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Primary Publication

This publication represents a primary interest of the Baker lab

Important role of hydrogen bonds in the structurally polarized transition state for folding of the src SH3 domain

Grantcharova, V. P., Riddle D. S., Santiago J. V., & Baker D. (1998). Important role of hydrogen bonds in the structurally polarized transition state for folding of the src SH3 domain. Nature structural biology. 5(8), 714-20.

Primary Publication

NMR characterization of residual structure in the denatured state of protein L

Yi, Q., Scalley-Kim M. L., Alm E. J., & Baker D. (2000). NMR characterization of residual structure in the denatured state of protein L. Journal of molecular biology. 299(5), 1341-51.

Primary Publication

Detection of protein coding sequences using a mixture model for local protein amino acid sequence

Thayer, E. C., Bystroff C., & Baker D. (2000). Detection of protein coding sequences using a mixture model for local protein amino acid sequence. Journal of computational biology : a journal of computational molecular cell biology. 7(1-2), 317-27.

Primary Publication

Evolutionary conservation in protein folding kinetics

Plaxco, K. W., Larson S., Ruczinski I., Riddle D. S., Thayer E. C., Buchwitz B., et al. (2000). Evolutionary conservation in protein folding kinetics. Journal of molecular biology. 298(2), 303-12.

Primary Publication

Critical role of beta-hairpin formation in protein G folding

McCallister, E. L., Alm E., & Baker D. (2000). Critical role of beta-hairpin formation in protein G folding. Nature structural biology. 7(8), 669-73.

Primary Publication

Native protein sequences are close to optimal for their structures

Kuhlman, B., & Baker D. (2000). Native protein sequences are close to optimal for their structures. Proceedings of the National Academy of Sciences of the United States of America. 97(19), 10383-8.

Primary Publication

A breakdown of symmetry in the folding transition state of protein L

Kim, D. E., Fisher C., & Baker D. (2000). A breakdown of symmetry in the folding transition state of protein L. Journal of molecular biology. 298(5), 971-84.

Primary Publication

Long-range order in the src SH3 folding transition state

Grantcharova, V. P., Riddle D. S., & Baker D. (2000). Long-range order in the src SH3 folding transition state. Proceedings of the National Academy of Sciences of the United States of America. 97(13), 7084-9.

Primary Publication

HMMSTR: a hidden Markov model for local sequence-structure correlations in proteins

Bystroff, C., Thorsson V., & Baker D. (2000). HMMSTR: a hidden Markov model for local sequence-structure correlations in proteins. Journal of molecular biology. 301(1), 173-90.

Primary Publication

A surprising simplicity to protein folding

Baker, D. (2000). A surprising simplicity to protein folding. Nature. 405(6782), 39-42.

Primary Publication

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