3587.1  1.1      46 % (Q:101.4 %/S:100.8 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
3588.1  1.1      52 % (Q: 90.9 %/S: 91.2 %)     conserved hypothetical protein (xxxX) {Sphingomonas sp. S88}
3590.1  1.1      50 % (Q: 94.3 %/S: 58.2 %)     conserved hypothetical protein (xxxX) {Halobacterium sp. NRC-1}
3592.1  1.1      28 % (Q: 96.5 %/S: 91.2 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
3593.1  1.1      31 % (Q: 99.7 %/S: 75.6 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
3595.1  1.1      88 % (Q:103.2 %/S:100.6 %)     conserved hypothetical protein (aau3) {Rhizobium meliloti}
3596.1  1.1      24 % (Q: 95.7 %/S: 95.1 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
3615.1  1.1      49 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (phnG) {Sinorhizobium meliloti}
3616.1  1.1      52 % (Q: 97.5 %/S: 99.0 %)     conserved hypothetical protein (phnH) {Sinorhizobium meliloti}
3617.1  1.1      80 % (Q:100.0 %/S:100.3 %)     conserved hypothetical protein (phnI) {Sinorhizobium meliloti}
3618.1  1.1      90 % (Q: 98.0 %/S: 99.0 %)     conserved hypothetical protein (phnJ) {Sinorhizobium meliloti}
3625.1  2.1      32 % (Q:105.1 %/S: 88.0 %)     conserved hypothetical protein (myg1) {Homo sapiens}
3632.1  2.1      61 % (Q: 83.7 %/S: 80.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3634.1  2.1      56 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
3665.1  2.1      33 % (Q: 43.5 %/S: 47.6 %)     conserved hypothetical protein (xxxX) {Photorhabdus luminescens}
3667.1  2.1      56 % (Q: 51.9 %/S: 90.9 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
3670.1  2.1      76 % (Q:101.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Mycobacterium leprae}
3671.1  2.1      61 % (Q: 97.6 %/S: 97.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3672.1  2.1      60 % (Q: 99.7 %/S: 99.0 %)     conserved hypothetical protein (xxxX) {Triticum aestivum}
3678.1  2.1      28 % (Q: 96.3 %/S: 99.4 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
3689.1  2.1      60 % (Q: 96.6 %/S: 90.7 %)     conserved hypothetical protein (xxxX) {Rhizobium rhizogenes}
3693.1  2.1      73 % (Q: 96.5 %/S: 96.0 %)     conserved hypothetical protein (xxxX) {Brucella melitensis biovar Abortus}
3696.1  2.1      85 % (Q:100.2 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Thermococcus litoralis}
3697.1  2.1      80 % (Q: 94.8 %/S: 94.8 %)     conserved hypothetical protein {}
3715.1  2.1      57 % (Q: 98.4 %/S: 99.6 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3-2}
3716.1  2.1      61 % (Q: 95.9 %/S: 93.1 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
3718.1  2.1      66 % (Q: 99.3 %/S: 98.6 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3719.1  2.1      69 % (Q: 96.1 %/S: 96.8 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
3721.1  2.1      54 % (Q: 91.1 %/S: 93.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3722.1  2.1      39 % (Q:101.0 %/S: 94.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3733.1  2.1      85 % (Q: 95.9 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
3742.1  2.1      42 % (Q: 94.7 %/S: 97.6 %)     conserved hypothetical protein (xxxX) {Pyrococcus abyssi}
3743.1  2.1      39 % (Q: 98.5 %/S:105.2 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis}
3744.1  2.1      40 % (Q: 89.8 %/S: 96.8 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
3750.1  2.1      52 % (Q: 91.4 %/S: 92.8 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
3753.1  2.1      45 % (Q: 91.0 %/S: 84.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3757.1  2.1      66 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
3765.1  2.1      62 % (Q:101.1 %/S:100.6 %)     conserved hypothetical protein (atsA) {Agrobacterium tumefaciens}
3767.1  2.1      59 % (Q: 99.1 %/S: 99.8 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
3781.1  2.1      88 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Clostridium barkeri}
3797.1  2.1      60 % (Q: 90.7 %/S: 94.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3814.1  2.1      46 % (Q: 72.0 %/S: 81.3 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
3818.1  2.1      30 % (Q: 87.3 %/S: 82.5 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
3819.1  2.1      34 % (Q:100.5 %/S:105.3 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
3837.1  3.1      58 % (Q: 96.6 %/S:100.6 %)     conserved hypothetical protein (xxxX) {xxx}
3838.1  3.1     100 % (Q:100.0 %/S: 93.7 %)     conserved hypothetical protein (atsE) {Agrobacterium tumefaciens}
3845.1  3.1      31 % (Q: 94.8 %/S: 52.7 %)     conserved hypothetical protein {}
3851.1  3.1      96 % (Q: 90.8 %/S: 75.6 %)     conserved hypothetical protein (attU) {Agrobacterium tumefaciens}
3857.1  3.1      37 % (Q: 95.8 %/S:101.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3881.1  3.1      27 % (Q: 97.7 %/S: 94.3 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
3886.1  3.1      55 % (Q: 74.8 %/S: 37.7 %)     conserved hypothetical protein (xxxX) {Rhizobium sp. NGR234}
3888.1  3.1      74 % (Q:101.9 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
3890.1  3.1      83 % (Q: 99.0 %/S: 99.0 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
3892.1  3.1      65 % (Q: 83.2 %/S: 39.5 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens pTiSAKURA}
3894.1  3.1      67 % (Q: 94.0 %/S: 99.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3896.1  3.1      46 % (Q: 93.8 %/S:103.0 %)     conserved hypothetical protein (xxxX) {Halobacterium sp}
3900.1  3.1      23 % (Q: 91.9 %/S: 92.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3901.1  3.1      35 % (Q: 78.5 %/S: 95.6 %)     conserved hypothetical protein (xxxX) {Agrobacterium sp. ATCC31749}
3902.1  3.1      21 % (Q: 98.8 %/S: 51.6 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
3904.1  3.1      82 % (Q: 98.8 %/S: 98.5 %)     conserved hypothetical protein (xxxX) {Synechocystis PCC 6803}
3908.1  3.1      61 % (Q: 95.2 %/S: 84.4 %)     conserved hypothetical protein (xxxX) {Thermotoga maritima}
3914.1  3.1      23 % (Q:122.2 %/S:101.2 %)     conserved hypothetical protein (xxxX) {Pasteurella multocida}
3918.1  3.1      25 % (Q: 93.7 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Arabidopsis thaliana}
3924.1  3.1      58 % (Q:100.0 %/S: 98.5 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
3933.1  3.1      54 % (Q:103.7 %/S: 94.9 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
3937.1  3.1      86 % (Q:100.0 %/S:100.7 %)     conserved hypothetical protein (xxxX) {Archaeoglobus fulgidus}
3938.1  3.1      79 % (Q: 93.0 %/S: 96.2 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
3941.1  3.1      27 % (Q: 96.3 %/S:106.8 %)     conserved hypothetical protein (xxxX) {Halobacterium sp}
3945.1  3.1      29 % (Q: 52.3 %/S: 55.7 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
3946.1  3.1      70 % (Q: 97.2 %/S: 94.1 %)     conserved hypothetical protein (xxxX) {Halobacterium sp}
3952.1  3.1      24 % (Q: 61.7 %/S: 30.0 %)     conserved hypothetical protein (xxxX) {Burkholderia pseudomallei}
3958.1  3.1      64 % (Q: 61.8 %/S: 38.0 %)     conserved hypothetical protein (xxxX) {Rhizobium leguminosarum}
3960.1  3.1      26 % (Q:107.8 %/S:102.3 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3961.1  3.1      40 % (Q: 97.2 %/S: 96.5 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
3962.1  3.1      42 % (Q: 87.2 %/S: 91.5 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
3963.1  3.1      42 % (Q: 93.8 %/S: 98.4 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
3964.1  3.1      54 % (Q: 17.5 %/S: 61.5 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
3966.1  3.1      82 % (Q: 99.5 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Rhizobium sp. (strain NGR234)}
3971.1  3.1      42 % (Q: 94.5 %/S: 91.3 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
3973.1  2.1      62 % (Q: 98.7 %/S: 98.1 %)     conserved hypothetical protein (xxxX) {Rhodobacter sphaeroides}
3976.1  2.1      55 % (Q: 72.4 %/S: 82.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
3977.1  2.1      72 % (Q: 98.4 %/S: 95.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4002.1  2.1      50 % (Q: 99.8 %/S:101.9 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
4012.1  2.1      30 % (Q: 97.5 %/S: 95.5 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis}
4015.1  2.1      26 % (Q: 89.0 %/S: 97.0 %)     conserved hypothetical protein (xxxX) {Thermotoga maritima}
4017.1  2.1      77 % (Q: 97.1 %/S: 98.4 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
4019.1  2.1      57 % (Q: 78.1 %/S: 95.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4020.1  2.1      73 % (Q: 94.1 %/S: 98.2 %)     conserved hypothetical protein (xxxx) {Pseudomonas aeruginosa}
4028.1  2.1      64 % (Q: 96.5 %/S:101.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4033.1  2.1      31 % (Q: 99.5 %/S:101.6 %)     conserved hypothetical protein (xxxX) {xxx}
4035.1  2.1      34 % (Q: 81.3 %/S: 93.1 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
4036.1  2.1      63 % (Q: 94.9 %/S: 94.7 %)     conserved hypothetical protein (xxxX) {Rhizobium strain NGR234}
4037.1  2.1      73 % (Q:100.6 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
4043.1  2.1      55 % (Q: 98.5 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Thermotoga maritima}
4049.1  2.1      51 % (Q: 96.9 %/S: 99.4 %)     conserved hypothetical protein (xxxX) {Rhizobium sp. NGR234}
4054.1  2.1      56 % (Q: 81.0 %/S: 88.6 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4055.1  2.1      64 % (Q: 89.9 %/S: 87.1 %)     conserved hypothetical protein (xxxX) {xxx}
4056.1  2.1      50 % (Q: 98.6 %/S: 98.6 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
4058.1  2.1      45 % (Q:100.0 %/S: 90.4 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
4060.1  2.1      26 % (Q: 39.3 %/S: 44.8 %)     conserved hypothetical protein (xxxX) {Homo sapiens}
4063.1  2.1      43 % (Q: 83.9 %/S: 76.2 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
4064.1  2.1      30 % (Q: 96.2 %/S: 92.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4066.1  2.1      24 % (Q: 99.7 %/S: 95.6 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4067.1  2.1      43 % (Q: 92.7 %/S: 91.2 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4068.1  2.1      53 % (Q:100.2 %/S: 99.8 %)     conserved hypothetical protein (xxxX) {Edwardsiella ictaluri}
4069.1  2.1      39 % (Q: 91.4 %/S: 88.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4071.1  2.1      29 % (Q: 90.5 %/S: 96.8 %)     conserved hypothetical protein (xxxX) {Edwardsiella ictaluri}
4072.1  2.1      34 % (Q:104.7 %/S:100.3 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4073.1  2.1      27 % (Q: 89.2 %/S: 85.6 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4074.1  2.1      37 % (Q: 22.6 %/S: 18.5 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4075.1  2.1      43 % (Q: 99.8 %/S:100.2 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4100.1  2.1      65 % (Q: 97.4 %/S: 95.7 %)     conserved hypothetical protein (xxxX) {Bradyrhizobium japonicum}
4101.1  2.1      60 % (Q: 91.0 %/S:100.3 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
4104.1  2.1      54 % (Q: 78.0 %/S: 94.4 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
4105.1  2.1      55 % (Q:100.7 %/S: 99.3 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
4116.1  2.1      50 % (Q: 96.2 %/S: 68.5 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
4118.1  2.1      50 % (Q: 95.6 %/S: 77.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4119.1  2.1      52 % (Q: 86.0 %/S: 99.2 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4144.1  2.1      38 % (Q: 97.1 %/S: 90.8 %)     conserved hypothetical protein (xxxX) {Mycobacterium tuberculosis}
4164.1  2.1      66 % (Q:100.0 %/S: 97.6 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
4168.1  2.1      60 % (Q: 95.9 %/S: 94.7 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis}
4169.1  2.1      31 % (Q: 67.9 %/S: 14.6 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4176.1  2.1      35 % (Q: 85.2 %/S:104.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4200.1  2.1      67 % (Q: 74.1 %/S: 98.1 %)     conserved hypothetical protein (xxxX) {Salmonella typhimurium}
4201.1  2.1      34 % (Q: 82.6 %/S: 61.9 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
4203.1  2.1      45 % (Q: 94.8 %/S: 97.5 %)     conserved hypothetical protein (xxxX) {xxx}
4204.1  2.1      48 % (Q: 98.6 %/S: 73.1 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
4206.1  2.1      28 % (Q: 74.6 %/S: 33.6 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
4207.1  2.1      28 % (Q: 66.1 %/S: 66.7 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
4211.1  2.1      61 % (Q: 95.4 %/S: 92.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4223.1  2.1      34 % (Q: 97.9 %/S: 42.9 %)     conserved hypothetical protein (xxxX) {xxx}
4226.1  2.1      70 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
4232.1  2.1      39 % (Q:120.3 %/S: 98.7 %)     conserved hypothetical protein (xxxX) {xxx}
4234.1  2.1      51 % (Q: 71.8 %/S: 97.7 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
4251.1  1.1      53 % (Q: 95.8 %/S: 93.8 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3-2}
4257.1  1.1      23 % (Q: 82.7 %/S: 37.2 %)     conserved hypothetical protein (xxxX) {Methanococcus maripaludis}
4266.1  1.1      51 % (Q: 96.0 %/S: 94.8 %)     conserved hypothetical protein (xxxX) {Cymbidium mosaic virus}
4267.1  1.1      27 % (Q: 77.6 %/S: 48.6 %)     conserved hypothetical protein (xxxX) {Schizosaccharomyces pombe}
4272.1  1.1      72 % (Q: 98.3 %/S: 97.8 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
4274.1  1.1      60 % (Q: 97.9 %/S: 93.3 %)     conserved hypothetical protein (redA) {Synechocystis sp}
4277.1  1.1      40 % (Q:101.5 %/S: 94.3 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
4292.1  1.1      39 % (Q: 74.4 %/S: 73.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4295.1  1.1      49 % (Q: 99.0 %/S: 99.0 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
4296.1  1.1      39 % (Q: 91.2 %/S: 53.3 %)     conserved hypothetical protein (xxxX) {Zymomonas mobilis}
4307.1  1.1      47 % (Q: 93.2 %/S: 96.3 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
4308.1  1.1      29 % (Q:104.2 %/S: 98.3 %)     conserved hypothetical protein (xxxX) {Rhodobacter sphaeroides}
4316.1  1.1      58 % (Q: 97.9 %/S: 93.6 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4317.1  1.1      39 % (Q: 92.8 %/S: 94.4 %)     conserved hypothetical protein (xxxX) {Brucella abortus 1}
4322.1  1.1      69 % (Q: 97.2 %/S: 95.4 %)     conserved hypothetical protein (xxxX) {Caenorhabditis elegans}
4323.1  1.1      66 % (Q: 95.9 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Roseobacter denitrificans}
4327.1  1.1      37 % (Q:113.9 %/S: 69.6 %)     conserved hypothetical protein (xxxX) {Halobacterium sp. NRC-1}
4328.1  1.1      49 % (Q:100.9 %/S:102.3 %)     conserved hypothetical protein (xxxX) {Leishmania major}
4331.1  1.1      51 % (Q: 50.3 %/S: 90.2 %)     conserved hypothetical protein {}
4343.1  1.1      57 % (Q: 98.1 %/S: 95.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4344.1  1.1      83 % (Q: 98.7 %/S: 93.9 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4351.1  1.1      62 % (Q: 99.3 %/S: 99.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4352.1  1.1      74 % (Q: 96.5 %/S: 97.7 %)     conserved hypothetical protein (xxxX) {Zymomonas mobilis}
4353.1  1.1      52 % (Q: 82.4 %/S: 81.2 %)     conserved hypothetical protein (xxxX) {Arabidopsis thaliana}
4362.1  1.1      69 % (Q:100.2 %/S: 95.3 %)     conserved hypothetical protein (xxxX) {Rickettsia prowazekii}
4364.1  1.1      64 % (Q: 93.8 %/S: 95.4 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
4366.1  2.1      59 % (Q: 90.0 %/S: 98.7 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
4371.1  2.1      27 % (Q: 92.8 %/S: 55.0 %)     conserved hypothetical protein (xxxX) {Aquifex aeolicus}
4373.1  2.1      30 % (Q: 21.1 %/S: 62.4 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4374.1  2.1      31 % (Q: 96.2 %/S: 89.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4376.1  2.1      33 % (Q: 95.4 %/S: 45.8 %)     conserved hypothetical protein (xxxX) {Bradyrhizobium japonicum}
4377.1  2.1      28 % (Q: 92.1 %/S: 89.3 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
4378.1  2.1      61 % (Q: 96.3 %/S: 95.6 %)     conserved hypothetical protein (xxxX) {Homo sapiens}
4383.1  2.1      47 % (Q:100.0 %/S: 71.9 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolorA3(2)}
4386.1  2.1      49 % (Q: 94.3 %/S: 93.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa PAO1}
4389.1  2.1      30 % (Q: 55.9 %/S: 57.8 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis}
4391.1  2.1      32 % (Q: 76.9 %/S: 90.5 %)     conserved hypothetical protein (xxxX) {Neisseria meningitidis}
4392.1  2.1      32 % (Q: 94.0 %/S: 94.2 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
4398.1  2.1      38 % (Q: 40.3 %/S: 47.4 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
4400.1  2.1      54 % (Q: 89.9 %/S: 98.6 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4414.1  2.1      57 % (Q:100.6 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
4417.1  2.1      62 % (Q: 95.9 %/S: 98.2 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4420.1  2.1      28 % (Q:101.0 %/S: 92.8 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
4421.1  2.1      45 % (Q:100.5 %/S: 65.9 %)     conserved hypothetical protein (xxxX) {Rhodobacter capsulatus}
4428.1  2.1      37 % (Q:108.8 %/S: 96.8 %)     conserved hypothetical protein (xxxX) {Pseudomonas putida}
4431.1  2.1      47 % (Q:100.0 %/S:107.9 %)     conserved hypothetical protein (tolA) {salmonella typhi}
4434.1  2.1      53 % (Q: 97.9 %/S: 91.7 %)     conserved hypothetical protein (xxxX) {Haemophilus influenzae Rd}
4436.1  2.1      49 % (Q: 88.5 %/S: 95.5 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
4442.1  2.1      81 % (Q:100.0 %/S: 99.6 %)     conserved hypothetical protein (xxxX) {Aquifex aeolicus}
4443.1  2.1      25 % (Q: 54.0 %/S: 52.8 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
4444.1  2.1      32 % (Q: 93.1 %/S: 97.1 %)     conserved hypothetical protein (xxxX) {Thermotoga maritima}
4445.1  2.1      80 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Aquifex aeolicus}
4454.1  2.1      56 % (Q: 97.7 %/S: 94.4 %)     conserved hypothetical protein (xxxX) {Arabidopsis thaliana}
4456.1  2.1      66 % (Q: 98.9 %/S: 98.0 %)     conserved hypothetical protein (xxxX) {Deinococcus radiodurans}
4461.1  2.1      54 % (Q: 99.2 %/S: 98.4 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
4464.1  2.1      42 % (Q: 91.7 %/S: 93.6 %)     conserved hypothetical protein (xxxX) {Rhodobacter sphaeroides}
4465.1  2.1      69 % (Q: 96.5 %/S: 95.3 %)     conserved hypothetical protein (xxxX) {Methylobacterium extorquens}
4466.1  2.1      72 % (Q:100.0 %/S: 94.4 %)     conserved hypothetical protein (xxxX) {Methylobacterium extorquens}
4467.1  2.1      55 % (Q: 98.5 %/S: 97.4 %)     conserved hypothetical protein (xxxX) {Methylobacterium extorquens}
4468.1  2.1      54 % (Q: 95.6 %/S: 95.1 %)     conserved hypothetical protein (xxxX) {Methylobacterium extorquens}
4470.1  2.1      41 % (Q:108.5 %/S:102.4 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
4473.1  2.1      45 % (Q: 99.1 %/S: 95.0 %)     conserved hypothetical protein (xxxX) {Helicobacter pylori J99}
4479.1  2.1      70 % (Q: 87.4 %/S: 96.8 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
4480.1  2.1      55 % (Q: 96.8 %/S: 96.8 %)     conserved hypothetical protein (xxxX) {Xylella fastidiosa}
4484.1  2.1      46 % (Q: 83.2 %/S: 91.7 %)     conserved hypothetical protein (xxxX) {Campylobacter jejuni}
4496.1  2.1      59 % (Q: 99.2 %/S: 73.3 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
4497.1  2.1      63 % (Q: 93.3 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Agrobacterium tumefaciens}
4506.1  2.1      28 % (Q:101.1 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
4514.1  2.1      41 % (Q: 92.3 %/S: 96.4 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
4516.1  2.1      37 % (Q: 98.6 %/S: 97.8 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
4527.1  2.1      29 % (Q:104.1 %/S: 86.5 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
4538.1  2.1      57 % (Q: 99.2 %/S: 99.2 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
4540.1  2.1      61 % (Q: 95.7 %/S: 95.0 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
4542.1  2.1      42 % (Q:100.0 %/S: 97.6 %)     conserved hypothetical protein (xxxX) {Bacillus subtilis}
4559.1  2.1      33 % (Q: 29.0 %/S:  7.0 %)     conserved hypothetical protein (xxxX) {xxx}
4562.1  2.1      70 % (Q: 99.4 %/S: 98.1 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4572.1  2.1      58 % (Q:100.0 %/S:100.3 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
4575.1  2.1      29 % (Q: 78.9 %/S: 78.4 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
4583.1  2.1      56 % (Q: 99.5 %/S: 99.7 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
4584.1  2.1      47 % (Q: 98.5 %/S: 93.7 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3-2}
4585.1  2.1      38 % (Q:101.9 %/S: 97.4 %)     conserved hypothetical protein (xxxX) {Bacillus halodurans}
4599.1  2.1      29 % (Q: 93.8 %/S: 94.8 %)     conserved hypothetical protein (xxxX) {Yersinia pestis}
4600.1  2.1      34 % (Q:102.1 %/S: 99.2 %)     conserved hypothetical protein (xxxX) {Escherichia coli K12}
4604.1  2.1      46 % (Q: 99.2 %/S: 97.8 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
4641.1  2.1      59 % (Q: 90.7 %/S: 98.9 %)     conserved hypothetical protein (xxxX) {Methanococcus jannaschii}
4647.1  2.1      81 % (Q: 94.7 %/S: 47.4 %)     conserved hypothetical protein (xxxX) {Rhizobium sp}
4659.1  2.1      39 % (Q: 88.1 %/S: 83.2 %)     conserved hypothetical protein {}
4663.1  2.1      35 % (Q: 70.6 %/S: 87.6 %)     conserved hypothetical protein (xxxX) {Rhizobium sp}
4677.1  2.1      55 % (Q: 94.3 %/S: 97.2 %)     conserved hypothetical protein (bme3) {Brucella melitensis}
4678.1  2.1      49 % (Q: 57.8 %/S: 65.4 %)     conserved hypothetical protein (bme2) {Brucella melitensis}
4688.1  2.1      51 % (Q: 93.7 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
4690.1  2.1      47 % (Q: 94.2 %/S: 97.4 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor A3 (2)}
4692.1  2.1      45 % (Q: 98.1 %/S: 97.7 %)     conserved hypothetical protein (xxxX) {Streptomyces coelicolor}
4698.1  2.1      29 % (Q: 34.0 %/S: 53.7 %)     conserved hypothetical protein (xxxX) {Pyrococcus horikoshii}
4707.1  2.1      31 % (Q: 94.2 %/S: 91.0 %)     conserved hypothetical protein (xxxX) {Synechocystis sp. PCC6803}
4714.1  2.1      31 % (Q: 96.2 %/S: 93.1 %)     conserved hypothetical protein (xxxX) {Thermoplasma acidophilum}
4716.1  2.1      51 % (Q: 99.2 %/S: 98.8 %)     conserved hypothetical protein (xxxX) {Synechocystis sp}
4725.1  2.1      69 % (Q: 97.0 %/S: 93.7 %)     conserved hypothetical protein (xxxX) {Natronomonas pharaonis}
4730.1  2.1      34 % (Q: 97.3 %/S: 89.7 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4732.1  2.1      42 % (Q: 86.8 %/S: 92.7 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
4739.1  2.1      46 % (Q: 92.5 %/S: 94.3 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4746.1  2.1      58 % (Q: 89.7 %/S: 89.7 %)     conserved hypothetical protein (xxxX) {Myxococcus xanthus}
4749.1  2.1      43 % (Q:100.6 %/S: 93.3 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4752.1  2.1      75 % (Q:100.3 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Comamonas testosteroni}
4754.1  2.1      85 % (Q:100.0 %/S: 93.1 %)     conserved hypothetical protein (xxxX) {Escherichia coli}
5000.1  1.1      60 % (Q: 72.4 %/S: 56.4 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
5001.1  1.1      38 % (Q: 83.0 %/S: 71.5 %)     conserved hypothetical protein (xxxX) {Escherichia coli O157:H7}
5013.1  1.1      47 % (Q: 95.8 %/S:100.0 %)     conserved hypothetical protein {}
5017.1  1.1      34 % (Q: 93.1 %/S: 73.0 %)     conserved hypothetical protein {}
5019.1  1.1      37 % (Q: 54.5 %/S: 73.7 %)     conserved hypothetical Protein {}
5029.1  1.1      35 % (Q: 72.9 %/S: 77.8 %)     conserved hypothetical protein {}
5030.1  1.1      43 % (Q: 98.3 %/S:100.0 %)     conserved hypothetical protein {}
5040.1  1.1      40 % (Q: 80.5 %/S: 97.2 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
5042.1  1.1      30 % (Q: 67.3 %/S: 75.2 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
5043.1  1.1      46 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
5045.1  1.1      25 % (Q: 94.5 %/S: 97.6 %)     conserved hypothetical protein {}
5046.1  1.1      38 % (Q: 99.0 %/S:102.1 %)     conserved hypothetical protein {}
5047.1  1.1      48 % (Q: 87.6 %/S: 99.1 %)     conserved hypothetical protein {}
5050.1  1.1      30 % (Q: 92.7 %/S: 79.2 %)     conserved hypothetical protein {}
5051.1  1.1      57 % (Q: 99.5 %/S:102.4 %)     conserved hypothetical protein {}
5054.1  1.1      57 % (Q: 98.5 %/S: 87.3 %)     conserved hypothetical protein {}
5055.1  1.1      49 % (Q: 66.9 %/S: 95.7 %)     conserved hypothetical protein {}
5056.1  1.1      34 % (Q: 89.1 %/S:108.3 %)     conserved hypothetical protein {}
5058.1  1.1      40 % (Q:100.9 %/S:100.9 %)     conserved hypothetical protein {}
5059.1  1.1      65 % (Q:100.0 %/S: 73.5 %)     conserved hypothetical protein {}
5062.1  1.1      59 % (Q: 86.6 %/S: 78.5 %)     conserved hypothetical protein {}
5063.1  1.1      58 % (Q: 93.2 %/S: 87.3 %)     conserved hypothetical protein {}
5072.1  1.1      55 % (Q: 87.5 %/S: 97.5 %)     conserved hypothetical protein {}
5079.1  1.1      31 % (Q: 93.8 %/S: 84.5 %)     conserved hypothetical protein {}
5080.1  1.1      41 % (Q: 92.6 %/S: 90.9 %)     conserved hypothetical protein (xxxX) {Mesorbizobium loti}
5081.1  1.1      60 % (Q: 99.4 %/S: 94.6 %)     conserved hypothetical protein (xxxX) {Mesorbizobium loti}
5084.1  1.1      40 % (Q:116.2 %/S: 80.1 %)     conserved hypothetical protein {}
5088.1  1.1      25 % (Q: 95.3 %/S: 74.4 %)     conserved hypothetical protein {}
5090.1  1.1      32 % (Q: 92.1 %/S: 86.3 %)     conserved hypothetical protein {}
5092.1  1.1      27 % (Q: 85.3 %/S: 87.0 %)     conserved hypothetical protein {}
5096.1  1.1      44 % (Q: 48.9 %/S: 70.2 %)     conserved hypothetical protein {}
5103.1  1.1      34 % (Q: 93.8 %/S: 92.0 %)     conserved hypothetical protein {}
5104.1  1.1      27 % (Q: 76.4 %/S: 74.3 %)     conserved hypothetical protein {}
5105.1  1.1      55 % (Q: 97.1 %/S: 89.3 %)     conserved hypothetical protein {}
5115.1  1.1      50 % (Q: 94.1 %/S: 96.0 %)     conserved hypothetical protein {}
5116.1  1.1      66 % (Q: 90.8 %/S: 98.5 %)     conserved hypothetical protein {}
5117.1  1.1      33 % (Q: 65.0 %/S:111.2 %)     conserved hypothetical protein {}
5118.1  1.1      40 % (Q: 54.4 %/S: 55.1 %)     conserved hypothetical protein {}
5121.1  1.1      50 % (Q: 95.4 %/S: 95.4 %)     conserved hypothetical protein {}
5122.1  1.1      37 % (Q:100.0 %/S: 96.7 %)     conserved hypothetical protein {}
5123.1  1.1      43 % (Q: 93.6 %/S: 90.7 %)     conserved hypothetical protein {}
5126.1  1.1      40 % (Q: 54.6 %/S: 25.5 %)     conserved hypothetical protein {}
5128.1  1.1      45 % (Q: 63.1 %/S: 60.6 %)     conserved hypothetical protein {}
5131.1  1.1      30 % (Q: 97.5 %/S: 91.2 %)     conserved hypothetical protein {}
5132.1  1.1      51 % (Q: 90.7 %/S: 94.6 %)     conserved hypothetical protein {}
5141.1  1.1      50 % (Q: 79.4 %/S: 65.8 %)     conserved hypothetical protein {}
5153.1  1.1      50 % (Q: 72.4 %/S: 90.7 %)     conserved hypothetical protein {}
5154.1  1.1      33 % (Q: 86.3 %/S: 84.3 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
5168.1  1.1      36 % (Q: 83.3 %/S: 75.0 %)     conserved hypothetical protein {}
5169.1  1.1      22 % (Q: 69.5 %/S: 83.3 %)     conserved hypothetical protein {}
5172.1  1.1      40 % (Q: 84.9 %/S: 94.7 %)     conserved hypothetical protein {}
5181.1  1.1      50 % (Q: 87.1 %/S: 88.8 %)     conserved hypothetical protein {}
5200.1  1.1      60 % (Q: 92.0 %/S: 66.7 %)     conserved hypothetical protein {}
5203.1  1.1      31 % (Q:108.4 %/S:100.5 %)     conserved hypothetical protein {}
5213.1  1.1      38 % (Q: 83.4 %/S: 89.6 %)     conserved hypothetical protein {}
5215.1  1.1      63 % (Q:101.2 %/S:100.0 %)     conserved hypothetical protein {}
5216.1  1.1      35 % (Q: 89.8 %/S: 64.6 %)     conserved hypothetical protein {}
5218.1  1.1      43 % (Q: 97.6 %/S: 95.7 %)     conserved hypothetical protein {}
5220.1  1.1      55 % (Q: 95.7 %/S: 90.5 %)     conserved hypothetical protein {}
5239.1  1.1      28 % (Q: 80.9 %/S: 15.1 %)     conserved hypothetical protein {}
5247.1  1.1      33 % (Q:120.4 %/S:106.6 %)     conserved hypothetical protein {}
5248.1  1.1      50 % (Q: 87.5 %/S: 95.1 %)     conserved hypothetical protein {}
5250.1  1.1      34 % (Q: 90.1 %/S: 82.8 %)     conserved hypothetical protein (xxxX) {Rhizobium leguminosarum}
5259.1  1.1      46 % (Q:102.2 %/S:102.2 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
5270.1  1.1      51 % (Q: 99.4 %/S: 98.8 %)     conserved hypothetical protein {}
5271.1  1.1      46 % (Q: 96.0 %/S: 97.9 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
5274.1  1.1      54 % (Q:101.2 %/S: 97.6 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
5278.1  1.1      45 % (Q: 95.7 %/S: 73.3 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
5280.1  1.1      44 % (Q: 98.3 %/S: 97.0 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
5285.1  1.1      72 % (Q: 84.1 %/S: 61.6 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
5286.1  1.1      41 % (Q: 53.3 %/S: 83.0 %)     conserved hypothetical protein (xxxX) {Streptococcus gordonii}
5296.1  1.1      47 % (Q: 98.9 %/S: 93.6 %)     conserved hypothetical protein {}
5297.1  1.1      48 % (Q:101.2 %/S:103.6 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
5304.1  1.1      51 % (Q: 85.7 %/S: 84.5 %)     conserved hypothetical protein {}
5310.1  1.1      62 % (Q: 67.8 %/S: 64.2 %)     conserved hypothetical protein {}
5314.1  1.1      35 % (Q: 83.7 %/S: 95.3 %)     conserved hypothetical protein {}
5329.1  1.1      30 % (Q:100.0 %/S: 44.5 %)     conserved hypothetical protein {}
5330.1  1.1      34 % (Q: 80.1 %/S: 38.8 %)     conserved hypothetical protein {}
5331.1  1.1      48 % (Q:107.7 %/S: 97.0 %)     conserved hypothetical protein {}
5332.1  1.1      42 % (Q: 98.8 %/S: 92.8 %)     conserved hypothetical protein {}
5335.1  1.1      62 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein {}
5339.1  1.1      36 % (Q: 94.0 %/S: 94.9 %)     conserved hypothetical protein {}
5342.1  1.1      43 % (Q: 84.8 %/S: 98.4 %)     conserved hypothetical protein {}
5343.1  1.1      43 % (Q: 97.6 %/S: 86.5 %)     conserved hypothetical protein {}
5344.1  1.1      40 % (Q:107.1 %/S:103.8 %)     conserved hypothetical protein {}
5345.1  1.1      45 % (Q: 99.4 %/S: 93.4 %)     conserved hypothetical protein {}
5346.1  1.1      36 % (Q: 81.8 %/S: 93.2 %)     conserved hypothetical protein {}
5347.1  1.1      43 % (Q: 95.3 %/S: 92.0 %)     conserved hypothetical protein {}
5362.1  1.1      55 % (Q: 98.2 %/S: 97.3 %)     conserved hypothetical protein {}
5370.1  1.1      57 % (Q: 93.8 %/S: 65.5 %)     conserved hypothetical protein {}
5371.1  1.1      49 % (Q: 87.3 %/S:100.5 %)     conserved hypothetical protein {}
5380.1  1.1      48 % (Q: 38.6 %/S: 44.3 %)     conserved hypothetical protein {}
5381.1  1.1      41 % (Q: 99.2 %/S: 97.8 %)     conserved hypothetical protein {}
5389.1  1.1      61 % (Q: 96.7 %/S: 90.1 %)     conserved hypothetical protein {}
5390.1  1.1      60 % (Q:100.0 %/S:108.1 %)     conserved hypothetical protein {}
5403.1  1.1      27 % (Q: 98.0 %/S:114.9 %)     conserved hypothetical protein {}
5411.1  1.1      26 % (Q:119.5 %/S: 76.9 %)     conserved hypothetical protein {}
5412.1  1.1      69 % (Q: 98.4 %/S: 64.6 %)     conserved hypothetical protein {}
5413.1  1.1      32 % (Q: 90.4 %/S: 95.1 %)     conserved hypothetical protein {}
5415.1  1.1      41 % (Q:100.0 %/S: 97.1 %)     conserved hypothetical protein {}
5418.1  1.1      21 % (Q: 88.2 %/S: 95.1 %)     conserved hypothetical protein {}
5420.1  1.1      38 % (Q: 98.7 %/S: 86.5 %)     conserved hypothetical protein {}
5421.1  1.1      40 % (Q: 97.7 %/S: 97.7 %)     conserved hypothetical protein {}
5424.1  1.1      34 % (Q: 83.7 %/S: 93.6 %)     conserved hypothetical protein {}
5430.1  1.1      67 % (Q: 84.4 %/S: 84.4 %)     conserved hypothetical protein {}
5431.1  1.1      53 % (Q: 88.0 %/S: 93.8 %)     conserved hypothetical protein {}
5435.1  1.1      35 % (Q: 49.8 %/S: 58.0 %)     conserved hypothetical protein {}
5438.1  1.1      51 % (Q: 88.3 %/S: 76.0 %)     conserved hypothetical protein {}
5442.1  1.1      45 % (Q: 95.3 %/S: 65.6 %)     conserved hypothetical protein {}
5447.1  1.1      85 % (Q: 87.1 %/S: 92.5 %)     conserved hypothetical protein {}
5450.1  1.1      23 % (Q: 70.7 %/S: 55.7 %)     conserved hypothetical protein {}
5451.1  1.1      41 % (Q: 81.7 %/S: 75.9 %)     conserved hypothetical protein {}
5456.1  1.1      36 % (Q: 93.0 %/S: 89.0 %)     conserved hypothetical protein {}
5458.1  1.1      64 % (Q: 77.2 %/S: 91.9 %)     conserved hypothetical protein {}
5468.1  1.1      47 % (Q: 83.2 %/S: 77.1 %)     conserved hypothetical protein {}
5471.1  1.1      39 % (Q: 87.9 %/S: 56.0 %)     conserved hypothetical protein (xxxX) {xxx}
5475.1  1.1      54 % (Q:105.8 %/S: 91.9 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
5476.1  1.1      43 % (Q: 93.5 %/S: 96.6 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
5482.1  1.1      51 % (Q:100.0 %/S:101.4 %)     conserved hypothetical protein (xxxX) {bacteriophage phi CTX}
5486.1  1.1      40 % (Q: 52.9 %/S: 66.7 %)     conserved hypothetical protein {}
5491.1  1.1      25 % (Q: 92.2 %/S: 93.1 %)     conserved hypothetical protein (xxxX) {xxx}
5492.1  1.1      52 % (Q: 89.3 %/S: 80.5 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
5498.1  1.1      42 % (Q:100.0 %/S: 86.7 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
5500.1  1.1      41 % (Q: 78.2 %/S: 85.2 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
5504.1  1.1      38 % (Q: 97.6 %/S:100.8 %)     conserved hypothetical protein {}
5505.1  1.1      41 % (Q: 36.5 %/S: 69.7 %)     conserved hypothetical protein {}
5506.1  1.1      61 % (Q: 95.1 %/S: 92.8 %)     conserved hypothetical protein {}
5507.1  1.1      64 % (Q: 98.9 %/S: 98.9 %)     conserved hypothetical protein {}
5516.1  1.1      53 % (Q:100.5 %/S:100.5 %)     conserved hypothetical protein {}
5519.1  1.1      45 % (Q: 50.5 %/S:  9.7 %)     conserved hypothetical protein {}
5527.1  1.1      25 % (Q:107.7 %/S: 43.0 %)     conserved hypothetical protein {}
5531.1  1.1      53 % (Q: 71.6 %/S: 94.0 %)     conserved hypothetical protein {}
5532.1  1.1      52 % (Q: 89.5 %/S: 65.2 %)     conserved hypothetical protein {}
5536.1  1.1      53 % (Q: 84.1 %/S: 90.7 %)     conserved hypothetical protein {}
5541.1  1.1      51 % (Q: 98.7 %/S: 98.7 %)     conserved hypothetical protein {}
5542.1  1.1      36 % (Q: 81.5 %/S: 68.6 %)     conserved hypothetical protein {}
5556.1  1.1      45 % (Q: 82.0 %/S:101.2 %)     conserved hypothetical protein {}
5559.1  1.1      43 % (Q: 98.2 %/S: 75.0 %)     conserved hypothetical protein {}
5560.1  1.1      41 % (Q: 79.7 %/S: 89.2 %)     conserved hypothetical protein {}
5561.1  1.1      39 % (Q: 79.1 %/S: 95.4 %)     conserved hypothetical protein {}
5563.1  1.1      67 % (Q:100.0 %/S: 99.0 %)     conserved hypothetical protein {}
5564.1  1.1      37 % (Q: 76.0 %/S: 78.6 %)     conserved hypothetical protein {}
5565.1  1.1      27 % (Q: 68.0 %/S:  5.2 %)     conserved hypothetical protein {}
5566.1  1.1      43 % (Q: 98.1 %/S: 92.4 %)     conserved hypothetical protein {}
5567.1  1.1      53 % (Q: 74.6 %/S: 78.3 %)     conserved hypothetical protein {}
5568.1  1.1      57 % (Q: 87.7 %/S: 63.3 %)     conserved hypothetical protein {}
5576.1  1.1      35 % (Q: 97.8 %/S: 94.2 %)     conserved hypothetical protein {}
5577.1  1.1      41 % (Q:100.0 %/S: 99.4 %)     conserved hypothetical protein {}
5579.1  1.1      58 % (Q: 91.7 %/S: 96.5 %)     conserved hypothetical protein {}
5580.1  1.1      48 % (Q: 99.3 %/S: 68.2 %)     conserved hypothetical protein {}
5581.1  1.1      64 % (Q: 98.5 %/S: 87.0 %)     conserved hypothetical protein {}
5585.1  1.1      62 % (Q: 82.9 %/S: 63.0 %)     conserved hypothetical protein {}
5587.1  1.1      46 % (Q: 96.3 %/S:103.4 %)     conserved hypothetical protein {}
6004.1  2.1      33 % (Q: 57.1 %/S: 59.3 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
6005.1  2.1      29 % (Q: 53.3 %/S: 71.5 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
6007.1  2.1      40 % (Q: 99.3 %/S: 95.7 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
6008.1  2.1      43 % (Q: 92.0 %/S: 89.9 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
6009.1  2.1      28 % (Q: 77.6 %/S: 48.1 %)     conserved hypothetical protein {}
6011.1  2.1      27 % (Q: 91.7 %/S: 16.6 %)     conserved hypothetical protein {}
6018.1  2.1      57 % (Q:103.4 %/S:100.5 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
6019.1  2.1      48 % (Q: 97.8 %/S: 88.2 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
6021.1  2.1      38 % (Q: 95.2 %/S: 76.4 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
6038.1  2.1      60 % (Q: 99.1 %/S: 72.6 %)     conserved hypothetical protein {}
6060.1  2.1      41 % (Q: 91.8 %/S: 89.3 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
6076.1  2.1      44 % (Q:102.1 %/S:100.0 %)     conserved hypothetical protein (xxxX) {xxx}
6078.1  2.1      33 % (Q: 96.2 %/S: 75.2 %)     conserved hypothetical protein (xxxX) {xxx}
6083.1  2.1      48 % (Q: 56.9 %/S:  3.5 %)     conserved hypothetical protein (xxxX) {Aspergillus nidulans}
6085.1  2.1      89 % (Q: 97.5 %/S: 52.7 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
6089.1  2.1      41 % (Q: 57.1 %/S: 27.3 %)     conserved hypothetical protein {}
6093.1  2.1      26 % (Q: 56.6 %/S: 65.5 %)     conserved hypothetical protein (xxxX) {Vibrio cholerae}
6100.1  2.1      46 % (Q: 98.7 %/S:102.5 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
6102.1  2.1      43 % (Q: 79.4 %/S: 80.1 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
6104.1  2.1      36 % (Q:101.6 %/S: 96.2 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
6106.1  2.1      46 % (Q: 95.9 %/S: 95.6 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
6108.1  2.1      63 % (Q: 82.5 %/S: 47.0 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
6115.1  2.1      42 % (Q: 73.7 %/S: 18.7 %)     conserved hypothetical protein {}
6116.1  2.1      36 % (Q: 85.8 %/S: 86.1 %)     conserved hypothetical protein {}
6127.1  2.1      69 % (Q: 88.7 %/S: 84.6 %)     conserved hypothetical protein {}
6138.1  2.1      58 % (Q: 92.6 %/S:101.9 %)     conserved hypothetical protein {}
6139.1  2.1      48 % (Q: 93.1 %/S: 91.5 %)     conserved hypothetical protein {}
6141.1  2.1      70 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein {}
6144.1  2.1      27 % (Q: 87.6 %/S: 14.1 %)     conserved hypothetical protein {}
6146.1  2.1      32 % (Q: 86.5 %/S: 71.9 %)     conserved hypothetical protein {}
6186.1  2.1      40 % (Q: 96.2 %/S: 94.8 %)     conserved hypothetical protein {}
6188.1  2.1      43 % (Q: 80.6 %/S: 81.5 %)     conserved hypothetical protein {}
6189.1  2.1      26 % (Q: 74.3 %/S: 66.3 %)     conserved hypothetical protein {}
6195.1  2.1      31 % (Q: 86.9 %/S: 85.0 %)     conserved hypothetical protein {}
6206.1  2.1      30 % (Q: 86.8 %/S: 79.7 %)     conserved hypothetical protein {}
6214.1  2.1      60 % (Q: 60.3 %/S: 60.3 %)     conserved hypothetical protein {}
6216.1  2.1      27 % (Q: 62.8 %/S: 86.1 %)     conserved hypothetical protein {}
6225.1  2.1      78 % (Q: 89.8 %/S: 26.6 %)     conserved hypothetical protein {}
6230.1  2.1      81 % (Q: 98.1 %/S: 94.4 %)     conserved hypothetical protein {}
6241.1  2.1      69 % (Q:100.3 %/S: 99.7 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
6243.1  2.1      57 % (Q: 94.9 %/S: 95.5 %)     conserved hypothetical protein {}
6244.1  2.1      55 % (Q: 94.6 %/S: 91.0 %)     conserved hypothetical protein {}
6247.1  2.1      53 % (Q: 98.2 %/S:100.0 %)     conserved hypothetical protein (xxxX) {Pseudomonas aeruginosa}
6248.1  2.1      50 % (Q: 79.2 %/S: 81.8 %)     conserved hypothetical protein (xxxX) {Thermotoga maritima}
6255.1  2.1      61 % (Q: 96.3 %/S: 93.9 %)     conserved hypothetical protein {}
6256.1  2.1      39 % (Q: 98.6 %/S: 90.1 %)     conserved hypothetical protein {}
6259.1  2.1      56 % (Q: 93.0 %/S: 98.1 %)     conserved hypothetical protein {}
6263.1  2.1      36 % (Q: 96.4 %/S: 93.0 %)     conserved hypothetical protein {}
6265.1  2.1      43 % (Q: 94.9 %/S: 90.0 %)     conserved hypothetical protein {}
6271.1  2.1      38 % (Q: 81.0 %/S: 81.0 %)     conserved hypothetical protein {}
6272.1  2.1      46 % (Q: 99.2 %/S: 86.3 %)     conserved hypothetical protein {}
6280.1  2.1      29 % (Q: 23.4 %/S: 64.5 %)     conserved hypothetical protein {}
6286.1  2.1      43 % (Q: 95.2 %/S: 92.5 %)     conserved hypothetical protein {}
6296.1  2.1      28 % (Q: 95.9 %/S: 92.1 %)     conserved hypothetical protein {}
6298.1  2.1      32 % (Q: 93.9 %/S:111.5 %)     conserved hypothetical protein {}
6306.1  2.1      26 % (Q: 88.3 %/S: 85.0 %)     conserved hypothetical protein {}
6308.1  2.1      64 % (Q: 98.7 %/S: 92.5 %)     conserved hypothetical protein (xxxX) {Pyrococcus horikoshii}
6309.1  2.1      37 % (Q: 28.6 %/S: 95.5 %)     conserved hypothetical protein {}
6312.1  2.1      59 % (Q: 62.7 %/S: 20.0 %)     conserved hypothetical protein {}
6314.1  2.1      55 % (Q: 97.2 %/S: 95.9 %)     conserved hypothetical protein {}
6315.1  2.1      72 % (Q:100.0 %/S: 95.2 %)     conserved hypothetical protein {}
6319.1  2.1      28 % (Q: 61.3 %/S: 84.5 %)     conserved hypothetical protein {}
6320.1  2.1      29 % (Q: 94.2 %/S: 87.2 %)     conserved hypothetical protein {}
6322.1  2.1      36 % (Q: 45.1 %/S:  2.3 %)     conserved hypothetical protein {}
6325.1  2.1      72 % (Q: 96.6 %/S: 95.3 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
7004.1  3.1      57 % (Q: 85.1 %/S: 98.3 %)     conserved hypothetical protein {}
7005.1  3.1      24 % (Q: 70.8 %/S: 43.0 %)     conserved hypothetical protein {}
7020.1  3.1      69 % (Q: 87.2 %/S: 59.1 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
7022.1  3.1      39 % (Q: 81.8 %/S: 86.2 %)     conserved hypothetical protein (xxxX) {Mesorhizobium loti}
7025.1  3.1      38 % (Q: 85.4 %/S: 72.1 %)     conserved hypothetical protein (xxxX) {xxx}
7043.1  3.1      28 % (Q: 93.0 %/S: 26.9 %)     conserved hypothetical protein {}
7049.1  3.1      47 % (Q: 83.3 %/S: 26.2 %)     conserved hypothetical protein {}
7050.1  3.1      67 % (Q: 98.8 %/S: 82.7 %)     conserved hypothetical protein {}
7051.1  3.1      25 % (Q: 65.1 %/S: 99.5 %)     conserved hypothetical protein {}
7057.1  3.1      27 % (Q: 82.5 %/S:103.0 %)     conserved hypothetical protein {}
7060.1  3.1      42 % (Q: 85.9 %/S: 90.4 %)     conserved hypothetical protein {}
7062.1  3.1      44 % (Q: 74.7 %/S: 59.1 %)     conserved hypothetical protein {}
7068.1  3.1      65 % (Q: 97.6 %/S: 81.6 %)     conserved hypothetical protein {}
7078.1  3.1      61 % (Q: 92.5 %/S: 91.0 %)     conserved hypothetical protein {}
7082.1  3.1      38 % (Q: 98.2 %/S: 98.2 %)     conserved hypothetical protein {}
7087.1  3.1      49 % (Q: 98.1 %/S: 94.4 %)     conserved hypothetical protein {}
7098.1  3.1      26 % (Q: 69.2 %/S: 79.8 %)     conserved hypothetical protein {}
7099.1  3.1      36 % (Q:100.0 %/S: 85.8 %)     conserved hypothetical protein {}
7102.1  3.1      69 % (Q: 99.5 %/S:100.0 %)     conserved hypothetical protein {}
7115.1  3.1      40 % (Q: 56.1 %/S:  1.3 %)     conserved hypothetical protein {}
8003.1  4.1      62 % (Q: 89.0 %/S: 90.7 %)     conserved hypothetical protein {}
8005.1  4.1      37 % (Q: 95.9 %/S: 81.1 %)     conserved hypothetical protein {}
8015.1  4.1      66 % (Q:101.7 %/S: 29.6 %)     conserved hypothetical protein {}
10002.1 1.1      25 % (Q: 81.2 %/S:106.0 %)     conserved hypothetical protein {}
10019.1 1.1      47 % (Q: 73.9 %/S: 89.5 %)     conserved hypothetical protein {}
10042.1 1.1      29 % (Q: 87.0 %/S: 85.2 %)     conserved hypothetical protein {}
10043.1 1.1      35 % (Q: 81.7 %/S: 61.3 %)     conserved hypothetical protein {}
10101.1 1.1      50 % (Q: 40.0 %/S: 93.8 %)     conserved hypothetical protein {}
10102.1 1.1      75 % (Q: 70.7 %/S: 98.8 %)     conserved hypothetical protein {}
10118.1 1.1      26 % (Q: 87.6 %/S: 44.8 %)     conserved hypothetical protein {}
11014.1 2.1      24 % (Q: 91.8 %/S: 81.9 %)     conserved hypothetical protein {}
12005.1 3.1      62 % (Q: 60.9 %/S: 18.7 %)     conserved hypothetical protein {}
12011.1 3.1      31 % (Q: 93.5 %/S: 92.9 %)     conserved hypothetical protein {}
12015.1 3.1      43 % (Q: 80.2 %/S: 43.5 %)     conserved hypothetical protein {}
15004.1 1.1      30 % (Q: 97.7 %/S:100.0 %)     conserved hypothetical protein {}
15006.1 1.1      62 % (Q: 79.8 %/S: 93.6 %)     conserved hypothetical protein {}
15008.1 1.1       0 % (Q:  0.0 %/S:  0.0 %)     conserved hypothetical protein (xxxX) {Sinorhizobium meliloti}
3565.1  1.1      74 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein, membrane protein (xxxX) {Bacillus subtilis}
2094.1  2.1      57 % (Q: 98.0 %/S:100.4 %)     conserved hypothetical protien (xxxX) {Bacillus halodurans}

16.3. HYPOTHETICAL/NON-CONSERVED HYPOTHETICAL (704 genes)

3659.1  2.1      20 % (Q: 74.0 %/S: 28.7 %)     hypothetical proetin (xxxX) {Mus musculus}
2.1     2.1      32 % (Q: 51.9 %/S: 20.4 %)     hypothetical protein {}
25.1    1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
59.1    1.1      24 % (Q: 95.3 %/S: 91.4 %)     hypothetical protein (xxxX) {Mycobacterium tuberculosis}
77.1    4.1      64 % (Q: 87.8 %/S: 42.2 %)     hypothetical protein (xxxX) {Rhizobium rhizogenes pRi1724}
103.1   2.1      26 % (Q: 91.0 %/S:  5.5 %)     hypothetical protein (xxxX) {Homo sapiens}
116.1   4.1     100 % (Q:100.0 %/S:100.0 %)     hypothetical protein (xxxX) {Agrobacterium tumefaciens plasmid pTiC58}
215.1   4.1     100 % (Q:100.0 %/S:100.0 %)     hypothetical protein (ORF13) {Agrobacterium tumefaciens}
244.1   1.1      28 % (Q: 67.3 %/S: 24.0 %)     hypothetical protein (xxxX) {Pseudomonas aeruginosa}
375.1   1.1      27 % (Q: 88.2 %/S:  4.4 %)     hypothetical protein (xxxX) {xxx}
435.1   3.1      31 % (Q: 32.6 %/S:  8.4 %)     hypothetical protein (xxxX) {xxx}
464.1   1.1      24 % (Q: 90.5 %/S: 29.0 %)     hypothetical protein (xxxX) {xxx}
465.1   1.1      30 % (Q: 96.2 %/S: 53.6 %)     hypothetical protein (xxxX) {xxx}
467.1   1.1      24 % (Q: 61.4 %/S: 57.5 %)     hypothetical protein (xxxX) {xxx}
468.1   1.1      34 % (Q: 53.7 %/S: 80.0 %)     hypothetical protein (xxxX) {xxx}
469.1   1.1      22 % (Q: 51.5 %/S:  3.2 %)     hypothetical protein (xxxX) {xxx}
472.1   1.1      41 % (Q: 46.5 %/S: 44.7 %)     hypothetical protein (xxxX) {xxx}
483.1   1.1      30 % (Q: 31.6 %/S: 57.2 %)     hypothetical protein (xxxX) {xxx}
502.1   1.1      29 % (Q: 51.3 %/S: 20.2 %)     hypothetical protein (xxxX) {xxx}
504.1   1.1      34 % (Q: 52.3 %/S: 19.0 %)     hypothetical protein (xxxX) {xxx}
522.1   2.1      28 % (Q: 61.7 %/S: 81.2 %)     hypothetical protein (xxxX) {xxx}
540.1   1.1      27 % (Q: 65.7 %/S: 27.3 %)     hypothetical protein (xxxX) {xxx}
559.1   1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
585.1   4.1      28 % (Q: 23.0 %/S: 12.0 %)     hypothetical protein {}
602.1   1.1      28 % (Q: 41.1 %/S:  7.0 %)     hypothetical protein (xxxX) {xxx}
609.1   1.1      27 % (Q: 52.3 %/S: 60.2 %)     hypothetical protein (xxxX) {xxx}
630.1   1.1      56 % (Q: 18.1 %/S:  3.0 %)     hypothetical protein (xxxX) {xxx}
644.1   3.1      39 % (Q: 40.2 %/S: 10.3 %)     hypothetical protein (xxxX) {xxx}
645.1   3.1      77 % (Q: 44.2 %/S: 52.3 %)     hypothetical protein (xxxX) {Agrobacterium tumefaciens}
649.1   3.1      28 % (Q: 81.0 %/S: 23.1 %)     hypothetical protein (xxxX) {xxx}
658.1   3.1      66 % (Q: 49.0 %/S: 54.8 %)     hypothetical protein (xxxX) {Agrobacterium tumefaciens}
701.1   1.1      30 % (Q: 51.6 %/S: 12.8 %)     hypothetical protein (xxxX) {xxx}
710.1   1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
741.1   1.1      28 % (Q: 80.5 %/S: 31.2 %)     hypothetical protein (xxxX) {xxx}
742.1   1.1      24 % (Q: 82.2 %/S:  7.2 %)     hypothetical protein (xxxX) {xxx}
770.1   1.1      33 % (Q: 45.5 %/S: 44.6 %)     hypothetical protein (xxxX) {xxx}
771.1   1.1      28 % (Q: 59.8 %/S: 17.4 %)     hypothetical protein (xxxX) {xxx}
772.1   1.1      30 % (Q: 76.6 %/S: 27.4 %)     hypothetical protein (xxxX) {xxx}
774.1   1.1      31 % (Q: 73.3 %/S: 10.3 %)     hypothetical protein (xxxX) {xxx}
778.1   1.1      29 % (Q: 49.5 %/S: 56.2 %)     hypothetical protein (xxxX) {Ostertagia ostertagi}
779.1   1.1      24 % (Q: 51.0 %/S: 53.4 %)     hypothetical protein (xxxX) {xxx}
782.1   1.1      51 % (Q: 10.3 %/S: 27.9 %)     hypothetical protein (xxxX) {xxx}
783.1   1.1      29 % (Q: 44.3 %/S: 18.1 %)     hypothetical protein (xxxX) {xxx}
784.1   1.1      23 % (Q: 58.5 %/S: 31.0 %)     hypothetical protein (xxxX) {xxx}
785.1   1.1      25 % (Q: 19.8 %/S: 25.5 %)     hypothetical protein (xxxX) {xxx}
786.1   1.1      29 % (Q: 64.2 %/S: 41.8 %)     hypothetical protein (xxxX) {xxx}
788.1   1.1      35 % (Q: 35.8 %/S:  9.2 %)     hypothetical protein (xxxX) {xxx}
800.1   1.1      50 % (Q: 11.6 %/S:  1.3 %)     hypothetical protein (xxxX) {xxx}
924.1   2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
933.1   1.1      33 % (Q: 40.0 %/S: 19.6 %)     hypothetical protein (xxxX) {xxx}
940.1   1.1      31 % (Q: 74.6 %/S:  8.5 %)     Hypothetical Protein (xxxX) {xxx}
977.1   2.1      30 % (Q: 79.9 %/S: 13.8 %)     Hypothetical Protein (xxxX) {xxx}
1019.1  1.1      33 % (Q: 68.3 %/S: 18.3 %)     Hypothetical Protein (xxxX) {xxx}
1030.1  1.1      33 % (Q: 80.3 %/S: 43.8 %)     Hypothetical protein (xxxX) {xxx}
1031.1  1.1      34 % (Q: 87.0 %/S:  3.8 %)     Hypothetical Protein (xxxX) {xxx}
1044.1  1.1      29 % (Q: 39.0 %/S: 43.1 %)     hypothetical protein (xxxX) {Vibrio cholerae}
1089.1  1.1      26 % (Q: 99.1 %/S: 22.5 %)     Hypothetical Protein (xxxX) {xxx}
1504.1  1.1      30 % (Q: 50.8 %/S: 17.5 %)     hypothetical protein (xxxX) {xxx}
1570.1  3.1      32 % (Q: 41.9 %/S: 43.8 %)     hypothetical protein (xxxX) {xxx}
1579.1  3.1      29 % (Q: 39.8 %/S: 86.0 %)     hypothetical protein (xxxX) {xxx}
1617.1  1.1      43 % (Q: 37.3 %/S:  1.7 %)     hypothetical protein (xxxX) {Xanthomonas campestris}
1731.1  1.1      29 % (Q: 31.4 %/S: 24.4 %)     hypothetical protein (xxxX) {xxx}
1746.1  1.1      25 % (Q: 68.4 %/S: 64.4 %)     hypothetical protein (xxxX) {xxx}
1762.1  1.1      26 % (Q: 85.7 %/S: 13.8 %)     hypothetical protein (xxxX) {xxx}
1876.1  1.1      28 % (Q: 40.9 %/S: 24.8 %)     hypothetical protein (xxxX) {xxx}
1886.1  1.1      41 % (Q: 18.5 %/S:  8.6 %)     hypothetical protein (xxxX) {xxx}
1889.1  1.1      34 % (Q: 32.9 %/S: 23.0 %)     hypothetical protein (xxxX) {xxx}
1904.1  1.1      34 % (Q: 40.3 %/S:  7.7 %)     hypothetical protein (xxxX) {xxxX}
1905.1  1.1      35 % (Q:114.0 %/S: 80.7 %)     hypothetical protein (xxxX) {xxx}
2069.1  2.1      26 % (Q: 33.3 %/S: 13.6 %)     hypothetical protein (xxxX) {Rickettsia typhi}
2072.1  2.1      29 % (Q: 56.7 %/S:  6.8 %)     hypothetical protein (xxxX) {xxx}
2111.1  2.1      29 % (Q: 47.8 %/S: 23.6 %)     hypothetical protein (xxxX) {xxx}
2140.1  1.1      33 % (Q: 36.3 %/S:  2.6 %)     hypothetical protein (xxxX) {xxx}
2159.1  1.1      42 % (Q: 39.1 %/S: 94.1 %)     hypothetical protein (xxxX) {xxx}
2166.1  1.1      28 % (Q: 51.1 %/S:  6.8 %)     hypothetical protein (xxxX) {Drosophila melanogaster}
2183.1  1.1      31 % (Q: 96.4 %/S: 12.3 %)     hypothetical protein (xxxX) {Rattus norvegicus}
2264.1  1.1      22 % (Q: 94.2 %/S: 27.0 %)     hypothetical protein (xxxX) {Drosophila melanogaster}
2266.1  1.1      38 % (Q: 22.8 %/S:  3.1 %)     hypothetical protein (xxxX) {xxx}
2275.1  1.1      31 % (Q: 86.3 %/S: 15.0 %)     hypothetical protein (xxxX) {xxx}
2321.1  3.1      26 % (Q: 64.7 %/S: 68.8 %)     hypothetical protein (xxxX) {xxx}
2420.1  2.1      38 % (Q: 25.4 %/S:  3.6 %)     hypothetical protein (xxxX) {Mycoplasma pulmonis}
2426.1  2.1      27 % (Q: 83.1 %/S: 59.9 %)     hypothetical protein (xxxX) {xxx}
2530.1  2.1      31 % (Q: 17.7 %/S: 48.2 %)     hypothetical protein (xxxX) {xxx}
2540.1  2.1      31 % (Q: 46.5 %/S:  9.0 %)     hypothetical protein (xxxX) {xxx}
2544.1  2.1      30 % (Q: 47.9 %/S: 12.5 %)     hypothetical protein (xxxX) {xxx}
2546.1  2.1      27 % (Q: 72.5 %/S: 16.8 %)     hypothetical protein (xxxX) {xxxx}
2561.1  2.1      39 % (Q: 39.0 %/S:  8.7 %)     hypothetical protein (xxxX) {xxx}
2577.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
2587.1  1.1      36 % (Q: 34.3 %/S:  6.8 %)     hypothetical protein (xxxX) {xxx}
2591.1  1.1      25 % (Q: 53.8 %/S: 36.2 %)     hypothetical protein (xxxX) {xxx}
2614.1  1.1      33 % (Q: 64.4 %/S: 11.0 %)     hypothetical protein (xxxX) {xxx}
2615.1  1.1      34 % (Q: 63.3 %/S:  4.6 %)     hypothetical protein (xxxX) {xxx}
2619.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {E. coli}
2642.1  2.1      28 % (Q: 33.3 %/S: 21.4 %)     hypothetical protein (xxxX) {xxx}
2656.1  2.1      30 % (Q: 36.8 %/S: 24.9 %)     hypothetical protein (xxxX) {xxx}
2672.1  2.1      31 % (Q: 10.8 %/S: 14.8 %)     hypothetical protein (xxxX) {xxx}
2709.1  2.1      28 % (Q: 13.2 %/S: 24.4 %)     hypothetical protein (xxxX) {Vibrio cholerae}
2717.1  1.1      27 % (Q: 18.3 %/S:  8.0 %)     hypothetical protein (xxxX) {xxx}
2727.1  1.1      26 % (Q: 67.4 %/S: 55.6 %)     hypothetical protein (xxxX) {xxx}
2737.1  1.1      26 % (Q: 42.3 %/S: 14.9 %)     hypothetical protein (xxxX) {xxx}
2738.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
2741.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
2742.1  1.1      38 % (Q: 37.9 %/S: 34.4 %)     hypothetical protein (xxxX) {xxx}
2801.1  1.1      40 % (Q: 31.4 %/S: 31.9 %)     hypothetical protein (xxxX) {xxx}
2811.1  1.1      28 % (Q: 50.7 %/S: 18.4 %)     hypothetical protein (xxxX) {xxx}
2816.1  1.1      50 % (Q: 20.0 %/S: 10.1 %)     hypothetical protein (xxxX) {xxx}
2818.1  1.1      33 % (Q: 65.3 %/S: 53.2 %)     hypothetical protein (xxxX) {xxx}
2900.1  3.1      63 % (Q: 24.7 %/S: 18.8 %)     hypothetical protein (xxxX) {Streptomyces coelicolor A3(2)}
3003.1  1.1      29 % (Q: 59.0 %/S: 28.6 %)     hypothetical protein (xxxX) {xxx}
3059.1  2.1      33 % (Q: 35.2 %/S:  8.3 %)     hypothetical protein (xxxX) {Thermotoga maritima}
3181.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
3220.1  1.1      35 % (Q: 37.2 %/S:  3.4 %)     hypothetical protein (xxxX) {xxx}
3225.1  1.1      35 % (Q: 28.2 %/S:  7.7 %)     hypothetical protein {}
3356.1  2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
3393.1  2.1      26 % (Q: 57.1 %/S: 47.7 %)     hypothetical protein (xxxX) {xxx}
3482.1  1.1      33 % (Q: 43.0 %/S: 10.9 %)     hypothetical protein (xxxX) {xxx}
3498.1  1.1      30 % (Q: 50.3 %/S:  4.7 %)     hypothetical protein (xxxX) {xxx}
3503.1  1.1      32 % (Q: 92.0 %/S: 10.1 %)     hypothetical protein (xxxX) {xxx}
3506.1  1.1      27 % (Q: 56.4 %/S: 25.2 %)     hypothetical protein (xxxX) {xxx}
3556.1  1.1      29 % (Q: 46.6 %/S: 72.8 %)     hypothetical protein (xxxX) {xxx}
3584.1  1.1      28 % (Q: 80.7 %/S: 18.3 %)     hypothetical protein (xxxX) {xxx}
3642.1  2.1      41 % (Q: 24.2 %/S:  3.2 %)     hypothetical protein (xxxX) {xxx}
3644.1  2.1      31 % (Q: 24.2 %/S: 17.0 %)     hypothetical protein (xxxX) {Xenopus laevis}
3651.1  2.1      21 % (Q: 68.7 %/S: 24.7 %)     hypothetical protein (xxxX) {xxx}
3652.1  2.1      24 % (Q: 36.8 %/S: 13.9 %)     hypothetical protein (xxxX) {xxx}
3653.1  2.1      22 % (Q: 54.8 %/S: 42.8 %)     hypothetical protein (xxxX) {xxx}
3654.1  2.1      28 % (Q: 38.5 %/S: 17.6 %)     hypothetical protein (xxxX) {xxx}
3656.1  2.1      34 % (Q: 46.1 %/S: 19.4 %)     hypothetical protein (xxxX) {xxx}
3657.1  2.1      31 % (Q: 51.9 %/S:  5.9 %)     hypothetical protein (xxxX) {xxx}
3658.1  2.1      27 % (Q: 56.6 %/S: 10.8 %)     hypothetical protein (xxxX) {xxx}
3660.1  2.1      23 % (Q: 52.9 %/S: 20.8 %)     hypothetical protein (xxxX) {xxx}
3661.1  2.1      26 % (Q: 82.7 %/S: 33.3 %)     hypothetical protein (xxxX) {xxx}
3662.1  2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
3664.1  2.1      30 % (Q: 70.5 %/S: 10.3 %)     hypothetical protein (xxxX) {xxx}
3666.1  2.1      30 % (Q: 60.6 %/S: 14.2 %)     hypothetical protein (xxxX) {xxx}
3673.1  2.1      23 % (Q: 52.6 %/S: 21.0 %)     hypothetical protein {}
3677.1  2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
3745.1  2.1      22 % (Q:108.5 %/S: 98.7 %)     hypothetical protein (xxxX) {xxx}
3755.1  2.1      48 % (Q: 13.2 %/S: 15.3 %)     hypothetical protein (xxxX) {xxx}
3829.1  1.1      50 % (Q: 39.4 %/S:  4.2 %)     hypothetical protein (xxxX) {Caenorhabditis elegans}
3839.1  3.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
3843.1  3.1      97 % (Q:100.0 %/S: 26.9 %)     hypothetical protein (atsA) {Agrobacterium tumefaciens C58}
3879.1  3.1      58 % (Q: 90.7 %/S: 99.6 %)     hypothetical protein (xxxX) {Methanococcus jannaschii}
3940.1  3.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {Homo sapiens}
3942.1  3.1      29 % (Q: 63.0 %/S: 18.8 %)     hypothetical protein (xxxX) {xxx}
3948.1  3.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
3949.1  3.1      24 % (Q: 43.1 %/S: 77.9 %)     hypothetical protein (xxxX) {xxx}
3950.1  3.1      32 % (Q: 22.2 %/S: 10.3 %)     hypothetical protein (xxxX) {xxx}
3951.1  3.1      25 % (Q: 47.8 %/S: 25.6 %)     hypothetical protein (xxxX) {Bacillus subtilis}
3953.1  3.1      31 % (Q: 26.2 %/S: 12.1 %)     hypothetical protein (xxxX) {xxx}
3965.1  3.1      24 % (Q: 35.8 %/S: 30.1 %)     hypothetical protein (xxxX) {xxx}
4047.1  2.1      31 % (Q: 19.9 %/S: 23.4 %)     hypothetical protein (xxxX) {xxx}
4057.1  2.1      25 % (Q: 21.9 %/S: 38.1 %)     hypothetical protein {}
4059.1  2.1      26 % (Q: 62.0 %/S:  8.5 %)     hypothetical protein (xxxX) {xxx}
4062.1  2.1      27 % (Q: 69.3 %/S: 13.4 %)     hypothetical protein (xxxX) {Saccharomyces cerevisiae}
4070.1  2.1      40 % (Q: 51.5 %/S: 35.6 %)     hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4081.1  2.1      52 % (Q: 16.4 %/S:  1.6 %)     hypothetical protein (xxxX) {xxx}
4170.1  2.1      32 % (Q: 49.0 %/S: 27.9 %)     hypothetical protein (xxxX) {Bradyrhizobium japonicum}
4173.1  2.1      25 % (Q: 94.5 %/S: 40.0 %)     hypothetical protein (xxxX) {Gallus gallus}
4174.1  2.1      28 % (Q: 35.4 %/S: 11.0 %)     hypothetical protein (xxxX) {xxx}
4198.1  2.1      29 % (Q: 83.0 %/S: 47.7 %)     hypothetical protein (xxxX) {xxx}
4255.1  1.1      35 % (Q: 61.4 %/S: 40.8 %)     hypothetical protein (xxxX) {Saccharomyces cerevisiae}
4258.1  1.1      32 % (Q: 27.4 %/S:  5.7 %)     hypothetical protein (xxxX) {xxx}
4281.1  1.1      27 % (Q: 21.2 %/S: 11.2 %)     hypothetical protein (xxxX) {xxx}
4345.1  1.1      28 % (Q: 63.6 %/S: 24.8 %)     hypothetical protein (xxxX) {Propionibacterium thoenii}
4369.1  2.1      28 % (Q: 33.8 %/S: 19.8 %)     hypothetical protein (xxxX) {xxx}
4372.1  2.1      25 % (Q: 76.1 %/S: 92.5 %)     hypothetical protein (xxxX) {xxx}
4379.1  2.1      50 % (Q: 16.4 %/S:  2.8 %)     hypothetical protein (xxxX) {xxx}
4385.1  2.1      26 % (Q: 19.3 %/S: 12.7 %)     hypothetical protein (xxxX) {xxx}
4528.1  2.1      30 % (Q: 27.3 %/S: 28.5 %)     hypothetical protein (xxxX) {xxx}
4623.1  2.1      36 % (Q: 25.8 %/S: 21.6 %)     hypothetical protein (xxxX) {xxx}
4624.1  2.1      96 % (Q:  4.0 %/S: 16.5 %)     hypothetical protein (xxxX) {Agrobacterium tumefaciens T37}
4628.1  2.1      25 % (Q: 56.5 %/S: 21.0 %)     hypothetical protein (xxxX) {Mesorhizobium loti}
4634.1  2.1      38 % (Q: 95.7 %/S: 40.7 %)     hypothetical protein (xxxX) {Pseudomonas aeruginosa}
4664.1  2.1      58 % (Q: 70.6 %/S: 20.1 %)     hypothetical protein (xxxX) {Plasmid F}
4715.1  2.1      30 % (Q: 85.6 %/S: 30.5 %)     hypothetical protein (xxxX) {xxx}
5006.1  1.1      30 % (Q: 81.3 %/S:  5.4 %)     hypothetical protein {}
5010.1  1.1      38 % (Q: 56.3 %/S:  6.2 %)     hypothetical protein {}
5011.1  1.1      34 % (Q: 48.4 %/S: 25.2 %)     hypothetical protein {}
5015.1  1.1      31 % (Q: 72.0 %/S: 19.3 %)     hypothetical protein {}
5022.1  1.1      33 % (Q: 39.4 %/S:  5.0 %)     hypothetical protein (xxxX) {xxx}
5023.1  1.1      33 % (Q: 50.6 %/S:  5.9 %)     hypothetical protein (xxxX) {xxx}
5026.1  1.1      29 % (Q: 75.0 %/S: 35.8 %)     hypothetical protein {}
5033.1  1.1      31 % (Q: 50.0 %/S:  4.4 %)     hypothetical protein {}
5035.1  1.1      24 % (Q: 38.2 %/S: 36.4 %)     hypothetical protein {}
5036.1  1.1      31 % (Q: 79.0 %/S: 23.2 %)     hypothetical protein {}
5038.1  1.1      26 % (Q: 54.5 %/S: 13.0 %)     hypothetical protein {}
5039.1  1.1      43 % (Q: 68.3 %/S:  4.2 %)     hypothetical protein {}
5044.1  1.1      24 % (Q: 53.0 %/S: 42.2 %)     hypothetical protein {}
5048.1  1.1      27 % (Q: 51.5 %/S: 20.5 %)     hypothetical protein {}
5057.1  1.1      22 % (Q: 40.7 %/S: 15.0 %)     hypothetical protein {}
5061.1  1.1      29 % (Q: 65.7 %/S:  9.3 %)     hypothetical protein {}
5064.1  1.1      50 % (Q: 36.6 %/S: 11.2 %)     hypothetical protein {}
5065.1  1.1      27 % (Q: 37.8 %/S: 22.6 %)     hypothetical protein {}
5068.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5070.1  1.1      38 % (Q: 60.2 %/S: 17.1 %)     hypothetical protein {}
5071.1  1.1      43 % (Q: 60.7 %/S: 17.2 %)     hypothetical protein {}
5073.1  1.1      68 % (Q: 35.5 %/S:  4.8 %)     hypothetical protein {}
5076.1  1.1      35 % (Q: 79.8 %/S: 71.5 %)     hypothetical protein {}
5087.1  1.1      23 % (Q: 56.3 %/S: 11.6 %)     hypothetical protein {}
5091.1  1.1      33 % (Q: 56.3 %/S:  8.0 %)     hypothetical protein {}
5095.1  1.1      27 % (Q: 89.9 %/S: 76.1 %)     hypothetical protein {}
5099.1  1.1      28 % (Q: 88.8 %/S:  6.3 %)     hypothetical protein {}
5101.1  1.1      34 % (Q: 77.1 %/S: 12.5 %)     hypothetical protein {}
5102.1  1.1      34 % (Q:104.0 %/S: 14.9 %)     hypothetical protein (xxxX) {xxx}
5107.1  1.1      24 % (Q: 51.3 %/S: 55.3 %)     hypothetical protein {}
5108.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5112.1  1.1      22 % (Q: 78.5 %/S: 28.1 %)     hypothetical protein {}
5114.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5119.1  1.1      33 % (Q: 79.3 %/S: 10.4 %)     hypothetical protein {}
5124.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5125.1  1.1      34 % (Q: 90.1 %/S:  7.5 %)     hypothetical protein {}
5129.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5130.1  1.1      33 % (Q: 81.5 %/S: 16.5 %)     hypothetical protein {}
5135.1  1.1      39 % (Q: 51.0 %/S: 44.2 %)     hypothetical protein {}
5137.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5138.1  1.1      35 % (Q: 53.1 %/S:  8.0 %)     hypothetical protein {}
5144.1  1.1      44 % (Q: 42.6 %/S:  3.5 %)     hypothetical protein {}
5146.1  1.1      40 % (Q: 47.4 %/S: 20.3 %)     hypothetical protein {}
5149.1  1.1      31 % (Q: 84.1 %/S: 20.1 %)     hypothetical protein (xxxX) {xxx}
5151.1  1.1      42 % (Q: 46.5 %/S: 56.6 %)     hypothetical protein {}
5155.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5157.1  1.1      33 % (Q: 93.8 %/S: 10.5 %)     hypothetical protein {}
5163.1  1.1      38 % (Q: 51.4 %/S:  3.1 %)     hypothetical protein {}
5164.1  1.1      36 % (Q: 62.0 %/S:  3.3 %)     hypothetical protein {}
5165.1  1.1      46 % (Q: 21.5 %/S:  7.0 %)     hypothetical protein {}
5166.1  1.1      26 % (Q: 76.7 %/S:  3.4 %)     hypothetical protein {}
5167.1  1.1      28 % (Q: 93.7 %/S:  6.7 %)     hypothetical protein {}
5171.1  1.1      25 % (Q: 95.6 %/S:  9.4 %)     hypothetical protein {}
5175.1  1.1      50 % (Q: 29.8 %/S: 13.3 %)     hypothetical protein {}
5179.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5180.1  1.1      26 % (Q: 49.0 %/S: 13.8 %)     hypothetical protein {}
5183.1  1.1      33 % (Q: 87.4 %/S: 21.2 %)     hypothetical protein {}
5184.1  1.1      37 % (Q: 41.1 %/S:  8.2 %)     hypothetical protein {}
5185.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5193.1  1.1      26 % (Q: 69.5 %/S: 37.1 %)     hypothetical protein (xxxX) {xxx}
5194.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5195.1  1.1      34 % (Q: 67.6 %/S: 15.2 %)     hypothetical protein (xxxX) {xxx}
5196.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
5201.1  1.1      37 % (Q: 33.0 %/S: 22.6 %)     hypothetical protein (xxxX) {xxx}
5202.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
5204.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5205.1  1.1      42 % (Q: 60.3 %/S:  3.7 %)     hypothetical protein (xxxX) {xxx}
5207.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
5208.1  1.1      34 % (Q: 81.7 %/S: 27.0 %)     hypothetical protein (xxxX) {xxx}
5209.1  1.1      42 % (Q: 37.3 %/S:  7.1 %)     hypothetical protein (xxxX) {xxx}
5212.1  1.1      44 % (Q: 30.9 %/S: 14.5 %)     hypothetical protein (xxxX) {xxx}
5219.1  1.1      30 % (Q: 38.5 %/S: 19.1 %)     hypothetical protein {}
5222.1  1.1      34 % (Q: 48.3 %/S: 16.8 %)     hypothetical protein {}
5224.1  1.1      38 % (Q: 50.0 %/S: 18.6 %)     hypothetical protein {}
5226.1  1.1      28 % (Q: 47.2 %/S: 15.0 %)     hypothetical protein {}
5227.1  1.1      44 % (Q: 32.5 %/S:  8.0 %)     hypothetical protein {}
5228.1  1.1      34 % (Q: 84.7 %/S: 13.0 %)     hypothetical protein {}
5229.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5230.1  1.1      28 % (Q: 64.3 %/S:  6.1 %)     hypothetical protein {}
5231.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5233.1  1.1      42 % (Q: 46.9 %/S: 12.9 %)     hypothetical protein {}
5236.1  1.1      24 % (Q: 81.0 %/S: 10.1 %)     hypothetical protein {}
5237.1  1.1      40 % (Q: 52.5 %/S:  8.0 %)     hypothetical protein {}
5238.1  1.1      40 % (Q: 51.6 %/S: 15.0 %)     hypothetical protein {}
5240.1  1.1      26 % (Q: 98.7 %/S: 18.1 %)     hypothetical protein {}
5241.1  1.1      28 % (Q:100.0 %/S: 76.8 %)     hypothetical protein {}
5242.1  1.1      33 % (Q: 66.7 %/S: 10.9 %)     hypothetical protein {}
5243.1  1.1      29 % (Q: 66.2 %/S:  8.7 %)     hypothetical protein {}
5244.1  1.1      34 % (Q: 61.2 %/S:  5.2 %)     hypothetical protein {}
5251.1  1.1      27 % (Q: 93.0 %/S: 13.6 %)     hypothetical protein {}
5253.1  1.1      28 % (Q: 70.7 %/S:  6.7 %)     hypothetical protein (xxxX) {xxx}
5258.1  1.1      33 % (Q: 41.5 %/S:  8.8 %)     hypothetical protein (xxxX) {xxx}
5260.1  1.1      25 % (Q: 68.5 %/S: 30.9 %)     hypothetical protein (xxxX) {xxx}
5263.1  1.1      35 % (Q: 36.4 %/S:  4.8 %)     hypothetical protein {}
5266.1  1.1      33 % (Q: 42.0 %/S:  4.6 %)     hypothetical protein {}
5267.1  1.1      33 % (Q: 80.3 %/S: 13.7 %)     hypothetical protein {}
5268.1  1.1      29 % (Q: 39.8 %/S: 11.8 %)     hypothetical protein (xxxX) {xxx}
5272.1  1.1      26 % (Q: 91.9 %/S: 13.4 %)     hypothetical protein {}
5276.1  1.1      27 % (Q: 77.1 %/S: 20.8 %)     hypothetical protein {}
5279.1  1.1      45 % (Q: 60.7 %/S: 26.4 %)     hypothetical protein {}
5282.1  1.1      40 % (Q: 50.8 %/S: 36.5 %)     hypothetical protein (xxxX) {xxx}
5287.1  1.1      50 % (Q: 26.4 %/S:  2.2 %)     hypothetical protein (xxxX) {xxx}
5290.1  1.1      33 % (Q: 27.6 %/S: 17.7 %)     hypothetical protein (xxxX) {Mesorhizobium loti}
5291.1  1.1      36 % (Q: 73.5 %/S:  8.1 %)     hypothetical protein {}
5292.1  1.1      33 % (Q: 50.0 %/S:  8.9 %)     hypothetical protein {}
5294.1  1.1      37 % (Q: 62.5 %/S:  9.4 %)     hypothetical protein {}
5299.1  1.1      42 % (Q: 36.1 %/S: 11.9 %)     hypothetical protein (xxxX) {xxx}
5303.1  1.1      28 % (Q: 94.4 %/S: 16.2 %)     hypothetical protein {}
5305.1  1.1      35 % (Q: 39.5 %/S:  6.2 %)     hypothetical protein {}
5308.1  1.1      45 % (Q: 50.7 %/S:  5.0 %)     hypothetical protein {}
5309.1  1.1      33 % (Q: 31.0 %/S: 11.7 %)     hypothetical protein {}
5311.1  1.1      38 % (Q: 33.1 %/S: 15.8 %)     hypothetical protein (xxxX) {xxx}
5312.1  1.1      27 % (Q: 98.0 %/S: 45.3 %)     hypothetical protein (xxxX) {xxx}
5316.1  1.1      29 % (Q: 78.0 %/S: 21.7 %)     hypothetical protein {}
5318.1  1.1      38 % (Q: 75.0 %/S: 98.4 %)     hypothetical protein {}
5322.1  1.1      37 % (Q: 42.9 %/S:  1.6 %)     hypothetical protein {}
5323.1  1.1      32 % (Q: 60.9 %/S: 10.3 %)     hypothetical protein {}
5324.1  1.1      36 % (Q: 52.7 %/S: 11.0 %)     hypothetical protein {}
5327.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5328.1  1.1      57 % (Q: 39.4 %/S:  1.2 %)     hypothetical protein (xxxX) {xxx}
5334.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5336.1  1.1      32 % (Q: 50.8 %/S:  5.3 %)     hypothetical protein {}
5337.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5340.1  1.1      37 % (Q: 87.6 %/S: 88.6 %)     hypothetical protein {}
5349.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5350.1  1.1      28 % (Q: 98.3 %/S: 12.8 %)     hypothetical protein {}
5353.1  1.1      31 % (Q: 69.9 %/S: 21.6 %)     hypothetical protein {}
5357.1  1.1      68 % (Q: 21.9 %/S: 18.6 %)     hypothetical protein {}
5359.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5360.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5363.1  1.1      26 % (Q: 54.2 %/S:  5.2 %)     hypothetical protein {}
5369.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5373.1  1.1      30 % (Q: 79.2 %/S: 18.6 %)     hypothetical protein {}
5378.1  1.1      43 % (Q: 57.8 %/S: 15.9 %)     hypothetical protein {}
5383.1  1.1      33 % (Q: 55.8 %/S: 14.9 %)     hypothetical protein {}
5384.1  1.1      28 % (Q: 71.5 %/S:  8.7 %)     hypothetical protein {}
5385.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5387.1  1.1      34 % (Q: 65.2 %/S: 20.5 %)     hypothetical protein {}
5388.1  1.1      24 % (Q: 59.1 %/S: 22.4 %)     hypothetical protein {}
5391.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5393.1  1.1      32 % (Q: 75.6 %/S: 12.7 %)     hypothetical protein {}
5394.1  1.1      28 % (Q: 55.8 %/S: 50.0 %)     hypothetical protein {}
5397.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5400.1  1.1      30 % (Q: 89.9 %/S: 15.2 %)     hypothetical protein {}
5401.1  1.1      32 % (Q: 82.8 %/S: 92.8 %)     hypothetical protein {}
5407.1  1.1      33 % (Q: 56.7 %/S: 24.6 %)     hypothetical protein {}
5408.1  1.1      36 % (Q: 46.8 %/S:  9.7 %)     hypothetical protein {}
5410.1  1.1      37 % (Q: 65.6 %/S:  7.9 %)     hypothetical protein {}
5417.1  1.1      30 % (Q: 76.5 %/S: 87.6 %)     hypothetical protein {}
5425.1  1.1      33 % (Q: 49.4 %/S:  7.4 %)     hypothetical protein {}
5426.1  1.1      29 % (Q: 68.6 %/S: 13.0 %)     hypothetical protein {}
5427.1  1.1      32 % (Q: 50.8 %/S:  4.0 %)     hypothetical protein {}
5432.1  1.1      27 % (Q: 40.4 %/S: 29.4 %)     hypothetical protein {}
5433.1  1.1      30 % (Q: 43.7 %/S: 36.4 %)     hypothetical protein {}
5436.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5441.1  1.1      30 % (Q: 49.5 %/S:  4.7 %)     hypothetical protein {}
5443.1  1.1      34 % (Q: 68.4 %/S: 10.6 %)     hypothetical protein {}
5448.1  1.1      25 % (Q: 75.7 %/S:  4.9 %)     hypothetical protein {}
5452.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5453.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5454.1  1.1      43 % (Q: 81.1 %/S: 74.1 %)     hypothetical protein {}
5459.1  1.1      30 % (Q: 52.2 %/S:100.0 %)     hypothetical protein {}
5460.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5465.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
5466.1  1.1      30 % (Q: 48.4 %/S: 58.2 %)     hypothetical protein (xxxX) {xxx}
5472.1  1.1      28 % (Q: 35.2 %/S: 24.6 %)     hypothetical protein (xxxX) {xxx}
5473.1  1.1      43 % (Q: 33.0 %/S:  6.9 %)     hypothetical protein {}
5477.1  1.1      50 % (Q: 63.5 %/S: 69.0 %)     hypothetical protein (xxxX) {xxx}
5478.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
5479.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
5480.1  1.1      30 % (Q:100.9 %/S: 16.3 %)     hypothetical protein (xxxX) {xxx}
5481.1  1.1      38 % (Q: 51.4 %/S: 22.0 %)     hypothetical protein (xxxX) {xxx}
5483.1  1.1      26 % (Q: 58.2 %/S: 26.9 %)     hypothetical protein (xxxX) {xxx}
5484.1  1.1      31 % (Q: 57.9 %/S: 50.2 %)     hypothetical protein (xxxX) {xxx}
5485.1  1.1      37 % (Q: 76.3 %/S: 77.1 %)     hypothetical protein (xxxX) {xxx}
5489.1  1.1      31 % (Q: 77.3 %/S: 22.3 %)     hypothetical protein (xxxX) {xxx}
5490.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
5495.1  1.1      26 % (Q: 92.0 %/S: 47.1 %)     hypothetical protein (xxxX) {xxx}
5496.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
5501.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5509.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5512.1  1.1      35 % (Q: 64.2 %/S: 52.8 %)     hypothetical protein {}
5513.1  1.1      27 % (Q: 69.3 %/S:  7.5 %)     hypothetical protein {}
5514.1  1.1      30 % (Q: 87.5 %/S: 23.7 %)     hypothetical protein {}
5515.1  1.1      26 % (Q: 88.9 %/S: 24.8 %)     hypothetical protein {}
5520.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5522.1  1.1      46 % (Q: 35.7 %/S: 11.4 %)     hypothetical protein {}
5524.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5525.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5528.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5530.1  1.1      23 % (Q: 91.7 %/S: 92.5 %)     hypothetical protein {}
5539.1  1.1      45 % (Q: 45.2 %/S: 21.4 %)     hypothetical protein {}
5540.1  1.1      28 % (Q: 51.5 %/S: 27.3 %)     hypothetical protein {}
5545.1  1.1      36 % (Q: 71.0 %/S:  8.9 %)     hypothetical protein {}
5548.1  1.1      27 % (Q: 97.2 %/S: 10.4 %)     hypothetical protein {}
5551.1  1.1      36 % (Q: 50.0 %/S: 23.6 %)     hypothetical protein {}
5552.1  1.1      31 % (Q: 15.0 %/S: 39.4 %)     hypothetical protein {}
5553.1  1.1      27 % (Q: 66.3 %/S: 46.0 %)     hypothetical protein {}
5554.1  1.1      32 % (Q: 81.9 %/S: 13.6 %)     hypothetical protein {}
5562.1  1.1      24 % (Q: 71.2 %/S: 39.4 %)     hypothetical protein {}
5571.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5572.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5573.1  1.1      40 % (Q: 63.2 %/S: 16.3 %)     hypothetical protein {}
5574.1  1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
5575.1  1.1      40 % (Q: 56.5 %/S:  4.8 %)     hypothetical protein {}
5578.1  1.1      61 % (Q: 20.0 %/S:  3.2 %)     hypothetical protein {}
5582.1  1.1      48 % (Q: 38.2 %/S: 20.4 %)     hypothetical protein {}
6001.1  2.1      29 % (Q: 32.5 %/S: 13.8 %)     hypothetical protein {}
6002.1  2.1      40 % (Q: 28.8 %/S: 11.4 %)     hypothetical protein {}
6003.1  2.1      25 % (Q: 28.0 %/S: 14.4 %)     hypothetical protein {}
6006.1  2.1      31 % (Q: 56.8 %/S: 35.9 %)     hypothetical protein {}
6010.1  2.1      32 % (Q: 45.3 %/S: 12.1 %)     hypothetical protein {}
6012.1  2.1      25 % (Q:106.0 %/S: 24.4 %)     hypothetical protein {}
6014.1  2.1      47 % (Q: 53.2 %/S:  8.1 %)     hypothetical protein {}
6015.1  2.1      25 % (Q: 61.7 %/S: 58.2 %)     hypothetical protein (xxxX) {Mesorhizobium loti}
6016.1  2.1      26 % (Q: 46.6 %/S: 69.2 %)     hypothetical protein {}
6020.1  2.1      33 % (Q: 45.2 %/S: 17.3 %)     hypothetical protein {}
6022.1  2.1      25 % (Q: 91.3 %/S: 10.5 %)     hypothetical protein {}
6023.1  2.1      31 % (Q: 53.1 %/S: 27.0 %)     hypothetical protein {}
6025.1  2.1      29 % (Q: 40.0 %/S: 16.4 %)     hypothetical protein {}
6028.1  2.1      33 % (Q: 79.8 %/S: 65.9 %)     hypothetical protein {}
6029.1  2.1      32 % (Q: 51.7 %/S: 50.3 %)     hypothetical protein {}
6031.1  2.1      37 % (Q: 69.6 %/S: 17.4 %)     hypothetical protein {}
6032.1  2.1      31 % (Q: 73.5 %/S:  4.9 %)     hypothetical protein {}
6033.1  2.1      39 % (Q: 62.2 %/S:  9.7 %)     hypothetical protein {}
6036.1  2.1      31 % (Q:106.1 %/S: 20.6 %)     hypothetical protein {}
6040.1  2.1      26 % (Q: 58.5 %/S: 39.0 %)     hypothetical protein {}
6041.1  2.1      38 % (Q: 42.4 %/S: 18.3 %)     hypothetical protein {}
6042.1  2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
6044.1  2.1      34 % (Q: 58.8 %/S: 41.6 %)     hypothetical protein {}
6046.1  2.1      36 % (Q: 76.5 %/S: 10.8 %)     hypothetical protein {}
6048.1  2.1      30 % (Q: 77.6 %/S: 65.2 %)     hypothetical protein (xxxX) {Mesorhizobium loti}
6054.1  2.1      63 % (Q: 39.0 %/S: 34.9 %)     hypothetical protein (xxxX) {Mesorhizobium loti}
6056.1  2.1      38 % (Q: 52.3 %/S:  4.9 %)     hypothetical protein {}
6057.1  2.1      33 % (Q: 55.9 %/S:  8.0 %)     hypothetical protein {}
6058.1  2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
6064.1  2.1      31 % (Q: 38.6 %/S: 30.1 %)     hypothetical protein {}
6065.1  2.1      28 % (Q: 72.4 %/S: 13.2 %)     hypothetical protein {}
6066.1  2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
6069.1  2.1      32 % (Q: 74.2 %/S:  7.6 %)     hypothetical protein {}
6070.1  2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
6072.1  2.1      30 % (Q: 79.7 %/S:  9.8 %)     hypothetical protein {}
6075.1  2.1      35 % (Q: 50.3 %/S: 21.3 %)     hypothetical protein (xxxX) {xxx}
6081.1  2.1      35 % (Q: 87.0 %/S:  8.2 %)     hypothetical protein {}
6082.1  2.1      36 % (Q: 22.2 %/S: 13.3 %)     hypothetical protein {}
6090.1  2.1      26 % (Q: 84.2 %/S: 37.9 %)     hypothetical protein {}
6094.1  2.1      56 % (Q: 16.3 %/S:  2.3 %)     hypothetical protein {}
6096.1  2.1      34 % (Q: 47.4 %/S: 30.0 %)     hypothetical protein (xxxX) {xxx}
6097.1  2.1      34 % (Q: 46.5 %/S:  2.2 %)     hypothetical protein {}
6098.1  2.1      30 % (Q: 74.1 %/S:  7.4 %)     hypothetical protein {}
6099.1  2.1      33 % (Q: 66.0 %/S:100.0 %)     hypothetical protein {}
6101.1  2.1      50 % (Q: 17.4 %/S:  8.5 %)     hypothetical protein (xxxX) {xxx}
6110.1  2.1      30 % (Q: 24.4 %/S: 12.5 %)     hypothetical protein {}
6112.1  2.1      33 % (Q: 46.7 %/S: 13.4 %)     hypothetical protein {}
6113.1  2.1      34 % (Q: 60.3 %/S: 67.5 %)     hypothetical protein {}
6114.1  2.1      42 % (Q: 43.2 %/S: 21.6 %)     hypothetical protein {}
6117.1  2.1      35 % (Q: 76.9 %/S: 13.1 %)     hypothetical protein {}
6119.1  2.1      32 % (Q: 82.4 %/S: 16.3 %)     hypothetical protein {}
6120.1  2.1      30 % (Q: 33.3 %/S:  7.6 %)     hypothetical protein {}
6122.1  2.1      47 % (Q: 50.7 %/S: 14.3 %)     hypothetical protein {}
6123.1  2.1      37 % (Q: 32.6 %/S:  2.2 %)     hypothetical protein {}
6125.1  2.1      23 % (Q: 56.1 %/S: 14.7 %)     hypothetical protein {}
6126.1  2.1      31 % (Q: 40.1 %/S: 40.1 %)     hypothetical protein {}
6130.1  2.1      44 % (Q: 41.4 %/S: 25.9 %)     hypothetical protein {}
6131.1  2.1      31 % (Q: 24.6 %/S:  2.4 %)     hypothetical protein {}
6133.1  2.1      47 % (Q: 42.2 %/S:  5.3 %)     hypothetical protein {}
6145.1  2.1      35 % (Q: 31.5 %/S: 24.4 %)     hypothetical protein {}
6155.1  2.1      31 % (Q: 53.5 %/S:  1.4 %)     hypothetical protein {}
6156.1  2.1      18 % (Q: 52.8 %/S: 38.4 %)     hypothetical protein {}
6157.1  2.1      28 % (Q: 89.3 %/S:  3.0 %)     hypothetical protein {}
6159.1  2.1      61 % (Q: 21.5 %/S: 33.3 %)     hypothetical protein {}
6160.1  2.1      33 % (Q: 36.3 %/S: 21.6 %)     hypothetical protein {}
6161.1  2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
6162.1  2.1      36 % (Q: 86.2 %/S: 20.3 %)     hypothetical protein {}
6163.1  2.1      43 % (Q: 30.0 %/S:  2.3 %)     hypothetical protein {}
6166.1  2.1      30 % (Q: 65.6 %/S:  5.0 %)     hypothetical protein {}
6167.1  2.1      37 % (Q: 43.4 %/S:  2.7 %)     hypothetical protein {}
6169.1  2.1      28 % (Q: 41.5 %/S: 12.0 %)     hypothetical protein {}
6170.1  2.1      65 % (Q: 29.9 %/S:  3.5 %)     hypothetical protein {}
6171.1  2.1      54 % (Q: 34.4 %/S:  9.6 %)     hypothetical protein {}
6174.1  2.1      36 % (Q: 50.0 %/S:  9.5 %)     hypothetical protein {}
6175.1  2.1      41 % (Q: 36.0 %/S: 18.8 %)     hypothetical protein {}
6181.1  2.1      36 % (Q: 77.8 %/S:  8.9 %)     hypothetical protein {}
6183.1  2.1      34 % (Q: 56.2 %/S: 20.2 %)     hypothetical protein {}
6184.1  2.1      26 % (Q: 65.2 %/S:  8.0 %)     hypothetical protein {}
6185.1  2.1      38 % (Q: 55.3 %/S: 49.0 %)     hypothetical protein {}
6187.1  2.1      33 % (Q: 92.3 %/S: 28.5 %)     hypothetical protein
6191.1  2.1      34 % (Q: 49.0 %/S:  6.1 %)     hypothetical protein {}
6192.1  2.1      41 % (Q: 64.8 %/S: 11.7 %)     hypothetical protein {}
6193.1  2.1      31 % (Q: 62.2 %/S: 11.8 %)     hypothetical protein {}
6194.1  2.1      40 % (Q: 48.6 %/S: 18.1 %)     hypothetical protein {}
6196.1  2.1      26 % (Q: 55.1 %/S:  6.3 %)     hypothetical protein {}
6197.1  2.1      45 % (Q: 54.1 %/S:  5.2 %)     hypothetical protein {}
6199.1  2.1      28 % (Q: 90.3 %/S:  8.4 %)     hypothetical protein {}
6200.1  2.1      52 % (Q: 30.2 %/S:  8.2 %)     hypothetical protein {}
6202.1  2.1      34 % (Q: 62.3 %/S:  4.5 %)     hypothetical protein {}
6203.1  2.1      41 % (Q: 39.1 %/S:  1.3 %)     hypothetical protein {}
6204.1  2.1      41 % (Q: 61.9 %/S:  4.5 %)     hypothetical protein {}
6205.1  2.1      30 % (Q: 54.1 %/S: 17.7 %)     hypothetical protein {}
6207.1  2.1      30 % (Q: 67.1 %/S:  6.2 %)     hypothetical protein {}
6209.1  2.1      32 % (Q: 71.8 %/S: 12.4 %)     hypothetical protein {}
6212.1  2.1      33 % (Q: 78.8 %/S: 12.9 %)     hypothetical protein {}
6215.1  2.1      36 % (Q: 74.5 %/S: 35.2 %)     hypothetical protein {}
6218.1  2.1      28 % (Q: 56.7 %/S: 15.5 %)     hypothetical protein {}
6219.1  2.1      32 % (Q: 42.3 %/S:  5.6 %)     hypothetical protein {}
6222.1  2.1      36 % (Q: 49.5 %/S:  8.9 %)     hypothetical protein {}
6223.1  2.1      32 % (Q: 72.1 %/S: 30.1 %)     hypothetical protein {}
6227.1  2.1      26 % (Q: 49.4 %/S: 17.6 %)     hypothetical protein {}
6229.1  2.1      34 % (Q: 30.5 %/S:  2.9 %)     hypothetical protein {}
6231.1  2.1      33 % (Q: 74.2 %/S:  3.8 %)     hypothetical protein {}
6237.1  2.1      22 % (Q: 96.8 %/S: 16.4 %)     hypothetical protein {}
6238.1  2.1      39 % (Q: 65.3 %/S: 70.2 %)     hypothetical protein {}
6245.1  2.1      28 % (Q: 78.4 %/S: 52.5 %)     hypothetical protein {}
6251.1  2.1      28 % (Q: 75.0 %/S:  4.4 %)     hypothetical protein {}
6254.1  2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
6257.1  2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
6260.1  2.1      31 % (Q: 43.7 %/S: 13.3 %)     hypothetical protein {}
6261.1  2.1      36 % (Q: 46.1 %/S: 21.5 %)     hypothetical protein (xxxX) {Mesorbizobium loti}
6264.1  2.1      61 % (Q:100.0 %/S: 55.7 %)     hypothetical protein {}
6266.1  2.1      31 % (Q: 50.7 %/S:  7.2 %)     hypothetical protein {}
6267.1  2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
6268.1  2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
6273.1  2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
6274.1  2.1      31 % (Q: 92.4 %/S:  9.9 %)     hypothetical protein {}
6276.1  2.1      39 % (Q: 45.3 %/S:  8.4 %)     hypothetical protein {}
6277.1  2.1      37 % (Q: 17.1 %/S: 20.1 %)     hypothetical protein {}
6281.1  2.1      26 % (Q: 39.0 %/S: 15.8 %)     hypothetical protein {}
6283.1  2.1      29 % (Q: 58.8 %/S: 12.1 %)     hypothetical protein {}
6284.1  2.1      32 % (Q: 73.3 %/S:  3.0 %)     hypothetical protein {}
6287.1  2.1      42 % (Q: 43.7 %/S:  7.5 %)     hypothetical protein {}
6289.1  2.1      29 % (Q: 69.1 %/S: 12.7 %)     hypothetical protein {}
6291.1  2.1      42 % (Q: 39.2 %/S: 39.5 %)     hypothetical protein {}
6292.1  2.1      48 % (Q: 38.5 %/S:  4.2 %)     hypothetical protein {}
6293.1  2.1      25 % (Q:100.0 %/S: 22.4 %)     hypothetical protein {}
6297.1  2.1      38 % (Q: 40.2 %/S: 22.7 %)     hypothetical protein {}
6299.1  2.1      25 % (Q: 95.1 %/S: 33.1 %)     hypothetical protein {}
6301.1  2.1      45 % (Q: 63.3 %/S: 54.9 %)     hypothetical protein {}
6303.1  2.1      26 % (Q: 20.0 %/S: 42.9 %)     hypothetical protein {}
6304.1  2.1      24 % (Q: 84.7 %/S: 73.4 %)     hypothetical protein {}
6305.1  2.1      35 % (Q: 24.6 %/S: 48.0 %)     hypothetical protein {}
6307.1  2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
6310.1  2.1      34 % (Q: 32.2 %/S: 18.6 %)     hypothetical protein {}
6316.1  2.1      38 % (Q: 36.5 %/S: 70.7 %)     hypothetical protein {}
6317.1  2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
6318.1  2.1      25 % (Q: 77.8 %/S: 78.3 %)     hypothetical protein (xxxX) {Caulobacter crescentus}
6323.1  2.1      83 % (Q: 60.0 %/S:  9.5 %)     hypothetical protein {}
6324.1  2.1      33 % (Q: 89.0 %/S: 21.3 %)     hypothetical protein {}
6327.1  2.1      43 % (Q: 25.2 %/S: 17.4 %)     hypothetical protein {}
6328.1  2.1      46 % (Q: 39.0 %/S:  6.8 %)     hypothetical protein {}
6331.1  2.1      35 % (Q: 58.3 %/S: 11.4 %)     hypothetical protein {}
6332.1  2.1      39 % (Q: 14.2 %/S:  4.6 %)     hypothetical protein {}
6334.1  2.1      38 % (Q: 32.6 %/S:  9.7 %)     hypothetical protein {}
6337.1  2.1      34 % (Q: 45.5 %/S: 20.3 %)     hypothetical protein {}
6340.1  2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
7000.1  3.1      30 % (Q: 69.2 %/S:  8.9 %)     hypothetical protein {}
7002.1  3.1      27 % (Q: 80.2 %/S: 16.7 %)     hypothetical protein {}
7006.1  3.1      46 % (Q: 21.1 %/S:  4.6 %)     hypothetical protein {}
7010.1  3.1      40 % (Q: 65.0 %/S:  4.5 %)     hypothetical protein {}
7011.1  3.1      25 % (Q: 86.9 %/S: 24.3 %)     hypothetical protein {}
7012.1  3.1      33 % (Q: 59.0 %/S: 18.3 %)     hypothetical protein {}
7013.1  3.1      28 % (Q: 56.4 %/S: 25.7 %)     hypothetical protein (xxxX) {xxx}
7014.1  3.1      50 % (Q: 53.5 %/S: 25.9 %)     hypothetical protein {}
7018.1  3.1      46 % (Q: 53.6 %/S:  8.8 %)     hypothetical protein {}
7019.1  3.1      24 % (Q: 77.1 %/S: 22.6 %)     hypothetical protein (xxxX) {xxx}
7023.1  3.1      52 % (Q: 33.8 %/S:  2.1 %)     hypothetical protein (xxxX) {xxx}
7024.1  3.1      23 % (Q: 85.1 %/S: 78.5 %)     hypothetical protein (xxxX) {xxx}
7026.1  3.1      26 % (Q:103.1 %/S: 41.9 %)     hypothetical protein (xxxX) {xxx}
7027.1  3.1      41 % (Q: 45.6 %/S:  9.6 %)     hypothetical protein (xxxX) {xxx}
7028.1  3.1      30 % (Q: 62.8 %/S: 62.8 %)     hypothetical protein (xxxX) {xxx}
7030.1  3.1      29 % (Q: 61.0 %/S: 77.2 %)     hypothetical protein (xxxX) {xxx}
7032.1  3.1      30 % (Q: 46.2 %/S: 16.3 %)     hypothetical protein (xxxX) {xxx}
7033.1  3.1      39 % (Q: 54.7 %/S:  8.6 %)     hypothetical protein (xxxX) {xxx}
7035.1  3.1      39 % (Q: 62.9 %/S: 27.6 %)     hypothetical protein (xxxX) {xxx}
7037.1  3.1      64 % (Q: 46.2 %/S: 49.4 %)     hypothetical protein {}
7038.1  3.1      36 % (Q: 70.3 %/S: 61.9 %)     hypothetical protein (xxxX) {xxx}
7040.1  3.1      70 % (Q: 45.0 %/S:  7.8 %)     hypothetical protein (xxxX) {xxx}
7041.1  3.1      82 % (Q:100.0 %/S: 94.1 %)     hypothetical protein (xxxX) {xxx}
7046.1  3.1      34 % (Q: 72.5 %/S: 55.6 %)     hypothetical protein (xxxX) {xxx}
7048.1  3.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {Mesorhizobium loti}
7054.1  3.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein (xxxX) {xxx}
7058.1  3.1      36 % (Q: 60.3 %/S:  6.0 %)     hypothetical protein {}
7063.1  3.1      24 % (Q: 80.2 %/S: 18.0 %)     hypothetical protein {}
7067.1  3.1      33 % (Q: 98.6 %/S:  4.5 %)     hypothetical protein {}
7071.1  3.1      42 % (Q: 86.2 %/S: 75.8 %)     hypothetical protein {}
7074.1  3.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
7075.1  3.1      28 % (Q: 51.1 %/S: 30.6 %)     hypothetical protein {}
7076.1  3.1      24 % (Q: 98.1 %/S: 84.9 %)     hypothetical protein {}
7077.1  3.1      52 % (Q: 50.7 %/S: 52.2 %)     hypothetical protein {}
7080.1  3.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
7081.1  3.1      41 % (Q: 40.6 %/S:  3.7 %)     hypothetical protein {}
7084.1  3.1      28 % (Q: 52.7 %/S:  5.5 %)     hypothetical protein {}
7085.1  3.1      34 % (Q: 61.0 %/S:  4.3 %)     hypothetical protein {}
7088.1  3.1      25 % (Q: 50.6 %/S: 18.2 %)     hypothetical protein {}
7091.1  3.1      32 % (Q: 35.7 %/S: 32.3 %)     hypothetical protein {}
7092.1  3.1      25 % (Q: 76.3 %/S:  6.2 %)     hypothetical protein {}
7095.1  3.1      37 % (Q: 45.3 %/S:  7.9 %)     hypothetical protein {}
7096.1  3.1      31 % (Q: 84.0 %/S: 14.0 %)     hypothetical protein {}
7101.1  3.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
7103.1  3.1      43 % (Q: 52.9 %/S: 38.0 %)     hypothetical protein {}
7104.1  3.1      40 % (Q: 57.0 %/S:  4.0 %)     hypothetical protein {}
7105.1  3.1      27 % (Q: 80.1 %/S: 39.9 %)     hypothetical protein {}
7106.1  3.1      29 % (Q: 52.8 %/S: 21.3 %)     hypothetical protein {}
7107.1  3.1      27 % (Q: 62.5 %/S: 18.4 %)     hypothetical protein {}
7108.1  3.1      45 % (Q: 33.6 %/S: 19.0 %)     hypothetical protein {}
7110.1  3.1      48 % (Q: 88.5 %/S: 17.8 %)     hypothetical protein {}
7111.1  3.1      35 % (Q: 76.1 %/S: 10.5 %)     hypothetical protein {}
7114.1  3.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
8000.1  4.1      33 % (Q: 54.3 %/S:  6.2 %)     hypothetical protein {}
8001.1  4.1      40 % (Q: 40.0 %/S:  8.5 %)     hypothetical protein {}
8004.1  4.1      32 % (Q: 88.7 %/S:  7.4 %)     hypothetical protein {}
8010.1  4.1      33 % (Q: 81.0 %/S: 22.5 %)     hypothetical protein {}
8011.1  4.1      33 % (Q: 76.6 %/S:  9.7 %)     hypothetical protein {}
8016.1  4.1      30 % (Q: 75.5 %/S:  9.3 %)     hypothetical protein {}
10004.1 1.1      30 % (Q: 68.7 %/S: 10.4 %)     hypothetical protein {}
10006.1 1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
10007.1 1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
10009.1 1.1      30 % (Q: 39.7 %/S:  2.4 %)     hypothetical protein {}
10011.1 1.1      36 % (Q: 57.6 %/S:  8.9 %)     hypothetical protein {}
10015.1 1.1      32 % (Q: 32.8 %/S:  5.6 %)     hypothetical protein {}
10017.1 1.1      37 % (Q: 46.8 %/S: 11.1 %)     hypothetical protein {}
10018.1 1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
10020.1 1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
10021.1 1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
10023.1 1.1      32 % (Q: 32.8 %/S:  5.6 %)     hypothetical protein {}
10024.1 1.1      39 % (Q: 64.8 %/S:  5.2 %)     hypothetical protein {}
10025.1 1.1      22 % (Q: 78.7 %/S: 23.3 %)     hypothetical protein {}
10026.1 1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
10029.1 1.1      36 % (Q: 64.2 %/S: 11.2 %)     hypothetical protein {}
10030.1 1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
10031.1 1.1      35 % (Q: 66.7 %/S: 12.7 %)     hypothetical protein {}
10032.1 1.1      41 % (Q: 55.7 %/S:  8.5 %)     hypothetical protein {}
10033.1 1.1      37 % (Q: 58.3 %/S: 15.6 %)     hypothetical protein {}
10036.1 1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
10039.1 1.1      37 % (Q: 49.2 %/S:  7.7 %)     hypothetical protein {}
10040.1 1.1      31 % (Q: 82.7 %/S: 71.1 %)     hypothetical protein {}
10044.1 1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
10045.1 1.1      28 % (Q: 71.2 %/S: 11.9 %)     hypothetical protein {}
10046.1 1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
10047.1 1.1      42 % (Q: 52.1 %/S: 10.1 %)     hypothetical protein {}
10050.1 1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
10051.1 1.1      23 % (Q: 34.4 %/S: 37.8 %)     hypothetical protein {}
10052.1 1.1      30 % (Q: 84.4 %/S: 23.1 %)     hypothetical protein {}
10053.1 1.1      38 % (Q: 81.9 %/S: 67.0 %)     hypothetical protein {}
10056.1 1.1      24 % (Q: 82.7 %/S:  9.6 %)     hypothetical protein {}
10057.1 1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
10058.1 1.1      40 % (Q: 52.4 %/S:  1.9 %)     hypothetical protein {}
10060.1 1.1      32 % (Q: 71.0 %/S: 12.0 %)     hypothetical protein {}
10061.1 1.1      31 % (Q: 75.0 %/S: 32.8 %)     hypothetical protein {}
10062.1 1.1      36 % (Q: 42.0 %/S:  5.5 %)     hypothetical protein {}
10064.1 1.1      28 % (Q: 74.6 %/S:  6.3 %)     hypothetical protein {}
10066.1 1.1      40 % (Q: 65.6 %/S: 14.7 %)     hypothetical protein {}
10071.1 1.1      25 % (Q: 94.3 %/S:  5.1 %)     hypothetical protein {}
10073.1 1.1      32 % (Q: 93.3 %/S: 14.2 %)     hypothetical protein {}
10074.1 1.1      34 % (Q: 33.3 %/S:  4.2 %)     hypothetical protein {}
10075.1 1.1      39 % (Q: 89.7 %/S: 69.3 %)     hypothetical protein {}
10079.1 1.1      30 % (Q: 78.4 %/S: 22.3 %)     hypothetical protein {}
10080.1 1.1      25 % (Q: 76.9 %/S:  9.7 %)     hypothetical protein {}
10081.1 1.1      32 % (Q: 47.3 %/S: 24.0 %)     hypothetical protein {}
10083.1 1.1      33 % (Q: 64.6 %/S:  9.5 %)     hypothetical protein {}
10085.1 1.1      32 % (Q: 66.3 %/S: 10.9 %)     hypothetical protein {}
10086.1 1.1      33 % (Q: 83.5 %/S: 89.6 %)     hypothetical protein {}
10087.1 1.1      54 % (Q: 30.8 %/S:  2.2 %)     hypothetical protein {}
10088.1 1.1      26 % (Q: 95.9 %/S: 54.3 %)     hypothetical protein {}
10089.1 1.1      32 % (Q: 80.7 %/S:  8.8 %)     hypothetical protein {}
10092.1 1.1      33 % (Q: 48.8 %/S: 13.8 %)     hypothetical protein {}
10095.1 1.1      41 % (Q: 60.8 %/S: 11.6 %)     hypothetical protein {}
10097.1 1.1      37 % (Q: 46.9 %/S: 11.1 %)     hypothetical protein {}
10099.1 1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
10103.1 1.1      29 % (Q: 90.3 %/S: 97.9 %)     hypothetical protein {}
10109.1 1.1      21 % (Q: 80.0 %/S:  2.5 %)     hypothetical protein {}
10110.1 1.1      35 % (Q: 50.0 %/S:  7.9 %)     hypothetical protein {}
10111.1 1.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
10112.1 1.1      38 % (Q: 49.3 %/S:  3.4 %)     hypothetical protein {}
10114.1 1.1      30 % (Q: 59.4 %/S: 28.0 %)     hypothetical protein {}
10115.1 1.1      32 % (Q: 50.0 %/S:  9.3 %)     hypothetical protein {}
10117.1 1.1      27 % (Q: 81.0 %/S:  7.3 %)     hypothetical protein {}
11000.1 2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
11001.1 2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
11002.1 2.1      33 % (Q: 63.9 %/S:  8.0 %)     hypothetical protein {}
11003.1 2.1      50 % (Q: 59.2 %/S: 50.0 %)     hypothetical protein {}
11004.1 2.1      32 % (Q: 80.7 %/S: 25.4 %)     hypothetical protein {}
11006.1 2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
11007.1 2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
11008.1 2.1      31 % (Q: 55.0 %/S: 21.2 %)     hypothetical protein {}
11009.1 2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
11011.1 2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
11012.1 2.1      31 % (Q: 50.0 %/S: 45.7 %)     hypothetical protein {}
11015.1 2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
11016.1 2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
11017.1 2.1      36 % (Q: 61.7 %/S: 37.3 %)     hypothetical protein {}
11018.1 2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
11019.1 2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
11021.1 2.1      30 % (Q: 72.3 %/S: 12.2 %)     hypothetical protein {}
11025.1 2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
11027.1 2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
11029.1 2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
11031.1 2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
11035.1 2.1      32 % (Q: 32.8 %/S:  5.6 %)     hypothetical protein {}
11040.1 2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
11042.1 2.1      32 % (Q: 56.1 %/S:  6.7 %)     hypothetical protein {}
11043.1 2.1      34 % (Q: 75.8 %/S:  6.3 %)     hypothetical protein {}
11044.1 2.1      29 % (Q: 76.0 %/S: 14.4 %)     hypothetical protein {}
11045.1 2.1      31 % (Q: 92.8 %/S:  6.7 %)     hypothetical protein {}
11046.1 2.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
11048.1 2.1      28 % (Q: 93.6 %/S: 87.4 %)     hypothetical protein {}
11050.1 2.1      60 % (Q: 22.0 %/S:  9.5 %)     hypothetical protein {}
11051.1 2.1      32 % (Q: 46.8 %/S: 17.9 %)     hypothetical protein {}
11052.1 2.1      40 % (Q: 52.2 %/S: 17.6 %)     hypothetical protein {}
11053.1 2.1      29 % (Q: 50.4 %/S: 36.4 %)     hypothetical protein {}
11055.1 2.1      43 % (Q: 45.7 %/S: 20.0 %)     hypothetical protein {}
12000.1 3.1      34 % (Q: 85.3 %/S: 21.2 %)     hypothetical protein {}
12001.1 3.1      28 % (Q: 58.9 %/S:  8.2 %)     hypothetical protein {}
12002.1 3.1      34 % (Q: 56.3 %/S: 13.2 %)     hypothetical protein {}
12004.1 3.1      36 % (Q: 74.6 %/S: 29.7 %)     hypothetical protein {}
12006.1 3.1      33 % (Q: 55.8 %/S: 12.5 %)     hypothetical protein {}
12007.1 3.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
12008.1 3.1      50 % (Q: 48.0 %/S:  3.3 %)     hypothetical protein {}
12009.1 3.1      27 % (Q: 85.3 %/S:  4.3 %)     hypothetical protein {}
12010.1 3.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
12012.1 3.1      36 % (Q: 43.8 %/S: 18.3 %)     hypothetical protein {}
12014.1 3.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
12016.1 3.1      32 % (Q: 77.5 %/S:  9.9 %)     hypothetical protein {}
12018.1 3.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
12019.1 3.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
12020.1 3.1      24 % (Q: 69.3 %/S: 52.2 %)     hypothetical protein {}
12021.1 3.1      30 % (Q: 55.7 %/S: 11.2 %)     hypothetical protein {}
13002.1 4.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}
13003.1 4.1       0 % (Q:  0.0 %/S:  0.0 %)     hypothetical protein {}

17.4. VIRULENCE/T-DNA PRODUCTION AND TRANSFER (16 genes)

2930.1  4.1     100 % (Q:100.0 %/S:100.0 %)     component of type IV secretion system (virB1) {Agrobacterium tumefaciens}
2932.1  4.1     100 % (Q:100.0 %/S:100.0 %)     component of type IV secretion system (virB3) {Agrobacterium tumefaciens}
2933.1  4.1      99 % (Q:100.0 %/S:100.0 %)     component of type IV secretion system (virB4) {Agrobacterium tumefaciens}
2934.1  4.1     100 % (Q:100.0 %/S:100.0 %)     component of type IV secretion system (virB5) {Agrobacterium tumefaciens}
2935.1  4.1     100 % (Q:100.0 %/S:100.0 %)     component of type IV secretion system (virB6) {Agrobacterium tumefaciens}
2936.1  4.1     100 % (Q:100.0 %/S:100.0 %)     component of type IV secretion system (virB7) {Agrobacterium tumefaciens}
2937.1  4.1     100 % (Q:100.0 %/S:100.0 %)     component of type IV secretion system (virB8) {Agrobacterium tumefaciens}
2938.1  4.1     100 % (Q:100.0 %/S:100.0 %)     component of type IV secretion system (virB9) {Agrobacterium tumefaciens}
2939.1  4.1     100 % (Q:100.0 %/S:100.0 %)     component of type IV secretion system (virB10) {Agrobacterium tumefaciens}
2940.1  4.1      99 % (Q:100.0 %/S:100.0 %)     component of type IV secretion system (virB11) {Agrobacterium tumefaciens}
2931.1  4.1     100 % (Q:100.0 %/S:100.0 %)     component of type IV secretion system, pilin subunit (virB2) {Agrobacterium tumefaciens}
2945.1  4.1      99 % (Q:100.0 %/S:100.0 %)     endonuclease (virD2) {Agrobacterium tumefaciens}
2953.1  4.1      99 % (Q:100.0 %/S:100.0 %)     exported virulence protein (virE2) {Agrobacterium tumefaciens}
2952.1  4.1     100 % (Q:100.0 %/S:100.0 %)     protein secretion chaperone (virE1) {Agrobacterium tumefaciens SAKURA}
2944.1  4.1     100 % (Q:100.0 %/S:100.0 %)     virA/G regulated protein (virD1) {Agrobacterium tumefaciens}
2947.1  4.1      99 % (Q:100.0 %/S:100.0 %)     virA/G regulated protein (virD4) {Agrobacterium tumefaciens}

17.6. VIRULENCE/ATTACHMENT (27 genes)

3865.1  3.1     100 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein (attF) {Agrobacterium tumefaciens}
3869.1  3.1     100 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [mannopine] (attB) {Agrobacterium tumefaciens}
3870.1  3.1     100 % (Q:100.0 %/S:100.0 %)     ABC transporter, membrane spanning protein [mannopine] (attA2) {Agrobacterium tumefaciens}
3866.1  3.1     100 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein (attE) {Agrobacterium tumefaciens}
3871.1  3.1      99 % (Q: 91.1 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein[putrescine] (attA1) {Agrobacterium tumefaciens}
3868.1  3.1     100 % (Q: 94.2 %/S:100.0 %)     ABC transporter, substrate binding protein [mannopine] (attC) {Agrobacterium tumefaciens}
3848.1  3.1     100 % (Q:100.0 %/S:100.0 %)     acetyltransferase (attX) {Agrobacterium tumefaciens}
3859.1  3.1     100 % (Q:100.0 %/S:100.0 %)     alcohol dehydrogenase (attL) {Agrobacterium tumefaciens}
3867.1  3.1      97 % (Q:100.0 %/S:100.0 %)     attachment protein (attD) {Agrobacterium tumefaciens}
1878.1  1.1      64 % (Q:100.0 %/S:100.0 %)     AttS protein (attS) {Agrobacterium tumefaciens C58}
3840.1  3.1     100 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (atsD) {Agrobacterium tumefaciens}
3844.1  3.1     100 % (Q: 94.1 %/S: 54.9 %)     conserved hypothetical protein (atsA) {Agrobacterium tumefaciens}
3849.1  3.1     100 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (attW) {Agrobacterium tumefaciens}
3855.1  3.1     100 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (attP) {Agrobacterium tumefaciens}
3862.1  3.1      99 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (attI) {Agrobacterium tumefaciens}
3863.1  3.1     100 % (Q:100.0 %/S:100.0 %)     conserved hypothetical protein (attH) {Agrobacterium tumefaciens}
3864.1  3.1      99 % (Q: 92.4 %/S: 77.8 %)     conserved hypothetical protein (attG) {Agrobacterium tumefaciens}
3847.1  3.1     100 % (Q:100.0 %/S:100.0 %)     glutathione S-transferase (attY) {Agrobacterium tumefaciens}
3850.1  3.1      98 % (Q:100.0 %/S:100.0 %)     Mg(2+) transport ATPase (attV) {Agrobacterium tumefaciens}
3860.1  3.1      99 % (Q:100.0 %/S:100.0 %)     NAD-dependent succinate aldehyde dehydrogenases (attK) {Agrobacterium tumefaciens}
3841.1  3.1     100 % (Q:100.0 %/S: 97.6 %)     short chain dehydrogenase dehydrogenases (atsC) {Agrobacterium tumefaciens}
3854.1  3.1      99 % (Q:100.0 %/S: 94.5 %)     transacetylase (attR) {Agrobacterium tumefaciens}
3861.1  3.1     100 % (Q:100.0 %/S:100.0 %)     transcription regulator, IclR family (attJ) {Agrobacterium tumefaciens C58}
3846.1  3.1     100 % (Q:100.0 %/S:100.0 %)     transcriptional regulator (attZ) {Agrobacterium tumefaciens}
3856.1  3.1      99 % (Q:100.0 %/S: 73.4 %)     transcriptional regulator, AraC family (attO) {Agrobacterium tumefaciens}
3872.1  3.1     100 % (Q:100.0 %/S:100.0 %)     transcriptional regulator, GntR family (atrA) {Agrobacterium tumefaciens}
3858.1  3.1     100 % (Q:100.0 %/S:100.0 %)     Zn-dependent hydrolases (attM) {Agrobacterium tumefaciens C58}

17.7. VIRULENCE/EXTRACELLULAR POLYSACCHARIDES (3 genes)

3279.1  1.1      67 % (Q: 99.5 %/S: 98.1 %)     beta (1-->2) glucan biosynthesis protein (chvB) {Rhizobium meliloti}
3278.1  1.1      99 % (Q: 98.3 %/S:100.0 %)     beta (1-->2) glucan export ATP-binding protein (chvA) {Agrobacterium tumefaciens}
4147.1  2.1      99 % (Q: 95.6 %/S:100.0 %)     phosphoglucomutase (pgm/exoC) {Agrobacterium tumefaciens}

17.8. VIRULENCE/PHYTOHORMONES (13 genes)

2964.1  4.1     100 % (Q:100.0 %/S:100.0 %)     5 protein (gene5) {Agrobacterium tumefaciens}
2965.1  4.1     100 % (Q: 97.6 %/S:100.0 %)     C protein (geneC) {Agrobacterium tumefaciens C58}
2966.1  4.1     100 % (Q:100.0 %/S:100.0 %)     C' protein (rolB) {Agrobacterium tumefaciens C58}
2967.1  4.1     100 % (Q: 99.6 %/S:100.0 %)     D protein (geneD) {Agrobacterium tumefaciens C58}
2968.1  4.1     100 % (Q:100.0 %/S:100.0 %)     E protein (geneE) {Agrobacterium tumefaciens C58}
2972.1  4.1     100 % (Q:100.0 %/S: 78.3 %)     gene 5 protein (gene5) {Agrobacterium tumefaciens C58}
2973.1  4.1     100 % (Q:100.0 %/S:100.0 %)     indole acetamide hydrolase (tms2) {Agrobacterium tumefaciens C58}
2975.1  4.1     100 % (Q:100.0 %/S:100.0 %)     isopentenyl transferase (ipt) {Agrobacterium tumefaciens}
2969.1  4.1      75 % (Q: 81.3 %/S: 21.7 %)     isopentyladenosine phosphotransferase (ipt) {Agrobacterium vitis}
2976.1  4.1     100 % (Q:100.0 %/S:100.0 %)     protein 6a (gene6a) {Agrobacterium tumefaciens C58}
2977.1  4.1      99 % (Q:100.0 %/S:100.0 %)     protein 6b (gene6b) {Agrobacterium tumefaciens C58}
2928.1  4.1     100 % (Q:100.0 %/S:100.0 %)     trans-zeatin secretion protein (tzs) {Agrobacterium tumefaciens C58}
2974.1  4.1      99 % (Q:100.0 %/S:100.0 %)     tryptophan 2-monooxygenase (tms1) {Agrobacterium tumefaciens C58}

17.9. VIRULENCE/HOST CELL WALL DEGRADATION (4 genes)

2387.1  1.1      58 % (Q: 99.5 %/S: 88.7 %)     lignin degradation protein (ligE) {Agrobacterium tumefaciens SAKURA}
4606.1  2.1      51 % (Q: 87.6 %/S: 74.2 %)     pectin degradation protein (kdgF) {Bacillus halodurans}
2674.1  2.1      29 % (Q: 78.0 %/S: 57.2 %)     polygalacturonase (xxxX) {Arabidopsis thaliana}
4590.1  2.1      91 % (Q: 57.1 %/S: 94.6 %)     polygalacturonase-like protein (picA) {Agrobacterium tumefaciens}

17.99. VIRULENCE/OTHER (26 genes)

2788.1  1.1      99 % (Q:100.0 %/S:100.0 %)     ABC transporter, nucleotide binding/ATPase protein (chvD) {Mycobacterium tuberculosis}
3183.1  1.1      99 % (Q:100.0 %/S:100.0 %)     agrobacterium chromosomal virulence protein B (acvB) {Agrobacterium tumefaciens}
4241.1  1.1     100 % (Q:100.0 %/S:100.0 %)     elongation factor P (chvH) {Zymomonas mobilis}
2922.1  4.1     100 % (Q:100.0 %/S:100.0 %)     exported virulence protein (virF) {Agrobacterium tumefaciens}
2068.1  2.1      22 % (Q: 90.0 %/S: 31.0 %)     fibrinogen binding protein (xxxX) {Escherichia coli}
2410.1  2.1      34 % (Q:102.5 %/S: 71.6 %)     ice nucleation protein homolog {}
2413.1  2.1      34 % (Q:106.1 %/S: 42.3 %)     ice nucleation protein homolog (ina) {Rhodobacter capsulatus}
4077.1  2.1      32 % (Q: 94.3 %/S: 99.3 %)     IcmF (icmF) {Legionella pneumophila}
2500.1  2.1      27 % (Q: 83.3 %/S: 56.3 %)     invasion (ialB) {Bartonella bacilliformis}
1336.1  1.1      56 % (Q: 94.3 %/S: 85.0 %)     invasion associated locus B (ialB) {Bradyrhizobium japonicum}
3314.1  1.1      68 % (Q: 97.6 %/S: 96.0 %)     invasion protein A (ialA) {Bartonella bacilliformis}
2918.1  4.1     100 % (Q:100.0 %/S:100.0 %)     P-450 monooxygenase (virH1) {Agrobacterium tumefaciens}
2919.1  4.1     100 % (Q:100.0 %/S:100.0 %)     P-450 monoxygenase (virH2) {Agrobacterium tumefaciens}
1011.1  1.1      95 % (Q:100.0 %/S:100.0 %)     two component response regulator (chvI) {Agrobacterium tumefaciens}
2941.1  4.1     100 % (Q:100.0 %/S:100.0 %)     two component response regulator (virG) {Agrobacterium tumefaciens}
1010.1  1.1      81 % (Q: 95.6 %/S: 98.8 %)     two component sensor kinase (chvG) {Agrobacterium tumefaciens}
2929.1  4.1     100 % (Q:100.0 %/S:100.0 %)     two component sensor kinase (virA) {Agrobacterium tumefaciens}
2924.1  4.1     100 % (Q:100.0 %/S:100.0 %)     virA/G regulated gene (virK) {Agrobacterium tumefaciens C58}
2942.1  4.1     100 % (Q:100.0 %/S:100.0 %)     virA/G regulated protein (virC2) {Agrobacterium tumefaciens}
2943.1  4.1     100 % (Q:100.0 %/S:100.0 %)     virA/G regulated protein (virC1) {Agrobacterium tumefaciens}
2946.1  4.1      99 % (Q:100.0 %/S:100.0 %)     virA/G regulated protein (virD3) {Agrobacterium tumefaciens}
2948.1  4.1      99 % (Q:100.0 %/S: 95.7 %)     virA/G regulated protein (virD5) {Agrobacterium tumefaciens}
2949.1  4.1      69 % (Q: 64.4 %/S: 26.8 %)     virA/G regulated protein (virE3) {Agrobacterium tumefaciens}
2950.1  4.1     100 % (Q:100.0 %/S:100.0 %)     virA/G regulated protein (virH) {Agrobacterium tumefaciens}
2951.1  4.1     100 % (Q:100.0 %/S:100.0 %)     virA/G regulated protein (virE0) {Agrobacterium tumefaciens}
2954.1  4.1      99 % (Q: 97.7 %/S:100.0 %)     virA/G regulated protein (virE3) {Agrobacterium tumefaciens}

18.99. UNDEFINED/OTHER (7 genes)

3852.1  3.1     100 % (Q:100.0 %/S:100.0 %)     acetyltransferase (attT) {Agrobacterium tumefaciens}
2723.1  1.1      81 % (Q: 97.7 %/S: 97.0 %)     apaG protein (apaG) {Rhizobium etli}
3414.1  2.1      32 % (Q: 54.5 %/S: 47.9 %)     gene fusion (xxxX) {Actinobacillus actinomycetemcomitans}
738.1   1.1      67 % (Q: 98.6 %/S: 97.9 %)     HIT family protein (xxxX) {Pseudomonas aeruginosa}
4537.1  2.1      55 % (Q: 96.9 %/S: 95.0 %)     resiniferatoxin-binding, phosphotriesterase-related protein (xxxX) {Mesorhizobium loti}
4061.1  2.1      31 % (Q: 98.4 %/S:103.6 %)     VgrG protein {}
4375.1  2.1      31 % (Q:101.6 %/S: 98.8 %)     vgrG protein (vgrG) {Escherichia coli}