Department of Chemistry
Assistant Professor
(Physical Chemistry, Ph.D., MIT, 2004 )
Our research program aims to understand the ultrafast structural dynamics of light-driven chemical and biological processes in solution. We study how transient molecular configurations on relevant electronic surfaces and their interactions with the surrounding solvent dictate the course of chemical reactions. Our goal is to design experiments that are sensitive to the details of the electronic and atomic structural rearrangements as the reaction of interest evolves over decades in time.
Current problems of interest include (i) mapping intra and inter-molecular vibrational phase and energy relaxation on excited electronic states during charge transfer processes and photolysis in solution (ii) deciphering the electronic and structural basis for light-induced molecular changes in coordination compounds in the condensed phase and (iii) unraveling the complex interactions between natural chromophores and their protein hosts that leads to optical signals being converted to large scale atomic motions. These problems are important both from a basic science perspective and for designing new materials and molecular devices.
To study these problems, we use and develop multidimensional vibrational and electronic spectroscopies along with ultrafast x-ray absorption spectroscopy. Multidimensional spectroscopy probes time-dependent vibrational and electronic couplings and relative orientations between interacting chemical moieties. These observables quantify physical parameters of the chemical system, such as conformational heterogeneity, phase and energy relaxation dynamics and solute-solvent interactions. Ultrafast x-ray absorption spectroscopy is an ideal tool for understanding local time-dependent phenomena accompanying chemical processes in solution as it provides element-specific information about electronic and structural rearrangements with sub-angstrom resolution. The x-ray experiments are performed at the Advanced Light Source located at Lawrence Berkeley National Laboratory.
M. Khalil, M. A. Marcus, A. L. Smeigh, J. K. McCusker, H. H. W. Chong, and R. W. Schoenlein. "Picosecond X-Ray Absorption Spectroscopy of a Photoinduced Iron(II) Spin Crossover Reaction in Solution." Journal of Physical Chemistry A 110: 38 (2006).
H. S. Chung, M. Khalil, A. W. Smith, Z. Ganim, and A. Tokmakoff. "Conformational Changes During the Nanosecond-to-Millisecond Unfolding of Ubiquitin." Proceedings Of The National Academy Of Sciences Of The United States Of America 102: 612 (2006).
M. Khalil, N. Demirdöven, and A. Tokmakoff. "Vibrational Coherence Transfer Characterized with Fourier-Transform 2D IR Spectroscopy." Journal Of Chemical Physics 121: 362 (2004).
M. Khalil, N. Demirdöven, and A. Tokmakoff. "Coherent 2D IR Spectroscopy: Molecular Structure and Dynamics in Solution." Journal Of Physical Chemistry A 107: 5258 (2003).
M. Khalil, N. Demirdöven, and A. Tokmakoff. "Obtaining Absorptive Line Shapes in Two-Dimensional Infrared Vibrational Correlation Spectra." Physical Review Letters 90: 47401 (2003).
Camille and Henry Dreyfus Foundation New Faculty Award 2007
Miller Research Fellowship 2004
Lester Wolfe Graduate Fellowship 2002