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Han, K. F., Bystroff C., & Baker D. (1997). Three-dimensional structures and contexts associated with recurrent amino acid sequence patterns. Protein science. 6(7), 1587-90. Abstract Download: han97A.pdf (2.35 MB)

Plaxco, K. W., Simons K. T., Ruczinski I., & Baker D. (2000). Topology, stability, sequence, and length: defining the determinants of two-state protein folding kinetics. Biochemistry. 39(37), 11177-83. Abstract Download: plaxco00b.pdf (70.47 KB)

Bradley, P., Misura K. M. S., & Baker D. (2005). Toward high-resolution de novo structure prediction for small proteins. Science. 309(5742), 1868-71. Abstract Download: bradley05B.pdf (421.25 KB)

Barth, P., Schonbrun J., & Baker D. (2007). Toward high-resolution prediction and design of transmembrane helical protein structures. Proceedings of the National Academy of Sciences of the United States of America. 104(40), 15682-7. Abstract Download: barth07A.pdf (728.74 KB)

Warning: Table './bakerDrupal/watchdog' is marked as crashed and should be repaired query: INSERT INTO watchdog (uid, type, message, variables, severity, link, location, referer, hostname, timestamp) VALUES (0, 'php', '%message in %file on line %line.', 'a:4:{s:6:\"%error\";s:7:\"warning\";s:8:\"%message\";s:397:\"date() [<a href=\'function.date\'>function.date</a>]: It is not safe to rely on the system\'s timezone settings. You are *required* to use the date.timezone setting or the date_default_timezone_set() function. In case you used any of those methods and you are still getting this warning, you most likely misspelled the timezone identifier. We selected \'America/Los_Angeles\' for \'PDT/-7.0/DST\' instead\";s:5:\"%file\";s:77:\"/nfs/bronfs/uwfs/hw00/d66/bakerpg/drupal/sites/all/modules/boost/boost.module\";s:5:\"%line\";i:2219;}', 3, '' in /nfs/bronfs/uwfs/hw00/d66/bakerpg/drupal/includes/database.mysqli.inc on line 128

Warning: Table './bakerDrupal/watchdog' is marked as crashed and should be repaired query: INSERT INTO watchdog (uid, type, message, variables, severity, link, location, referer, hostname, timestamp) VALUES (0, 'php', '%message in %file on line %line.', 'a:4:{s:6:\"%error\";s:7:\"warning\";s:8:\"%message\";s:397:\"date() [<a href=\'function.date\'>function.date</a>]: It is not safe to rely on the system\'s timezone settings. You are *required* to use the date.timezone setting or the date_default_timezone_set() function. In case you used any of those methods and you are still getting this warning, you most likely misspelled the timezone identifier. We selected \'America/Los_Angeles\' for \'PDT/-7.0/DST\' instead\";s:5:\"%file\";s:77:\"/nfs/bronfs/uwfs/hw00/d66/bakerpg/drupal/sites/all/modules/boost/boost.module\";s:5:\"%line\";i:2228;}', 3, '' in /nfs/bronfs/uwfs/hw00/d66/bakerpg/drupal/includes/database.mysqli.inc on line 128