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Collaborative Publication

This publication represents a collaboration with the Baker lab

Interactions of the Transmembrane Polymeric Rings of the Salmonella enterica Serovar Typhimurium Type III Secretion System

Sanowar, S., Singh P., Pfuetzner R. A., André I., Zheng H., Spreter T., et al. (2010). Interactions of the Transmembrane Polymeric Rings of the Salmonella enterica Serovar Typhimurium Type III Secretion System. mBio. 1(3),

Collaborative Publication

Consistent blind protein structure generation from NMR chemical shift data

Shen, Y., Lange O., Delaglio F., Rossi P., Aramini J. M., Liu G., et al. (2008). Consistent blind protein structure generation from NMR chemical shift data. Proceedings of the National Academy of Sciences of the United States of America. 105(12), 4685-90.

Collaborative Publication

A double S shape provides the structural basis for the extraordinary binding specificity of Dscam isoforms

Sawaya, M. R., Wojtowicz W. M., Andre I., Qian B., Wu W., Baker D., et al. (2008). A double S shape provides the structural basis for the extraordinary binding specificity of Dscam isoforms. Cell. 134(6), 1007-18.

Collaborative Publication

Computational design of epitope-scaffolds allows induction of antibodies specific for a poorly immunogenic HIV vaccine epitope

Correia, B. E., Ban Y. - E. A., Holmes M. A., Xu H., Ellingson K., Kraft Z., et al. (2010). Computational design of epitope-scaffolds allows induction of antibodies specific for a poorly immunogenic HIV vaccine epitope. Structure. 18(9), 1116-26.

Collaborative Publication

Structural inference of native and partially folded RNA by high-throughput contact mapping

Das, R., Kudaravalli M., Jonikas M., Laederach A., Fong R., Schwans J. P., et al. (2008). Structural inference of native and partially folded RNA by high-throughput contact mapping. Proceedings of the National Academy of Sciences of the United States of America. 105(11), 4144-9.

Collaborative Publication

The structure, dynamics, and energetics of protein adsorption-lessons learned from adsorption of statherin to hydroxyapatite

Goobes, G., Goobes R., Shaw W. J., Gibson J. M., Long J. R., Raghunathan V., et al. (2008). The structure, dynamics, and energetics of protein adsorption-lessons learned from adsorption of statherin to hydroxyapatite. Magnetic resonance in chemistry. 45(S1), S32-S47.

Collaborative Publication

Experimental and computational analyses of the energetic basis for dual recognition of immunity proteins by colicin endonucleases

Keeble, A. H., Joachimiak L. A., Maté M. J., Meenan N., Kirkpatrick N., Baker D., et al. (2008). Experimental and computational analyses of the energetic basis for dual recognition of immunity proteins by colicin endonucleases. Journal of molecular biology. 379(4), 745-59.

Collaborative Publication

Ranking predicted protein structures with support vector regression

Qiu, J., Sheffler W., Baker D., & Noble W. S. (2008). Ranking predicted protein structures with support vector regression. Proteins. 71(3), 1175-82.

Collaborative Publication

A new twist in TCR diversity revealed by a forbidden alphabeta TCR

McBeth, C., Seamons A., Pizarro J. C., Fleishman S. J., Baker D., Kortemme T., et al. (2008). A new twist in TCR diversity revealed by a forbidden alphabeta TCR. Journal of molecular biology. 375(5), 1306-19.

Collaborative Publication

Residues participating in the protein folding nucleus do not exhibit preferential evolutionary conservation

Larson, S. M., Ruczinski I., Davidson A. R., Baker D., & Plaxco K. W. (2002). Residues participating in the protein folding nucleus do not exhibit preferential evolutionary conservation. Journal of molecular biology. 316(2), 225-33.

Collaborative Publication

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