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UW Biochemistry Research on the Cover of Nature

Cover of Nature, June 16, 2005

A study by Professor Hannele Ruohola-Baker, with Biochemistry graduate student Steve Hatfield as first author, was among three papers highlighted in the June 16, 2005 issue of Nature. This image from Hatfield et al. shows that stem cells lacking microRNAs stop dividing due to overproduction of the tumor suppressor p21/p27. The work was performed in collaboration with Professor Richard Carthew of Northwestern University. The regulatory functions of microRNAs in the process of stem cell division are one focus of the Ruohola-Baker group, which uses the fruit fly Drosophila as a model for human disease.

Reference

Hatfield SD, Shcherbata HR, Fischer KA, Nakahara K, Carthew RW, Ruohola-Baker H (2005) Stem cell division is regulated by the microRNA pathway. Nature 435: 974-978.

Abstract

One of the key characteristics of stem cells is their capacity to divide for long periods of time in an environment where most of the cells are quiescent. Therefore, a critical question in stem cell biology is how stem cells escape cell division stop signals. Here, we report the necessity of the microRNA (miRNA) pathway for proper control of germline stem cell (GSC) division in Drosophila melanogaster. Analysis of GSCs mutant for dicer-1 (dcr-1), the double-stranded Rnase III essential for miRNA biogenesis, revealed a marked reduction in the rate of germline cyst production. These dcr-1 mutant GSCs exhibit normal identity but are defective in cell cycle control. On the basis of cell cycle markers and genetic interactions, we conclude that dcr-1 mutant GSCs are delayed in the G1 to S transition, which is dependent on the cyclin-dependent kinase inhibitor Dacapo, suggesting that miRNAs are required for stem cells to bypass the normal G1/S checkpoint. Hence, the miRNA pathway might be part of a mechanism that makes stem cells insensitive to environmental signals that normally stop the cell cycle at the G1/S transition. For more information visit the Ruohola-Baker Group Project page.

Other Breaking News

Beer Tom Schmidlin is disguised by day as a mild-mannered graduate student working with Assistant Professor of Biochemistry, Brian Kennedy, on the yeast Saccharomyces cerevisiae as a model for human aging, but Schmidlin also has a secret life: He was chosen as “Beerdrinker of the Year”.
graph Using a mouse model, Thomas Hnasko of the Graduate Program in Neurobiology and Behavior and Professor Richard Palmiter have investigated the role of dopamine in the behavioural responses to drugs of abuse. As first author, Hnasko was interviewed by Nature.
Ponce de Leon Regulatory pathway linking nutrition and aging characterized by graduate student Kristan Steffan, Assistant Professor of Biochemistry Brian Kennedy, and Matt Kaeberlein, a postdoctoral fellow with Stan Fields, Professor of Genome Sciences.
Gonen
Specific lipid-protein interactions can be visualized in the structure of two-dimensional Aquaporin-0 crystals as determined by cryoelectron microscopy ("cryo em") at the remarkable resolution of 1.9 Angstroms. Tamir Gonen, now an Assistant Professor of Biochemistry, recently completed this work as a postdoctoral fellow with Professors Thomas Walz and Stephen Harrison at Harvard Medical School.
Early Detection Screens

Early detection screens for six metabolic disorders in newborns developed byMichael Gelb, Professor of Chemistry and Adjunct Professor of Biochemistry
L2L The L2L suite combines a simple analytical tool and comprehensive database for discovering the hidden significance in microarray expression data (the tool and database are available online at http://depts.washington.edu/l2l/). L2L was developedby graduate student John Newman and Alan Weiner, Professor of Biochemistry,to take the bias out of gene expression microarray studies.
Strawberry DNA Real estate magnate isolates DNA from strawberry under watchful eye of Biochemistry graduate student Michelle Baranski

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2004 Foresight Institute Feynman Prize in Nanotechnology