cortical_thickness
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cortical_thickness [2017/08/04 18:57] mpenrod |
cortical_thickness [2017/08/04 18:58] (current) mpenrod [Longitudinal Analysis] |
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| As described above, analysis of ROIs provides a lot of useful information, such as change in those regions over time or correlations with behavioral measures. The freesurfer command ''mri_surfcluster'' takes an mgh file, among other inputs, and outputs several files containing useful information. The command can either be run in the command line or in MATLAB using the function ''do_mri_surfcluster.m''. Further documentation on ''mri_surfclsuter'' can be found [[https://surfer.nmr.mgh.harvard.edu/fswiki/mri_surfcluster|here]]. | As described above, analysis of ROIs provides a lot of useful information, such as change in those regions over time or correlations with behavioral measures. The freesurfer command ''mri_surfcluster'' takes an mgh file, among other inputs, and outputs several files containing useful information. The command can either be run in the command line or in MATLAB using the function ''do_mri_surfcluster.m''. Further documentation on ''mri_surfclsuter'' can be found [[https://surfer.nmr.mgh.harvard.edu/fswiki/mri_surfcluster|here]]. | ||
| - | In order to use functions such as ''lme_long_fitandplot.m'', the outputs of these files must be processed and reformatted into matrices. Regarding the analyses described above, ''corrplot_ROIs.m'' will reformat information for correlational analysis and ''cluster_2_lme_longmtx'' should be used to process the clusters extracted from the output of ''lme_whole_brain_analysis.m''. | + | In order to use functions such as ''lme_long_fitandplot.m'', the outputs of these files must be processed and reformatted into matrices. Regarding the analyses described above, ''corrplot_ROIs.m'' will reformat information for correlational analysis and ''cluster_2_lme_longmtx.m'' should be used to process the clusters extracted from the output of ''lme_whole_brain_analysis.m''. |
cortical_thickness.1501873077.txt.gz ยท Last modified: 2017/08/04 18:57 by mpenrod
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