The paralogous families were found blasting-X all orfs
against themselves:

/home/install/blast/blastall -i agro.bb.fasta -o agro.aa.fasta.blastx -d
agro.proteins.2001-07-15 -p blastx -F F -e 1e-5 -a 2 &
(no filtering, e-value threshold of 1e-5 using 2 processors)

For each orf, all the alignments with:

* e-value lower than e-5
* query and subject coverage greater than 60%

makes the query and the subject a cluster.

If there are multiple alignments, we search at least one with
the above criteria. If there isn't one, query and subjects are not
clustered together.

Finally, one greedy program analyzes the clusters generated by the
blast and solves the transitivity of clusters (e.g., if orfs A and
B aligns well and B and C too, so A, B, and C form a cluster).

The below list presents family by family, with decreasing family
size (the first family listed is the largest one). For each orf in
a family, you find the orf Id (with link to editor), the replicon ID,
the primary category, the product name and the gene name
(only families with more than 1 member are listed).

Family 3540

Atu4598     - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu6141     - [4.1][8.1] ABC transporter, nucleotide binding/ATPase protein [agrocinopine] (accC)
Atu3371     - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu2411     - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein [urea/amide] (xxxX)
Atu1064    - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu0850    - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu6028    - [4.1][8.1] ABC transporter, nucleotide binding/ATPase protein [nopaline] (nocP)
Atu5410    - [3.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu0159    - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu0127    - [1.1][8.5] ABC transporter, nucleotide binding/ATPase protein [sugar/ribonucleotide] (xxxX)
Atu2424    - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu2425    - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3802    - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [proline/glycine betaine] (proV)
Atu2410    - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein [urea/amide] (xxxX)
Atu1290    - [1.1][14.4] ABC transporter, nucleotide binding/ATPase protein [lipoprotein] (lolD)
Atu5005    - [3.1][8.1] ABC transporter, nucleotide binding/ATPase protein [glutamine] (glnP/glnQ)
Atu3488    - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3501    - [2.1][8.2] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu6058    - [4.1][8.2] ABC transporter, nucleotide binding/ATPase protein [nitrate/sulfonates] (ssuB)
Atu5423    - [3.1][8.1] ABC transporter, nucleotide binding/ATPase protein [putrescine] (potG)
Atu5218    - [3.1][8.1] ABC transporter, nucleotide binding/ATPase protein [glycine betaine/L-proline] (proV)
Atu5236    - [3.1][8.1] ABC transporter, nucleotide binding/ATPase protein [amino acid] (xxxX)
Atu4025    - [2.1][8.4] ABC transporter, nucleotide binding/ATPase protein [ferrichrome] (fhuC)
Atu2705    - [1.1][14.4] ABC transporter, nucleotide binding/ATPase protein [protein] (prsD)
Atu2712    - [1.1][8.99] ABC transporter, nucleotide binding/ATPase protein [thiamine] (thiQ)
Atu2716    - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3170    - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sorbitol/mannitol] (xxxX)
Atu3171    - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu3180    - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu4690    - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [amino acid] (xxxX)
Atu4700    - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX)
Atu4701    - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX)
Atu1201    - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu1200    - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein (dppD)
Atu2242   - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu2241   - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu0065   - [1.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (frcA)
Atu2366   - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein (nocP1)
Atu2388   - [1.1][8.2] ABC transporter, nucleotide binding/ATPase protein [nitrate] (xxxX)
Atu3956   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3970   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu3457   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3606   - [2.1][14.1] cell division ATP-binding protein (ftsE)
Atu1520   - [1.1][8.4] ABC transporter, nucleotide binding/ATPase protein [zinc] (znuC)
Atu1792   - [1.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu1816   - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu1823   - [1.1][8.4] ABC transporter, nucleotide binding/ATPase protein (sufC)
Atu0751   - [1.1][8.4] ABC transporter, nucleotide binding/ATPase protein [cobalt] (xxxX)
Atu1391   - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu1396   - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu1401   - [1.1][8.3] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu1410   - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu0893   - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu6087   - [4.1][8.2] ABC transporter, nucleotide binding/ATPase protein [nitrate/sulfonate] (nrtC)
Atu6074   - [4.1][8.1] ABC transporter, nucleotide binding/ATPase protein [peptide] (dfpD)
Atu6069   - [4.1][8.3] ABC transporter, nucleotide binding/ATPase protein [ribose] (rbsA)
Atu3456   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3437   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX)
Atu3436   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX)
Atu5400   - [3.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu1047   - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu4450   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu4470   - [2.1][8.4] ABC transporter, nucleotide binding/ATPase protein [iron] (sitB)
Atu4487   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3377   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [peptide] (xxxX)
Atu3383   - [2.1][14.4] rhiziobicin secretion (prsD)
Atu3388   - [2.1][8.4] ABC transporter, nucleotide binding/ATPase protein [iron] (fecE)
Atu3394   - [2.1][8.4] ABC transporter, nucleotide binding/ATPase protein [iron] (fecE)
Atu3412   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3417   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxx)
Atu0823   - [1.1][8.2] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu5462   - [3.1][8.3] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu5452   - [3.1][8.7] ABC transporter, nucleotide binding/ATPase protein (attE)
Atu2819   - [1.1][8.3] ABC transporter, nucleotide binding/ATPase protein [ribose] (rbsA)
Atu1907   - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu1898   - [1.1][8.3] ABC transporter, nucleotide binding/ATPase protein [ribose] (rbsA)
Atu3322   - [2.1][8.99] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3341   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [trehalose/maltose] (thuK)
Atu3349   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3360   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [amino acid] (xxxX)
Atu0333   - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu0308   - [1.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sn-Glycerol-3-phosphate] (ugpC)
Atu0595   - [1.1][8.3] ABC transporter, nucleotide binding/ATPase protein (aglK)
Atu0610   - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein (potG)
Atu5480   - [3.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu5521   - [3.1][8.1] ABC transporter, nucleotide binding/ATPase protein [branched chain amino acid] (xxxX)
Atu5525   - [3.1][8.1] ABC transporter, nucleotide binding/ATPase protein [branched chain amino acid] (xxxX)
Atu5534   - [3.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu5535   - [3.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu1118   - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu5347   - [3.1][8.1] ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX)
Atu3281   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3262   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [C4-dicarboxylate] (xxxX)
Atu3536   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3574   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [xylose] (xylG)
Atu1738   - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu4578   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu4569   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu4559   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu4533   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [amino acid] (xxxX)
Atu4526   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu4516   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [branched chain amino acid] (livG)
Atu4515   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [branched chain amino acid] (livF)
Atu0423   - [1.1][8.2] ABC transporter, nucleotide binding/ATPase protein (pstB)
Atu0406   - [1.1][8.4] ABC transporter, nucleotide binding/ATPase protein (fbpA1)
Atu0391   - [1.1][8.3] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu2125   - [1.1][17.99] ABC transporter, nucleotide binding/ATPase protein (chvD)
Atu2150   - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu5248   - [3.1][8.1] ABC transporter, nucleotide binding/ATPase protein [spermidine/putrescine] (potA)
Atu5256   - [3.1][8.1] ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX)
Atu5257   - [3.1][8.1] ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX)
Atu5316   - [3.1][8.4] ABC transporter, nucleotide binding/ATPase protein [iron-siderophore] (fepC)
Atu2012   - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3188   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [glycerol-3-phosphate] (ugpC)
Atu3200   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [ribose] (xxxX)
Atu3215   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX)
Atu3216   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX)
Atu3223   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [ribose] (xxxX)
Atu3236   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu2458   - [1.1][8.4] ABC transporter, nucleotide binding/ATPase protein [hemin] (hmuV)
Atu2476   - [1.1][8.4] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu2508   - [1.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu2514   - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein [dipeptide] (dppF)
Atu2515   - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein [dipeptide] (dppD)
Atu2279   - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein [proline/glycine betaine] (xxxX)
Atu2347   - [1.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (gguA)
Atu2728   - [1.1][17.7] beta (1-->2) glucan export ATP-binding protein (chvA)
Atu4681   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [amino acid] (xxxX)
Atu4667   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu4664   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX)
Atu4650   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu4621   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [dipeptide] (dppD)
Atu4620   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [dipeptide] (dppF)
Atu4600   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu1580   - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein [amino acid] (xxxX)
Atu1646   - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu0197   - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein [proline/glycine/betaine] (xxxX)
Atu0190   - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein [peptide] (xxxX)
Atu0177   - [1.1][8.99] ABC transporter, nucleotide binding/ATPase protein [phosphonate] (phnK)
Atu0176   - [1.1][8.99] ABC transporter, nucleotide binding/ATPase protein [phosphonate] (phnL)
Atu0174   - [1.1][8.2] ABC transporter, nucleotide binding/ATPase protein [phosphonate] (phnC)
Atu3818   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [ribose] (rbsA)
Atu3863   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3869   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3880   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu3895   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu3896   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu3903   - [2.1][8.2] ABC transporter, nucleotide binding/ATPase protein [nitrate] (nrtC)
Atu4283   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu4261   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu4256   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX)
Atu4249   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugars] (xxxX)
Atu4246   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [polyamine] (xxxX)
Atu4235   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [amino acid] (xxxX)
Atu4211   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu4195   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX)
Atu5131   - [3.1][17.6] ABC transporter, nucleotide binding/ATPase protein (attE)
Atu5126   - [3.1][17.6] ABC transporter, nucleotide binding/ATPase protein[putrescine] (attA1)
Atu5083   - [3.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu5068   - [3.1][8.1] ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX)
Atu5062   - [3.1][8.3] ABC transporter, nucleotide binding/ATPase protein [glycerol-3-phosphate] (ugpC)
Atu4445   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (moaD)
Atu4435   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX)
Atu4434   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX)
Atu4424   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [spermidine/putrescine] (xxxX)
Atu4413   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [bacteriocin] (rspD)
Atu4403   - [2.1][8.2] ABC transporter, nucleotide binding/ATPase protein [anion] (xxxX)
Atu4370   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu4358   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu4321   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [ribose] (rbsA)
Atu4032   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu4044   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [glycine betaine] (xxxX)
Atu4089   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (cydD)
Atu4090   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (cydC)
Atu4116   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [dipeptide] (dppD)
Atu4117   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [dipeptide] (dppF)
Atu4124   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [branched chain amino acid] (xxxX)
Atu4125   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [branched chain amino acid] (xxxX)
Atu4156   - [2.1][8.99] ABC transporter, nucleotide binding/ATPase protein [aliphatic sulfonate] (xxxX)
Atu2563   - [1.1][8.4] ABC transporter, nucleotide binding/ATPase protein [molybdenum] (modC)
Atu2586   - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein [oligopeptide] (xxxX)
Atu2600   - [1.1][8.3] ABC transporter, nucleotide binding/ATPase protein [maltose/maltodextrin] (malK)
Atu2670   - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu2680   - [1.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu2686   - [1.1][8.99] ABC transporter, nucleotide binding/ATPase protein [heme] (ccmA)
Atu3691   - [2.1][8.4] ABC transporter, nucleotide binding/ATPase protein [iron (III) dicitrate] (fecE)
Atu3744   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3021   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu3038   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [dipeptide] (moaD)
Atu3053   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [peptide] (xxxX)
Atu3060   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3064   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu3089   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [spermidine/putrescine] (xxxX)
Atu3099   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sn-Glycerol-3-phosphate] (ugpC)
Atu3103   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu3111   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu3131   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu3148   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu4843   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu4786   - [2.1][8.4] ABC transporter, nucleotide binding/ATPase protein [iron] (afuC)
Atu4752   - [2.1][8.1] ABC transporter, nucleotide binding/ATPase protein [amino acid] (xxxX)
Atu4745   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein [sugar] (xxxX)
Atu4729   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu4728   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (exsA)
Atu4723   - [2.1][8.7] ABC transporter, nucleotide binding/ATPase protein (moaD)
Atu6140  - [4.1][8.1] ABC transporter, nucleotide binding/ATPase protein [agrocinopine] (accb)

Family 793

Atu4688     - [2.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu6142     - [4.1][8.1] ABC transporter, membrane spanning protein [agrocinopine] (accD)
Atu4720    - [2.1][8.1] ABC transporter, membrane spanning protein [dipeptide] (dppB)
Atu4721    - [2.1][8.1] ABC transporter, membrane spanning protein [dipeptide] (dppC)
Atu6026    - [4.1][8.1] ABC transporter, membrane spanning protein [nopaline] (nocQ)
Atu6025    - [4.1][8.1] ABC transporter, membrane spanning protein [nopaline] (nocM)
Atu5408    - [3.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu5412    - [3.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu5413    - [3.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu0158    - [1.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu0172    - [1.1][8.2] ABC transporter, membrane spanning protein [phosphonate] (phnE)
Atu3801    - [2.1][8.1] ABC transporter, membrane spanning protein [proline/glycine betaine] (proW)
Atu3502    - [2.1][8.2] ABC transporter, membrane spanning protein (xxxX)
Atu3503    - [2.1][8.2] ABC transporter, membrane spanning protein (xxxX)
Atu6057    - [4.1][8.2] ABC transporter, membrane spanning protein [nitrate/sulfonates] (ssuC)
Atu5422    - [3.1][8.1] ABC transporter, membrane spanning protein [putrescine] (potI)
Atu5421    - [3.1][8.1] ABC transporter, membrane spanning protein [putrescine] (potH)
Atu5219    - [3.1][8.1] ABC transporter, membrane spanning protein [glycine betaine/L-proline] (proW)
Atu5234    - [3.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu5235    - [3.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu2713    - [1.1][8.99] ABC transporter, membrane spanning protein [thiamine] (thiP)
Atu3168    - [2.1][8.3] ABC transporter, membrane spanning protein [sorbitol/mannitol] (xxxX)
Atu3169    - [2.1][8.3] ABC transporter, membrane spanning protein [sorbitol/mannitol] (xxxX)
Atu3172    - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu3173    - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu4689    - [2.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu4696    - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu4697    - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu1199    - [1.1][8.1] ABC transporter, membrane spanning protein (dppC)
Atu1198    - [1.1][8.4] ABC transporter, membrane spanning protein (nikB)
Atu2363   - [1.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu2364   - [1.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu2389   - [1.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu2390   - [1.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu3954   - [2.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu3955   - [2.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu3968   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu3969   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu3459   - [2.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu3458   - [2.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu1389   - [1.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu1390   - [1.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu1397   - [1.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu1398   - [1.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu1402   - [1.1][8.3] ABC transporter, membrane spanning protein (xxxX)
Atu1403   - [1.1][8.3] ABC transporter, membrane spanning protein (xxxX)
Atu0894   - [1.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu6086   - [4.1][8.2] ABC transporter, membrane spanning protein [nitrate/sulfonate] (nrtB)
Atu6076   - [4.1][8.1] ABC transporter, membrane spanning protein [peptide] (DfpB)
Atu6075   - [4.1][8.1] ABC transporter, membrane spanning protein [peptide] (dfpC)
Atu3435   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu3434   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu5402   - [3.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu5401   - [3.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu1048   - [1.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu4448   - [2.1][8.3] ABC transporter, membrane spanning protein [sorbitol/mannitol] (xxxX)
Atu4449   - [2.1][8.3] ABC transporter, membrane spanning protein [sorbitol/mannitol] (xxxX)
Atu4488   - [2.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu3378   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu3379   - [2.1][8.1] ABC transporter, membrane spanning protein [peptide] (dppB)
Atu3410   - [2.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu3411   - [2.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu0821   - [1.1][8.2] ABC transporter, membrane spanning protein (cysT)
Atu0822   - [1.1][8.2] ABC transporter, membrane spanning protein (xxxX)
Atu5461   - [3.1][8.3] ABC transporter, membrane spanning protein (xxxX)
Atu5460   - [3.1][8.3] ABC transporter, membrane spanning protein (xxxX)
Atu1881   - [1.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu1880   - [1.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu3339   - [2.1][8.3] ABC transporter, membrane spanning protein [trehalose/maltose] (thuF)
Atu3340   - [2.1][8.3] ABC transporter, membrane spanning protein [trehalose/maltose] (thuG)
Atu3350   - [2.1][8.3] ABC transporter, membrane spanning protein (xxxX)
Atu3351   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu3358   - [2.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu3359   - [2.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu0307   - [1.1][8.3] ABC transporter, membrane spanning protein [sn-Glycerol-3-phosphate] (ugpE)
Atu0306   - [1.1][8.3] ABC transporter, membrane spanning protein [sn-Glycerol-3-phosphate] (ugpA)
Atu0592   - [1.1][8.3] ABC transporter, membrane spanning protein (aglF)
Atu0593   - [1.1][8.3] ABC transporter, membrane spanning protein (aglG)
Atu0611   - [1.1][8.1] ABC transporter, membrane spanning protein (potB)
Atu0612   - [1.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu0613   - [1.1][8.4] ABC transporter, membrane spanning protein (xxxX)
Atu5481   - [3.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu5346   - [3.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu5345   - [3.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu3286   - [2.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu3284   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (malG)
Atu3283   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (malF)
Atu3268   - [2.1][8.1] ABC transporter, membrane spanning protein [dipeptide] (xxxX)
Atu3267   - [2.1][8.1] ABC transporter, membrane spanning protein [dipeptide] (xxxX)
Atu4597   - [2.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu4579   - [2.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu4571   - [2.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu4570   - [2.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu4558   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu4557   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu4537   - [2.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu4536   - [2.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu4524   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu4523   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu0421   - [1.1][8.2] ABC transporter, membrane spanning protein (pstC)
Atu0408   - [1.1][8.4] ABC transporter, membrane spanning protein (fbpA3)
Atu0393   - [1.1][8.3] ABC transporter, membrane spanning protein (xxxX)
Atu0392   - [1.1][8.3] ABC transporter, membrane spanning protein (xxxX)
Atu2148   - [1.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu2149   - [1.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu5246   - [3.1][8.1] ABC transporter, membrane spanning protein [spermidine/putrescine] (potC)
Atu5247   - [3.1][8.1] ABC transporter, membrane spanning protein [spermidine/putrescine] (potB)
Atu5254   - [3.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu5255   - [3.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu5263   - [3.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu5264   - [3.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu6143   - [4.1][8.1] ABC transporter, membrane spanning protein [agrocinopine] (accE)
Atu2013   - [1.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu3186   - [2.1][8.3] ABC transporter, membrane spanning protein [glycerol-3-phosphate] (ugpA)
Atu3187   - [2.1][8.3] ABC transporter, membrane spanning protein [glycerol-3-phosphate] (ugpE)
Atu3213   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu3214   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu3237   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu3238   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu2506   - [1.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu2507   - [1.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu2516   - [1.1][8.1] ABC transporter, membrane spanning protein [dipeptide] (dppC)
Atu2517   - [1.1][8.1] ABC transporter, membrane spanning protein [dipeptide] (dppB)
Atu2280   - [1.1][8.1] ABC transporter, membrane spanning protein [proline/glycine betaine] (xxxX)
Atu4680   - [2.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu4679   - [2.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu4663   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu4662   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide ] (xxxX)
Atu4653   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu4652   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu4623   - [2.1][8.1] ABC transporter, membrane spanning protein [dipeptide] (dppB)
Atu4622   - [2.1][8.1] ABC transporter, membrane spanning protein [dipeptide] (dppC)
Atu0198   - [1.1][8.1] ABC transporter, membrane spanning protein [proline/glycine/betaine] (xxxX)
Atu0196   - [1.1][8.1] ABC transporter, membrane spanning protein [proline/glycine/betaine] (xxxX)
Atu0189   - [1.1][8.1] ABC transporter, membrane spanning protein [peptide] (xxxX)
Atu0188   - [1.1][8.1] ABC transporter, membrane spanning protein [peptide] (xxxX)
Atu3893   - [2.1][8.3] ABC transporter, membrane spanning protein [sugarl] (xxxX)
Atu3894   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu3904   - [2.1][8.2] ABC transporter, membrane spanning protein [nitrate] (nrtB)
Atu4282   - [2.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu4281   - [2.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu4260   - [2.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu4258   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu4257   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu4251   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu4250   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu4245   - [2.1][8.1] ABC transporter, membrane spanning protein [polyamine] (xxxX)
Atu4244   - [2.1][8.1] ABC transporter, membrane spanning protein [polyamine] (xxxX)
Atu4234   - [2.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu4210   - [2.1][8.3] ABC transporter, membrane spanning protein [sugars] (xxxX)
Atu4209   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu4194   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu4193   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu5128   - [3.1][17.6] ABC transporter, membrane spanning protein [mannopine] (attB)
Atu5127   - [3.1][17.6] ABC transporter, membrane spanning protein [mannopine] (attA2)
Atu5081   - [3.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu5080   - [3.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu5070   - [3.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu5069   - [3.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu5060   - [3.1][8.3] ABC transporter, membrane spanning protein [glycerol-3-phosphate] (ugpE)
Atu5059   - [3.1][8.3] ABC transporter, membrane spanning protein [glycerol-3-phosphate] (ugpA)
Atu4440   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu4439   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu4433   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu4432   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu4423   - [2.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu4422   - [2.1][8.1] ABC transporter, membrane spanning protein [spermidine/putrescine] (xxxX)
Atu4402   - [2.1][8.2] ABC transporter, membrane spanning protein [anion] (xxxX)
Atu4360   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (thuF)
Atu4359   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu4045   - [2.1][8.1] ABC transporter, membrane spanning protein [glycine betaine] (xxxX)
Atu4114   - [2.1][8.1] ABC transporter, membrane spanning protein [dipeptide] (dppB)
Atu4115   - [2.1][8.1] ABC transporter, membrane spanning protein [dipeptide] (dppC)
Atu4155   - [2.1][8.99] ABC transporter, membrane spanning protein [aliphatic sulphonate] (xxxX)
Atu2562   - [1.1][8.4] ABC transporter, membrane spanning protein [molybdate] (modB)
Atu2588   - [1.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu2589   - [1.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu2602   - [1.1][8.3] ABC transporter, membrane spanning protein [maltose] (malG)
Atu2603   - [1.1][8.3] ABC transporter, membrane spanning protein [maltose] (malF)
Atu3022   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu3023   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu3036   - [2.1][8.1] ABC transporter, membrane spanning protein [dipeptide] (xxxX)
Atu3037   - [2.1][8.1] ABC transporter, membrane spanning protein [dipeptide] (moaE)
Atu3047   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu3048   - [2.1][8.1] ABC transporter, membrane spanning protein [oligopeptide] (xxxX)
Atu3086   - [2.1][8.1] ABC transporter, membrane spanning protein [spermidine/putrescine] (xxxX)
Atu3087   - [2.1][8.1] ABC transporter, membrane spanning protein [spermidine/putrescine] (xxxX)
Atu3097   - [2.1][8.3] ABC transporter, membrane spanning protein [sn-Glycerol-3-phosphate] (ugpA)
Atu3098   - [2.1][8.3] ABC transporter, membrane spanning protein [sn-Glycerol-3-phosphate] (ugpE)
Atu3100   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu3101   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu3112   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu3113   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu3132   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu3133   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu3149   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu3150   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu4785   - [2.1][8.4] ABC transporter, membrane spanning protein [iron] (afuB)
Atu4754   - [2.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)
Atu4753   - [2.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)

Family 1494

Atu0928    - [1.1][12.3] transcriptional regulator, LysR family (oriC)
Atu0856    - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu6029    - [4.1][12.3] transcriptional regulator, LysR family for nopaline metabolism (nocR)
Atu6024    - [4.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu5241    - [3.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu5546    - [3.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu2078    - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu6055    - [4.1][12.3] transcriptional regulator, LysR family (gcvA)
Atu5419    - [3.1][12.3] transcriptional regulator, LysR family (nocR)
Atu5215    - [3.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu4021    - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu1367    - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu4705    - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu3951   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu0672   - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu0873   - [1.1][12.3] transcriptional regulator, LysR family (oxyR)
Atu6088   - [4.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu6080   - [4.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu3440   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu5392   - [3.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu5208   - [3.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu5206   - [3.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu5197   - [3.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu5195   - [3.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu5187   - [3.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu5184   - [3.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu0654   - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu0664   - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu3381   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu3355   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu1209   - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu0605   - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu3978   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu3987   - [2.1][12.3] transcriptional regulator, LysR family (hexA)
Atu4004   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu1765   - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu4591   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu4543   - [2.1][12.3] transcriptional regulator, LysR family (pcaQ)
Atu2186   - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu2191   - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu5259   - [3.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu5303   - [3.1][12.3] transcriptional regulator, LysR family (dgdR)
Atu5325   - [3.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu5327   - [3.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu3197   - [2.1][12.3] transcriptional regulator, LysR family (ptxR)
Atu2480   - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu2512   - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu2312   - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu2350   - [1.1][12.3] transcriptional regulator, LysR family (gbpR)
Atu4646   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu4641   - [2.1][12.3] transcriptional regulator, LysR family (oxyR)
Atu0261   - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu0207   - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu3808   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu3810   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu3827   - [2.1][12.3] transcriptional regulator, LysR family (metR)
Atu3829   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu3889   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu4291   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu4288   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu4279   - [2.1][12.3] transcriptional regulator, LysR family (nac)
Atu4271   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu4264   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu5084   - [3.1][12.3] transcriptional regulator, LysR family (ttgS)
Atu4437   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu4419   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu4411   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu4367   - [2.1][12.3] transcriptional regulator, LysR family (gstR)
Atu4122   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu4151   - [2.1][12.3] transcriptional regulator, LysR family (gcvA)
Atu2559   - [1.1][12.3] transcriptional regulator, LysR family (xxxX)
Atu3078   - [2.1][12.3] transcriptional regulator, LysR family (ampR)
Atu3155   - [2.1][12.3] transcriptional regulator, lysR family (xxxX)
Atu4872   - [2.1][12.3] transcriptional regulator, LysR family (xxxX)

Family 161

Atu0857    - [1.1][5.99] oxidoreductase (xxxX)
Atu1074    - [1.1][5.99] NAD/NADP dependent oxidoreductase (xxxX)
Atu2417    - [1.1][5.99] dehydrogenase (xxxX)
Atu1095    - [1.1][3.1] 3-oxoacyl-(acyl carrier protein) reductase (fabG)
Atu0149    - [1.1][3.1] enoyl-(acyl-carrier-protein) reductase [NADH] (fabI)
Atu5214    - [3.1][5.99] dehydrogenase (xxxX)
Atu1338    - [1.1][3.1] 3-oxoacyl-(acyl carrier protein) reductase (fabG)
Atu0990    - [1.1][5.99] NAD/NADP dependent oxidoreductase (xxxX)
Atu3164    - [2.1][5.99] dehydrogenase (xxxX)
Atu3464   - [2.1][5.99] dehydrogenase (xxxX)
Atu0705   - [1.1][3.1] 3-oxoacyl-(acyl carrier protein) reductase (fabG)
Atu0757   - [1.1][3.1] enoyl-(acyl-carrier-protein) reductase [NADH] (fabI)
Atu1407   - [1.1][5.99] gluconate dehydrogenase (xxxX)
Atu1415   - [1.1][5.99] 3-hydroxyacyl-CoA dehydrogenase type II (xxxX)
Atu0864   - [1.1][5.99] oxidoreductase (xxxX)
Atu6062   - [4.1][5.99] 2-deoxy-D-gluconate 3-dehydrogenase (kduD)
Atu5391   - [3.1][5.99] NAD/NADP dependent oxidoreductase (xxxX)
Atu5210   - [3.1][5.99] dehydrogenase (xxxX)
Atu5185   - [3.1][5.99] short chain dehydrogenase (xxxX)
Atu5181   - [3.1][5.99] short chain dehydrogenase (xxxX)
Atu4466   - [2.1][5.99] oxidoreductase (xxxX)
Atu5465   - [3.1][3.1] 3-oxoacyl-(acyl-carrier-protein) reductase (fabG)
Atu5444   - [3.1][5.99] short-chain dehydrogenase (xxxX)
Atu5438   - [3.1][3.1] 3-oxoacyl-(acyl-carrier protein) reductase (fabG)
Atu1905   - [1.1][5.99] short chain dehydrogenase (xxxX)
Atu1897   - [1.1][5.99] short chain dehydrogenase (xxxX)
Atu3333   - [2.1][5.99] dehydrogenase (xxxX)
Atu1255   - [1.1][5.99] oxidoreductase (xxx)
Atu1130   - [1.1][5.99] dehydrogenase (xxxX)
Atu3301   - [2.1][5.6] short-chain alcohol dehydrogenase (fixR)
Atu3531   - [2.1][3.1] 3-oxoacyl-(acyl-carrier-protein) reductase (fabG)
Atu3591   - [2.1][5.99] short chain dehydrogenase (xxxX)
Atu4595   - [2.1][5.99] dehydrogenase (xxxX)
Atu4574   - [2.1][5.99] dehydrogenase (xxxX)
Atu5250   - [3.1][3.1] 3-oxoacyl-(acyl-carrier protein) reductase (fabG)
Atu5276   - [3.1][5.99] dehydrogenase (xxxX)
Atu5290   - [3.1][5.99] dehydrogenase (xxxX)
Atu6007   - [4.1][1.99] agrocinopine synthesis reductase (mas1)
Atu2042   - [1.1][5.99] short chain dehydrogenase (xxxX)
Atu2308   - [1.1][5.99] d-beta-hydroxybutyrate dehydrogenase (bdhA)
Atu2770   - [1.1][3.1] acetoacetyl CoA reductase (phbB)
Atu4629   - [2.1][5.99] oxidoreductase (xxxX)
Atu3813   - [2.1][3.1] 3-oxoacyl-(acyl-carrier protein) reductase (fabG)
Atu4280   - [2.1][5.99] short-chain dehydrogenase (xxxX)
Atu4220   - [2.1][7.99] short-chain dehydrogenase (xxxX)
Atu5156   - [3.1][17.6] short chain dehydrogenase dehydrogenases (atsC)
Atu5122   - [3.1][3.1] 3-oxoacyl-(acyl-carrier protein) reductase (fabG)
Atu4366   - [2.1][7.99] dehydrogenase/reductase (sdhX)
Atu4325   - [2.1][5.99] carbonyl reductase (cbr)
Atu4323   - [2.1][5.99] ribitol 2-dehydrogenase (rdh)
Atu4086   - [2.1][7.13] gluconate 5-dehydrogenase (idnO)
Atu4110   - [2.1][1.6] serine dehydrogenase (sdh)
Atu4131   - [2.1][3.2] hydroxybutyrate dehydrogenase (xxxX)
Atu2597   - [1.1][5.99] short-chain dehydrogenase (xxxX)
Atu2668   - [1.1][5.99] oxidoreductase (xxxX)
Atu3665   - [2.1][5.99] short-chain dehydrogenase (ditI)
Atu3026   - [2.1][5.99] short chain dehydrogenase (xxxX)
Atu3051   - [2.1][5.99] agropine synthesis reductase (mas1)
Atu3074   - [2.1][5.99] short chain dehydrogenase (xxxX)
Atu3141   - [2.1][5.99] 2-deoxy-D-gluconate 3-dehydrogenase (kduD)
Atu4877   - [2.1][5.99] short-chain dehydrogenase (xxxX)
Atu4865   - [2.1][5.99] oxidoreductase (xxxX)
Atu4839   - [2.1][12.1] C factor (csgA)
Atu4825   - [2.1][5.99] dehydrogenase (xxxX)
Atu4821   - [2.1][3.1] 3-oxoacyl-(acyl-carrier protein) reductase (fabG)

Family 1282

Atu0129     - [1.1][8.5] ABC transporter, membrane spanning protein [sugar/ribonucleotide] (xxxX)
Atu2413     - [1.1][8.1] ABC transporter, membrane spanning protein [urea/amide] (xxxX)
Atu2412     - [1.1][8.1] ABC transporter, membrane spanning protein [urea/amide] (xxxX)
Atu0128    - [1.1][8.5] ABC transporter, membrane spanning protein [sugar/ribonucleotide] (xxxX)
Atu2426    - [1.1][8.1] ABC transporter, membrane spanning protein [branched chain amino acid] (xxxX)
Atu2427    - [1.1][8.1] ABC transporter, membrane spanning protein (livH)
Atu3489    - [2.1][8.3] ABC transporter, membrane spanning protein (xxxX)
Atu3490    - [2.1][8.3] ABC transporter, membrane spanning protein (xxxX)
Atu0064   - [1.1][8.3] ABC transporter, membrane spanning protein [sugar] (frcC)
Atu1790   - [1.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu1791   - [1.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu1411   - [1.1][8.1] ABC transporter, nucleotide binding/ATPase protein (xxxX)
Atu1412   - [1.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu6068   - [4.1][8.3] ABC transporter, membrane spanning protein [ribose] (rbsC)
Atu2818   - [1.1][8.3] ABC transporter, membrane spanning protein [ribose] (rbsC)
Atu1900   - [1.1][8.3] ABC transporter, membrane spanning protein [ribose] (rbsC)
Atu3370   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu5523   - [3.1][8.1] ABC transporter, membrane spanning protein [branched chain amino acid] (xxxX)
Atu5524   - [3.1][8.1] ABC transporter, membrane spanning protein [branched chain amino acid] (xxxX)
Atu5532   - [3.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu5533   - [3.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu1125   - [1.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu3534   - [2.1][8.3] ABC transporter, membrane spanning protein (xxxX)
Atu3535   - [2.1][8.3] ABC transporter, membrane spanning protein (xxxX)
Atu3575   - [2.1][8.3] ABC transporter, membrane spanning protein [xylose] (xylH)
Atu4518   - [2.1][8.1] ABC transporter, membrane spanning protein [branched chain amino acid] (livH)
Atu4517   - [2.1][8.1] ABC transporter, membrane spanning protein [branched chain amino acid] (livM)
Atu3199   - [2.1][8.3] ABC transporter, membrane spanning protein [ribose] (xxxX)
Atu3224   - [2.1][8.3] ABC transporter, membrane spanning protein [ribose] (xxxX)
Atu3225   - [2.1][8.3] ABC transporter, membrane spanning protein [ribose] (xxxX)
Atu2346   - [1.1][8.3] ABC transporter, membrane spanning protein [sugar] (gguB)
Atu3819   - [2.1][8.3] ABC transporter, membrane spanning protein [ribose] (rbsC)
Atu3820   - [2.1][8.3] ABC transporter, membrane spanning protein [ribose] (rbsC)
Atu3879   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu4372   - [2.1][8.3] ABC transporter, membrane spanning protein [ribose] (rbsC)
Atu4371   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu4322   - [2.1][8.3] ABC transporter, membrane spanning protein [ribose] (rbsC)
Atu4030   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu4031   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu4126   - [2.1][8.1] ABC transporter, membrane spanning protein [branched chain amino acid] (xxxX)
Atu4127   - [2.1][8.1] ABC transporter, membrane spanning protein [branched chain amino acid] (xxxX)
Atu2671   - [1.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu3065   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu4845   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (ydeZ)
Atu4844   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (RBSC)
Atu4747   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu4746   - [2.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)

Family 1715

Atu4685     - [2.1][12.5] transcriptional regulator, LacI family (xxxX)
Atu5239    - [3.1][12.5] transcriptional regulator, LacI family (xxxX)
Atu4505    - [2.1][12.5] transcriptional regulator, LacI family (pckR)
Atu5007    - [3.1][12.5] transcriptional regulator, LacI family (xxxX)
Atu5433    - [3.1][12.5] transcriptional regulator, LacI family (xxxX)
Atu3162    - [2.1][12.5] transcriptional regulator, LacI family (xxxX)
Atu0063   - [1.1][8.11] ABC transporter, substrate binding protein [sugar] (frcB)
Atu3487   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu1522   - [1.1][12.5] transcriptional regulator, LacI family (xxxX)
Atu6070   - [4.1][8.11] ABC transporter, substrate binding protein [ribose] (rbsB)
Atu5393   - [3.1][12.5] transcriptional regulator, LacI family (xxxX)
Atu4481   - [2.1][12.5] transcriptional regulator, LacI family (xxxX)
Atu3372   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu2817   - [1.1][8.11] ABC transporter, substrate binding protein [ribose] (rbsB)
Atu1899   - [1.1][8.11] ABC transporter, substrate binding protein [ribose] (rbsB)
Atu3337   - [2.1][12.5] transcriptional regulator, LacI family (thuR)
Atu0590   - [1.1][12.1] transcriptional regulator repressor (aglR)
Atu3533   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu3576   - [2.1][8.11] ABC transporter, substrate binding protein [xylose] (xylF)
Atu4556   - [2.1][12.5] transcriptional regulator, LacI family (purR)
Atu4552   - [2.1][8.11] ABC transporter, substrate binding protein (xxxX)
Atu4551   - [2.1][8.11] ABC transporter, substrate binding protein (xxxX)
Atu4550   - [2.1][12.5] transcriptional regulator, LacI family (xxxX)
Atu3198   - [2.1][8.11] ABC transporter, substrate binding protein [ribose] (xxxX)
Atu3222   - [2.1][8.11] ABC transporter, substrate binding protein [ribose] (xxxX)
Atu2348   - [1.1][8.3] sugar binding protein (chvE)
Atu3821   - [2.1][8.11] ABC transporter, substrate binding protein [ribose] (rbsB)
Atu3881   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu4254   - [2.1][12.5] transcriptional regulator, LacI family (xxxX)
Atu5078   - [3.1][12.5] transcriptional regulator, LacI family (xxxX)
Atu4420   - [2.1][12.5] transcriptional regulator, LacI family (xxxX)
Atu4373   - [2.1][12.5] transcriptional repressor, LacI family (cytR)
Atu4369   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (rbsB)
Atu4364   - [2.1][12.5] transcriptional regulator, LacI family (thuR)
Atu4320   - [2.1][8.11] ABC transporter, substrate binding protein [ribose] (rbsB)
Atu4033   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu3062   - [2.1][12.5] transcriptional regulator, LacI family (xxxX)
Atu3063   - [2.1][8.3] ABC transporter, nucleotide binding/ATPase protein (xxx)
Atu3107   - [2.1][12.5] transcriptional regulator, LacI family (xxxX)
Atu4842   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu4744   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu4743   - [2.1][12.5] transcriptional regulator, LacI family (xxxX)

Family 804

Atu2259    - [1.1][8.7] MFS permease (xxxX)
Atu3804    - [2.1][8.7] permease (xxxX)
Atu1300    - [1.1][8.7] MFS permease (xxxX)
Atu1086    - [1.1][8.7] MFS permease (xxxX)
Atu1697    - [1.1][14.6] MFS permease [drug] (xxxX)
Atu4500    - [2.1][8.3] MFS permease [sugar] (setA)
Atu0960    - [1.1][8.7] MFS permease (xxxX)
Atu0838    - [1.1][8.7] MFS permease (xxxX)
Atu0143    - [1.1][8.7] MFS permease (xxxX)
Atu4017    - [2.1][8.3] MFS permease [alpha-ketoglutarate] (kgtP)
Atu0942    - [1.1][8.7] MFS permease (xxxX)
Atu2090    - [1.1][8.3] ABC transporter, membrane spanning protein [sugar] (xxxX)
Atu0091    - [1.1][8.7] MFS permease (xxxX)
Atu2708    - [1.1][8.7] MFS permease (xxxX)
Atu2724    - [1.1][8.7] MFS permease (xxxX)
Atu1000    - [1.1][8.7] MFS permease (xxxX)
Atu4710    - [2.1][8.7] MFS permease (xxxX)
Atu2361   - [1.1][14.6] MFS permease [drug] (xxxX)
Atu5395   - [3.1][8.7] MFS permease (xxxX)
Atu5200   - [3.1][14.6] efflux protein (xxxX)
Atu0621   - [1.1][8.7] MFS permease (xxxX)
Atu1040   - [1.1][8.7] MFS permease (xxxX)
Atu4479   - [2.1][14.6] MFS permease [multidrug] (emrB)
Atu1855   - [1.1][8.7] MFS permease (xxxX)
Atu1152   - [1.1][8.7] MFS permease (xxxX)
Atu3984   - [2.1][8.7] MFS permease (xxxX)
Atu3988   - [2.1][8.7] MFS permease (xxxX)
Atu2134   - [1.1][8.7] MFS permease (xxxX)
Atu2154   - [1.1][8.3] MFS permease[proline/betaine] (tphA)
Atu5323   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu3192   - [2.1][8.3] MFS permease [monocarboxylate] (xxxX)
Atu2525   - [1.1][8.7] MFS permease (xxxX)
Atu2305   - [1.1][8.7] MFS permease (xxxX)
Atu4292   - [2.1][14.6] chloramphenicol resistance protein (xxxX)
Atu4206   - [2.1][14.6] tetracycline resistance protein (tetA)
Atu4326   - [2.1][8.1] MFS permease [proline/betaine] (proB)
Atu2594   - [1.1][8.3] MFS permease [sugar] (xxxX)
Atu2659   - [1.1][8.7] MFS permease (xxxX)
Atu2666   - [1.1][14.6] MFS permease [drug] (xxxX)
Atu3741   - [2.1][8.7] MFS permease (xxxX)
Atu3154   - [2.1][14.6] fosmidomycin resistance protein (fsr)

Family 2390

Atu4718    - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu5404    - [3.1][12.1] transcriptional regulator (xxxX)
Atu5406    - [3.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu0160    - [1.1][12.99] transcriptional regulator, GntR family (hutC)
Atu3799    - [2.1][12.99] transcriptional regulator, GntR family (hutC)
Atu3794    - [2.1][12.99] transcriptional regulator, FadR/GntR family (xxxX)
Atu3176    - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu4702    - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu3961   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu3963   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu3461   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu3936   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu1788   - [1.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu1387   - [1.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu1405   - [1.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu1419   - [1.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu0662   - [1.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu0791   - [1.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu2821   - [1.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu5483   - [3.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu3294   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu3280   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu3532   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu3226   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu3252   - [2.1][12.99] transcriptional regulator, GntR family (exuR)
Atu2504   - [1.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu2740   - [1.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu4674   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu4624   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu0271   - [1.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu0182   - [1.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu3815   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu3908   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu4232   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu4191   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu5125   - [3.1][17.6] transcriptional regulator, GntR family (atrA)
Atu5075   - [3.1][12.99] transcriptional regulator, GntR family (pdhR)
Atu4118   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu2606   - [1.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu3020   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu3144   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)

Family 271

Atu2434    - [1.1][12.2] two component response regulator (CtrA)
Atu3786    - [2.1][12.2] two component response regulator (kdpE)
Atu2419    - [1.1][12.99] transcriptional regulator, LuxR family (xxxX)
Atu0970    - [1.1][12.2] two component response regulator (phoP)
Atu0978    - [1.1][12.2] two component response regulator (ragA)
Atu0484    - [1.1][12.2] two component response regulator (xxxX)
Atu4019    - [2.1][12.2] two component response regulator (xxxX)
Atu2206    - [1.1][12.2] two component response regulator (petR)
Atu4712    - [2.1][12.2] two component response regulator (phoP)
Atu0034   - [1.1][17.99] two component response regulator (chvI)
Atu0050   - [1.1][12.2] two component response regulator (actR)
Atu5175   - [3.1][12.2] two component response regulator (basR)
Atu0629   - [1.1][12.2] two component response regulator (xxxX)
Atu0519   - [1.1][14.13] protein-glutamate methylesterase (cheB)
Atu0573   - [1.1][12.1] transcriptional regulator (xxxX)
Atu5505   - [3.1][12.2] two component response regulator (xxxX)
Atu1116   - [1.1][12.2] two component response regulator (nwsB)
Atu0425   - [1.1][12.2] two component response regulator (phoB)
Atu5267   - [3.1][12.2] two component response regulator (narL)
Atu6178   - [4.1][17.99] two component response regulator (virG)
Atu2466   - [1.1][12.2] two component response regulator (tctD)
Atu2536   - [1.1][12.2] two component response regulator (xxxX)
Atu2763   - [1.1][12.2] two component response regulator (mtrA)
Atu4638   - [2.1][12.2] two component response regulator (copR)
Atu4300   - [2.1][12.2] two component response regulator (nwsB)
Atu5121   - [3.1][12.2] two component response regulator (phoB)
Atu5119   - [3.1][12.2] two component response regulator (phoB)
Atu4035   - [2.1][12.2] two component response regulator (xxxX)
Atu3781   - [2.1][12.2] two component response regulator (xxxX)
Atu4803   - [2.1][12.2] two component response regulator (xxxX)
Atu4795   - [2.1][12.99] transcriptional regulator, LuxR family (bme13)
Atu4782   - [2.1][12.2] two component response regulator (drrA)
Atu4774   - [2.1][12.2] two component response regulator (nodW)

Family 75

Atu6139    - [4.1][8.11] ABC transporter, substrate binding protein [agrocinopine] (accA)
Atu4719    - [2.1][8.11] ABC transporter, substrate binding protein [dipeptide] (dppA)
Atu4695    - [2.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)
Atu1202    - [1.1][8.11] ABC transporter, substrate binding protein (xxxX)
Atu6073   - [4.1][8.11] ABC transporter, substrate binding protein [peptide] (dfpA)
Atu3455   - [2.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)
Atu3444   - [2.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)
Atu3442   - [2.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)
Atu3433   - [2.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)
Atu3375   - [2.1][8.1] ABC transporter, substrate binding protein [peptide] (xxxX)
Atu3409   - [2.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)
Atu5343   - [3.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)
Atu3269   - [2.1][8.11] ABC transporter, substrate binding protein [dipeptide] (xxxX)
Atu1774   - [1.1][8.11] ABC transporter, substrate binding protein [peptide] (xxxX)
Atu4525   - [2.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)
Atu5253   - [3.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)
Atu3212   - [2.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)
Atu2518   - [1.1][8.11] ABC transporter, substrate binding protein [dipeptide] (dppA)
Atu4661   - [2.1][8.11] ABC transporter, substrate binding protein [alpha-galactoside] (agpA)
Atu4626   - [2.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)
Atu0187   - [1.1][8.11] ABC transporter, substrate binding protein [peptide] (xxxX)
Atu4259   - [2.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)
Atu4192   - [2.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)
Atu5071   - [3.1][8.11] ABC transporter, substrate binding protein [dipeptide] (dppA)
Atu4438   - [2.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)
Atu4431   - [2.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)
Atu4113   - [2.1][8.11] ABC transporter, substrate binding protein [dipeptide] (dppA)
Atu2587   - [1.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)
Atu3041   - [2.1][8.11] ABC transporter, substrate binding protein [dipeptide] (xxxX)
Atu3049   - [2.1][8.11] ABC transporter, substrate binding protein [oligopeptide] (xxxX)

Family 1996

Atu5403    - [3.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu3165    - [2.1][8.11] ABC transporter, substrate binding protein [sorbitol/mannitol] (xxxX)
Atu3174    - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu3185    - [2.1][8.11] ABC transporter, substrate binding protein [glycerol-3-phosphate] (ugpB)
Atu3967   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu1404   - [1.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu5459   - [3.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu3338   - [2.1][8.11] ABC transporter, substrate binding protein [trehalose/maltose] (thuE)
Atu3352   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu0305   - [1.1][8.11] ABC transporter, substrate binding protein [sn-glycerol 3-phosphate] (ugpA)
Atu3282   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu4564   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu0394   - [1.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu5265   - [3.1][8.11] sugar binding protein (xxxX)
Atu3239   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu2505   - [1.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu4654   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu3891   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu4252   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu4208   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu5058   - [3.1][8.11] ABC transporter, substrate binding protein [glycerol-3-phosphate] (ugpB)
Atu4447   - [2.1][8.11] ABC transporter, substrate binding protein [sorbitol] (xxxX)
Atu4361   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu2601   - [1.1][8.11] ABC transporter, substrate binding protein [maltose] (malE)
Atu3096   - [2.1][8.11] ABC transporter, substrate binding protein [sn-glycerol 3-phosphate] (ugpB)
Atu3102   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu3106   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu3114   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu3130   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu3151   - [2.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)

Family 146

Atu0825    - [1.1][7.5] quinone oxidoreductase (qor)
Atu5240    - [3.1][5.99] alcohol dehydrogenase (adhP)
Atu5213    - [3.1][5.99] zinc-binding dehydrogenase (xxxX)
Atu0996    - [1.1][5.99] zinc-binding dehydrogenase (xxxX)
Atu3163    - [2.1][5.99] zinc-binding dehydrogenase (xxxX)
Atu1408   - [1.1][7.13] sorbitol dehydrogenase (gutB)
Atu5202   - [3.1][7.7] alcohol dehydrogenase [benzyl] (xylB)
Atu5188   - [3.1][5.99] zinc-binding dehydrogenase (xxxX)
Atu5182   - [3.1][7.5] quinone oxidoreductase (qor)
Atu0626   - [1.1][5.99] alcohol dehydrogenase (adhP)
Atu5447   - [3.1][5.99] zinc-binding oxidoreductase (xxxX)
Atu2814   - [1.1][5.99] zinc-binding dehydrogenase (xxxX)
Atu2151   - [1.1][7.99] alcohol dehydrogenase (adh)
Atu5324   - [3.1][5.99] zinc-binding oxidoreductase (xxxX)
Atu2022   - [1.1][7.99] NADP-dependent alcohol dehydrogenase (adh)
Atu3256   - [2.1][5.99] zinc-binding dehydrogenase (xxxX)
Atu1557   - [1.1][5.99] alcohol dehydrogenase (adh)
Atu1567   - [1.1][5.99] glutathione-independent formaldehyde dehydrogenase (fdhA)
Atu1595   - [1.1][7.7] NADPH:quinone reductase (xxxX)
Atu1670   - [1.1][7.7] alcohol dehydrogenase class III (adhC)
Atu4289   - [2.1][7.7] alcohol dehydrogenase (adhC)
Atu4318   - [2.1][5.99] xylitol dehydrogenase (xxxX)
Atu4087   - [2.1][5.99] zinc-binding dehydrogenase (xxxX)
Atu4870   - [2.1][7.5] NADP-dependent quinone oxidoreductase (xxxX)
Atu4740   - [2.1][5.99] zinc-binding dehydrogenase (xxxX)

Family 3424

Atu1081    - [1.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu3462   - [2.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu0865   - [1.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu1438   - [1.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu5390   - [3.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu5341   - [3.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu1767   - [1.1][12.99] transcriptional regulator, AraC family (xxxX)
Atu4575   - [2.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu4545   - [2.1][12.4] transcriptional regulator, AraC family (pobR)
Atu0410   - [1.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu5274   - [3.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu2021   - [1.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu3227   - [2.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu4644   - [2.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu0264   - [1.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu0248   - [1.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu0239   - [1.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu4297   - [2.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu4225   - [2.1][12.4] transcriptional regulator, AraC family (glxA)
Atu5141   - [3.1][17.6] transcriptional regulator, AraC family (attO)
Atu4319   - [2.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu4309   - [2.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu3152   - [2.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu4880   - [2.1][12.4] transcriptional regulator, AraC family (xxxX)

Family 2288

Atu0971    - [1.1][12.2] two component sensor kinase (popQ)
Atu0979    - [1.1][12.2] two component sensor kinase (ragB)
Atu4018    - [2.1][12.2] Two component sensor kinase (xxxX)
Atu0113    - [1.1][12.2] two component sensor kinase (dctB)
Atu2207    - [1.1][12.2] two component sensor kinase (envZ)
Atu4711    - [2.1][12.2] two component sensor kinase (phoQ)
Atu0033   - [1.1][17.99] two component sensor kinase (chvG)
Atu0051   - [1.1][12.2] two component sensor kinase (actS)
Atu1447   - [1.1][12.2] two component sensor kinase (ntrY)
Atu1445   - [1.1][12.2] two component sensor kinase (ntrB)
Atu5176   - [3.1][12.2] two component sensor kinase (basS)
Atu0628   - [1.1][12.2] two component sensor kinase (xxxX)
Atu1888   - [1.1][12.2] two component sensor kinase (xxxX)
Atu5506   - [3.1][12.2] two component sensor kinase (xxxX)
Atu1115   - [1.1][12.2] two component sensor kinase (fixL)
Atu3297   - [2.1][12.2] two component sensor kinase for C4-dicarboxylate transport (dctB)
Atu0419   - [1.1][12.2] two component sensor kinase (phoR)
Atu0388   - [1.1][12.2] two component sensor kinase (xxxX)
Atu1986   - [1.1][12.2] two component sensor kinase (xxxX)
Atu2465   - [1.1][12.2] two component sensor kinase (tctE)
Atu2535   - [1.1][12.2] two component sensor kinase (xxxX)
Atu4639   - [2.1][12.2] two component sensor kinase (copS)
Atu3782   - [2.1][12.2] two component sensor kinase (xxxX)
Atu4781   - [2.1][12.2] two component sensor kinase (xxxX)

Family 6

Atu4687     - [2.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu6027    - [4.1][8.11] ABC transporter, substrate binding protein [nopaline] (nocT)
Atu5237    - [3.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu5409    - [3.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu5006    - [3.1][8.1] ABC transporter, substrate binding protein [glutamine] (glnH)
Atu0479    - [1.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu2365   - [1.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu1388   - [1.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu1399   - [1.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu3415   - [2.1][8.11] ABC transporter, substrate binding protein (xxxX)
Atu3416   - [2.1][8.11] ABC transporter, substrate binding protein (xxxX)
Atu1879   - [1.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu3357   - [2.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu5482   - [3.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu4535   - [2.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu4534   - [2.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu3245   - [2.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu3246   - [2.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu4678   - [2.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu1577   - [1.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu4284   - [2.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu4233   - [2.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu4755   - [2.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)

Family 3596

Atu5227    - [3.1][5.99] flavin-dependent oxidoreductase (xxxX)
Atu6084   - [4.1][7.99] nitrilotriacetate monooxygenase, component A (xxxX)
Atu6079   - [4.1][5.99] nitrilotriacetate monooxygenase (ssuD)
Atu6078   - [4.1][5.99] nitrilotriacetate monooxygenase (ssuD)
Atu6061   - [4.1][5.2] nitrilotriacetate monooxygenase (nrtA)
Atu3451   - [2.1][5.99] monooxygenase (xxxX)
Atu3450   - [2.1][5.99] nitrilotriacetate monooxygenase (xxxX)
Atu3446   - [2.1][5.99] monooxygenase (xxxX)
Atu3441   - [2.1][7.99] nitrilotriacetate monooxygenase (xxxX)
Atu3430   - [2.1][5.5] alkanesulfonate monooxygenase (ssuD)
Atu3426   - [2.1][5.5] sulfonate monooxygenase (ssuD)
Atu3420   - [2.1][5.99] monooxygenase (xxxX)
Atu3362   - [2.1][5.99] monooxygenase (xxxX)
Atu5526   - [3.1][5.99] monooxygenase (xxxX)
Atu2500   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3279   - [2.1][5.5] methanesulfonate sulfonatase (xxxD)
Atu2307   - [1.1][5.99] monooxygenase (xxxX)
Atu4293   - [2.1][5.99] monooxygenase (xxxX)
Atu4240   - [2.1][14.99] alkanal monooxygenase alpha chain (xxxX)
Atu4121   - [2.1][5.99] monooxygenase (xxxX)
Atu3671   - [2.1][5.99] monooxygenase (xxxX)

Family 2331

Atu1696    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2079    - [1.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu3521    - [2.1][8.7] permease (xxxX)
Atu4011    - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu0985    - [1.1][8.7] permease (xxxX)
Atu0992    - [1.1][8.7] permease (xxxX)
Atu2199    - [1.1][8.7] permease (xxxX)
Atu1863   - [1.1][8.7] permease (xxxX)
Atu1248   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu4002   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu5339   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu1776   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu1771   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2448   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2334   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2337   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu4657   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu1558   - [1.1][8.7] permease (xxxX)
Atu0273   - [1.1][12.1] regulator protein pecM (pecM)
Atu0208   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu4150   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 1584

Atu6132    - [4.1][14.13] methyl-accepting chemotaxis protein (mcpA)
Atu2223    - [1.1][14.13] methyl-accepting chemotaxis protein (mcpA)
Atu0738   - [1.1][14.13] chemotaxis methyl-accepting protein (mcpG)
Atu0872   - [1.1][14.13] methyl-accepting chemotaxis protein (mcpC)
Atu0646   - [1.1][14.13] methyl-accepting chemotaxis protein A (mcpA)
Atu1027   - [1.1][14.13] methyl-accepting chemotaxis protein (mcpV)
Atu0526   - [1.1][14.13] methyl-accepting chemotaxis protein (mclA)
Atu0514   - [1.1][14.13] methyl-accepting chemotaxis protein (xxxX)
Atu5442   - [3.1][14.13] methyl-accepting chemotaxis protein (xxxX)
Atu1912   - [1.1][14.13] methyl-accepting chemotaxis protein (mclA)
Atu3330   - [2.1][14.13] methyl-accepting chemotaxis protein (mclA)
Atu3363   - [2.1][14.13] sensory methylation accepting chemotaxis protein (xxxX)
Atu0387   - [1.1][14.13] methyl-accepting chemotaxis protein (mcpA)
Atu0373   - [1.1][14.13] methyl-accepting chemotaxis protein (xxxX)
Atu2173   - [1.1][14.13] methyl-accepting chemotaxis protein (mcpA)
Atu5266   - [3.1][12.2] two component sensor kinase (xxxX)
Atu2360   - [1.1][14.13] methyl-accepting chemotaxis protein (mcpA)
Atu2618   - [1.1][14.13] methyl-accepting chemotaxis protein (cheD)
Atu3725   - [2.1][14.13] methyl-accepting chemotaxis protein (xxxX)
Atu3094   - [2.1][14.13] methyl-accepting chemotaxis protein (mcpA)
Atu4736   - [2.1][14.13] methyl-accepting chemotaxis protein (xxxX)

Family 1051

Atu4508    - [2.1][5.99] oxoreductase (xxxX)
Atu5004    - [3.1][5.99] NAD binding oxidoreductase (xxxX)
Atu5435    - [3.1][5.99] oxidoreductase (xxxX)
Atu4012    - [2.1][7.13] myo-inositol 2-dehydrogenase (idhA)
Atu3964   - [2.1][5.99] dehydrogenase (xxxX)
Atu3965   - [2.1][5.99] oxidoreductase (xxxX)
Atu3966   - [2.1][5.99] oxidoreductase (xxxX)
Atu5199   - [3.1][5.99] oxidoreductase (xxxX)
Atu5191   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu3343   - [2.1][8.3] trehalose utilization-related protein (ThuB)
Atu3347   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu1113   - [1.1][5.99] dehydrogenase (xxxX)
Atu4554   - [2.1][7.13] myo-inositol 2-dehydrogenase (iolG)
Atu3234   - [2.1][5.99] NAD binding oxidoreductase (xxxX)
Atu3241   - [2.1][5.99] dehydrogenase (xxxX)
Atu0266   - [1.1][5.99] oxidoreductase (xxxX)
Atu4375   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu4363   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu2604   - [1.1][5.99] oxidoreductase (xxxX)
Atu3116   - [2.1][5.99] oxidoreductase (xxxX)
Atu3119   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 2204

Atu2061    - [1.1][5.99] hydrolase (xxxX)
Atu3493    - [2.1][14.6] non-heme haloperoxidase (xxxX)
Atu5226    - [3.1][5.99] 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase (pca)
Atu3463   - [2.1][14.3] non-heme chloroperoxidase (cpoF)
Atu3930   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu1814   - [1.1][14.3] epoxide hydrolase (xxxX)
Atu5389   - [3.1][14.6] non-heme haloperoxidase (xxxX)
Atu5190   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu5446   - [3.1][15.99] cultivar specificity protein W78 (xxxX)
Atu5495   - [3.1][5.99] hydrolase (xxxX)
Atu4542   - [2.1][7.99] beta-ketoadipate enol-lactone hydrolase (pcaD)
Atu2126   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu5296   - [3.1][5.99] arylester hydrolase (xxxX)
Atu5297   - [3.1][5.99] hydrolase (xxxX)
Atu2497   - [1.1][5.99] hydrolase (xxxX)
Atu1572   - [1.1][5.99] hydrolase (xxxX)
Atu4238   - [2.1][5.99] hydrolase (xxxX)
Atu5065   - [3.1][14.3] non-heme chloroperoxidase (prxC)
Atu3664   - [2.1][14.3] epoxide hydrolase (ephA)
Atu4778   - [2.1][5.99] non-heme chloroperoxidase (cpo)

Family 1034

Atu6021    - [4.1][7.99] D-nopaline dehydrogenase (noxB)
Atu5003    - [3.1][7.2] santhopine deaminating protein (agaE)
Atu3947   - [2.1][5.99] oxidoreductase (ordL)
Atu3952   - [2.1][5.99] oxidoreductase (xxxX)
Atu3958   - [2.1][5.99] oxidoreductase (xxxX)
Atu3404   - [2.1][5.99] oxidoreductase (ordL)
Atu3414   - [2.1][1.99] agaE protein (agaE)
Atu3364   - [2.1][7.1] D-amino acid dehydrogenase (xxxX)
Atu0601   - [1.1][5.99] oxidoreductase (ordL)
Atu3293   - [2.1][7.2] D-amino acid dehydrogenase, small subunit (dadA)
Atu2734   - [1.1][5.99] dehydrogenase (xxxX)
Atu4682   - [2.1][7.2] D-amino acid dehydrogenase, small subunit (dadA)
Atu0194   - [1.1][5.99] oxidoreductase (ordL)
Atu4224   - [2.1][1.6] sarcosine oxidase beta subunit (soxB)
Atu4310   - [2.1][1.6] sarcosine oxidase beta subunit (soxB)
Atu4066   - [2.1][1.6] sarcosine oxidase beta subunit (soxB)
Atu4138   - [2.1][5.99] oxidoreductase (xxxX)
Atu2560   - [1.1][5.99] oxidoreductase (ordL)
Atu3046   - [2.1][5.99] oxidoreductase (xxxX)
Atu3050   - [2.1][5.99] oxidoreductase (agaE)

Family 255

Atu2055    - [1.1][8.4] HlyD family secretion protein (xxxX)
Atu3797    - [2.1][8.7] HlyD family secretion protein (xxxX)
Atu3796    - [2.1][8.7] efflux protein (xxxX)
Atu1087    - [1.1][14.6] secretion protein (xxxX)
Atu5539    - [3.1][8.7] HlyD family secretion protein (xxxX)
Atu2392   - [1.1][8.7] HlyD family secretion protein (xxxX)
Atu1815   - [1.1][8.7] HlyD family secretion protein (xxxX)
Atu5382   - [3.1][8.7] HlyD family secretion protein (xxxX)
Atu5177   - [3.1][14.6] efflux protein (xxxX)
Atu4478   - [2.1][14.6] multidrug resistance efflux pump (emrA)
Atu3273   - [2.1][8.7] HlyD family secretion protein (xxxX)
Atu3203   - [2.1][14.6] RND multidrug efflux membrane permease (acrA)
Atu2482   - [1.1][8.7] HlyD family secretion protein (mexE)
Atu4666   - [2.1][8.7] HlyD family secretion protein (xxxX)
Atu4637   - [2.1][8.7] nolF secretion protein (nolF)
Atu4218   - [2.1][8.7] multidrug efflux protein (xxxX)
Atu5091   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu2550   - [1.1][14.6] acriflavin resistance protein A (acrA)
Atu3057   - [2.1][16.3] hypothetical protein (xxxX)

Family 143

Atu0829    - [1.1][5.99] betaine aldehyde dehydrogenase (betB)
Atu3498    - [2.1][5.99] aldehyde dehydrogenase (xxxX)
Atu5228    - [3.1][5.99] aldehyde dehydrogenase (dhaS)
Atu2224    - [1.1][7.99] aldehyde dehydrogenase (aldA)
Atu3950   - [2.1][5.99] aldehyde dehydrogenase (xxxX)
Atu3959   - [2.1][5.99] aldehyde dehydrogenase (dhaL)
Atu5204   - [3.1][5.99] aldehyde dehydrogenase [betaine] (gbsA)
Atu3401   - [2.1][5.99] aldehyde dehydrogenase (xxxX)
Atu3403   - [2.1][5.99] succinate semialdehyde dehydrogenase (attK2)
Atu3259   - [2.1][5.99] dehydrogenase (xxxX)
Atu2139   - [1.1][5.99] aldehyde dehydrogenase (xxxX)
Atu4645   - [2.1][7.99] vanillin: NAD oxidoreductase (vdh)
Atu0205   - [1.1][7.2] methylmalonate-semialdehyde dehydrogenase (mmsA)
Atu4247   - [2.1][5.1] aldehyde dehydrogenase (attK)
Atu4241   - [2.1][5.99] aldehyde dehydrogenase (dhaS)
Atu5137   - [3.1][17.6] NAD-dependent succinate aldehyde dehydrogenases (attK)
Atu4153   - [2.1][5.99] aldehyde dehydrogenase (xxxX)
Atu4849   - [2.1][5.99] NADP-dependent aldehyde dehydrogenase (xxxX)
Atu4762   - [2.1][5.99] succinate semialdehyde dehydrogenase (gabD)

Family 2949

Atu3798    - [2.1][12.99] transcriptional regulator, TetR family (xxxX)
Atu1314    - [1.1][12.99] transcriptional regulator, TetR family (xxxX)
Atu2384   - [1.1][12.99] transcriptional regulator, TetR family (xxxX)
Atu5386   - [3.1][12.99] transcriptional regulator, TetR family (xxxX)
Atu5383   - [3.1][12.99] transcriptional regulator, TetR family (xxxX)
Atu4477   - [2.1][12.99] transcriptional regulator, TetR family (xxxX)
Atu5443   - [3.1][12.99] transcriptional regulator, TetR family (xxxX)
Atu4530   - [2.1][12.99] transcriptional regulator, TetR family (xxxX)
Atu2135   - [1.1][12.99] transcriptional regulator, TetR family (xxxX)
Atu5295   - [3.1][12.99] transcriptional regulator, TetR family (xxxX)
Atu2020   - [1.1][12.99] transcriptional regulator, TetR family (xxxX)
Atu3201   - [2.1][12.99] transcriptional regulator, TetR family (acrR)
Atu2320   - [1.1][12.99] transcriptional regulator, tetR family (xxxX)
Atu1624   - [1.1][12.99] transcriptional regulator, TetR family (xxxX)
Atu4217   - [2.1][12.99] transcriptional regulator, TetR family (xxxX)
Atu2549   - [1.1][12.99] transcriptional regulator, TetR family (ameR)
Atu3075   - [2.1][12.99] transcriptional regulator, TetR family (xxxX)
Atu3115   - [2.1][12.99] transcriptional regulator, TetR family (xxxX)

Family 2

Atu0260     - [1.1][5.99] aldo-keto reductase (xxxX)
Atu3528    - [2.1][5.99] oxidoreductase (xxxX)
Atu1093    - [1.1][5.99] aldo/keto reductase (xxxX)
Atu1524   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0867   - [1.1][5.99] aldo/keto reductase (xxxX)
Atu3438   - [2.1][5.99] aldo/keto reductase (mocA)
Atu5198   - [3.1][5.99] aldo/keto reductase (mocA)
Atu2816   - [1.1][5.99] oxidoreductase (xxxX)
Atu3278   - [2.1][5.99] aryl-alcohol dehydrogenase (xxxX)
Atu4590   - [2.1][5.99] oxidoreductase (mocA)
Atu2032   - [1.1][5.99] aldo/keto reductase (xxxX)
Atu0263   - [1.1][5.99] oxidoreductase (xxxX)
Atu3809   - [2.1][5.99] oxidoreductase (xxxX)
Atu3816   - [2.1][5.99] D-threo-aldose 1-dehydrogenase (fdh)
Atu3877   - [2.1][5.99] aldo-keto reductase (xxxX)
Atu4294   - [2.1][5.99] oxidoreductase (yafB)
Atu4876   - [2.1][5.99] oxidoreductase (mocA)
Atu4868   - [2.1][5.99] oxidoreductase (mocA)

Family 2636

Atu5411    - [3.1][8.11] ABC transporter, substrate binding protein (xxxX)
Atu5420    - [3.1][8.11] ABC transporter, substrate binding protein [putrescine] (potF)
Atu0609   - [1.1][8.11] ABC transporter, substrate binding protein [putrescine] (potF)
Atu4577   - [2.1][8.11] ABC transporter, substrate binding protein (xxxX)
Atu0407   - [1.1][8.11] ABC transporter, substrate binding protein [iron] (fbpA)
Atu2147   - [1.1][8.11] ABC transporter, substrate binding protein (xxxX)
Atu2014   - [1.1][8.11] ABC transporter, substrate binding protein (xxxX)
Atu2467   - [1.1][8.11] ABC transporter, substrate binding protein [iron] (xxxX)
Atu0202   - [1.1][8.11] ABC transporter, substrate binding protein [iron] (xxxX)
Atu4243   - [2.1][8.11] ABC transporter, substrate binding protein [polyamine] (xxxX)
Atu5129   - [3.1][17.6] ABC transporter, substrate binding protein [mannopine] (attC)
Atu4421   - [2.1][8.11] ABC transporter, substrate binding protein [spermidine/putrescine] (xxxX)
Atu2561   - [1.1][8.11] ABC transporter, substrate binding protein [molybdate] (modA)
Atu3088   - [2.1][8.11] ABC transporter, substrate binding protein [spermidine/putrescine] (xxxX)
Atu4784   - [2.1][8.11] ABC transporter, substrate binding protein [iron] (afuA)
Atu4783   - [2.1][8.11] ABC transporter, substrate binding protein [iron] (afuA)

Family 1470

Atu3495    - [2.1][12.99] GGDEF family protein (xxxX)
Atu2091    - [1.1][12.99] GGDEF family protein (xxxX)
Atu4692    - [2.1][12.99] GGDEF family protein (xxxX)
Atu1207    - [1.1][12.99] GGDEF family protein (xxxX)
Atu2226   - [1.1][12.99] GGDEF family protein (xxxX)
Atu0701   - [1.1][12.99] GGDEF family protein (xxxX)
Atu5372   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu4490   - [2.1][12.99] GGDEF family protein (xxxX)
Atu1257   - [1.1][12.99] GGDEF family protein (xxxX)
Atu1114   - [1.1][12.99] GGDEF family protein (xxxX)
Atu2179   - [1.1][12.99] GGDEF family protein (xxxX)
Atu3207   - [2.1][12.99] GGDEF family protein (xxxX)
Atu3244   - [2.1][12.99] GGDEF family protein (xxxX)
Atu4628   - [2.1][12.99] GGDEF family protein (xxxX)
Atu4353   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu2691   - [1.1][12.99] GGDEF family protein (xxxX)

Family 1293

Atu0852    - [1.1][12.99] transcriptional regulator, MarR family (xxxX)
Atu1085    - [1.1][12.99] transcriptional regulator, MarR family (slyA)
Atu4504    - [2.1][12.99] transcriptional regulator, MarR family (xxxX)
Atu0846    - [1.1][12.99] transcriptional regulator, MarR family (xxxX)
Atu0109    - [1.1][12.99] transcriptional regulator, MarR family (xxxX)
Atu1422   - [1.1][12.99] transcriptional regulator, MarR family (xxxX)
Atu5211   - [3.1][12.99] transcriptional regulator, MarR family (xxxX)
Atu5273   - [3.1][12.99] transcriptional regulator, MarR family (xxxX)
Atu3193   - [2.1][12.99] transcriptional regulator, MarR family (xxxX)
Atu2532   - [1.1][12.99] transcriptional regulator, MarR family (xxxX)
Atu2354   - [1.1][12.99] transcriptional regulator, MarR family (xxxX)
Atu0272   - [1.1][12.99] transcriptional regulator, MarR family (pecS)
Atu5064   - [3.1][12.99] transcriptional regulator, MarR family (xxxX)
Atu2665   - [1.1][12.99] transcriptional regulator, MarR family (xxxX)
Atu4864   - [2.1][12.99] transcriptional regulator, MarR family (xxxX)

Family 607

Atu4507    - [2.1][5.99] dehydrogenase (xxxX)
Atu5222    - [3.1][5.99] 2-hydroxyacid dehydrogenase (xxxX)
Atu4691    - [2.1][5.99] 2-hydroxyacid dehydrogenase (xxxX)
Atu0077   - [1.1][5.99] D-isomer specific 2-hydroxyacid dehydrogenases family protein (xxxX)
Atu1400   - [1.1][1.6] phosphoglycerate dehydrogenase (serA)
Atu5399   - [3.1][1.6] phosphoglycerate dehydrogenase (serA)
Atu3399   - [2.1][5.99] 2-hydroxyacid dehydrogenase (xxxX)
Atu5474   - [3.1][5.99] 2-hydroxyacid dehydrogenase (xxxX)
Atu5333   - [3.1][5.99] 2-hydroxyacid dehydrogenase (xxxX)
Atu5328   - [3.1][1.6] phosphoglycerate dehydrogenase (serA)
Atu3870   - [2.1][7.7] D-lactate dehydrogenase (ldhA)
Atu4048   - [2.1][7.7] 2-hydroxyacid dehydrogenase (xxxX)
Atu3027   - [2.1][5.99] dehydrogenase (xxxX)
Atu3109   - [2.1][1.6] 2-hydroxyacid-family dehydrogenase (xxxX)

Family 1688

Atu3972   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu0530   - [1.1][7.13] UDP-galactose 4-epimerase (galE)
Atu5463   - [3.1][7.13] UDP-glucose 4-epimerase (galE)
Atu3316   - [2.1][13.4] dTDP-glucose 4-6-dehydratase (xxxX)
Atu3315   - [2.1][7.13] UDP-glucose 4-epimerase (galE)
Atu1965   - [1.1][13.4] UDP-glucose 4-epimerase (galE)
Atu4617   - [2.1][13.4] dTDP-D-glucose-4,6-dehydratase (rffB)
Atu4610   - [2.1][13.4] sugar nucleotide epimerase/dehydratase (xxxX)
Atu4148   - [2.1][13.4] UDP-glucuronic acid epimerase (lspL)
Atu4166   - [2.1][13.4] UDP-glucose 4-epimerase (galE)
Atu3143   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu4801   - [2.1][7.13] UDP-glucose 4-epimerase (galE)
Atu4790   - [2.1][13.4] GDP-fucose synthetase (fcl)
Atu4789   - [2.1][2.6] GDP-mannose 4,6-dehydratase (gmd)

Family 1364

Atu1310    - [1.1][3.2] acyl-CoA dehydrogenase (acd)
Atu3477   - [2.1][3.2] acyl-CoA dehydrogenase (acd)
Atu3474   - [2.1][3.2] acyl-CoA dehydrogenase (mmgC)
Atu0732   - [1.1][3.2] acyl-CoA dehydrogenase (mmgC)
Atu1414   - [1.1][3.2] acyl-CoA dehydrogenase (acd)
Atu6072   - [4.1][5.99] thermophilic desulfurizing enzyme (xxxX)
Atu6066   - [4.1][3.2] acyl-CoA dehydrogenase (acd)
Atu3439   - [2.1][3.2] acyl-CoA dehydrogenase (acd)
Atu3431   - [2.1][3.2] acyl-CoA dehydrogenase (acd)
Atu0501   - [1.1][3.2] acyl-CoA dehydrogenase (acd)
Atu5520   - [3.1][3.2] acyl-CoA dehydrogenase (acd)
Atu2530   - [1.1][14.6] oxidoreductase (xxxX)
Atu4418   - [2.1][7.2] glutaryl-CoA dehydrogenase (gcdH)
Atu2572   - [1.1][3.2] acyl-CoA dehydrogenase (acd)

Family 643

Atu0947    - [1.1][12.99] transcriptional regulator, AsnC family (xxxX)
Atu3476   - [2.1][12.99] transcriptional regulator, AsnC family (xxxX)
Atu0740   - [1.1][12.99] transcriptional regulator, AsnC family (xxxX)
Atu3413   - [2.1][12.99] transcriptional regulator, AsnC family (lrp)
Atu1885   - [1.1][12.99] transcriptional regulator, AsnC family (xxxX)
Atu4006   - [2.1][12.99] transcriptional regulator, AsnC family (xxxX)
Atu3291   - [2.1][12.99] transcriptional regulator, Lrp family (xxxX)
Atu2184   - [1.1][12.99] transcriptional regulator, AsnC family (lrp)
Atu3807   - [2.1][12.99] transcriptional regulator, AsnC family (lrp)
Atu4082   - [2.1][12.99] transcriptional regulator, AsnC family (xxxX)
Atu4159   - [2.1][12.99] transcriptional regulator, AsnC family (putR)
Atu4818   - [2.1][12.99] transcriptional regulator, AsnC family (lrp)
Atu4763   - [2.1][12.99] transcriptional regulator, AsnC family (xxxX)

Family 1649

Atu1334    - [1.1][1.2] aspartate transaminase (aspB)
Atu2196    - [1.1][1.2] aspartate aminotransferase A (aatA)
Atu3612   - [2.1][1.4] histidinol-phosphate aminotransferase (hisC)
Atu1011   - [1.1][1.4] histidinol-phosphate aminotransferase (hisC)
Atu1848   - [1.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu0529   - [1.1][1.2] aspartate aminotransferase (aspB)
Atu2810   - [1.1][4.4] cobalamin biosynthetic protein (cobC)
Atu2015   - [1.1][5.99] aminotransferase (xxxX)
Atu1589   - [1.1][5.99] aminotransferase, class I (xxxX)
Atu0235   - [1.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu4278   - [2.1][1.2] aspartate aminotransferase A (aatA)
Atu4266   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)
Atu4760   - [2.1][12.99] transcriptional regulator, GntR family (xxxX)

Family 824

Atu1002    - [1.1][4.1] adenosylmethionine-8-amino-7-oxononanoate aminotransferase (bioA)
Atu3407   - [2.1][5.99] aminotransferase, class III (xxxX)
Atu3329   - [2.1][4.1] adenosylmethionine-8-amino-7-oxononanoate aminotransferase (bioA)
Atu4000   - [2.1][4.1] adenosylmethionine-8-amino-7-oxononanoate aminotransferase (bioA)
Atu3300   - [2.1][4.1] aminotransferase (xxxX)
Atu0428   - [1.1][1.3] acetylornithine aminotransferase (argD)
Atu5251   - [3.1][5.99] pyridoxal phosphate aminotransferase (xxxX)
Atu5302   - [3.1][5.99] aminotransferase, class III (xxxX)
Atu5124   - [3.1][4.4] glutamate-1-semialdehyde aminotransferase (atrB)
Atu3677   - [2.1][15.1] polyketide synthase and peptide synthetase (mcyE)
Atu4802   - [2.1][4.4] glutamate-1-semialdehyde 2,1-aminotransferase (hemL)
Atu4761   - [2.1][4.1] adenosylmethionine-8-amino-7-oxononanoate aminotransferase (bioA)

Family 1030

Atu0157    - [1.1][8.11] ABC transporter, substrate binding protein (xxxX)
Atu6059    - [4.1][8.11] ABC transporter, substrate binding protein [nitrate/sulfonate] (ssuA)
Atu2391   - [1.1][8.3] ABC transporter, substrate binding protein [nitrate/sulfonate/taurine/bicarbonate] (xxxX)
Atu6085   - [4.1][8.2] ABC transporter, substrate binding protein [nitrate/sulfonate] (xxxX)
Atu3448   - [2.1][5.99] dibenzothiophene desulfurization enzyme B (soxB)
Atu3432   - [2.1][5.5] desulfurizing enzyme (xxxX)
Atu1046   - [1.1][8.11] ABC transporter, substrate binding protein (xxxX)
Atu1884   - [1.1][8.11] ABC transporter, substrate binding protein [aliphatic sulfonate] (ssuA)
Atu3287   - [2.1][4.12] thiamine biosynthesis associated protein (xxxX)
Atu4596   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu4262   - [2.1][8.11] ABC transporter, substrate binding protein (xxxX)
Atu4154   - [2.1][8.99] ABC transporter, substrate binding protein [aliphatic sulfonate] (xxxX)

Family 97

Atu1170    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3460   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu0866   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0879   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu5358   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu1864   - [1.1][8.99] homoserine/homoserine lactone efflux protein (rhtB)
Atu0313   - [1.1][16.2] conserved hypothetical protein, with conserved membrane domain (xxxX)
Atu4268   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu2633   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2669   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2116   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 3079

Atu0474     - [1.1][10.5] ECF family sigma factor (xxxX)
Atu1485   - [1.1][10.5] ECF family sigma factor (prtI)
Atu3387   - [2.1][10.5] sigma factor (pfrI)
Atu5490   - [3.1][10.5] ECF family sigma factor (ecfR)
Atu5283   - [3.1][10.5] ECF family sigma factor (xxxX)
Atu5309   - [3.1][10.5] ECF family sigma factor (xxxx)
Atu2030   - [1.1][10.5] ECF family sigma factor (xxxx)
Atu1982   - [1.1][10.5] sigma factor (sigK)
Atu2268   - [1.1][10.5] ECF family sigma factor (SigD)
Atu4160   - [2.1][10.5] ECF family sigma factor (xxxX)
Atu3084   - [2.1][10.5] ECF family sigma factor (sigW)

Family 1738

Atu3445   - [2.1][7.99] hippurate hydrolase (xxxX)
Atu3419   - [2.1][1.6] hippurate hydrolase (xxxX)
Atu3374   - [2.1][5.99] amidohydrolase (xxxX)
Atu3398   - [2.1][1.3] acetylornithine deacetylase (argE)
Atu5479   - [3.1][1.3] acetylornithine deacetylase (argE)
Atu3303   - [2.1][13.4] cellulose synthesis protein (celE)
Atu0370   - [1.1][1.2] succinyl-diaminopimelate desuccinylase (dapE)
Atu2732   - [1.1][1.6] hippurate hydrolase (hipO)
Atu4444   - [2.1][1.6] hippurate hydrolase (xxxX)
Atu4428   - [2.1][5.99] amidohydrolase (xxxX)
Atu3635   - [2.1][7.2] amidohydrolase (xxxX)

Family 1468

Atu0114    - [1.1][12.2] two component response regulator (dctD)
Atu1448   - [1.1][12.2] two component response regulator (ntrX)
Atu1446   - [1.1][12.2] two component response regulator (ntrC)
Atu5377   - [3.1][12.2] two component sensor kinase (xxxX)
Atu5375   - [3.1][12.2] two component sensor kinase (xxxX)
Atu5528   - [3.1][12.2] two component sensor kinase (xxxX)
Atu3296   - [2.1][12.2] two component response regulator for C4-dicarboxylate transport (dctD)
Atu1988   - [1.1][12.2] two component sensor kinase (exsG)
Atu1984   - [1.1][12.2] two component sensor kinase (fsrR)
Atu5087   - [3.1][12.2] two component sensor kinase (exsG)
Atu3764   - [2.1][12.1] sigma 54 dependent transcriptional activator (xxxX)

Family 52

Atu2393     - [1.1][8.4] Acr family transporter (xxxX)
Atu2054    - [1.1][8.4] AcrB/AcrD/AcrF family protein (xxxX)
Atu3795    - [2.1][8.7] AcrB/AcrD/AcrF family protein (xxxX)
Atu5381   - [3.1][8.7] AcrB/AcrD/AcrF family protein (xxxX)
Atu3274   - [2.1][8.7] AcrB/AcrD/AcrF family protein (xxxX)
Atu3202   - [2.1][14.6] RND multidrug efflux transporter (acrB)
Atu2483   - [1.1][8.7] AcrB/AcrD/AcrF family protein (mexF)
Atu4636   - [2.1][8.7] AcrB/AcrD/AcrF family protein (xxxX)
Atu4219   - [2.1][8.4] cation efflux system protein (xxxX)
Atu2551   - [1.1][14.6] acriflavin resistance protein B (acrB)

Family 3202

Atu2435    - [1.1][5.99] acetyltranferase (xxxX)
Atu5380   - [3.1][5.99] acetyltransferase (xxxX)
Atu0785   - [1.1][11.5] ribosomal-protein (S5)-alanine N-acetyltransferase (rimJ)
Atu2041   - [1.1][5.99] acetyltransferase (xxxX)
Atu2782   - [1.1][5.99] acetyltransferase (xxxX)
Atu2783   - [1.1][5.99] acetyltransferase (xxxX)
Atu4255   - [2.1][16.2] conserved hypothetical protein (atsA)
Atu3650   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu4896   - [2.1][5.99] acetyltransferase (xxxX)
Atu4764   - [2.1][5.99] acetyltransferase (xxxX)

Family 279

Atu2428    - [1.1][13.4] exopolysaccharide production protein PssB (pssB)
Atu0694   - [1.1][12.99] inositol monophosphatase family protein (xxxX)
Atu1856   - [1.1][12.99] inositol monophosphatase family protein (xxxX)
Atu1857   - [1.1][12.99] inositol monophosphatase family protein (xxxX)
Atu4573   - [2.1][12.99] inositol monophosphatase family protein (xxxX)
Atu6145   - [4.1][7.13] arabinose phosphate phosphatase (accG)
Atu6196   - [4.1][3.99] arabinose phosphate phosphatase (accG)
Atu3885   - [2.1][12.99] inositol monophosphatase family protein (xxxX)
Atu3748   - [2.1][12.1] extragenic suppressor protein SuhB (suhB)
Atu4787   - [2.1][12.99] inositol monophosphatase family protein (xxxX)

Family 1672

Atu3166    - [2.1][7.13] fructokinase (scrK)
Atu0079   - [1.1][5.99] pfkB family carbohydrate kinase (xxxX)
Atu1875   - [1.1][7.13] carbohydrate kinase (xxxX)
Atu0401   - [1.1][7.13] fructokinase (scrK)
Atu0364   - [1.1][7.13] ribokinase (rbsK)
Atu2509   - [1.1][7.13] sugar kinase (xxxX)
Atu2296   - [1.1][7.11] 2-dehydro-3-deoxygluconokinase (kdgK)
Atu4649   - [2.1][7.13] carbohydrate kinase (xxxX)
Atu3068   - [2.1][7.13] ribokinase (xxxX)
Atu4847   - [2.1][7.13] ribokinase (rbsk)

Family 1453

Atu3960   - [2.1][1.2] dihydrodipicolinate synthase (dapA)
Atu0899   - [1.1][1.2] dihydrodipicolinate synthase (dapA)
Atu5394   - [3.1][1.2] dihydrodipicolinate synthase (dapA)
Atu1024   - [1.1][1.2] dihydrodipicolinate synthase (dapA)
Atu5457   - [3.1][1.2] dihydrodipicolinate synthase (dapA)
Atu2503   - [1.1][1.2] dihydrodipicolinate synthase (dapA)
Atu4675   - [2.1][1.2] dihydrodipicolinate synthase (dapA)
Atu4189   - [2.1][1.2] dihydropicolinate synthase (dapA)
Atu5067   - [3.1][1.2] dihydrodipicolinate synthase (dapA)
Atu3140   - [2.1][1.2] 5-dehydro-4-deoxyglucarate dehydratase (xxxX)

Family 3484

Atu0062   - [1.1][12.99] transcriptional regulator, ROK family (frcR)
Atu3577   - [2.1][12.1] transcriptional regulator (xxxX)
Atu4576   - [2.1][12.99] transcriptional regulator, ROK family (xxxX)
Atu4567   - [2.1][12.99] transcriptional regulator, ROK family (xxxX)
Atu3240   - [2.1][12.99] transcriptional regulator, ROK family (xxxX)
Atu4655   - [2.1][12.99] transcriptional regulator, ROK family (xylR)
Atu0184   - [1.1][7.8] glucokinase (glk)
Atu4207   - [2.1][12.99] transcriptional regulator, ROK family (xxxX)
Atu2609   - [1.1][12.99] transcriptional regulator, ROK family (xxxX)

Family 2878

Atu3466   - [2.1][12.99] transcriptional regulator, ArsR family (xxxX)
Atu1492   - [1.1][12.99] transcriptional regulator, ArsR family (xxxX)
Atu2187   - [1.1][12.99] transcriptional regulator, ArsR family (xxxX)
Atu5321   - [3.1][12.99] transcriptional regulator, ArsR family (xxxX)
Atu2034   - [1.1][12.99] transcriptional regulator, ArsR family (xxxX)
Atu2028   - [1.1][12.99] transcriptional regulator, ArsR family (xxxX)
Atu2278   - [1.1][12.99] transcriptional regulator, ArsR family (nolR)
Atu1629   - [1.1][12.99] transcriptional regulator, ArsR family (xxxX)
Atu3011   - [2.1][12.99] transcriptional regulator, arsR family (xxxX)

Family 274

Atu2414     - [1.1][8.11] ABC transporter, substrate binding protein [urea/amide] (xxxX)
Atu2422    - [1.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu1413   - [1.1][8.11] ABC transporter, substrate binding protein [branched chain amino acid] (xxxX)
Atu1838   - [1.1][8.11] ABC transporter, substrate binding protein [amino acid] (xxxX)
Atu5529   - [3.1][12.2] two component sensor kinase (amiC)
Atu5531   - [3.1][8.11] ABC transporter, substrate binding protein (xxxX)
Atu4519   - [2.1][8.11] ABC transporter, substrate binding protein [branched amino acid] (livJ)
Atu2276   - [1.1][8.11] ABC transporter, substrate binding protein [branched chain amino acid] (braC)
Atu4123   - [2.1][8.11] ABC transporter, substrate binding protein [branched chain amino acid] (xxxX)

Family 2409

Atu3368   - [2.1][8.11] periplasmic mannitol-binding protein (xxxX)
Atu3260   - [2.1][8.11] ABC transporter, substrate binding protein [C4-dicarboxylate] (xxxX)
Atu5268   - [3.1][8.11] ABC transporter, substrate binding protein [C4 dicarboxylate] (dctP)
Atu3253   - [2.1][8.11] ABC transporter, substrate binding protein [C4-dicarboxylate] (xxxX)
Atu2744   - [1.1][8.11] C4-dicarboxylate binding protein (xxxX)
Atu0249   - [1.1][8.11] ABC transporter, substrate binding protein [sugar] (xxxX)
Atu3137   - [2.1][8.11] C4-dicarboxylate-binding protein (xxxX)
Atu3158   - [2.1][8.11] ABC transporter, substrate binding protein [C4-dicarboxylate] (xxxX)
Atu4826   - [2.1][8.11] ABC transporter, substrate binding protein [C4-dicarboxylate] (xxxX)

Family 1730

Atu3389   - [2.1][8.4] ABC transporter, membrane spanning protein [iron] (xxxX)
Atu3395   - [2.1][8.4] ABC transporter, membrane spanning protein [iron (III)] (xxxX)
Atu5314   - [3.1][8.4] ABC transporter, membrane spanning protein [iron] (fepD)
Atu5315   - [3.1][8.4] ABC transporter, membrane spanning protein [iron] (fepG)
Atu2459   - [1.1][8.4] ABC transporter, membrane spanning protein [hemin] (hmuU)
Atu2474   - [1.1][8.4] ABC transporter, membrane spanning protein (xxxX)
Atu2475   - [1.1][8.4] ABC transporter, membrane spanning protein (xxxX)
Atu3689   - [2.1][8.4] ABC transporter, membrane spanning protein [iron(III) dicitrate] (fecC)
Atu3690   - [2.1][8.4] ABC transporter, membrane spanning protein [iron (III) dicitrate] (fecD)

Family 1277

Atu1406   - [1.1][5.99] isomerase/lactonizing enzyme (xxxX)
Atu3453   - [2.1][5.99] isomerase/lactonizing enzyme (xxxX)
Atu5458   - [3.1][5.99] isomerase/lactonizing enzyme (xxxX)
Atu2811   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0270   - [1.1][5.99] mandelate racemase / muconate lactonizing enzyme family protein (xxxX)
Atu4196   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu4120   - [2.1][5.99] mandelate racemase (xxxX)
Atu3029   - [2.1][5.99] glucarate dehydratase (gudD)
Atu3139   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 1139

Atu1296    - [1.1][12.2] two component response regulator (divK)
Atu3603   - [2.1][12.2] two component response regulator (xxxX)
Atu0520   - [1.1][14.13] CheY homolog (cheY2)
Atu0516   - [1.1][14.13] cheY homolog (cheY1)
Atu1989   - [1.1][12.2] two component response regulator (xxxX)
Atu1985   - [1.1][12.2] two component response regulator (xxxX)
Atu3883   - [2.1][12.2] chemotaxis response regulator (xxxX)
Atu4306   - [2.1][12.2] two component response regulator (xxxX)
Atu4773   - [2.1][12.2] two component response regulator (xxxX)

Family 447

Atu0836    - [1.1][5.99] Glutathione-S-transferase (gst)
Atu0835    - [1.1][5.99] glutathione S-transferase (gst)
Atu1394   - [1.1][5.99] glutathione S-transferase (xxxX)
Atu1871   - [1.1][5.99] glutathione S-transferase (gst)
Atu3585   - [2.1][5.99] glutathione S-transferase (xxxX)
Atu5272   - [3.1][5.99] glutathione S-transferase (xxxX)
Atu5150   - [3.1][17.6] glutathione S-transferase (attY)
Atu3701   - [2.1][15.1] glutathione S-transferase (xxxX)

Family 393

Atu3800    - [2.1][8.11] ABC transporter, substrate binding protein [proline/glycine betaine] (proX)
Atu2060    - [1.1][8.11] ABC transporter, substrate binding protein [glycine betaine] (xxxX)
Atu5220    - [3.1][8.1] ABC transporter, nucleotide binding/ATPase protein [glycine betaine/L-proline] (proX)
Atu3957   - [2.1][8.11] ABC transporter, substrate binding protein [glycine-betaine] (xxxX)
Atu0895   - [1.1][8.11] ABC transporter, substrate binding protein (xxxX)
Atu2281   - [1.1][8.11] ABC transporter, substrate binding protein [proline/glycine betaine] (xxxX)
Atu4647   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu4046   - [2.1][8.11] ABC transporter, substrate binding protein [glycine betaine] (xxxX)

Family 2011

Atu3367   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu3261   - [2.1][8.3] ABC transporter, membrane spanning protein [C4-dicarboxylate] (xxxX)
Atu5269   - [3.1][8.3] permease component of C4 dicarboxylate transporter (xxxX)
Atu3255   - [2.1][8.3] ABC transporter, membrane spanning protein [dicarboxylate] (xxxX)
Atu2743   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3135   - [2.1][8.3] ABC transporter, membrane spanning protein [C4-dicarboxylate] (xxxX)
Atu3156   - [2.1][8.3] ABC transporter, membrane spanning protein [C4-dicarboxylate] (xxxX)
Atu4827   - [2.1][8.3] ABC transporter, membrane spanning protein [C4-dicarboxylate] (xxxX)

Family 4247

Atu0493    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3423   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu0819   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0201   - [1.1][16.2] conserved hypothetical protein (aau3)
Atu4299   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu3666   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu3668   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 2122

Atu0719    - [1.1][14.3] streptogramin A acetyl transferase (attR)
Atu0304   - [1.1][5.6] nodulation protein L (nodL)
Atu1146   - [1.1][5.99] acetyl transferase (xxxX)
Atu0175   - [1.1][14.3] acetyltransferase (xxxX)
Atu5143   - [3.1][17.6] transacetylase (attR)
Atu4814   - [2.1][13.4] acetyltransferase (bme4)
Atu4738   - [2.1][14.6] chloramphenicol acetyltransferase (cat)

Family 14

Atu0912     - [1.1][8.4] Na+/H+ antiporter (mnhD)
Atu1281     - [1.1][7.5] NADH ubiquinone oxidoreductase chain L (nuoL)
Atu1282     - [1.1][7.5] NADH dehydrogenase I chain M (nuoM)
Atu1283     - [1.1][7.5] NADH ubiquinone oxidoreductase chain N (nuoN)
Atu0909   - [1.1][8.4] Na+/H+ antiporter (mnhA)
Atu0512   - [1.1][8.4] pH adaption potassium efflux system protein (phaA)
Atu0510   - [1.1][8.4] pH adaption potassium efflux system protein (phaD)

Family 117

Atu0669    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0845    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0844    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0048   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu5196   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu3331   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu2336   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 76

Atu6138    - [4.1][12.1] transcriptional regulator (accR)
Atu5243    - [3.1][12.99] transcriptional regulator, DeoR family (xxxX)
Atu3486   - [2.1][12.99] transcriptional regulator, DeoR family (xxxX)
Atu2725   - [1.1][12.99] transcriptional regulator, DeoR family (xxxX)
Atu3898   - [2.1][12.99] transcriptional regulator, DeoR family (glpR)
Atu4841   - [2.1][12.99] transcriptional regulator, DeoR family (deoR)

Family 739

Atu1320    - [1.1][5.99] acetyltransferase (xxxX)
Atu1322    - [1.1][5.99] acetyltransferase (xxxX)
Atu1326    - [1.1][5.99] acetyltransferase (xxxX)
Atu2231   - [1.1][5.99] acetyltransferase (xxxX)
Atu3996   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu2662   - [1.1][5.99] acetyltransferase (xxxX)

Family 699

Atu3913    - [2.1][5.99] biotin carboxylase (xxxX)
Atu2089    - [1.1][13.3] D-alanine:D-alanine ligase (ddl)
Atu1330    - [1.1][3.1] acetyl-CoA carboxylase, biotin carboxylase (accC)
Atu3479   - [2.1][7.2] 3-methylcrotonyl-CoA carboxylase alpha subunit (mccA)
Atu3581   - [2.1][7.99] propionyl-coenzyme A carboxylase, alpha polypeptide (pccA)
Atu4273   - [2.1][3.1] acetyl-CoA carboxylase, biotin carboxylase (accC)

Family 682

Atu1362    - [1.1][12.2] Two component sensor kinase (cckA)
Atu0343   - [1.1][12.2] two component sensor kinase/response regulator hybrid (barA)
Atu5509   - [3.1][12.2] two component sensor kinase/response regulator hybrid (xxxX)
Atu4047   - [2.1][12.2] two component sensor kinase/response regulator hybrid (cvgS)
Atu4805   - [2.1][12.2] two component sensor kinase/response regulator hybrid (xxxX)
Atu4775   - [2.1][12.2] two component sensor kinase (nwsA)

Family 642

Atu0948    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0997    - [1.1][16.2] Conserved Hypothetical Protein (xxxX)
Atu0863   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu5437   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu2000   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu5151   - [3.1][17.6] regulatory protein, ArsR family (attZ)

Family 598

Atu5414    - [3.1][11.2] proline dipeptidase (pepQ)
Atu2216    - [1.1][11.2] Xaa-Pro dipeptidase (pepQ)
Atu5477   - [3.1][11.2] peptidase (xxxX)
Atu4112   - [2.1][11.2] proline dipeptidase (xxxX)
Atu3146   - [2.1][11.2] proline dipeptidase (xxxX)
Atu4757   - [2.1][11.2] Xaa-Pro dipeptidase (pepQ)

Family 3988

Atu2372   - [1.1][13.4] UDP-hexose transferase (exoU)
Atu4614   - [2.1][13.4] glycosyltransferase (wbbL)
Atu4613   - [2.1][13.4] glycosyltransferase (xxxX)
Atu4051   - [2.1][13.4] succinoglycan biosynthesis glycosyltransferase (exoO)
Atu4060   - [2.1][13.4] succinoglycan biosynthesis glycosyltransferase (exoU)
Atu4806   - [2.1][13.4] glycosyltransferase (pssF)

Family 385

Atu5000    - [3.1][15.4] replication protein A (repA)
Atu6043    - [4.1][15.4] replication protein A (repA)
Atu3924   - [2.1][9.2] replication protein A (repA)
Atu2829   - [1.1][15.4] chromosome partitioning protein (parA)
Atu2136   - [1.1][15.4] chromosome partitioning protein (ParA)
Atu6180   - [4.1][17.99] virA/G regulated protein (virC1)

Family 299

Atu3793    - [2.1][1.2] L-aspartase (aspA)
Atu3599   - [2.1][1.3] argininosuccinate lyase (argH)
Atu1841   - [1.1][2.3] adenylosuccinate lyase (purB)
Atu4538   - [2.1][5.99] 3-carboxy-cis,cis-muconate cycloisomerase (pcaB)
Atu4651   - [2.1][1.3] argininosuccinate lyase (argH)
Atu1616   - [1.1][7.14] fumarate hydratase (fumC)

Family 283

Atu3916    - [2.1][8.99] exogenous ferric siderophore receptor (bfrA)
Atu4022    - [2.1][8.4] hydroxamate-type ferrisiderophore receptor (fhuA)
Atu0409   - [1.1][8.99] ferrichrome iron receptor (xxxX)
Atu5311   - [3.1][8.4] TonB-dependent receptor (xxxX)
Atu2287   - [1.1][13.6] outer membrane heme receptor (xxxX)
Atu3687   - [2.1][8.4] TonB-dependent receptor (xxxX)

Family 2638

Atu0405   - [1.1][3.1] long-chain-fatty-acid-CoA-ligase (fadD)
Atu2745   - [1.1][3.1] acetyl-coenzyme A synthetase (acs)
Atu1672   - [1.1][3.2] long-chain fatty acid-CoA ligase (fadD)
Atu4130   - [2.1][3.2] acetoacetyl-CoA synthetase (acsA)
Atu3673   - [2.1][14.6] polyketide synthetase (xxxX)
Atu4822   - [2.1][3.2] fatty acid CoA ligase (xxxX)

Family 2177

Atu2416     - [1.1][1.3] glutamine synthetase II (glnA)
Atu0602   - [1.1][1.3] glutamine synthetase (glnA)
Atu1770   - [1.1][1.3] glutamine synthetase I (glnA)
Atu2142   - [1.1][1.3] glutamine synthetase (glnA)
Atu0193   - [1.1][1.3] glutamine synthetase (glnA)
Atu4230   - [2.1][1.3] glutamine synthetase III (glnA)

Family 1598

Atu4453   - [2.1][7.13] ribitol kinase (xxxX)
Atu4482   - [2.1][7.13] xylulokinase (xylB)
Atu1903   - [1.1][7.99] glycerol kinase 2 (glpK)
Atu3874   - [2.1][7.13] L-xylulose kinase (lyxK)
Atu3890   - [2.1][7.99] glycerol kinase (glpK)
Atu4324   - [2.1][7.13] ribitol kinase (xxxX)

Family 1420

Atu0763   - [1.1][5.99] hydrolase (xxxX)
Atu1472   - [1.1][5.99] hydrolase (xxxX)
Atu4452   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu0790   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3251   - [2.1][5.99] haloacid dehalogenase-like hydrolase (xxxX)
Atu1614   - [1.1][7.99] phosphoglycolate phosphatase (gph)

Family 1182

Atu3159    - [2.1][7.2] 3-hydroxyisobutyrate dehydrogenase (mmsB)
Atu1526   - [1.1][7.10] phosphogluconate dehydrogenase, decarboxylating (gnd)
Atu2737   - [1.1][5.99] oxidoredutase (xxxX)
Atu4085   - [2.1][7.7] 2-HYDROXY-3-OXOPROPIONATE REDUCTASE (garR)
Atu4129   - [2.1][7.2] 3-hydroxyisobutyrate dehydrogenase (mmsB)
Atu4834   - [2.1][7.10] 6-phosphogluconate dehydrogenase (xxxX)

Family 1164

Atu4708    - [2.1][7.3] formate dehydrogenase alpha subunit (fdhF)
Atu1548   - [1.1][7.3] formate dehydrogenase H alpha subunit (fdhF)
Atu1136   - [1.1][7.99] reductase (xxxX)
Atu3900   - [2.1][7.3] nitrate reductase large subunit (nasA)
Atu4408   - [2.1][7.3] periplasmic nitrate reductase large subunit (napA)
Atu4776   - [2.1][7.7] formate dehydrogenase alpha subunit (fdhF)

Family 1090

Atu0706   - [1.1][12.99] transcriptional regulator, IclR family (kdgR)
Atu4465   - [2.1][12.1] transcriptional regulator (kdgR)
Atu3264   - [2.1][12.99] transcriptional regulator, IclR family (xxxX)
Atu4546   - [2.1][12.99] transcriptional regulator, IclR family (pcaR)
Atu4599   - [2.1][12.99] transcriptional regulator, IclR family (xxxX)
Atu5136   - [3.1][17.6] transcription regulator, IclR family (attJ)

Family 846

Atu3175    - [2.1][7.2] methionine gamma-lyase (mdeA)
Atu1251   - [1.1][1.6] O-acetylhomoserine sulfhydrylase (cysD)
Atu0432   - [1.1][5.2] O-succinylhomoserine sulfhydrylase (xxxX)
Atu1575   - [1.1][1.2] cystathionine beta lyase (metC)
Atu3806   - [2.1][7.2] methionine gamma-lyase (mdeA)

Family 772

Atu0106    - [1.1][14.2] cold shock protein (cspA)
Atu2200    - [1.1][14.2] cold shock protein (cspA)
Atu5513   - [3.1][14.2] cold shock protein (cspA)
Atu4214   - [2.1][14.2] cold shock protein (cspA)
Atu3121   - [2.1][14.2] cold shock protein (cspA)

Family 651

Atu3915    - [2.1][12.99] transcriptional regulator, MerR family (soxR)
Atu0938    - [1.1][12.99] transcriptional regulator, MerR family (cueR)
Atu1197    - [1.1][12.99] transcriptional regulator, MerR family (cueR)
Atu1546   - [1.1][12.99] transcriptional regulator, MerR family (xxxX)
Atu0888   - [1.1][12.99] transcriptional regulator, MerR family (xxxX)

Family 506

Atu0150    - [1.1][3.1] 3-oxoacyl-(acyl-carrier-protein) synthase I (fabB)
Atu1097   - [1.1][3.1] 3-oxoacyl-(acyl carrier protein) synthase II (fabF)
Atu1596   - [1.1][3.1] 3-oxoacyl-(acyl-carrier-protein) synthase II (fabF)
Atu1597   - [1.1][3.1] 3-oxoacyl-(acyl-carrier-protein) synthase II (fabF)
Atu4216   - [2.1][3.1] 3-oxoacyl-(acyl-carrier-protein) synthase II (fabF)

Family 467

Atu3505    - [2.1][3.2] enoyl-CoA hydratase (xxxX)
Atu3481   - [2.1][5.99] Enoyl-CoA hydratase/isomerase family protein (xxxX)
Atu0733   - [1.1][3.2] enoyl-CoA hydratase/isomerase (xxxX)
Atu1417   - [1.1][3.2] enoyl-CoA hydratase (fad)
Atu0322   - [1.1][3.2] enoyl CoA hydratase (fadB)

Family 439

Atu3789    - [2.1][8.4] potassium-transporting ATPase B chain (kdpB)
Atu0843    - [1.1][8.4] P type cation (metal) transporter, ATPase component (xxxX)
Atu0937    - [1.1][8.4] copper transporting ATPase (xxxX)
Atu1195    - [1.1][8.4] heavy-metal transporting P-type ATPase (xxxX)
Atu1528   - [1.1][5.6] nitrogen fixation protein FixI (fixI)

Family 408

Atu2080    - [1.1][5.99] acetyltransferase (xxxX)
Atu0874   - [1.1][14.6] acetyltransferase (xxxX)
Atu0907   - [1.1][14.6] Phosphinothricin acetyltransferase (xxxX)
Atu2290   - [1.1][5.99] probable acetyltransferase (xxxX)
Atu2343   - [1.1][5.99] acetyltransferase (xxxX)

Family 3160

Atu1217   - [1.1][1.6] cysteine synthase (cysK)
Atu0312   - [1.1][1.6] cysteine synthase (cysK)
Atu2735   - [1.1][1.5] threonine dehydratase (ilvA)
Atu4759   - [2.1][7.2] threonine dehydratase (tdcB)
Atu1205   - [1.1][1.5] threonine dehydratase (ilvA)

Family 315

Atu2395    - [1.1][5.99] metal dependent hydrolase (xxxX)
Atu5547    - [3.1][5.99] metallo-beta-lactamase superfamily protein (xxxX)
Atu0622   - [1.1][5.99] metallo-beta-lactamase superfamily protein (xxxX)
Atu5085   - [3.1][14.6] metallo-beta-lactamase (xxxX)
Atu4307   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 2847

Atu6001   - [4.1][17.8] 5 protein (gene5)
Atu6003   - [4.1][17.8] C' protein (rolB)
Atu6004   - [4.1][17.8] D protein (geneD)
Atu6005   - [4.1][17.8] E protein (geneE)
Atu6009   - [4.1][17.8] gene 5 protein (gene5)

Family 2686

Atu2138   - [1.1][5.99] dehydrogenase (xxxX)
Atu2528   - [1.1][14.3] maleylacetate reductase (macA)
Atu4236   - [2.1][7.99] dehydrogenase (xxxX)
Atu5138   - [3.1][17.6] alcohol dehydrogenase (attL)
Atu5074   - [3.1][7.7] iron alcohol dehydrogenase (attL)

Family 2420

Atu3541   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu1757   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu4357   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu2449   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0252   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 23

Atu2805     - [1.1][4.4] cobalamin synthesis related protein (cobW)
Atu4502    - [2.1][16.2] conserved hypothetical protein (cobW)
Atu3181    - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu3184    - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu3633   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 2048

Atu2377   - [1.1][13.4] succinoglycan biosynthesis transport protein (xxxX)
Atu1239   - [1.1][13.4] succinoglycan biosynthesis transport protein (exoP)
Atu3556   - [2.1][13.4] exopolysaccharide polymerization/transport protein (xxxX)
Atu4049   - [2.1][13.4] exopolysaccharide polymerization/transport protein (exoP)
Atu4794   - [2.1][13.4] polysaccharide biosynthesis protein (bme12)

Family 1471

Atu5370   - [3.1][15.3] transposase (tnp)
Atu4604   - [2.1][15.3] IS3 family transposase (orfB)
Atu4601   - [2.1][15.3] IS426 transposase (orfB)
Atu5027   - [3.1][15.3] IS 426 transposase (orf2)
Atu4890   - [2.1][15.3] IS426 transposase (orfB)

Family 1403

Atu3425   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu3277   - [2.1][4.11] nitrilotriacetate monooxygenase (xxxX)
Atu4581   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu2495   - [1.1][5.99] flavoprotein oxidoreductase (xxxX)
Atu2531   - [1.1][14.6] actinorhodin polyketide dimerase (actI)

Family 131

Atu1434    - [1.1][7.12] dihydrolipoamide dehydrogenase (lpdA)
Atu5537    - [3.1][5.99] pyridine nucleotide-disulphide oxidoreductase (xxxX)
Atu1611   - [1.1][4.3] glutathione reductase (gor)
Atu1661   - [1.1][5.99] soluble pyridine nucleotide transhydrogenase (sthA)
Atu2632   - [1.1][7.12] dihydrolipoamide dehydrogenase (lpdA)

Family 119

Atu0666    - [1.1][5.99] glycolate oxidase subunit (glcE)
Atu2053    - [1.1][5.99] FAD dependent oxidoreductase (xxxX)
Atu0723    - [1.1][5.99] FAD dependent oxidoreductase (xxxX)
Atu0665   - [1.1][5.99] glycolate oxidase subunit (glcD)
Atu2739   - [1.1][5.99] oxidoreductase (xxxX)

Family 1058

Atu3971   - [2.1][1.5] dihydroxy-acid dehydratase (ilvD)
Atu1918   - [1.1][1.5] dihydroxy-acid dehydratase (ilvD)
Atu0598   - [1.1][7.6] phosphogluconate dehydratase (edd)
Atu3219   - [2.1][1.5] dihydroxy-acid dehydratase (ilvD)
Atu2736   - [1.1][1.5] dihydroxy-acid dehydratase (ilvD)

Family 103

Atu6120    - [4.1][9.1] HNS-type DNA binding protein (hupT)
Atu1180    - [1.1][12.1] integration host factor alpha subunit (ihfA)
Atu1262   - [1.1][9.1] DNA-binding protein (xxxX)
Atu0338   - [1.1][9.2] integration host factor, beta subunit (ihfB)
Atu5106   - [3.1][9.1] DNA binding protein (hupT)

Family 850

Atu3179    - [2.1][8.7] ABC transporter, membrane spanning protein (xxxX)
Atu1519   - [1.1][8.4] ABC transporter, membrane spanning protein [zinc] (znuB)
Atu4468   - [2.1][8.4] ABC transporter, membrane spanning protein [iron transport] (sitD)
Atu4469   - [2.1][8.4] ABC transporter, membrane spanning protein [iron] (sitC)

Family 84

Atu1341    - [1.1][13.3] penicillin-binding protein 1a (mrcA)
Atu0931    - [1.1][13.3] penicillin binding protein (xxxX)
Atu0103    - [1.1][13.3] penicillin-binding protein (pbpC)
Atu3694   - [2.1][13.3] penicillin binding protein (pbpC)

Family 787

Atu2706    - [1.1][14.4] HlyD family secretion protein (prsE)
Atu3382   - [2.1][14.4] secretion protein, HlyD family (prsE)
Atu3323   - [2.1][8.99] secretion protein, HlyD family (xxxX)
Atu4414   - [2.1][8.1] ABC transporter, membrane spanning protein [bacteriocin] (rspE)

Family 784

Atu0498    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2702    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu1908   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu1591   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 738

Atu1319    - [1.1][11.1] glutamyl-tRNA amidotransferase subunit A (gatA)
Atu6010   - [4.1][17.8] indole acetamide hydrolase (tms2)
Atu3243   - [2.1][11.1] glutamyl-tRNA amidotransferase subunit A (gatA)
Atu4441   - [2.1][11.1] glutamyl-tRNA amidotransferase subunit A (gatA)

Family 689

Atu2099    - [1.1][13.3] UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase (murE)
Atu2098    - [1.1][13.3] UDP-MurNAc-pentapeptide synthetase (murF)
Atu2096    - [1.1][13.3] UDP-N-acetylmuramoylalanine--D-glutamate ligase (murD)
Atu2093    - [1.1][13.3] UDP-N-acetylmuramate-alanine ligase (murC)

Family 616

Atu5232    - [3.1][11.7] translation initiation inhibitor (xxxX)
Atu3926   - [2.1][11.7] translation initiation inhibitor (xxxX)
Atu1475   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2498   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 5210

Atu1806   - [1.1][16.3] hypothetical protein (xxxX)
Atu1219   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu5450   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu5053   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 516

Atu6041    - [4.1][15.4] conjugal transfer protein (trbB)
Atu5172   - [3.1][15.4] agrobacterium virulence homologue virB11 (avhB11)
Atu6177   - [4.1][17.4] component of type IV secretion system (virB11)
Atu0218   - [1.1][13.2] component of type IV pilus (ctpG)

Family 5115

Atu4183   - [2.1][16.3] hypothetical protein (xxxX)
Atu0056  - [1.1][16.3] hypothetical protein (xxxX)
Atu2543  - [1.1][16.3] hypothetical protein (xxxX)
Atu3940  - [2.1][16.3] hypothetical protein (xxxX)

Family 5071

Atu1994   - [1.1][3.99] acyl-CoA hydrolase (xxxX)
Atu3826   - [2.1][3.99] acyl-CoA hydrolase (xxxX)
Atu3861   - [2.1][3.99] acyl-CoA hydrolase (xxxX)
Atu3825   - [2.1][16.3] hypothetical protein (xxxX)

Family 4945

Atu2541   - [1.1][16.3] hypothetical protein (xxxX)
Atu3942   - [2.1][16.3] hypothetical protein (xxxX)
Atu4185   - [2.1][16.3] hypothetical protein (xxxX)
Atu0058  - [1.1][16.3] hypothetical protein (xxxX)

Family 4545

Atu4615   - [2.1][13.4] glucose-1-phosphate thymidylyltransferase (xxxX)
Atu4050   - [2.1][13.4] UTP-glucose-1-phosphate uridylyltransferase (exoN)
Atu3778   - [2.1][7.13] UTP-glucose-1-phosphate uridylyltransferase (galU)
Atu4797   - [2.1][13.4] glucose-1-phosphate cytidylyltransferase (rfbF)

Family 3818

Atu5028   - [3.1][15.3] IS426 transposase (orf1)
Atu4602   - [2.1][15.3] IS426 transposase (orfA)
Atu4605   - [2.1][15.3] IS3 family transposase (orfA)
Atu4891  - [2.1][15.3] IS 426 transposase (orfA)

Family 362

Atu4511    - [2.1][7.99] acetolactate synthase (iolD)
Atu2128   - [1.1][1.5] acetolactate synthase large subunit (iivG)
Atu2036   - [1.1][1.5] acetolactate synthase III, large subunit (ilvI)
Atu5123   - [3.1][1.6] acetolactate synthase (atrC)

Family 327

Atu1292    - [1.1][9.2] DNA polymerase III, alpha chain (dnaE)
Atu6093   - [4.1][9.2] DNA polymerase III, alpha chain (dnaE)
Atu3228   - [2.1][9.2] DNA-dependent DNA polymerase III alpha chain (xxxX)
Atu5100   - [3.1][9.2] DNA polymerase III, alpha chain (dnaE)

Family 3031

Atu0092    - [1.1][13.5] lytic murein transglycosylase (mltB)
Atu2122   - [1.1][13.5] lytic murein transglycosylase (mltB)
Atu2489   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3779   - [2.1][13.5] murein hydrolase (mltB)

Family 2607

Atu4514   - [2.1][12.99] transcriptional regulator, RpiR family (xxxX)
Atu2145   - [1.1][12.99] transcriptional regulator, RpiR family (xxxX)
Atu5063   - [3.1][12.99] transcriptional regulator, RpiR family (xxxX)
Atu2598   - [1.1][12.99] transcriptional regulator, RpiR family (xxxX)

Family 2361

Atu3314   - [2.1][5.99] cellulose synthase (xxxX)
Atu3309   - [2.1][13.4] cellulose synthase (celA)
Atu5090   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu3056   - [2.1][13.4] beta 1,3 glucan synthase catalytic subunit (xxxX)

Family 2339

Atu5349   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu4100   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu1553   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3775   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 2128

Atu0949    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3447   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu0296   - [1.1][7.1] NADH-ubiquinone oxidoreductase (xxxX)
Atu4301   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 2033

Atu1256   - [1.1][7.5] cytochrome P450 hydroxylase (xxxX)
Atu6150   - [4.1][17.99] P-450 monooxygenase (virH1)
Atu6151   - [4.1][17.99] P-450 monoxygenase (virH2)
Atu1569   - [1.1][7.99] cytochrome P450 (cyc)

Family 184

Atu1070    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu1071    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2404    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu1271   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 1836

Atu5449   - [3.1][14.2] heat-shock protein (ibpA)
Atu0375   - [1.1][14.2] small heat shock protein (hspH)
Atu3887   - [2.1][14.2] small heat shock protein (ibpA)
Atu5052   - [3.1][14.2] small heat shock protein (ibpA)

Family 1808

Atu1505   - [1.1][13.3] penicillin-binding protein (dac)
Atu1499   - [1.1][13.3] penicillin binding protein (dac)
Atu2321   - [1.1][13.3] D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) (xxxX)
Atu3634   - [2.1][14.6] penicillin-binding protein dacf precursor (dacF)

Family 1680

Atu0545   - [1.1][14.13] flagella associated protein (flaA)
Atu0543   - [1.1][14.13] flaB (flaB)
Atu0542   - [1.1][14.13] flagellin (fla)
Atu0567   - [1.1][14.13] flagellin protein FlaD (flaD)

Family 1604

Atu4462   - [2.1][12.1] transcriptional regulator (xxxX)
Atu1904   - [1.1][12.1] transcriptional regulator (xxxX)
Atu3878   - [2.1][12.1] transcriptional regulator (xxxX)
Atu4446   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 1576

Atu2394    - [1.1][12.1] Fnr-like transcriptional activator (xxxX)
Atu1037   - [1.1][5.6] nitrogen fixation regulatory protein (fixK)
Atu1602   - [1.1][12.99] transcriptional activator, crp family (fnrN)
Atu4380   - [2.1][12.99] transcriptional regulatory, crp family (nnrR)

Family 1561

Atu3516    - [2.1][9.2] NTP pyrophosphohydrolase, MutT family (xxxX)
Atu1057   - [1.1][2.2] ADP-Ribose Pyrophosphatase (nudF)
Atu1834   - [1.1][9.2] mutT like protein (xxxX)
Atu3719   - [2.1][9.2] MutT/nudix family protein (mutT)

Family 1551

Atu0659   - [1.1][9.2] NTP pyrophosphohydrolase, MutT family (xxxX)
Atu6146   - [4.1][16.2] conserved hypothetical protein (xxxX)
Atu6194   - [4.1][16.2] conserved hypothetical protein (xxxX)
Atu4635   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 134

Atu6124    - [4.1][15.4] conjugal transfer protein, Dtr system (traG)
Atu6184   - [4.1][17.4] virA/G regulated protein (virD4)
Atu5108   - [3.1][15.4] conjugal transfer protein (traG)
Atu4858   - [2.1][15.4] agrobacteirum virulence homologue virD4 (avhD4)

Family 1205

Atu1794   - [1.1][5.99] 2-octaprenyl-6-methoxyphenol hydroxylase (ubiH)
Atu2755   - [1.1][5.99] FAD-dependent monooxygenase (xxxX)
Atu2610   - [1.1][5.99] FAD-dependent monooxygenase (xxxX)
Atu4770   - [2.1][5.99] FAD-dependent monooxygenase (xxxX)

Family 1072

Atu3475   - [2.1][3.99] acetyl-CoA C-acetyltransferase (xxxX)
Atu0502   - [1.1][3.2] acyl-CoA thiolase (xxxX)
Atu4549   - [2.1][7.99] beta-ketoadipyl CoA thiolase (pcaF)
Atu2769   - [1.1][3.2] acetyl-CoA acetyltransferase (atoB)

Family 1049

Atu3962   - [2.1][16.2] conserved hypothetical protein, eukaryotic regucalcin (xxxX)
Atu0702   - [1.1][15.99] calcium-binding protein, regucalcin (xxxX)
Atu4190   - [2.1][12.1] Ca2+ binding protein (xxxX)
Atu4029   - [2.1][7.10] gluconolactonase precursor (xxxX)

Family 887

Atu4694    - [2.1][14.3] chlorohydrolase (xxxX)
Atu4699    - [2.1][5.99] N-ethylammeline chlorohydrolase (trzA)
Atu2315   - [1.1][2.2] guanine deaminase (gda)

Family 886

Atu4693    - [2.1][8.6] outer membrane protein (xxxX)
Atu1021   - [1.1][8.6] outer membrane protein (xxxX)
Atu1020   - [1.1][8.6] outer membrane protein (xxxX)

Family 849

Atu3178    - [2.1][8.7] ABC transporter, substrate binding protein (xxxX)
Atu1521   - [1.1][8.11] ABC transporter, substrate binding protein [zinc] (znuA)
Atu4471   - [2.1][8.11] ABC transporter, substrate binding protein [iron] (sitA)

Family 80

Atu6134    - [4.1][12.1] transcriptional regulator (traR)
Atu2285   - [1.1][12.99] transcriptional regulator, LuxR family (ahyR)
Atu2727   - [1.1][12.99] transcriptional regulator, LuxR family (xxxX)

Family 768

Atu0101    - [1.1][7.5] cytochrome c (cycM)
Atu4379   - [2.1][7.5] cytochrome c2 (cy2)
Atu4027   - [2.1][7.5] cytochrome c2 (xxxX)

Family 684

Atu5353    - [3.1][15.3] IS3 family transposase (tnp)
Atu4009   - [2.1][15.3] IS3 family transposase (tnp)
Atu2107  - [1.1][15.3] IS3 family transposase (tnp)

Family 63

Atu2443    - [1.1][11.6] pseudouridine synthase homolog (rluD)
Atu1471   - [1.1][11.5] ribosomal large subunit pseudouridine synthase C (rluC)
Atu4041   - [2.1][11.5] ribosomal large subunit pseudouridine synthase A (rluA)

Family 617

Atu5233    - [3.1][7.2] D-serine deaminase (dsd)
Atu3948   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu3927   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 615

Atu5231    - [3.1][5.99] acetyltransferase (xxxX)
Atu3406   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu3397   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 597

Atu5415    - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu4703    - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu1743   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 585

Atu5428    - [3.1][9.2] DNA-damage-inducible protein F (dinF)
Atu2172   - [1.1][8.7] multidrug efflux protein (xxxX)
Atu3669   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 556

Atu0708    - [1.1][8.2] ABC transporter, nucleotide binding/ATPase protein (nrt)
Atu3905   - [2.1][8.2] ABC transporter, substrate binding protein [nitrate] (nrtA)
Atu3906   - [2.1][8.2] ABC transporter, nucleotide binding/ATPase protein [nitrate] (nrtC)

Family 522

Atu6047    - [4.1][16.2] conserved hypothetical protein (xxxX)
Atu4015    - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu5016   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 5

Atu5473     - [3.1][1.5] D-alanine aminotransferase (dat)
Atu0871   - [1.1][1.5] branched-chain-amino-acid transaminase (ilvE)
Atu2511   - [1.1][1.5] D-alanine aminotransferase (dat)

Family 482

Atu1346    - [1.1][14.6] phenazine antibiotic biosynthesis related protein (xxxX)
Atu6056    - [4.1][14.6] Phenazine biosynthesis protein (phzF)
Atu4269   - [2.1][14.6] phenazine biosynthesis protein (phzC)

Family 481

Atu1347    - [1.1][14.6] Tetracycline resistance protein, tetM/tetO subfamily (xxxX)
Atu1949   - [1.1][11.7] translation elongation factor G (fusA)
Atu0315   - [1.1][11.7] peptide chain release factor 3 (prfC)

Family 456

Atu3491    - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu2812   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3814   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 452

Atu0830    - [1.1][13.7] choline dehydrogenase (betA)
Atu6063   - [4.1][5.99] oxidoreductase, GMC family (xxxX)
Atu4128   - [2.1][5.99] GMC type oxidoreductase (xxxX)

Family 4319

Atu2316   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3751   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu0761   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 428

Atu0977    - [1.1][11.2] serine protease DO-like protease (dop)
Atu1915   - [1.1][11.2] serine protease (htrA)
Atu2043   - [1.1][11.2] serine protease DO-like precursor (htrA)

Family 4025

Atu4095   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu1634   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu1435   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 4000

Atu4064   - [2.1][11.5] 30S ribosomal protein S21 (rpsU)
Atu3637   - [2.1][11.5] 30S ribosomal protein S21 (rpsU)
Atu3123   - [2.1][11.5] 30S ribosomal protein S21 (rpsU)

Family 3926

Atu1364    - [1.1][11.2] ATP-dependent Clp protease, ATP-binding subunit (clpA)
Atu4344   - [2.1][11.2] ATP-dependent Clp protease, ATP-binding subunit (clpB)
Atu4177   - [2.1][11.2] ATP-dependent Clp protease, ATP-binding subunit (clpB)

Family 386

Atu5001    - [3.1][15.4] replication protein B (repB)
Atu6044    - [4.1][15.4] replication protein (repB)
Atu3923   - [2.1][9.2] replication protein B (repB)

Family 379

Atu5543    - [3.1][12.4] transcriptional regulator, AraC family (xxxX)
Atu5338   - [3.1][12.4] transcriptional regulator. AraC family (xxxX)
Atu3153   - [2.1][12.4] transcriptional regulator, AraC family (xxxX)

Family 3748

Atu6127    - [4.1][15.4] conjugal transfer protein, Dtr system (traA)
Atu5111   - [3.1][15.4] conjugal transfer protein (traA)
Atu4855   - [2.1][15.4] conjugation protein (traA)

Family 3745

Atu5117   - [3.1][16.3] hypothetical protein (xxxX)
Atu4860   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu4856   - [2.1][15.4] nucleotidyltransferase (xxxX)

Family 3711

Atu5152   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu4895   - [2.1][16.3] hypothetical protein (xxxX)
Atu5305   - [3.1][16.3] hypothetical protein (xxxX)

Family 3664

Atu4222   - [2.1][1.6] sarcosine oxidase alpha subunit (soxA)
Atu4312   - [2.1][1.6] sarcosine oxidase alpha subunit (soxA)
Atu4069   - [2.1][1.6] sarcosine oxidase alpha subunit (soxA)

Family 3663

Atu4223   - [2.1][1.6] sarcosine oxidase delta subunit (soxD)
Atu4311   - [2.1][1.6] sarcosine oxidase alpha subunit (soxA)
Atu4068   - [2.1][1.6] sarcosine oxidase delta subunit (soxD)

Family 33

Atu6038     - [4.1][15.4] conjugal transfer protein (trbE)
Atu6170   - [4.1][17.4] component of type IV secretion system (virB4)
Atu5165   - [3.1][15.4] agrobacterium virulence homologue virB4 (avhB4)

Family 329

Atu1289    - [1.1][8.1] ABC transporter, membrane spanning protein (xxxX)
Atu1817   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu5178   - [3.1][8.7] ABC transporter, nucleotide binding/ATPase protein (xxxX)

Family 3266

Atu4631   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu5050   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu5049   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 3151

Atu2358   - [1.1][5.99] acetyltransferase (xxxX)
Atu3009   - [2.1][13.4] exopolysaccharide production protein (exoZ)
Atu3127   - [2.1][14.6] acetyltransferase (RspF)

Family 3134

Atu0680   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2335   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0229   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 31

Atu4684     - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu3953   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu0398   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 3011

Atu2464   - [1.1][2.3] formyltetrahydrofolate deformylase (purU)
Atu4231   - [2.1][2.3] formyltetrahydrofolate deformylase (purU)
Atu4315   - [2.1][2.3] formyltetrahydrofolate deformylase (purU)

Family 2869

Atu2045   - [1.1][11.2] HFLK protein (hflK)
Atu2044   - [1.1][11.2] HFLC protein (hflC)
Atu3772   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 2816

Atu6040    - [4.1][15.4] conjugal transfer protein (trbC)
Atu6168   - [4.1][17.4] component of type IV secretion system, pilin subunit (virB2)
Atu5163   - [3.1][15.4] agrobacterium virulence homologue virB2 (avhB2)

Family 280

Atu3922    - [2.1][9.2] replication protein C (repC)
Atu5002    - [3.1][15.4] replication protein C (repC)
Atu6045    - [4.1][15.4] replication intiator protein (repC)

Family 2796

Atu5330   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu2469   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu4727   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 2661

Atu0374   - [1.1][2.5] inosine-uridine preferring nucleoside hydrolase (iunH)
Atu1590   - [1.1][2.5] inosine-uridine preferring nucleoside hydrolase (iunH)
Atu4425   - [2.1][2.5] inosine-uridine preferring nucleoside hydrolase (iunH)

Family 266

Atu0118    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu5332   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu2471   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 2514

Atu1714   - [1.1][9.2] exonuclease III (xxxX)
Atu2761   - [1.1][9.2] exodeoxyribonuclease III (xxxX)
Atu5048   - [3.1][9.2] exodeoxyribonuclease III (xxxX)

Family 2448

Atu3578   - [2.1][7.99] glycerol-3-phosphate dehydrogenase (glpD)
Atu3876   - [2.1][7.1] glycerol-3-phosphate dehydrogenase (glpD)
Atu3897   - [2.1][7.1] glycerol-3-phosphate dehydrogenase (glpD)

Family 244

Atu0164    - [1.1][7.14] malate dehydrogenase (mdh)
Atu3208   - [2.1][7.14] malate dehydrogenase (xxxX)
Atu4676   - [2.1][7.14] malate dehydrogenase (mdh)

Family 2427

Atu3550   - [2.1][13.4] succinoglycan biosynthesis transport protein (exoT)
Atu4057   - [2.1][13.4] succinoglycan biosynthesis transport protein (exoT)
Atu4807   - [2.1][13.4] exopolysaccharide export protein (pssL)

Family 2327

Atu3998   - [2.1][4.1] 8-amino-7-oxononanoate synthase (bioF)
Atu5118   - [3.1][5.99] aminotransferase, class II (xxxX)
Atu2613   - [1.1][4.4] 5-aminolevulinate synthase (hemA)

Family 2311

Atu1045   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3979   - [2.1][5.99] dioxygenase (xxxX)
Atu2453   - [1.1][5.99] aromatic compounds dioxygenase (xxxX)

Family 2305

Atu3973   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu5329   - [3.1][4.6] demethylmenaquinone methyltransferase (menG)
Atu4285   - [2.1][4.6] S-adenosylmethionine:2-demethylmenaquinone methyltransferase (menG)

Family 2275

Atu1131   - [1.1][13.2] outer membrane protein (ropB)
Atu2159   - [1.1][13.2] outer membrane protein (omp)
Atu2534   - [1.1][13.2] outer membrane protein (xxxX)

Family 2203

Atu5494   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu5278   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu4136   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 2135

Atu0557   - [1.1][14.13] flagellum-specific ATP synthase (fliI)
Atu2622   - [1.1][7.4] ATP synthase beta chain (atpD)
Atu2624   - [1.1][7.4] ATP synthase alpha chain (atpA)

Family 210

Atu5245    - [3.1][5.99] amidase related to nicotinamidase (xxxX)
Atu2499   - [1.1][14.6] Isochorismatase (xxxX)
Atu0265   - [1.1][5.99] hydrolase (xxxX)

Family 2043

Atu1245   - [1.1][5.4] agmatinase (speB)
Atu4007   - [2.1][7.2] arginase (arcA)
Atu6018   - [4.1][7.2] arginase (arc)

Family 2031

Atu1258   - [1.1][11.2] ATP-dependent Clp protease, proteolytic subunit (clpP)
Atu2270   - [1.1][11.2] ATP-dependent Clp protease, proteolytic subunit (clpP)
Atu1627   - [1.1][11.2] ATP-dependent Clp protease, proteolytic subunit (clpP)

Family 1971

Atu0481    - [1.1][13.4] exopolysaccharide production protein (exoQ)
Atu3325   - [2.1][13.4] exopolysaccharide production protein (exoQ)
Atu2356   - [1.1][13.4] exoQ-like protein (exoQ)

Family 196

Atu2260    - [1.1][5.99] acetyltransferase (xxxX)
Atu1785   - [1.1][5.99] acetyltransferase (xxxX)
Atu3194   - [2.1][5.99] acetyltransferase (xxxX)

Family 1891

Atu4451   - [2.1][7.11] mannitol 2-dehydrogenase (mtlK)
Atu2813   - [1.1][7.13] altronate oxidoreductase (uxaB)
Atu3530   - [2.1][7.13] mannitol dehydrogenase (uxuB)

Family 1868

Atu0003   - [1.1][1.1] shikimate 5-dehydrogenase (aroE)
Atu4532   - [2.1][1.1] shikimate 5-dehydrogenase (aroE)
Atu4295   - [2.1][1.1] shikimate 5-dehydrogenase (aroE)

Family 1792

Atu0816   - [1.1][1.6] sulfate adenylate transferase, subunit 1 (cysN)
Atu1948   - [1.1][11.7] elongation factor TU (tuf)
Atu1966   - [1.1][11.7] elongation factor TU (tuf)

Family 179

Atu6022    - [4.1][1.99] hydantoin utilization protein (hyuA)
Atu3039   - [2.1][5.99] hydantoinase (xxxX)
Atu3043   - [2.1][1.99] hydantoinase A (hyuA)

Family 1727

Atu3386   - [2.1][12.2] two component sensor kinase (xxxX)
Atu5310   - [3.1][12.99] transmembrane sensor (xxxX)
Atu3693   - [2.1][12.2] two component sensor kinase (fecR)

Family 170

Atu6031    - [4.1][15.4] conjugal transfer protein (trbI)
Atu5171   - [3.1][15.4] agrobacterium virulence homologue virB10 (avhB10)
Atu6176   - [4.1][17.4] component of type IV secretion system (virB10)

Family 1639

Atu1833   - [1.1][11.5] ATP-dependent RNA helicase (rhlE)
Atu2333   - [1.1][10.3] dead-box ATP-dependent RNA helicase (rhlE)
Atu4171   - [2.1][14.1] cold-shock dead-box protein A (deaD)

Family 162

Atu0858    - [1.1][7.99] carboxymuconolactone decarboxylase (pcaC)
Atu5225    - [3.1][5.99] 4-carboxymuconolactone decarboxylase (xxxX)
Atu4541   - [2.1][7.99] gamma carboxymuconolactone decarboxylase (pcaC)

Family 1553

Atu0661   - [1.1][13.4] glycosyltransferase (xxxX)
Atu2591   - [1.1][5.99] glucosyltransferase (redB)
Atu4815   - [2.1][13.4] glycosyltransferase (bme6)

Family 1543

Atu0649   - [1.1][3.1] cyclopropane-fatty-acyl-phospholipid synthase (cfa)
Atu1979   - [1.1][13.99] cyclopropane-fatty-acyl-phospholipid synthase (xxxX)
Atu1974   - [1.1][3.1] cyclopropane-fatty-acyl-phospholipid synthase (cfa)

Family 1461

Atu5385   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu5350   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu5039   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 1347

Atu6090   - [4.1][9.2] ATP-dependent DNA ligase (xxxX)
Atu5097   - [3.1][9.2] ATP-dependent DNA ligase (xxxX)
Atu5051   - [3.1][9.2] ATP-dependent DNA ligase (xxxX)

Family 1346

Atu6091   - [4.1][16.2] conserved hypothetical protein (xxxX)
Atu3230   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu5098   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 1345

Atu6092   - [4.1][16.2] conserved hypothetical protein (xxxX)
Atu3229   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu5099   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 1327

Atu0902   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu1142   - [1.1][8.7] permease (xxxX)
Atu1739   - [1.1][8.7] permease (xxxX)

Family 1308

Atu0876   - [1.1][14.3] superoxide dismutase (sodF)
Atu4583   - [2.1][14.3] superoxide dismutase [Fe] (sodB)
Atu4726   - [2.1][14.3] superoxide dismutase (sodB)

Family 1302

Atu0868   - [1.1][16.2] Conserved hypothetical protein (xxxX)
Atu0878   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu5271   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 129

Atu1432    - [1.1][7.12] dihydrolipoamide acetyltransferase (aceF)
Atu3471   - [2.1][7.99] lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex E2 (bkdB)
Atu2635   - [1.1][7.14] dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex (sucB)

Family 128

Atu1430    - [1.1][7.12] pyruvate dehydrogenase beta subunit (pdhB)
Atu3472   - [2.1][7.99] 2-oxoisovalerate dehydrogenase beta subunit (bkdA2)
Atu1902   - [1.1][7.10] transketolase (tkt)

Family 126

Atu0929    - [1.1][5.99] amide hydrolase (xxxX)
Atu5258   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu5260   - [3.1][5.99] amide hydrolase (xxxX)

Family 1214

Atu1813   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0237   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3663   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 1191

Atu1516   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0014   - [1.1][7.2] 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (hpcE)
Atu4593   - [2.1][7.99] 2-hydroxyhepta-2,4-diene-1, 7-dioate isomerase/5-carboxymethyl-2-oxo-hex-3-ene-1, 7-dioate decarboxylase (hpaG)

Family 1138

Atu3601   - [2.1][1.2] diaminopimelate decarboxylase (lysA)
Atu3196   - [2.1][5.4] ornithine decarboxylase (speF)
Atu1673   - [1.1][1.2] diaminopimelate decarboxylase (lysA)

Family 1108

Atu0686   - [1.1][11.6] isoleucyl-tRNA synthetase (ileS)
Atu1719   - [1.1][11.1] valyl-tRNA synthetase (valS)
Atu2748   - [1.1][11.1] leucyl-tRNA synthetase (leuS)

Family 104

Atu6119    - [4.1][16.2] conserved hypothetical protein (tiorf76)
Atu6112    - [4.1][16.2] conserved hypothetical protein (xxxX)
Atu5104   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 1036

Atu3949   - [2.1][7.2] ornithine cyclodeaminase (arcB)
Atu6016   - [4.1][7.2] ornithine cyclodeaminase (ocd)
Atu4758   - [2.1][7.2] ornithine cyclodeaminase (arcB)

Family 1020

Atu2379   - [1.1][13.4] phosphomannomutase (noeK)
Atu4074   - [2.1][17.7] phosphoglucomutase (pgm/exoC)
Atu3709   - [2.1][7.13] phosphoglucomutase/phosphomannomutase (mrsA)

Family 102

Atu6121    - [4.1][16.2] conserved hypothetical protein (ych)
Atu5448   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu5107   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 991

Atu0066   - [1.1][4.99] pantothenate kinase (frcK)
Atu4749   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 976

Atu2235   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2234   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 968

Atu2243   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0395   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 951

Atu0046   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu4356   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 944

Atu0039   - [1.1][1.4] imidazoleglycerol-phosphate synthase cyclase (hisF)
Atu0040   - [1.1][1.4] phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase (hisA)

Family 926

Atu1179    - [1.1][3.1] 3-oxoacyl-(acyl-carrier-protein) synthase III (fabH)
Atu4001   - [2.1][3.1] 3-oxoacyl-(acyl-carrier-protein) synthase III (fabH)

Family 92

Atu0132    - [1.1][2.5] 2-deoxyribose-5-phosphate aldolase (deoC)
Atu4848   - [2.1][7.99] deoxyribose-phosphate aldolase (deoC)

Family 916

Atu0727    - [1.1][7.5] ferredoxin I (xxxX)
Atu1196    - [1.1][7.99] naphthalene 1,2-dioxygenase (xxxX)

Family 900

Atu4707    - [2.1][7.1] NADH dehydrogenase I chain F (nuoF)
Atu1275   - [1.1][7.5] NADH ubiquinone oxidoreductase chain F (nuoF)

Family 9

Atu6110     - [4.1][9.4] antirestriction protein (ardC)
Atu5103   - [3.1][15.4] antirestriction protein (ardC)

Family 897

Atu4704    - [2.1][1.99] hydantoin racemase (huy)
Atu3085   - [2.1][5.1] hydantoin Racemase (xxxX)

Family 876

Atu2201    - [1.1][5.99] hydrolase (xxxX)
Atu3614   - [2.1][7.15] glyoxalase II (gloB)

Family 86

Atu0138    - [1.1][7.1] surfeit 1 (surf)
Atu0773   - [1.1][7.5] surfeit 1 (surf1)

Family 848

Atu3177    - [2.1][9.3] ribonuclease H (rnhA)
Atu0776   - [1.1][9.3] ribonuclease H (xxxX)

Family 821

Atu0999    - [1.1][8.4] magnesium transport protein (mgtE)
Atu1547   - [1.1][8.4] magnesium transport protein (mgtE)

Family 820

Atu0998    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0294   - [1.1][14.6] bacitracin resistance protein (bacA)

Family 811

Atu0989    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3767   - [2.1][12.99] GGDEF family protein (xxxX)

Family 802

Atu2722    - [1.1][8.6] porin (ompA)
Atu3713   - [2.1][13.2] omp16 protein (palA)

Family 801

Atu2721    - [1.1][4.6] geranyltranstransferase (ispA)
Atu0634   - [1.1][4.6] octaprenyl-diphosphate synthase (ispB)

Family 78

Atu6136    - [4.1][16.2] conserved hypothetical protein (xxxX)
Atu2245   - [1.1][8.2] Na+/Pi-cotransporter (xxxX)

Family 769

Atu0102    - [1.1][13.4] exopolysaccharide production protein (pssA)
Atu3327   - [2.1][13.4] structural gene (exoY)

Family 749

Atu1332    - [1.1][1.1] 3-dehydroquinate dehydratase (aroQ)
Atu4531   - [2.1][1.1] 3-dehydroquinate dehydratase (aroQ)

Family 748

Atu1331    - [1.1][3.1] acetyl-CoA carboxylase, biotin carboxyl carrier protein (accB)
Atu4272   - [2.1][3.1] acetyl-CoA carboxylase biotin carboxyl carrier protein (accB)

Family 730

Atu1308    - [1.1][2.4] aspartate carbamoyl transferase (pyrB)
Atu0429   - [1.1][1.3] ornithine carbamoyltransferase (argF)

Family 729

Atu1307    - [1.1][2.4] dihydroorotase (pyrC)
Atu2386   - [1.1][2.4] dihydropyrimidinase (dht)

Family 714

Atu0450    - [1.1][10.4] transcription antitermination protein (nusG)
Atu1961   - [1.1][10.4] transcription antitermination protein NusG (nusG)

Family 69

Atu3529    - [2.1][7.13] mannonate dehydratase (uxuA)
Atu3257   - [2.1][7.13] mannonate dehydratase (uxuA)

Family 681

Atu1363    - [1.1][16.2] conserved hypothetical protein ()
Atu2232   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 672

Atu1372    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3265   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 67

Atu3527    - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu2815   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 663

Atu1381    - [1.1][13.2] group 1 outer membrane protein precursor (omp1)
Atu2615   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 661

Atu1383    - [1.1][3.1] (3R)-Hydroxymyristoyl-[acyl carrier protein]- Dehydratase (fabZ)
Atu1599   - [1.1][3.1] hydroxymyristoyl-acyl carrier protein dehydratase (fabZ)

Family 64

Atu2441    - [1.1][11.5] RNA methylase (xxxX)
Atu1993   - [1.1][11.6] tRNA/rRNA metyltransferase (xxxX)

Family 613

Atu5229    - [3.1][5.99] nitrilotriacetate monooxygenase component B (ntaB)
Atu4239   - [2.1][5.99] flavoprotein oxidoreductase (xxxX)

Family 608

Atu5223    - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu4237   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 599

Atu5212    - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu5066   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 595

Atu5418    - [3.1][5.99] opine/octopine dehydrogenase (xxxX)
Atu6017   - [4.1][7.99] NAD/NADP octopine/nopaline dehydrogenase (odh)

Family 589

Atu5424    - [3.1][5.99] oxidoreductase (xxxX)
Atu6077   - [4.1][5.99] monooxygenase (xxxX)

Family 582

Atu5432    - [3.1][16.3] hypothetical protein (xxxX)
Atu5158   - [3.1][16.3] hypothetical protein (xxxX)

Family 578

Atu5436    - [3.1][7.13] myo-inositol catabolism protein (iolH)
Atu4553   - [2.1][7.13] myo-inositol catabolism protein (iolH)

Family 567

Atu0489    - [1.1][5.99] methyltransferase (xxxX)
Atu1883   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 565

Atu0491    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0490    - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 56

Atu2121     - [1.1][13.5] glycosyl hydrolase/lysozyme (lyc)
Atu0233   - [1.1][13.5] lysozyme (xxxX)

Family 553

Atu0711    - [1.1][8.4] potassium uptake protein (xxxX)
Atu5466   - [3.1][8.4] potassium uptake protein (kup)

Family 536

Atu0730    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0728    - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 5233

Atu5045   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu6081   - [4.1][16.2] conserved hypothetical protein (xxxX)

Family 5220

Atu5493   - [3.1][16.3] hypothetical protein (xxxX)
Atu5288   - [3.1][16.3] hypothetical protein (xxxX)

Family 521

Atu6046    - [4.1][9.2] DNA invertase (y4CG)
Atu3849   - [2.1][15.4] resolvase (parA)

Family 5196

Atu5355   - [3.1][16.3] hypothetical protein (xxxX)
Atu5374   - [3.1][16.3] hypothetical protein (xxxX)

Family 5179

Atu4866   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu0859  - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 5178

Atu4859   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu5299   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 513

Atu0140    - [1.1][7.1] cytochrome o ubiquinol oxidase subunit III (cyoC)
Atu4391   - [2.1][7.3] nitric oxide reductase NorE protein (norE)

Family 5121

Atu4242   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu5224   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 512

Atu0141    - [1.1][7.1] cytochrome O ubiquinol oxidase subunit I (cyoB)
Atu0768   - [1.1][7.5] cytochrome-c oxidase chain I (coxA)

Family 5092

Atu4026   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu4714   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 504

Atu0153    - [1.1][12.99] transcriptional regulator, Fur family (irr)
Atu0354   - [1.1][12.1] ferric uptake regulator (fur)

Family 4989

Atu3032   - [2.1][16.3] hypothetical protein (xxxX)
Atu4897   - [2.1][16.3] hypothetical protein (xxxX)

Family 4988

Atu3031   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu4898   - [2.1][16.3] hypothetical protein (xxxX)

Family 498

Atu3510    - [2.1][5.99] amidohydrolase (xxxX)
Atu0242   - [1.1][5.99] carbon-nitrogen hydrolase (xxxX)

Family 497

Atu3511    - [2.1][7.5] glutaredoxin (grx)
Atu1854   - [1.1][5.99] glutaredoxin-related protein (grlA)

Family 4913

Atu0397   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0072   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 4895

Atu0477   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu5360  - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 486

Atu1342    - [1.1][11.7] peptide chain release factor 2 (prfB)
Atu4174   - [2.1][11.7] peptide chain release factor 1 (prfA)

Family 4686

Atu1980   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu1009   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 4672

Atu2058   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu1799   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 4660

Atu2157   - [1.1][12.1] tyrosine/serine protein phosphatase (xxxX)
Atu1228   - [1.1][16.3] hypothetical protein (xxxX)

Family 466

Atu3504    - [2.1][8.11] ABC transporter, substrate binding protein [sulfate] (xxxX)
Atu0820   - [1.1][8.11] ABC transporter, substrate binding protein [sulfate] (xxxX)

Family 4618

Atu1710   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2446   - [1.1][16.2] conserved hypothetical Protein (xxxX)

Family 4614

Atu1725   - [1.1][16.3] hypothetical protein (xxxX)
Atu2472   - [1.1][16.3] hypothetical protein (xxxX)

Family 4477

Atu4894   - [2.1][15.3] transposase (tnp)
Atu4862   - [2.1][15.3] IS21 family transposase (istA)

Family 4371

Atu3040   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu3042   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 4308

Atu3738   - [2.1][8.4] Na+/H+ antiporter (xxxX)
Atu3059   - [2.1][8.4] Na+/H+ antiporter (xxxX)

Family 4260

Atu3682   - [2.1][14.6] non-ribosomal peptide synthetase (mtaD)
Atu3683   - [2.1][14.6] peptide synthetase (xxxX)

Family 4253

Atu3672   - [2.1][14.6] polyketide synthase (xxxX)
Atu3681   - [2.1][14.6] polyketide synthetase (xxxX)

Family 4251

Atu3670   - [2.1][14.6] peptide synthetase (xxxX)
Atu3675   - [2.1][14.6] peptide synthetase (xxxX)

Family 4132

Atu2590   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2592   - [1.1][16.2] conserved hypothetical protein (redA)

Family 4111

Atu1360    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2565   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 4084

Atu4165   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu2004   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 4071

Atu4149   - [2.1][13.4] UDP-glucose 6-dehydrogenase (ugdH)
Atu2582   - [1.1][13.4] UDP-glucose/GDP-mannose dehydrogenase (xxxX)

Family 403

Atu2075    - [1.1][14.13] chemotaxis protein (cheW)
Atu2617   - [1.1][14.13] chemotaxis protein (cheW)

Family 4027

Atu4097   - [2.1][4.10] L-aspartate oxidase (nadB)
Atu2643   - [1.1][7.14] succinate dehydrogenase flavoprotein subunit (sdhA)

Family 4014

Atu4081   - [2.1][1.2] aspartate racemase (xxxX)
Atu3073   - [2.1][1.2] aspartate racemase (xxxX)

Family 399

Atu2069    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu1083   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 3956

Atu4313   - [2.1][1.6] sarcosine oxidase gamma subunit (soxG)
Atu4070   - [2.1][1.6] sarcosine oxidase gamma subunit (soxG)

Family 3929

Atu4341   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu4340   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 3922

Atu4348   - [2.1][18.99] VgrG protein (vgrG)
Atu3642   - [2.1][18.99] vgrG protein (vgrG)

Family 3920

Atu4351   - [2.1][16.3] hypothetical protein (xxxX)
Atu3639   - [2.1][16.3] hypothetical protein (xxxX)

Family 3884

Atu4392   - [2.1][12.99] denitrification regulatory protein (nnrU)
Atu2302   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 3874

Atu4404   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu4383   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 3839

Atu4442   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu4142   - [2.1][11.2] proteinase (pfpI)

Family 380

Atu5544    - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu4267   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 3716

Atu5147   - [3.1][17.6] Mg(2+) transport ATPase (attV)
Atu4137   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 363

Atu4510    - [2.1][16.2] conserved hypothetical protein (iolE)
Atu5434    - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 3601

Atu4287   - [2.1][11.2] NonF-related protein (xxx)
Atu4286   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 3593

Atu4296   - [2.1][5.99] dehydrogenase (xxxX)
Atu4377   - [2.1][7.99] oxidoreductase (xxxX)

Family 359

Atu1680    - [1.1][11.4] peptidyl prolyl cis-trans isomerase (ppiB)
Atu1679    - [1.1][11.4] peptidyl prolyl cis-trans isomerase (ppiB)

Family 3585

Atu3910   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu4277   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 352

Atu1691    - [1.1][12.99] GGDEF family protein (xxxX)
Atu1119   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 351

Atu1692    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu4480   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 350

Atu1693    - [1.1][8.4] glutathione-regulated potassium-efflux system protein (kefB)
Atu0692   - [1.1][7.5] glutathione-regulated potassium-efflux system protein (kefB)

Family 3444

Atu0224   - [1.1][13.2] components of type IV pilus, pilin subunit (ctpA)
Atu3514   - [2.1][13.2] fimbriae associated protein (pilA)

Family 3440

Atu0231   - [1.1][2.3] GMP synthase (guaA)
Atu2658   - [1.1][2.3] GMP synthase (guaA)

Family 344

Atu1080    - [1.1][13.3] alanine racemase (alr)
Atu3292   - [2.1][13.3] alanine racemase (alr)

Family 3439

Atu0232   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu5359   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 3431

Atu0241   - [1.1][11.7] GTP-binding elongation factor (lepA)
Atu2663   - [1.1][11.7] GTP-binding tyrosin phosphorylated protein (typA)

Family 3427

Atu0245   - [1.1][12.1] transcriptional regulator (xxxX)
Atu4226   - [2.1][12.1] transcriptional regulator (xxxX)

Family 342

Atu1082    - [1.1][8.1] branched-chain amino acid permease (xxxX)
Atu2068    - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 3381

Atu1675   - [1.1][12.1] transcriptional regulator (xxxX)
Atu1954   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 3346

Atu1623   - [1.1][5.99] pyridine nucleotide-disulphide oxidoreductase (xxxX)
Atu0238   - [1.1][5.99] oxidoreductase (xxxX)

Family 3289

Atu4607   - [2.1][13.4] sugar acetylase (nodX)
Atu1650   - [1.1][5.99] acyltransferase (xxxX)

Family 3278

Atu4618   - [2.1][13.4] dTDP-rhamnose-3,5-epimerase (rfbC)
Atu4799   - [2.1][13.4] dTDP-4-dehydrorhamnose 3,5-epimerase (rfbC)

Family 3265

Atu4632   - [2.1][9.2] ATP-dependent DNA ligase (xxxX)
Atu5055   - [3.1][9.2] ATP-dependent DNA ligase (xxxX)

Family 325

Atu1294    - [1.1][9.2] DNA-damage inducible protein P (dinP)
Atu5469   - [3.1][9.2] DNA-damage-inducible protein (dinP)

Family 3236

Atu4665   - [2.1][7.13] alpha-galactosidase (melA)
Atu4660   - [2.1][7.13] alpha-galactosidase (melA)

Family 322

Atu1297    - [1.1][12.2] two component response regulator (pleD)
Atu1060   - [1.1][12.2] two component response regulator (xxxX)

Family 3212

Atu2794   - [1.1][4.4] uroporphyrin-III C-methyltransferase (cobA)
Atu2796   - [1.1][4.4] precorrin-4 C11-methyltransferase (cobM)

Family 3183

Atu2762   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2578   - [1.1][12.1] cAMP-dependent protein kinase regulatory subunit (xxxX)

Family 318

Atu1302    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0772   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 3139

Atu2340   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3867   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 3118

Atu2318   - [1.1][7.7] L-lactate dehydrogenase (lldA)
Atu3871   - [2.1][7.7] L-lactate dehydrogenase (lldA)

Family 311

Atu2399    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0779   - [1.1][14.3] peroxiredoxin (xxxX)

Family 3108

Atu2306   - [1.1][11.2] methionin aminopeptidase (map)
Atu1606   - [1.1][11.4] methionine aminopeptidase (map)

Family 3098

Atu2293   - [1.1][16.3] hypothetical protein (xxxX)
Atu1233  - [1.1][16.3] hypothetical protein (xxxX)

Family 3097

Atu2292   - [1.1][2.5] adenine deaminase (adeC)
Atu4426   - [2.1][2.5] adenine deaminase (adeC)

Family 3077

Atu2265   - [1.1][8.3] benzoate transport protein (xxxX)
Atu3076   - [2.1][8.5] uracil transport protein (uraA)

Family 3058

Atu2519   - [1.1][11.2] dipeptidase (xxxX)
Atu4430   - [2.1][11.2] dipeptidase (xxxX)

Family 3028

Atu2486   - [1.1][3.1] cardiolipin synthase (cls)
Atu1630   - [1.1][3.99] phospholipase D family protein (xxxX)

Family 3022

Atu2477   - [1.1][15.1] DNA-binding protein (dps)
Atu4777   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 2975

Atu3235   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu4374   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 289

Atu3803    - [2.1][7.2] histidase (hutH)
Atu3933   - [2.1][7.2] histidine ammonia-lyase (hutH)

Family 2846

Atu6000   - [4.1][1.99] agrocinopine synthase (torf6)
Atu6008   - [4.1][1.99] agrocinopine synthase (acsx)

Family 2820

Atu6172   - [4.1][17.4] component of type IV secretion system (virB6)
Atu5167   - [3.1][15.4] agrobacterium virulence homologue VirB6 (avhB6)

Family 2817

Atu6169   - [4.1][17.4] component of type IV secretion system (virB3)
Atu5164   - [3.1][15.4] agrobacterium virulence homologue VirB3 (avhB3)

Family 2813

Atu6164   - [4.1][17.8] trans-zeatin secretion protein (tzs)
Atu6012   - [4.1][17.8] isopentenyl transferase (ipt)

Family 2801

Atu6147   - [4.1][16.2] conserved hypothetical protein (xxxX)
Atu2132   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 2798

Atu6144   - [4.1][5.99] agrocinopine phosphodiesterase (accF)
Atu4212   - [2.1][3.2] glycerophosphodiester phosphodiesterase (ugpQ)

Family 2782

Atu5313   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu2454   - [1.1][15.1] iron-chelator utilization protein (xxxX)

Family 2777

Atu5307   - [3.1][7.14] citrate synthase (cisZ)
Atu4851   - [2.1][7.14] citrate synthase (cisZ)

Family 2766

Atu5285   - [3.1][7.11] glycogen synthase (glgA)
Atu4075   - [2.1][7.11] glycogen synthase (glgA)

Family 2761

Atu5277   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu3812   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 27

Atu0475     - [1.1][16.3] hypothetical protein (xxxX)
Atu1983   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 2691

Atu2144   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3760   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 267

Atu0117    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu5331  - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 264

Atu0121    - [1.1][14.2] molecular chaperone, DnaJ family (dnaJ)
Atu0758   - [1.1][14.2] molecular chaperone, DnaJ family (dnaJ)

Family 263

Atu0122    - [1.1][14.2] DNAK Protein (dnaK)
Atu0988    - [1.1][14.2] molecular chaperone, Hsp70 family (xxxX)

Family 261

Atu0126    - [1.1][13.1] membrane lipoprotein (xxxX)
Atu1789   - [1.1][13.1] lipoprotein (xxxX)

Family 26

Atu0476     - [1.1][8.6] aquaporin (aqpZ)
Atu5361   - [3.1][8.6] aquaporin (aqpZ)

Family 2584

Atu4540   - [2.1][7.99] protocatechuate 3,4-dioxygenase beta chain (pcaH)
Atu4539   - [2.1][7.99] protocatechuate 3,4-dioxygenase alpha chain (pcaG)

Family 257

Atu2057    - [1.1][9.2] DNA helicase II (pcrA)
Atu4619   - [2.1][9.2] ATP-dependent DNA helicase (uvrD)

Family 2545

Atu4582   - [2.1][7.5] ferredoxin (xxxX)
Atu2751   - [1.1][5.99] ferredoxin (fdxA)

Family 2508

Atu1721   - [1.1][11.4] protein-L-isoaspartate O-methyltransferase (pcm)
Atu1701   - [1.1][11.4] L-isoaspartyl protein carboxyl methyltransferase (pcm)

Family 2505

Atu1728   - [1.1][5.99] flavodoxin (xxxX)
Atu4201   - [2.1][7.5] flavodoxin (wrbA)

Family 249

Atu0170    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2329   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 2487

Atu1751   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0691   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 2486

Atu1752   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu4303   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 2472

Atu1769   - [1.1][12.1] nitrogen regulatory protein PII (glnB)
Atu2757   - [1.1][12.1] nitrogen regulatory protein PII (glnK)

Family 2466

Atu1775   - [1.1][14.6] polyketide biosynthesis associated protein (xxxX)
Atu5011   - [3.1][14.6] polyketide synthase (frnE)

Family 2462

Atu3594   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu1753   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 2437

Atu3565   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu6193   - [4.1][16.2] conserved hypothetical protein (xxxX)

Family 2435

Atu3563   - [2.1][10.4] transcription elongation factor (greB)
Atu2182   - [1.1][10.4] transcription elongation facto (greA)

Family 2433

Atu3560   - [2.1][13.4] glycosyltransferase (xxxX)
Atu2183   - [1.1][13.4] lipopolysaccharide core biosynthesis mannosyltransferase (lpcC)

Family 243

Atu0163    - [1.1][8.4] tonB protein (tonB)
Atu3715   - [2.1][16.2] conserved hypothetical protein (tolA)

Family 2428

Atu3551   - [2.1][13.4] glycosyltransferase (xxxX)
Atu3558   - [2.1][13.4] glycosyltransferase (xxxX)

Family 242

Atu0162    - [1.1][8.4] biopolymer transport protein (exbD)
Atu3716   - [2.1][8.99] tolR protein (tolR)

Family 241

Atu0161    - [1.1][8.4] biopolymer transport protein (exbB)
Atu3717   - [2.1][8.99] tolQ Protein (tolQ)

Family 2398

Atu3272   - [2.1][13.4] exopolysaccharide export protein (pssN)
Atu4329   - [2.1][8.3] polysaccharide export protein (bexD)

Family 2380

Atu3290   - [2.1][4.12] phosphomethylpyrimidine kinase (thiD)
Atu2487   - [1.1][4.9] pyridoxamine kinase (pdxK)

Family 2360

Atu3311   - [2.1][7.13] phosphomannose isomerase (xxxX)
Atu2156   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 2352

Atu5334   - [3.1][7.2] hydroxypyruvate reductase (xxxX)
Atu3232   - [2.1][7.14] hydroxypyruvate reductase (xxxX)

Family 2340

Atu5348   - [3.1][5.99] lipase/esterase (xxxX)
Atu2481   - [1.1][3.2] lipase esterase (xxxX)

Family 2312

Atu3980   - [2.1][5.99] hydrolase (xxxX)
Atu3811   - [2.1][5.99] hydrolase (xxxX)

Family 2306

Atu3974   - [2.1][17.99] ice nucleation protein homolog (ina)
Atu3977   - [2.1][17.99] ice nucleation protein homolog (ina)

Family 2299

Atu1102   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2452   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 2297

Atu1104   - [1.1][4.9] pyridoxal phosphate biosynthesis protein (pdxA)
Atu5073   - [3.1][4.9] pyridoxal phosphate biosynthesis protein (pdxA)

Family 2292

Atu1110   - [1.1][11.2] cytosol aminopeptidase (pepA)
Atu0214   - [1.1][11.2] leucine aminopeptidase (xxxX)

Family 2269

Atu1137   - [1.1][9.2] NTP pyrophosphohydrolase, MutT family (xxxX)
Atu4270   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 2262

Atu1145   - [1.1][5.3] exopolyphosphatase (ppx)
Atu0619  - [1.1][5.3] exopolyphosphatase (ppx)

Family 226

Atu3792    - [2.1][8.1] L-asparagine permease (ansP)
Atu2143   - [1.1][8.1] ABC transporter, membrane spanning protein [amino acid] (xxxX)

Family 2243

Atu1165   - [1.1][1.6] serine hydroxymethyltransferase (glyA)
Atu4314   - [2.1][1.6] serine hydroxymethyltransferase (glyA)

Family 2233

Atu5530   - [3.1][12.2] two component response regulator (amiR)
Atu3907   - [2.1][12.2] two component response regulator (nasT)

Family 2219

Atu5510   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu5086   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 2209

Atu5500   - [3.1][5.99] dehydrogenase (xxxX)
Atu2310   - [1.1][2.5] xanthine dehydrogenase C-terminal subunit (xdhB)

Family 2202

Atu5492   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu5287   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 2198

Atu5484   - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu5488   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 2192

Atu5478   - [3.1][5.99] chloromuconate cycloisomerase (xxxX)
Atu1648   - [1.1][5.99] mandelate racemase/muconate lactonizing enzyme family protein (xxxX)

Family 2181

Atu0608   - [1.1][12.1] transcriptional regulator (xxxX)
Atu3587   - [2.1][12.1] transcriptional regulator (xxxX)

Family 2178

Atu0603   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu4043   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 2175

Atu0600   - [1.1][7.10] glucose-6-phosphate 1-dehydrogenase (zwf)
Atu4835   - [2.1][7.10] glucose 6-phosphate dehydrogenase (xxxX)

Family 2169

Atu0594   - [1.1][13.5] alpha-glucosidase (aglA)
Atu2295   - [1.1][7.11] alpha-glucosidase (aglA)

Family 216

Atu5238    - [3.1][16.2] conserved hypothetical protein (xxxX)
Atu4756   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 2130

Atu0552   - [1.1][14.13] flagellar basal-body rod protein (flgG)
Atu0558   - [1.1][14.13] flagellar basal body rod protein (flgF)

Family 212

Atu5242    - [3.1][11.2] aminopeptidase (xxxX)
Atu2510   - [1.1][5.99] aminopeptidase (xxxX)

Family 2117

Atu0310   - [1.1][4.3] glutathione synthetase (gshB)
Atu4147   - [2.1][4.3] glutathione synthetase (gshB)

Family 2108

Atu0320   - [1.1][4.6] ubiquinone/menaquinone biosynthesis methyltransferase (ubiE)
Atu0390   - [1.1][4.6] ubiquinone/menaquinone biosynthesis methyltransferase (ubiE)

Family 2103

Atu0325   - [1.1][4.4] oxygen-independent coproporphyrinogen III oxidase (hemN)
Atu1601   - [1.1][4.4] oxygen-independent coproporphyrinogen III oxidase (hemN)

Family 2074

Atu0356   - [1.1][11.6] miaB protein (miaB)
Atu2694   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 2071

Atu0359   - [1.1][14.6] hemolysin (xxxX)
Atu3732   - [2.1][14.6] hemolysin (tlyC)

Family 2069

Atu0361   - [1.1][12.1] transcriptional regulator (xxxX)
Atu3572   - [2.1][12.1] transcriptional regulator, HTH family (xxxX)

Family 2065

Atu1210   - [1.1][2.5] 2',3'-cyclic-nucleotide 2'-phosphodiesterase (cpdB)
Atu3770   - [2.1][2.5] 5'-nucleotidase (xxxX)

Family 205

Atu2436    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0247   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 2010

Atu3366   - [2.1][16.2] conserved hypothetical protein (xxx)
Atu5270   - [3.1][8.3] permease component of C4 dicarboxylate transporter (xxxX)

Family 2000

Atu3356   - [2.1][7.14] NADP-dependent malic enzyme (xxxX)
Atu1652   - [1.1][7.14] NADP-dependent malic enzyme (maeB)

Family 1998

Atu3354   - [2.1][1.1] pyrroloquinoline-quinone-dependent quinate dehydrogenase (xxxX)
Atu4135   - [2.1][7.13] glucose dehydrogenase (gcd)

Family 1992

Atu3348   - [2.1][16.2] conserved hypothetical protien (xxxX)
Atu4376   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 1972

Atu3326   - [2.1][13.4] exopolysaccharide production protein (xxxX)
Atu4793   - [2.1][13.4] exopolysaccharide production protein (bme11)

Family 1937

Atu1910   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2288   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 1883

Atu2822   - [1.1][7.13] D-galactarate dehydratase (garD)
Atu3817   - [2.1][7.99] dehydratase (xxxX)

Family 1880

Atu2825   - [1.1][11.5] Sun protein (sun)
Atu0289   - [1.1][11.5] Sun protein (sun)

Family 1872

Atu2834   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu5293   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 1860

Atu0012   - [1.1][9.2] DNA gyrase subunit B (gyrB)
Atu1622   - [1.1][9.2] DNA gyrase subunit B (gyrB)

Family 1840

Atu5445   - [3.1][5.99] oxidoreductase (xxxX)
Atu2188   - [1.1][5.99] oxidoreductase (xxxX)

Family 1834

Atu5453   - [3.1][8.7] ABC transporter, membrane spanning protein (attG)
Atu5133   - [3.1][17.6] conserved hypothetical protein (attG)

Family 1833

Atu5454   - [3.1][16.2] conserved hypothetical protein (attH)
Atu5134   - [3.1][17.6] conserved hypothetical protein (attH)

Family 1818

Atu1489   - [1.1][14.3] arsenical resistance protein (arsH)
Atu5322   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 1812

Atu1495   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu5019   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 181

Atu1067    - [1.1][13.3] penicillin-binding protein (pbpB)
Atu2100    - [1.1][13.3] penicillin binding protein 2 (xxxX)

Family 1806

Atu1501   - [1.1][16.3] hypothetical protein (xxxX)
Atu2163   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 1803

Atu1507   - [1.1][9.2] DNA gyrase subunit A (gyrA)
Atu1158   - [1.1][9.2] topoisomerase IV subunit A (parC)

Family 1787

Atu0804   - [1.1][8.1] proton/glutamate transport protein (xxxX)
Atu3298   - [2.1][8.3] C4-dicarboxylate transport protein (dctA)

Family 1780

Atu0796   - [1.1][17.6] AttS protein (attS)
Atu5144   - [3.1][11.2] dipeptidyl peptidase IV (attS)

Family 1767

Atu0778   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu3276   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 1745

Atu3405   - [2.1][14.3] haloalkanoic acid dehalogenase (hadL)
Atu3408   - [2.1][14.3] 2-haloalkanoic acid dehalogenase (hadL)

Family 1742

Atu3402   - [2.1][5.99] tartrate dehydrogenase (xxxX)
Atu2791   - [1.1][1.5] 3-isopropylmalate dehydrogenase (leuB)

Family 1740

Atu3400   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu1253   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 1734

Atu3393   - [2.1][7.5] pseudoazurin (xxxX)
Atu2283   - [1.1][7.5] pseudoazurin (xxxX)

Family 1731

Atu3390   - [2.1][8.11] ABC transporter, substrate binding protein [iron] (xxxX)
Atu3391   - [2.1][8.11] ABC transporter, substrate binding protein [iron] (xxxX)

Family 169

Atu4722    - [2.1][4.3] gamma-glutamyltranspeptidase (ggt)
Atu5507   - [3.1][4.3] gamma-glutamyltranspeptidase (ggt)

Family 1687

Atu0533   - [1.1][14.1] septum formation associated protein (maf)
Atu0002   - [1.1][14.1] maf protein (maf)

Family 1646

Atu1843   - [1.1][2.3] phosphoribosylaminoimidazole-succinocarboxamide synthase (purC)
Atu2548   - [1.1][2.3] phosphoribosylaminoimidazole-succinocarboxamide synthase (purC)

Family 1615

Atu4476   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu1967   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 1613

Atu4474   - [2.1][11.1] glutamyl-tRNA synthetase (gltX)
Atu3589   - [2.1][11.1] glutamyl-tRNA Synthetase (gltX)

Family 1612

Atu4473   - [2.1][11.1] lysyl-tRNA synthetase (lysS)
Atu2554   - [1.1][11.1] lysyl-tRNA synthetase (poxA)

Family 1591

Atu1013   - [1.1][14.3] ferredoxin reductase (xxxX)
Atu2023   - [1.1][7.5] NADH dehydrogenase (ndh)

Family 1575

Atu1038   - [1.1][12.2] two component response regulator (xxxX)
Atu1987   - [1.1][12.2] two component response regulator (exsF)

Family 1544

Atu0651   - [1.1][4.6] 4-hydroxybenzoate octaprenyltransferase (ubiA)
Atu0769   - [1.1][4.4] protoheme IX farnesyltransferase (ctaB)

Family 1518

Atu5169   - [3.1][15.4] agrobacterium virulence homologue virB8 (avhB8)
Atu6174   - [4.1][17.4] component of type IV secretion system (virB8)

Family 1517

Atu5170   - [3.1][15.4] agrobacterium virulence homologue virB9 (avhB9)
Atu6175   - [4.1][17.4] component of type IV secretion system (virB9)

Family 151

Atu2111    - [1.1][1.6] sarcosine oxidase (solA)
Atu2110    - [1.1][1.6] sarcosine oxidase (solA)

Family 15

Atu0913     - [1.1][8.4] Na+/H+ antiporter (mnhE)
Atu0509   - [1.1][8.4] phaE protein (phaE)

Family 1467

Atu5378   - [3.1][12.2] Two component response regulator (xxxX)
Atu4671   - [2.1][12.2] two component response regulator (xxxX)

Family 144

Atu0828    - [1.1][12.99] transcriptional regulator, TetR family (xxxX)
Atu2059    - [1.1][12.99] transcriptional regulator, TetR family (betI)

Family 1431

Atu1454   - [1.1][4.4] siroheme synthase (cysG)
Atu3899   - [2.1][4.4] siroheme synthase (cysG)

Family 1414

Atu1480   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu1830   - [1.1][14.3] bacterioferritin comigratory protein (bcp)

Family 1412

Atu1483   - [1.1][7.5] cytochrome b561 (xxxX)
Atu2631   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 1411

Atu1484   - [1.1][12.1] transcriptional regulator (prtR)
Atu2031   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 1409

Atu1486   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu2029   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 1405

Atu3421   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu3726   - [2.1][7.99] flavin dependant oxidoreductase (xxxX)

Family 1401

Atu3428   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu1842   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 1369

Atu6067   - [4.1][16.2] conserved hypothetical protein (xxxX)
Atu6065   - [4.1][16.2] conserved hypothetical protein (xxxX)

Family 1365

Atu6071   - [4.1][14.99] Zn-dependent hydrolases (attM)
Atu5139   - [3.1][17.6] Zn-dependent hydrolases (attM)

Family 136

Atu6126    - [4.1][15.4] conjugal transfer protein, Dtr system (traC)
Atu5110   - [3.1][15.4] conjugal transfer protein (traC)

Family 135

Atu6125    - [4.1][15.4] conjugal transfer protein, Dtr system (traD)
Atu5109   - [3.1][15.4] conjugal transfer protein (traD)

Family 1336

Atu0911   - [1.1][8.4] Na+/H+ antiporter (mnhC)
Atu0511   - [1.1][8.4] pH adaption potassium efflux system protein (phaC)

Family 1328

Atu0903   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu0802   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 1326

Atu0901   - [1.1][9.2] methylated-DNA--protein-cysteine methyltransferase (ada)
Atu4459   - [2.1][9.2] 6-O-methylguanine-DNA methyltransferase (ada)

Family 130

Atu1433    - [1.1][14.3] arylesterase (ada)
Atu3454   - [2.1][3.2] arylesterase (ada)

Family 1289

Atu1418   - [1.1][1.2] methylenetetrahydrofolate reductase (metF)
Atu1764   - [1.1][1.2] methylenetetrahydrofolate reductase (metF)

Family 1280

Atu1409   - [1.1][2.99] ureidoglycolate hydrolase (allA)
Atu2324   - [1.1][2.99] ureidoglycolate hydrolase (allA)

Family 1263

Atu1392   - [1.1][7.14] citrate synthase (cisY)
Atu5306   - [3.1][7.14] citrate synthase (cis)

Family 1238

Atu0746   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu5201   - [3.1][15.1] pirin-like protein (pirA)

Family 1222

Atu1822   - [1.1][8.4] transport system (sufD)
Atu1824   - [1.1][8.4] ABC transporter subunit (sufB)

Family 1221

Atu1821   - [1.1][5.6] aminotransferase (nifS)
Atu1825   - [1.1][1.5] cysteine desulfurase (nifS)

Family 1219

Atu1819   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu1713   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 1209

Atu1802   - [1.1][7.15] lactoylglutathione lyase (gloA)
Atu2456   - [1.1][5.99] lactoylglutathione lyase (lguL)

Family 1192

Atu1515   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu1444   - [1.1][12.1] nitrogen regulation protein (nifR)

Family 1184

Atu1523   - [1.1][11.2] beta-mannosidase precursor (manA)
Atu2575   - [1.1][7.99] mannosidase (xxxX)

Family 1173

Atu1537   - [1.1][5.6] cytochrome-c oxidase, FixN chain (fixN)
Atu4388   - [2.1][7.3] nitric oxide reductase, cytochrome b subunit (norB)

Family 1172

Atu1539   - [1.1][8.2] sulfate permease (hvsT)
Atu1156   - [1.1][8.2] sulfate permease (xxxX)

Family 1170

Atu1541   - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu4298   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 1163

Atu1550   - [1.1][11.4] polypeptide deformylase (def)
Atu0366   - [1.1][11.4] polypeptide deformylase (def)

Family 1159

Atu3629   - [2.1][9.2] site-specific recombinase (xerD)
Atu2628   - [1.1][9.2] site-specific recombinase (xerC)

Family 1155

Atu3623   - [2.1][14.2] molecular chaperone, DnaJ family (dnaJ)
Atu5514   - [3.1][14.2] molecular chaperone, DnaJ family (dnaJ)

Family 114

Atu1783    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu4460   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 1130

Atu3932   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu3884   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 113

Atu1782    - [1.1][16.2] conserved hypothetical protein (xxxX)
Atu4461   - [2.1][16.2] conserved hypothetical protein (xxxX)

Family 1126

Atu3928   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu2595   - [1.1][16.2] conserved hypothetical protein (xxxX)

Family 1123

Atu3925   - [2.1][16.2] conserved hypothetical protein (xxxX)
Atu5518   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 1102

Atu0693   - [1.1][14.6] PmbA/TldD related protein (xxxX)
Atu0765   - [1.1][7.99] TldD (tldD)

Family 1093

Atu0703   - [1.1][7.6] KHG-KDPG bifunctional aldolase (kdgA)
Atu4494   - [2.1][7.6] KHG-KDPG bifunctional aldolase (kdgA)

Family 1092

Atu0704   - [1.1][7.13] 2-dehydro-3-deoxygalactonate kinase (dgoK)
Atu5456   - [3.1][16.2] conserved hypothetical protein (xxxX)

Family 1074

Atu3473   - [2.1][7.99] 2-oxoisovalerate dehydrogenase alpha subunit (bkdA1)
Atu1429   - [1.1][7.12] pyruvate dehydrogenase alpha subunit (pdhA)

Family 1069

Atu3478   - [2.1][7.2] 3-methylcrotonoyl-CoA carboxylase beta subunit (mccB)
Atu3586   - [2.1][7.2] propionyl-CoA carboxylase (xxxX)

Family 1024

Atu2385   - [1.1][11.2] N-carbamoyl-beta-alanine amidohydrolase (amaB)
Atu3070   - [2.1][11.2] N-carbamoyl-beta-alanine amidohydrolase (amaB)

Family 1017

Atu2373   - [1.1][13.4] UDP-hexose transferase (exoM)
Atu4052   - [2.1][13.4] succinoglycan biosynthesis protein (exoM)

Family 1001

Atu0080   - [1.1][8.7] permease (xxxX)
Atu1795   - [1.1][8.3] malonate transporter (xxxX)

Family 10

Atu6109     - [4.1][16.2] conserved hypothetical protein (xxxX)
Atu5102   - [3.1][16.2] conserved hypothetical protein (xxxX)