2016

• Dighe, Manjiri and Kim, Yun Jung and Seshamani, Sharmishtaa and Blazejewska, Ania I and Mckown, Susan and Caucutt, Jason and Gatenby, Christopher and Studholme, Colin, Regional placental blood oxygen level dependent (BOLD) changes with gestational age in normally developing pregnancies using long duration R2* mapping in utero, Proceedings of SPIE Medical Imaging, Image processing 2016

2015

• S. Seshamani, A. Blazejewska, C. Gatenby , S. Mckown, J. Caucutt, M. Dighe, C. Studholme, Robust R2 Map Estimation From Motion Scattered Slices for Fetal fMRI, Proceedings IEEE International Symposium on Biomedical Imaging: From nano to Macro, April 2015
• S. Seshamani, A. I. Blazejewska, Ch. Gatenby, S. Mckown, J. Caucutt, M. Dighe, C. Studholme, "Comparing Consistency of R2* and T2*-weighted BOLD Analysis of Resting State Fetal fMRI", SPIE Medical Imaging, 2015

2014

• M. Liu, S. Seshamani, L. Harrylock, A. Kitsch, S. Miller, V. Chau, K. Poskitt, F. Rousseau, C. Studholme "Spatially adapted augmentation of age-specific atlas-based segmentation using patch-based priors", SPIE Medical Imaging, 2014

2013

• X. Cheng, J. Wilm, S. Seshamani, M. Fogtmann, C. Kroenke and C. Studholme. "Adapting Parcellation Schemes to Study Fetal Brain Connectivity in Serial Imaging Studies, IEEE EMBS, 2013
• S. Seshamani, M. Fogtmann, X.Cheng, M. Thomason, C. Gatenby, C. Studholme "Cascaded Slice to Volume Registration for Moving Fetal fMRI.", in Proc. IEEE International Symposium on Biomedical Imaging: From Nano to Macro, April 2013.

2012

• M. Fogtmann, T. Chapman, K. Kim, S. Seshamani, C. Studholme. "A unified approach for motion-estimation and super-resolution reconstruction from structural Magnetic Resonance Imaging on moving subjects", MICCAI Workshop on Perinatal and Paediatric Imaging: PaPI 2012.

2011

• V. Rajagopalan, J. A. Scott, P. A. Habas, K. Kim, F. Rousseau, O. A. Glenn, A. J. Barkovich, C. Studholme, "Spatiotemporal morphometry of adjacent tissue layers with application to the study of sulcal formation," in Medical Image Computing and Computer Assisted Intervention, September 2011.
• B.  Caldairou, N. Passat, P. A. Habas, C. Studholme, M.  Koob, J.-L. Dietemann, and F. Rousseau, "Cortex segmentation in reconstructed fetal MRI by using structural constraints," in Proc. International Conference on Computer Analysis of Images and Patterns, August 2011.
• F. Rousseau, P. A. Habas, and C. Studholme, "Human brain labeling using image similarities," in Proc. IEEE Computer Vision and Pattern Recognition, June 2011.
• B. Caldairou, N. Passat, P. A. Habas, C. Studholme, M. Koob, J.-L. Dietemann, and F. Rousseau, "Segmentation of the cortex in fetal MRI using a topological model," in Proc. IEEE International Symposium on Biomedical Imaging: From Nano to Macro, March-April 2011.
• P. A. Habas, V. Rajagopalan, J. A. Scott, K. Kim, A. Roosta, F. Rousseau, A. J. Barkovich, O. A. Glenn, and C. Studholme, "Detection and mapping of delays in early cortical folding derived from in utero MRI," in Medical Imaging 2011: Image Processing, Proc. SPIE, vol. 7962, 7692O0, February 2011.
• K. Kim, P. A. Habas, V. Rajagopalan, J. A. Scott, F. Rousseau, A. J. Barkovich, O. A. Glenn, and C. Studholme, "SLIMMER: SLice MRI Motion Estimation and Reconstruction tool for studies of fetal anatomy," in Medical Imaging 2011: Image Processing, Proc. SPIE, vol. 7962, 79624D, February 2011.

2010

• V. Rajagopalan, J. A. Scott, P. A. Habas, K. Kim, F. Rousseau, O. A. Glenn, A. J. Barkovich, and C. Studholme, "Measures for characterizing directionality specific volume changes in TBM of brain growth," in Medical Image Computing and Computer Assisted Intervention, LNCS, vol. 6362, pp. 339-346, September 2010.
• F. Rousseau, K. Kim, C. Studholme, M. Koob, and J.-L. Dietemann, "On super-resolution for fetal brain MRI," in Medical Image Computing and Computer Assisted Intervention, LNCS, vol. 6362, pp. 355-362, September 2010.
• E. Oubel, M. Koob, C. Studholme, J.-L. Dietemann, and F. Rousseau, "Reconstruction of scattered data in fetal diffusion MRI," in Medical Image Computing and Computer Assisted Intervention, LNCS, vol. 6361, pp. 574-581, September 2010.
• K. Kim, P. A. Habas, V. Rajagopalan, J. A. Scott, J. M. Corbett-Detig, F. Rousseau, O. A. Glenn, A. J. Barkovich, and C. Studholme, "Non-iterative relative bias correction for 3D reconstruction of in utero fetal brain MR imaging," in Proc. 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, September 2010.
• F. Rousseau, K. Kim, and C. Studholme, "A groupwise super-resolution approach: application to brain MRI," in Proc. IEEE International Symposium on Biomedical Imaging: From Nano to Macro, pp. 860-863, April 2010.
• K. Kim, P. A. Habas, F. Rousseau, O. A. Glenn, A. J. Barkovich, M. Koob, J.-L. Dietemann, A. J. Robinson, K. J. Poskitt, S. P. Miller, and C. Studholme, "Reconstruction of a geometrically correct diffusion tensor image of a moving human fetal brain," in Medical Imaging 2010: Image Processing, Proc. SPIE, vol. 7623, 76231I, February 2010.

2009

• P. A. Habas, K. Kim, F. Rousseau, O. A. Glenn, A. J. Barkovich, and C. Studholme, "A spatio-temporal atlas of the human fetal brain with application to tissue segmentation," in Medical Image Computing and Computer-Assisted Intervention, LNCS, vol. 5761, part I, pp. 289-296, September 2009.
• B. Caldairou, F. Rousseau, N. Passat, P. A. Habas, C. Studholme, and C. Heinrich, "A non-local fuzzy segmentation method: application to brain MRI," in Proc. International Conference on Computer Analysis of Images and Patterns, LNCS, vol. 5702, pp. 606-613, September 2009.
• P. A. Habas, K. Kim, D. Chandramohan, F. Rousseau, O. A. Glenn, and C. Studholme, "Statistical model of laminar structure for atlas-based segmentation of the fetal brain from in-utero MR images," in Medical Imaging 2009: Image Processing, Proc. SPIE, vol. 7259, 725917, February 2009.

2008

• P. A. Habas, K. Kim, F. Rousseau, O. A. Glenn, A. J. Barkovich, and C. Studholme, "Atlas-based segmentation of the germinal matrix from in utero clinical MRI of the fetal brain," in Medical Image Computing and Computer-Assisted Intervention, LNCS, vol. 5241, part I, pp. 351-358, September 2008.
• K. Kim, M. F. Hansen, P. A. Habas, F. Rousseau, O. A. Glenn, A. J. Barkovich, and C. Studholme, "Intersection-based registration of slice stacks to form 3D images of the human fetal brain," in Proc. IEEE International Symposium on Biomedical Imaging: From Nano to Macro, pp. 1167-1170, May 2008.
• K. Sjostrand, V. A. Cardenas, R. Larsen, and C. Studholme, "A generalization of voxel-wise procedures for high-dimensional statistical inference using ridge regression," in Medical Imaging 2008: Image Processing, Proc. SPIE, vol. 6914, 69140A, February 2008.
• J. Blumenfeld, C. Studholme, J. Carballido-Gamio, T. M. Link, and S. Majumdar, "Three-dimensional image registration of MR proximal femur images for the analysis of trabecular bone parameters," in Medical Imaging 2008: Image Processing, Proc. SPIE, vol. 6914, 69140G, February 2008.

2007

• C. Studholme and V. A. Cardenas, "Population based analysis of directional information in serial deformation tensor morphometry," in Medical Image Computing and Computer-Assisted Intervention, LNCS, vol. 4792, pp. 311-318, November 2007.
• C. Studholme, "Incorporating DTI data as a constraint in deformation tensor morphometry between T1 MR images," in Information Processing in Medical Imaging, LNCS, vol. 4584, pp. 223-232, July 2007.
• C. E. Rodriguez-Carranza, P. Mukherjee, D. Vigneron, A. J. Barkovich, and C. Studholme, "Comparing 3D gyrification index and area-independent curvature-based measures in quantifying neonatal brain folding," in Medical Imaging 2007: Image Processing, Proc. SPIE, vol. 6512, 65120N, February 2007.
• S. Hadjidemetriou, C. Studholme, S. Mueller, M. W. Weiner, and N. Schuff, "Restoration of MRI data for field nonuniformities using high order neighborhood statistics," in Medical Imaging 2007: Image Processing, Proc. SPIE, vol. 6512, 65121L, February 2007.

2006

• C. E. Rodriguez-Carranza, P. Mukherjee, D. Vigneron, J. A. Barkovich, and C. Studholme, "A system for measuring regional surface folding of the neonatal brain from MRI," in Medical Image Computing and Computer-Assisted Intervention, LNCS, vol. 4191, pp. 201-208, October 2006.
• C. E. Rodriguez-Carranza, F. Rousseau, B. Iordanova, O. A. Glenn, D. Vigneron, P. Mukerjee, A. J. Barkovich, and C. Studholme, "An ISO-surface folding analysis method applied to premature neonatal brain development," in Medical Imaging 2006: Image Processing, Proc. SPIE, vol. 6144, 61441K, February 2006.

2005

• F. Rousseau, O. A. Glenn, B. Iordanova, C. E. Rodriguez-Carranza, D. Vigneron, A. J. Barkovich, and C. Studholme, "A novel approach to high resolution fetal brain MR imaging," in Medical Image Computing and Computer-Assisted Intervention, LNCS, vol. 3749, pp. 548-555, October 2005.
• C. Studholme, C. S. Drapaca, and V. A. Cardenas, "Intensity robust viscous fluid deformation based morphometry using regionally adapted mutual information," in Proc. 27th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, pp. 470-473, September 2005.
• F. Rousseau, A. A. Maudsley, A. Ebel, A. Darkazanli, P. Weber, K. Sivasankaran, Y. Yu, and C. Studholme, "Evaluation of sub-voxel registration accuracy between MRI and 3D MR spectroscopy of the brain," in Medical Imaging 2005: Image Processing, Proc. SPIE, vol. 5747, pp. 1213-1221, February 2005.

2004

• V. A. Cardenas and C. Studholme, "Co-analysis of maps of atrophy rate and atrophy state in neurodegeneration," in Medical Image Computing and Computer-Assisted Intervention, LNCS, vol. 3217, pp. 680-687, September 2004.
• C. Studholme, C. S. Drapaca, V. A. Cardenas, and M. W. Weiner, "Challenges and progress toward quantitative deformation morphometry of gyral anatomy," in Proc. 2nd IEEE International Symposium on Biomedical Imaging: Nano to Macro, vol. 1, pp. 599-602, April 2004.
• C. S. Drapaca, V. A. Cardenas, and C. Studholme, "Robust space-time extraction of ventricular surface evolution using multiphase level sets," in Medical Imaging 2004: Image Processing, Proc. SPIE, vol. 5370, pp. 538-548, February 2004.

2003

• C. Studholme, "Simultaneous population based image alignment for template free spatial normalisation of brain anatomy," in Proc. 2nd International Workshop on Biomedical Image Registration, LNCS, vol. 2717, pp. 81-90, June 2003.
• E. Song, V. A. Cardenas, D. Sacrey, R. Blumenfeld, M. W. Weiner, and C. Studholme, "MRI tissue segmentation incorporating a bias field modulated smoothness prior," in Medical Imaging 2003: Image Processing, Proc. SPIE, vol. 5032, pp. 437-444, February 2003.

2002

• C. Studholme, V. A. Cardenas, A. A. Maudsley, and M. W. Weiner, "An intensity consistent approach to the cross sectional analysis of deformation tensor derived maps of brain shape," in Medical Image Computing and Computer-Assisted Intervention, LNCS, vol. 2488, pp. 492-499, September 2002.

2001

• C. Studholme, V. A. Cardenas, N. Schuff, H. Rosen, B. Miller, and M. W. Weiner, "Detecting spatially consistent structural differences in Alzheimer's and fronto temporal dementia using deformation morphometry," in Medical Image Computing and Computer-Assisted Intervention, LNCS, vol. 2208, pp. 41-48, October 2001.
• C. Studholme, V. A. Cardenas, and M. W. Weiner, "Multiscale image and multiscale deformation of brain anatomy for building average brain atlases," in Medical Imaging 2001: Image Processing, Proc. SPIE, vol. 4322, pp. 557-568, February 2001.