Transport Proteins in Agrobacterium tumefaciens strain C58

ATP-dependent

ABC Superfamily
Proteins Probable Substrate
ATP-binding membrane spanning substrate binding  
Atu2242/Atu2241 - - efflux?
- Atu2304* - SbmA homologue
Atu1064 - - heavy metal?
- Atu3370 Atu3368 mannitol?
Atu1520 Atu1519 Atu1521 zinc
Atu1410/Atu1411 Atu1412 Atu1413 branched-chain amino acid
Atu6074 Atu6075 Atu6073 oligopeptide
- Atu0129 - sugar
Atu3377 Atu3378/Atu3379 Atu3375 oligopeptide
Atu3382/Atu3383 - - rhizobicin
Atu3412 Atu3410/Atu3411 Atu3409 dipeptide
Atu3417 - Atu3415/Atu3416 amino acid?
Atu1907 Atu1906 - efflux?
- Atu1738* - multidrug efflux?
Atu4578 Atu4579 Atu4577 iron (III)?
Atu4578 - - spermidine/putrescine
Atu0423 Atu0422/Atu0421 Atu0420 phosphate
Atu2125 - - drug efflux?
Atu0168 Atu0171/Atu0172 - phosphonate
Atu2012 Atu2013 Atu2014 iron (III)?
Atu3236 Atu3237/Atu3238 Atu3239 sugar
Atu0127 Atu0128 - sugar
- Atu4688/Atu2413 Atu4687 amino acid
Atu3215/Atu3216 Atu3213/Atu3214 Atu3212 oligopeptide
Atu3236 Atu3237/Atu3238 Atu3239 sugar
Atu2728 - - beta-(1-->2)glucan
Atu4681 Atu4680/Atu4679 Atu4678 glutamine
Atu4667 Atu4668 - ?
Atu4664 Atu4663/Atu4662 Atu4661 oligopeptide
Atu3802 Atu3801 Atu3800 glycine betaine/L-proline
Atu4600 - - lipid?
Atu4621/Atu4620 Atu4622 - oligopeptide
Atu3903 Atu3904 Atu3905/Atu3906 nitrate
Atu4256 Atu4258/Atu4257 Atu4259 oligopeptide
Atu4261 Atu4260 - nitrate?
Atu5068 Atu5070/Atu5069 Atu5071 dipeptide
Atu4445 Atu4446 Atu4447 sorbitol
Atu4413 Atu4414 - rhizobiocin
Atu4089/Atu4090 - - ?
Atu4116/Atu4117 Atu4114/Atu4115 Atu4113 dipeptide
Atu2577 - - efflux?
Atu2586 Atu2588/Atu2589 Atu2587 dipeptide
Atu6141 Atu6142 - oligopeptide
Atu3371 - - sugar
Atu3744 - - multidrug efflux?
Atu3053 Atu3047/Atu3048 Atu3049 oligopeptide
Atu4786 Atu4785 Atu4784/Atu4783 iron (III)
Atu4729/Atu4728 - - drug efflux?
Atu4723 - - dipeptide?
Atu2411 Atu2412 - branched chain amino acid
Atu2705 Atu2706? - ?
Atu2712 Atu2713 Atu2714 thiamine?
Atu3180 - - ?
- - Atu6139 oligopeptide
Atu4516/Atu4515 Atu4518/Atu4517 Atu4519 branched-chain amino acid
Atu6087 Atu6086 Atu6085 aliphatic sulfonate
- - Atu2229 amino acid
Atu0065 Atu0064 Atu0063 sugar
Atu2366 Atu2363/Atu2364 Atu2365 amino acid
Atu2388 Atu2389/Atu2390 - sulfate
Atu3956 Atu3954/Atu3955 Atu3957 glycine betaine/l-proline
Atu3970 Atu3968/Atu3969 Atu3967/Atu3487 sugar
Atu3457 Atu3459/Atu3458 - peptide
Atu1792 Atu1790/Atu1791 - sugar
Atu1816 - - ?
Atu6140 - - oligopeptide
Atu1823/Atu1824 - - ?
Atu0751 Atu0750 - cobalt?
Atu1391 Atu1389/Atu1390 Atu1388 amino acid
Atu1396 Atu1397/Atu1398 Atu1399 glutamine?
Atu1401 Atu1402/Atu1403 Atu1404 sugar
Atu0893 Atu0894 Atu0895 glycine betaine/L-proline
Atu6074 Atu6076/Atu6075 Atu6073 oligopeptide
Atu6069 Atu6068 Atu6070 D-ribose
Atu3456 - Atu3455 oligopeptide
- - Atu3444/Atu3442 oligopeptide
Atu3437/Atu3436 Atu3435/Atu3434 Atu3433 oligopeptide
Atu5400 Atu5402/Atu5401 - sugar
Atu5178 - - amino acid?
Atu1047 Atu1048 Atu1049/Atu1046 nitrate?
Atu4450 Atu4448/Atu4449 - sorbitol/mannitol?
Atu4470 Atu4468/Atu4469 Atu4471 manganese
Atu4487 Atu4488 - amino acid
- - Atu1838 amino acid
- Atu3372 rhizopine
Atu3388 Atu3389 Atu3390/Atu3391 iron (III)
- Atu3394/Atu3395 Atu3396 iron (III)
Atu0823 Atu0821/Atu0822 Atu0820 sulfate
Atu5462 Atu5461/Atu5460 Atu5459 sugar
Atu5452 Atu5453 - ?
- - Atu5441 oligopeptide
Atu0850 - - ?
Atu2819 Atu2818 Atu2817 ribose
Atu1898 Atu1900 Atu1899 ribose
- - Atu1884 aliphatic sulfonate
- Atu1881/Atu1880 Atu1879 amino acid
Atu3322 - - ?
Atu3341 Atu3339/Atu3340 Atu3338 sugar
Atu3349 Atu3350/Atu3351 Atu3352 sugar
- Atu4720/Atu4721 Atu4719 dipeptide
Atu3360 Atu3358/Atu3359 Atu3357 glutamine
Atu6028 Atu6026/Atu6025 Atu6027 amino acid
Atu0333 - - ?
Atu0308 Atu0307/Atu0306 Atu0305 glycerol-3-phosphate
Atu0595 Atu0592/Atu0593 Atu0591 alpha-glucosides
Atu0610 Atu0611/Atu0612 Atu0609 spermidine/putrescine
- Atu0613 - iron (III)
Atu5480 Atu5481 Atu5482 glutamine
Atu4598 - - sulfate?
Atu5521/Atu5525 Atu5523/Atu5524 - branched chain amino acid
Atu5534/Atu5535 Atu5532/Atu5533 Atu5531 urea/short chain-amide
Atu1118 Atu1125 - branched-chain amino acid
Atu5347 Atu5346/Atu5345 Atu5343 oligopeptide
- Atu3286 - nitrate
Atu3281 Atu3284/Atu3283 Atu3282 sugar
- Atu3268/Atu3267 Atu3269 dipeptide
Atu3536 Atu3534/Atu3535 Atu3533 ribose
Atu3574 Atu3575 Atu3576 xylose
- - Atu1774 peptide
- - Atu5237 amino acid
- Atu4597 - nitrate
Atu4569 Atu4571/Atu4570 Atu4568 spermidine/putrescine?
Atu4559 Atu4558/Atu4557 Atu4564 sugar
- - Atu4552/Atu4551 rhizopine
Atu4533 Atu4537/Atu4536 Atu4535/Atu4534 amino acid
Atu4526 Atu4524/Atu4523 Atu4525 oligopeptide
Atu0406 Atu0408 Atu0407 iron (III)
- - Atu5403 sugar
Atu0391 Atu0393/Atu0392 Atu0394 sugar
- Atu2143 - amino acid
Atu2150 Atu2148/Atu2149 Atu2147 spermidine/putrescine
Atu5410 Atu5408 Atu5409/Atu5411 spermidine/putrescine
Atu2153 - - ?
Atu5248 Atu5246/Atu5247 Atu5249 spermidine/putrescine
Atu5256/Atu5257 Atu5254/Atu5255 Atu5253 oligopeptide
Atu0159 Atu5412/Atu5413/Atu0158 - putrescine
- Atu5263/Atu5264 Atu5265 sugar
Atu5316 Atu5314/Atu5315 Atu5312 iron (III)
- Atu6143 - agrocinopine
- Atu0171/Atu0172 - phosphonate
Atu3188 Atu3186/Atu3187 - glycerol-3-phosphate
Atu3200 Atu3199 Atu3198 D-ribose
Atu3223 Atu3224/Atu3225 Atu3222 D-ribose
- - Atu3245/Atu3246 amino acid
Atu2458 Atu2459 Atu2460 hemin
- - Atu2467 iron (III)
Atu1646 - - amino acid?
Atu2476 Atu2474/Atu2475 Atu2473 iron (III)
Atu2508 Atu2506/Atu2507 Atu2505 sugar
Atu2514/Atu2515 Atu2516/Atu2517 Atu2518 oligopeptide
Atu2279 Atu2280 Atu2276/Atu2281 proline/glycine betaine
Atu2424/Atu2425 Atu2426/Atu2427 Atu2422 branched-chainamino acid
Atu2347 Atu2346 Atu2348 L-arabinose
Atu4650 Atu4653/Atu4652 Atu4654 sugar
Atu4621/Atu4620 Atu4623/Atu4622 Atu4626 dipeptide
Atu1580 Atu1578/Atu1579 Atu1577 amino acid
Atu2410 - - branched-chain amino acid
- - Atu0249 dicarboxylates?
- - Atu0202 iron (III)
Atu0197 Atu0198/Atu0196 Atu0199 proline/glycine/betaine
Atu0190 Atu0189/Atu0188 Atu0187 peptide
Atu0177/Atu0176/Atu0174 - Atu0173 phosphonate
Atu3818 Atu3819/Atu3820 Atu3821 ribose
Atu3863 - - ?
Atu3869 - - ?
Atu3880 Atu3879 Atu3881 ribose
Atu3895/Atu3896 Atu3893/Atu3894 - sugar
Atu4283 Atu4282/Atu4281 Atu4284 amino acid
Atu4261 Atu4260 Atu4262 taurine?
Atu4249 Atu4251/Atu4250 Atu4252 sugar
Atu4246 Atu4245/Atu4244 Atu4243 spermidine/putrescine?
Atu4235 Atu4234 Atu4233 glutamine
Atu1290 Atu1289 - amino acid?
Atu4211 Atu4210/Atu4209 Atu4208 maltose
Atu4195 Atu4194/Atu4193 Atu4192 dipeptide
Atu5131/Atu5126 Atu5132?/Atu5128/Atu5127 Atu5129 spermidine/putrescine?
Atu5083 Atu5081/Atu5080 /Atu5079 lactose
Atu5062 Atu5060/Atu5059 Atu5058 glycerol-3-phosphate
Atu4435 Atu4440/Atu4439 Atu4438 dipeptide
Atu4434 Atu4433/Atu4432 Atu4431 oligopeptide
Atu4424 Atu4423/Atu4422 Atu4421 spermidine/putrescine
Atu4403 Atu4402 - taurine
Atu4370 Atu4372/Atu4371 Atu4369 ribose
Atu4358 Atu4360/Atu4359 Atu4361 maltose?
Atu4321 Atu4322 Atu4320 ribose
- Atu4316 - efflux?
Atu4032 Atu4030/Atu4031 Atu4033 ribose
Atu4044 Atu4045 Atu4046 glycine betaine/L-proline
Atu4124/Atu4125 Atu4126/Atu4127 Atu4123 branched-chain amino acid
Atu4156 Atu4155 Atu4154 aliphatic sulfonate
Atu2563 Atu2562 Atu2561 molybdenum
Atu2600 Atu2602/Atu2603 Atu2601 maltose?
Atu2670 Atu2671 - sugar?
Atu2680 - - ?
Atu2686 Atu2687/Atu2688 - heme
Atu3691 Atu3688/Atu3689 Atu3690 iron(III) dicitrate
Atu5005 - Atu5006 glutamine
Atu2060 - - amino acid?
Atu3021 Atu3022/Atu3023 Atu3024 sugar
Atu3038 Atu3036/Atu3037 Atu3041 dipeptide
Atu3060/Atu3063/Atu3064 Atu3065 - ribose
Atu3089 Atu3086/Atu3087 Atu3088 spermidine/putrescine
Atu3099 Atu3097/Atu3098 Atu3096 glycerol-3-phosphate
Atu3103/Atu3106 Atu3100/Atu3101 Atu3102 sugar
Atu3111 Atu3112/Atu3113 Atu3114 lactose
Atu3131 Atu3132/Atu3133 Atu3130 sugar
- Atu2079 - efflux?
Atu3148 Atu3149/Atu3150 Atu3151 lactose
Atu4843 Atu4845/Atu4844 Atu4842 ribose?
Atu4752 Atu4754/Atu4753 Atu4755 amino acid
Atu4745 Atu4747/Atu4746 Atu4744 sugar
Atu3488 Atu3489/Atu3490 - ribose
Atu3501 Atu3502/Atu3503 Atu3504 sulfate
- - Atu0157 ?
Atu6058 Atu6057 Atu6059 nitrate?sulfonate?
- Atu0708* - nitrate
- - Atu0479 amino acid
Atu5423 Atu5422/Atu5421 Atu5420 spermidine/putrescine
Atu5218/Atu5220 Atu5219 - glycine betaine/proline
Atu5236 Atu5234/Atu5235 - amino acid
Atu4025 Atu4024 Atu4023 iron (III)
Atu2705 - - ?
Atu2712/Atu2716 Atu2713 Atu2714 thiamine
- - Atu2414 urea/short-chain amide
Atu3170 Atu3168/Atu3169 Atu3165 sorbitol/mannitol
Atu3171 Atu3172/Atu3173 Atu3174 suger
Atu3180 Atu3179 Atu3178 manganese?
- - Atu3185 glycerol-3-phosphate
Atu4690 Atu4689 - amino acid
Atu4700/Atu4701 Atu4696/Atu4697 Atu4695 peptide
Atu1201/Atu1200 Atu1199/Atu1198 Atu1202 oligopeptide
*contains both an ATP binding and a membrane spanning domain as one polypeptide
F-Type ATPase
protein probable substrate
Atu2621/Atu2622/Atu2623/Atu2624/Atu2625/Atu0717/Atu0716/Atu0715/Atu0714/Atu0713 protons
P-Type ATPase
protein probable substrate
Atu1528 cation
Atu0926 glycine betaine?
Atu0843 zinc?
Atu0937 copper?
Atu1195 copper
Atu3788/Atu3789/Atu3790 potassium
ArsAB family
protein probable substrate
Atu3544 arsenite efflux

Secondary Transporters

 
MFS
protein probable substrate
Atu1170 efflux?
Atu5200 aromatic efflux?
Atu4479 multidrug efflux?
Atu4292 efflux
Atu2259 sugar?
Atu2492 sugar
Atu3804 sugar?
Atu3741 ?
Atu2154 proline/betaine
Atu2090 metabolite
Atu2361 drug efflux
Atu1173 efflux
Atu1459 drug efflux?
Atu5395 metabolite?
Atu0621 multidrug efflux
Atu1040 oxalate/formate?
Atu1855 drug efflux?
Atu1152 multidrug efflux?
Atu3984 macrolide efflux?
Atu3988 efflux
Atu2134 ?
Atu2154 proline/betaine
Atu3192 oxalate/formate?
Atu2525 benzoate
Atu2305 drug efflux?
Atu3830 sugar
Atu1300 multidrug efflux
Atu1086 multidrug efflux?
Atu1697 efflux?
Atu4326 proline/betaine
Atu4500 sugar?
Atu2594 sugar?
Atu2659 macrolide?
Atu2666 multidrug efflux?
Atu3741 multidrug efflux?
Atu0960 efflux?
Atu0838 efflux?
Atu0143 sugar
Atu4017 dicarboxylic acid
Atu0942 multidrug efflux?
Atu0091 ?
Atu2708 tartrate?
Atu2724 nitrate?
Atu1000 efflux
Atu4710 oxalate/formate
Atu4206 tetracycline efflux
Atu3154 nitrite?
APC family
protein probable substrate
Atu3792 aromatic amino acid
CDF family
protein probable substrate
Atu0991 cation
Atu0891 cation
Atu2274 cation
RND family
protein probable substrate
Atu5381 multidrug efflux
Atu3274 efflux
Atu2054 multidrug efflux
Atu3202 multidrug efflux
Atu2483 multidrug efflux
Atu4636 efflux
Atu4219 cation efflux
Atu2551 multidrug efflux
Atu2393 cation efflux
Atu3795 multidrug efflux
SMR family
protein probable substrate
Atu2319 multidrug efflux
CaCA family
protein probable substrate
Atu2195 calcium/proton
PiT family
protein probable substrate
Atu0658 phosphate
Atu4633 phosphate
DAACS family
protein probable substrate
Atu0804 sodium/dicarboxylate
Atu3298 C4-dicarboxylate
BASS family
protein probable substrate
Atu4588 sodium/bile acid
CPA1 family
protein probable substrate
Atu3059 sodium/hydrogen
Atu3738 sodium/hydrogen
CPA2 family
protein probable substrate
Atu1693 potassium ion
Atu0692 potassium ion
Trk family
protein probable substrate
Atu1449 potassium ion
Atu1204 potassium ion
NCS2 family
protein probable substrate
Atu3076 uracil
BenE family
protein probable substrate
Atu2265 benzoate
DASS family
protein probable substrate
Atu4475 sodium/sulfate
Amt family
protein probable substrate
Atu2758 ammonium
CHR family
protein probable substrate
Atu3079 chromate
SulP family
protein probable substrate
Atu1539 sulfate
Atu1156 sulfate
Nramp family
protein probable substrate
Atu1736 manganese
TRAP-T family
protein probable substrate
Atu3262/Atu3261/Atu3260 C4-dicarboxylate
Atu3253/Atu3254/Atu3255 C4-dicarboxylate
Atu3135/Atu3136/Atu3137 C4-dicarboxylate
Atu3156/Atu3157/Atu3158 C4-dicarboxylate
Atu4827/Atu4826 C4-dicarboxylate
Atu2743/Atu2744 C4-dicarboxylate
PNaS family
protein probable substrate
Atu2245 phosphate/sodium
Atu6136 phosphate/sodium
ACR3 family
protein probable substrate
Atu1491 arsenic?
CPA3 family
protein probable substrate
Atu0909/Atu0910/Atu0911 sodium ion/proton
Atu0512/Atu0511/Atu0510/Atu0509/Atu0508/Atu0507 sodium ion/proton
Atu0912/Atu0913/Atu0914/Atu0915 sodium ion/proton
MATE family
protein probable substrate
Atu5428 efflux?
Atu2172 multidrug efflux
Atu3669 efflux
Tat family
protein probable substrate
Atu1706/Atu1705/Atu1704 protein secretion
AEC family
protein probable substrate
Atu0080 malonate?
Atu1795 malonate?
KUP family
protein probable substrate
Atu5466 potassium
Atu0711 potassium
LysE family
protein probable substrate
Atu0927 lysine efflux
Atu5358 amino acid efflux
Atu2669 amino acid efflux
RhtB family
protein probable substrate
Atu1170 amino acid
Atu0866 amino acid
Atu0879 amino acid
Atu1864 amino acid
Atu0313 amino acid
Atu2633 amino acid
Atu3460 amino acid
Atu4268 amino acid

Ion Channels

MIP family
protein probable substrate
Atu5361 water channel
Atu0476 glycerol
CIC family
protein probable substrate
Atu0832 chloride channel
Atu1493 chloride channel
MscL family
protein probable substrate
Atu0528 large conductance mechanosensitive channel
MscS family
protein probable substrate
Atu1541 small conductance mechanosensitive channel
Atu1633 small conductance mechanosensitive channel
Atu1050 small conductance mechanosensitive channel
Atu4298 small conductance mechanosensitive channel
Atu4304 small conductance mechanosensitive channel

Unclassified

PST family
protein probable substrate
Atu3550 exopolysaccharide
Atu4057 exopolysaccharide
Atu4807 exopolysaccharide
MgtE family
protein probable substrate
Atu0999 magnesium ion
Atu1547 magnesium ion


revised October 2001
Questions regarding transporter classifications may be sent to: Ian T. Paulsen