Publications

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Goobes, G., Goobes R., Shaw W. J., Gibson J. M., Long J. R., Raghunathan V., et al. (2008).  The structure, dynamics, and energetics of protein adsorption-lessons learned from adsorption of statherin to hydroxyapatite. Magnetic resonance in chemistry. 45(S1), S32-S47. Abstract  Download: goobes08A.pdf (523.71 KB)
Goobes, G., Goobes R., Schueler-Furman O., Baker D., Stayton P. S., & Drobny G. P. (2006).  Folding of the C-terminal bacterial binding domain in statherin upon adsorption onto hydroxyapatite crystals. Proceedings of the National Academy of Sciences of the United States of America. 103(44), 16083-8. Abstract  Download: goobes06A.pdf (725.15 KB)
Graña, O., Baker D., MacCallum R. M., Meiler J., Punta M., Rost B., et al. (2005).  CASP6 assessment of contact prediction. Proteins. 61 Suppl 7, 214-24. Abstract  Download: grana05A.pdf (857.44 KB)
Grantcharova, V. P., Riddle D. S., Santiago J. V., & Baker D. (1998).  Important role of hydrogen bonds in the structurally polarized transition state for folding of the src SH3 domain. Nature structural biology. 5(8), 714-20. Abstract  Download: grantcharova98A.pdf (833.81 KB)
Grantcharova, V. P., & Baker D. (2001).  Circularization changes the folding transition state of the src SH3 domain. Journal of molecular biology. 306(3), 555-63. Abstract  Download: grantcharova01A.pdf (341.23 KB)
Grantcharova, V. P., & Baker D. (1997).  Folding dynamics of the src SH3 domain. Biochemistry. 36(50), 15685-92. Abstract  Download: grantcharova97A.pdf (171.64 KB)
Grantcharova, V. P., Riddle D. S., & Baker D. (2000).  Long-range order in the src SH3 folding transition state. Proceedings of the National Academy of Sciences of the United States of America. 97(13), 7084-9. Abstract  Download: grantcharova00A.pdf (313 KB)
Grantcharova, V., Alm E. J., Baker D., & Horwich A. L. (2001).  Mechanisms of protein folding.. Current opinion in structural biology. 11(1), 70-82. Abstract
Gray, J. J., Moughon S., Wang C., Schueler-Furman O., Kuhlman B., Rohl C. A., et al. (2003).  Protein-protein docking with simultaneous optimization of rigid-body displacement and side-chain conformations. Journal of molecular biology. 331(1), 281-99. Abstract  Download: gray03A.pdf (2.12 MB)
Gray, J. J., Moughon S. E., Kortemme T., Schueler-Furman O., Misura K. M. S., Morozov A. V., et al. (2003).  Protein-protein docking predictions for the CAPRI experiment. Proteins. 52(1), 118-22. Abstract  Download: gray03B.pdf (467.92 KB)
Gu, H., Doshi N., Kim D. E., Simons K. T., Santiago J. V., Nauli S., et al. (1999).  Robustness of protein folding kinetics to surface hydrophobic substitutions. Protein science. 8(12), 2734-41. Abstract  Download: gu99A.pdf (368.14 KB)
Gu, H., Yi Q., Bray S. T., Riddle D. S., Shiau A. K., & Baker D. (1995).  A phage display system for studying the sequence determinants of protein folding. Protein science. 4(6), 1108-17. Abstract  Download: gu95A.pdf (4.61 MB)
Gu, H., Kim D. E., & Baker D. (1997).  Contrasting roles for symmetrically disposed beta-turns in the folding of a small protein. Journal of molecular biology. 274(4), 588-96. Abstract  Download: gu97A.pdf (654.1 KB)
Guenaga, J., Dosenovic P., Ofek G., Baker D., Schief W. R., Kwong P. D., et al. (2011).  Heterologous epitope-scaffold prime:boosting immuno-focuses B cell responses to the HIV-1 gp41 2F5 neutralization determinant. PloS one. 6(1), e16074. Abstract  Download: guenaga11A.pdf (1.95 MB)