Publications & Presentations

Field: Materials Science
 Article Title: Molecular biomimetics: nanotechnology through biology
 Authors: Sarikaya, M;Tamerler, C;Jen, AKY;Schulten, K;Baneyx, F

Publications

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  1. N. Suzuki, L. Gamble, C. Tamerler, M. Sarikaya, D. G. Castner and F. S. Ohuchi, Adsorption of genetically engineered proteins studied by time-of-flight secondary ion mass spectrometry (TOF-SIMS). Part A: data acquisition and principal component analysis (PCA), Surface and Interface Analysis, 39, 419-426, (2007).
  2. N. Suzuki, M. Sarikaya and F. S. Ohuchi, Adsorption of genetically engineered proteins studied by time-of-flight secondary ion mass spectrometry (TOF-SIMS). Part B: hierarchical cluster anlysis, Surface and Interface Analysis, 39, 427-433, (2007).
  3. C. Tamerler and M. Sarikaya, Molecular biomimetics: Utilizing Nature's molecular ways in practical engineering, Acta Biomaterialia, 3, 289-299, (2007).
  4. C. Tamerler, T. Kacar, D. Sahin, H. Fong and M. Sarikaya, "Genetically engineered polypeptides for inorganics: A utility in biological materials science and engineering", Materials Science and Engineering C, 27, 558-564, (2007).
  5. D. B. Allred, M. T. Zin, H. Ma, M. Sarikaya, F. Baneyx, A. K. Jen and D. T. Schwartz, Direct nanofabrication and transmission electron microscopy on a suite of easy-to-prepare ultrathin film substrates, Thin Solid Films, 515, 5341-5347, (2007).
  6. A. Presenda, D. B. Allred, F. Baneyx, D. T. Schwartz and M. Sarikaya, Stability of S-layer proteins for electrochemical nanofabrication, Colloids and Surfaces B: Biointerfaces, in press, (2007)
  7. M. T. Zin, H. Ma, A. M. Munro, D. S. Ginger, M. Gungormus, K. Leong, C. Tamerler, M. Sarikaya and A. K. Jen, Well-controlled arrays of core-shell quantum dots with tunable photoluminescence properties, Poly. Mater. Sci. Eng., 95, 1002, (2006).
  8. M. T. Zin, A. M. Munro, M. Gungormus, N. Y. Wong, H. Ma, C. Tamerler, D. S. Ginger, M. Sarikaya and A. K. Y, Jen Peptide-mediated surface-immobilized quantum dot hybrid nanoassemblies with controlled photoluminescense, Journal of Materials Chemistry, 17, 866-872 (2006).
  9. C. Tamerler, M. Duman, E. E. Oren, M. Gungormus, X, Xiong, T. Kacar, B. A. Parviz and M. Sarikaya, Materials Specificity and Directed Assembly of a Gold-Binding Peptide, Small, 2, 1372-1378 (2006).
  10. C. Tamerler, E. E. Oren, M. Duman, E. Venkatasubramanian and M. Sarikaya, Adsorption Kinetics of an Engineered Gold Binding Peptide by Surface Plasmon Resonance Spectroscopy and a Quartz Crystal Microbalance, Langmuir, 22, 7712-7718 (2006).
  11. C. Tamerler and M. Sarikaya, Molecular Biomimetics: Linking peptides with inorganic structures in "Microbial Bionanotechnology: Biological Self-assembly Systems and Biopolymer-based Nanostructures", Ed: Bernd Rehm, Chapter 8, pp: 191-221 (Horizon, London, 2006).
  12. E. E. Oren, C. Tamerler, M. Sarikaya, Metal Recognition of Septapeptides via Polypod Molecular Architecture, Nano Letters, 5 (3), 415-419 (2005).
  13. H.Dai, W.-S. Choe, C. K. Thai, M.Sarikaya, B. A. Traxler, F. Baneyx, D. T. Schwartz, Nonequilibrium Synthesis and Assembly of Hybrid Inorganic-Protein Nanostructures Using an Engineered DNA Binding Protein, J. Am. Chem. Soc., 127 (44), 15637-15643 (2005).
  14. M. T. Zin, H. Ma, M Sarikaya, A. K. Y. Jen, Assembly of Gold Nanoparticles using Genetically Engineered Poypeptides, Small, 1 (7), 698-702 (2005).
  15. C. Tamerler and M. Sarikaya, Molecular Biomimetics: Building Materials Nature's Way, One Molecule at a Time in "Nanofabrication Towards Biomedical Applications: Techniques, Tools, Applications, and Impact", Eds: C.S.S.R. Kumar, J. Hormes, C. Leuschner, (2005).
  16. S. Sills, H. Fong, C. Buenviaje, M. Sarikaya, R. M. Overney, Thermal Transition Measurements of Polymer Thin Films by Modulated Nanointentation, J. Appl. Phys., 98, 014302 (2005).
  17. K. Katti, D. R. Katti, J. Tang, S. Pradhan, M. Sarikaya, Modeling Mechanical Responses in a Laminated Biocomposite, J. of Materials Science, 40, 1749-1755 (2005).
  18. D. B. Allred, M. Sarikaya, F. Baneyx, D. T. Schwartz, Electrochemical Nanofabrication Using Crystalline Protein Masks, Nano Letters, 5 (4), 609-613 (2005).
  19. N. Kantarci, C. Tamerler, M. Sarikaya, T. Haliloglu, P. Doruker, Molecular Dynamics Simulations on Constrained Metal Binding Peptides, Polymer, 46, 4307-4313 (2005).
  20. X. Kong and S. A. Jenekhe, Block Copolymers Containing Conjugated Polymer and Polypeptide Sequences: Synthesis and Self-Assembly of Electroactive and Photoactive Nanostructures, Macromolecules, 37, 8180-8183 (2004).
  21. M. Sarikaya, C. Tamerler, D.T. Schwartz and F. Baneyx, Materials Assembly and Formation using Engineered Polypeptides, Annu. Rev. Mater. Res., 34, 373-408 (2004).
  22. J. L. Kulp, M. Sarikaya, J.S. Evans, Molecular Characterization of a prokaryotic polypeptide sequence that catalyzes Au crystal formation, J. Mater. Chem., 14 (14), 2325-2332 (2004).
  23. C. K. Thai, H. Dai, M. S. R. Sastry, M. Sarikaya, D. T. Schwartz and F. Baneyx, Identification and Characterization of Cu2O- and ZnO-Binding Polypeptides by Escherichia coli Cell Surface Display: Toward an Understanding of Metal Oxide Binding, Biotechnology and Bioengineering, 87 (2), 129-137 (2004).
  24. S.H. Kang, H. Ma, M.-S. Kang, K.-S. Kim, A. K.-Y. Jen, M.H. Zareie, and M. Sarikaya, Ordered Self-Assembly and Electronic Behavior of C60–Anthrylphenylacetylene Hybrid, Angew. Chem. Int. Ed., 43, 1512-1516 (2004).
  25. E. DiMasi and M. Sarikaya, Synchrotron x-ray microbeam diffraction from abalone shell, J. Mater. Res., 19 (5), 1471-1476 (2004).
  26. H. Dai, C.K. Thai, M. Sarikaya, F. Baneyx, and D. T. Schwartz, Through-Mask Anodic Patterning of Copper Surfaces and Film Stability in Biological Media, Langmuir, 20, 3483-3486 (2004).
  27. J. L. Wacker, M. H. Zareie, H. Fong, M. Sarikaya, and P. Muchowski, Hsp70 aqnd Hsp40 attenuate formation of spherical and annular polyglutamine oligomers by partitioning monomer, Nature Structural & Molecular Biology, 11 (12) 1215-1222 (2004).
  28. M. Sarikaya, C. Tamerler, A.K.Y. Jen, K. Shulten and F. Baneyx, Molecular biomimetics: nanotechnology through biology, Nature Materials, 2 (9), 577-585 (2003).
  29. M. H. Zareie, H. Ma, B.W. Reed, A.K.Y. Jen and M. Sarikaya, Controlled assembly of conducting monomers for molecular electronics, Nano Letters, 3 (2), 139-142 (2003).
  30. H. Fong, S. N. White, M. L. Paine, W. Luo, M. L. Snead and M. Sarikaya, Enamel structure properties controlled by engineered proteins in transgenic mice, J. Bone and Mineral Research, 18 (11), 2052-2059 (2003).
  31. Tamerler, S. Dincer, D. Heidel, M. H. Zareie and M. Sarikaya, Biomimetic multifunctional molecular coatings using engineered proteins, Progress in Organic Coatings, 47 (3-4) 267-274 (2003).
  32. B. W. Reed, M. Sarikaya, Background subtraction for low-loss transmission electron energy-loss spectroscopy, Ultramicroscopy (to be published 2002).
  33. R. Braun, M. Sarikaya, K. Schulten Genetically engineered gold-binding polypeptides: structure prediction and molecular dynamics, J. Biomater. Sci. Polymer Edn., 13, 747–757 (2002).
  34. B. W. Reed, M. Sarikaya, Electronic properties of carbon nanotubes by transmission electron energy-loss spectroscopy, Phys. Rev. B, 64, 195404 (2001).
  35. B. W. Reed, M. Sarikaya, L.R. Dalton, & G.F. Bertsch, Transmission electron energy-loss spectroscopy study of nanotubes upon high temperature treatment, Applied Physics Letters, 78, 3358 (2001).
  36. M. Sarikaya H. Fong, N. Sunderland, B. D. Flinn and G. Mayer, Biomimetic model of a sponge-spicular optical fiber-mechanical properties and structure, J. Mater. Res., 16(5) 1420-1428 (2001).
  37. S. N. White, W. Luo, M. L. Paine, H. Fong, M. Sarikaya, and M. L. Snead, Biological organization of hydroxyapatite crystallites into a fibrous continuum toughens and controls anisotropy in human enamel, J. Dent. Res., 80 (1):321-326 (2001).
  38. S. Brown, M. Sarikaya, and E. Johnson, Genetic analysis of crystal growth, J. Mol. Biol., 299, 725-732 (2000).
  39. J. Holbery, V. Eden, R. Fisher, & M. Sarikaya, Experimental determination of SPM cantilever spring constants utilizing a nanoindentation apparatus, Rev. Sci. Instrums., 71, 3769-3776 (2000).
  40. T. Graham & M. Sarikaya, Growth Dynamics of red abalone shell: a biomimetic model, Materials Sci. & Eng.-C, 11, 145-153 (2000).
  41. H. Fong, M. Sarikaya, S. White, and M. L., Snead, Nanomechanical properties profiles across dentin-enamel junction of human incisor teeth, Mater. Sci. & Eng.-C, 7 (2) 119-128 (2000).
  42. S. White, M. L. Paine, W. Luo, M. Sarikaya, H. Fong, Z. K. Yu, Z. C. Li, and M. L. Snead, The dentino-enamel junction is a broad transitional zone uniting dissimilar bioceramic composites, J. Am. Cream. Soc., 83 (1) 238-240 (2000).

Invited Presentations

  1. M. Sarikaya, "Biomimetics: Materials Processing via Biology," Keynote Presentation, International Conference on Biomimetics (Y. Takai), University of Nagoya, Nagoya, Japan, Jan. 12-13, 2001.
  2. M. Sarikaya, "Biomimetics: Nanomaterials via Biology," in a Topical Conference on: Polymers for Nanotechnology, 24th Annual Asilomar Conference on Polymers (Eric Baer), Pacific Grove, California, Feb. 5-7, 2001.
  3. M. Sarikaya, "Enamel Regeneration via Biomimetics," Plenary Talk, American Association of Dental Research (AADR), Spring Meeting,Chicago, March 4-7, 2001.
  4. M. Sarikaya, "Biomimetics," Faculty of Science, Bilkent University - Ankara, Turkey, March 25, 2000.
  5. M. Sarikaya, "Biomimetics: Materials Design and Synthesis via Biology, at Henkel Company - Dusseldorf, Germany, March 20, 2000.
  6. M. Sarikaya, "Biomimetics: Materials Science and Engineering through Biology," Departmental Seminar, Materials Science and Engineering, Oxford University, Oxford, UK, March 17, 2000.
  7. M. Sarikaya et al., "Biomimetics: Lessons from Biology Towards Functional Engineering Materials," Keynote Presentation, Symposium on: Biologically-Inspired Materials Design, Society of Experimental Mechanics, Orlando, Florida, June 4-6, 2000.
  8. M. Sarikaya, Biomimetics," at: Symposium on Bioceramics, Pacific Coast Regional Meeting of the American Ceramic Society, San Francisco, California, Aug. 18-20, 2000.
  9. M. Sarikaya, "Electronic Properties of Carbon Nanotubes by Transmission EELS," in FEMMS2000, 8th Conference on Frontiers of Electron Microscopy in Materials Science, Bridge to 21st Century Electron Microscopy (Host: Sumio Iijima), Matsui, Japan, Nov. 13-17, 2000.
  10. M. Sarikaya, "Soft-Solution Processing via Biomimetics," in: Soft Materials Processing of Materials for the Next Millennium (Host: Y. Yoshimura), Tokyo Institute of Technology, Yokohama, Japan, Dec. 9-13, 2000.
  11. March 14, 2000, M. Sarikaya, "Biomimetics: "Materials Fabrication through Biology for Practical Applications," Henkel Industries.Inc., Dusseldorf, Germany (A chemical technologies company - producing deodorants, creams, and
  12. March 8, 2000, M. Sarikaya, "Materials Assembly Through Biology," Materials Science and Engineering Dept., Oxford University, Oxford, UK.
  13. March 1-2, 2000, M. L. Snead & M. Sarikaya (both gave talks), "Enamel Biomimetics," TEMBIS Meeting, NIH, Bethesda, Maryland.
  14. M. Sarikaya, R. Humbert, and S. Brown, "Materials nanoassembly via Engineered Polypeptides," American Chemical Society, Spring Meeting, March 22-25, 1999, Anaheim, CA.
  15. M. Sarikaya, R. Humbert, and S. Brown, Nanomaterials assembly via proteins selected by ombinatorial mutagenesis, Centennial Meeting of American Physical Society, March 21-24, 1999, Atlanta, Georgia.
  16. May 10, 1999: M. Sarikaya, "Materials Science through Biology," Theoretical Biophysics, Beckman Institute, University of Illinois, Urbana-Champaign, IL.
  17. M. Sarikaya, "Biomimetic Proteins for Functional Materials Assembly," Bio-Insprired Design for Biological and Industrial Materials, Knowledge Foundation, Aug. 19-20, 1999, San Francisco, CA.
  18. M. Sarikaya, "Microcopy in Biomimetics," Materials Research Society, Boston, MA, Nov. 27-Dec. 3, 1999.
  19. Mehmet Sarikaya, Daniel Heidel, Hanson Fong, Richard Humbert, Malcolm L. Snead, and Stanley Brown, "Genetically-Engineered Biomimetic Proteins For Functional Materials Assembly," Materials Research Society, Boston, MA, Nov. 27-Dec. 3, 1999.