|
valout_nc_geo.f.html |
 |
|
Source file: valout_nc_geo.f
|
|
Directory: /Users/rjl/git/rjleveque/clawpack-4.6.3/geoclaw/2d/lib
|
|
Converted: Mon Jan 21 2013 at 20:15:58
using clawcode2html
|
|
This documentation file will
not reflect any later changes in the source file.
|
c
c -----------------------------------------------------
c Routine to write netcdf files in the classic format
! #jj-2011.02.04
! # Each file written by the fortran code has
! # Dimensions:
! # timedimension : UNLIMITED
! # meqn : The number of equations
! # dimx_ : X dimension for grid number
! # dimy_ : Y dimension for grid number
! # Variables:
! # timedimension : Stores the time of the frame
! # ngrids : Number of grids in this frame
! # naux : Number of Auxilary Variables
! # ndim : Number of Dimensions in the frame
! # grid_ : A grid of (dimx,dimy,meqn)
! # Attributes:
! # (grid_) gridno : The number of this grid
! # level : The AMR level
! # dim_names : a list of dimensions [dimx,dimy]
! # dim.low : The lowest dimension value
! # dim.d : The distance between grid points
c -----------------------------------------------------
c
subroutine valout (lst, lend, time, nvar, naux)
c
implicit double precision (a-h,o-z)
character*10 matname1, matname2
include "call.i"
include 'netcdf.inc'
real(kind=8) time
integer ncid,rcode
integer timeid,tVarID,meqnID,ngridsVarID,nauxVarID,ndimVarID
integer dimxid,dimyid,xlowid,ylowid,dxid,dyid
integer gridid
integer ntimes
character*2 gridstr
character*40 dim_names
REAL, ALLOCATABLE ::grid(:,:,:)
real dx,dy,xlow,ylow
iadd(i,j,ivar) = loc + i - 1 + mitot*((ivar-1)*mjtot+j-1)
iaddaux(i,j,iaux) = locaux + i - 1 + mitot*((iaux-1)*mjtot+j-1)
ntimes=1
c ::::::::::::::::::::::::::: VALOUT ::::::::::::::::::::::::::::::::::;
c graphics output of soln values for contour or surface plots.
c modified for GeoClaw to output the surface level along with q.
c surface = q(i,j,1) + aux(i,j,1)
c :::::::::::::::::::::::::::::::::::::;:::::::::::::::::::::::::::::::;
c
c ### MATLAB graphics output
c
if (matlabout) then
c ### make the file names and open output files
matname1 = 'fort.qxxxx'
matname2 = 'fort.txxxx'
matunit1 = 50
matunit2 = 60
nstp = matlabu
do 55 ipos = 10, 7, -1
idigit = mod(nstp,10)
matname1(ipos:ipos) = char(ichar('0') + idigit)
matname2(ipos:ipos) = char(ichar('0') + idigit)
nstp = nstp / 10
55 continue
!!!!Define netcdf file
rcode=NF_CREATE(matname1//'.nc',NF_NOCLOBBER,ncid)
if(rcode.ne.NF_NOERR) print *,'ERROR OPENING NETCDF FILE'
rcode=NF_DEF_DIM(ncid,'timedimension',NF_UNLIMITED,timeid)
rcode=NF_DEF_VAR(ncid,'timedimension',NF_FLOAT,1,timeid,tVarID)
rcode=NF_DEF_DIM(ncid,'meqn',nvar+1,meqnid)
rcode=NF_DEF_VAR(ncid,'ngrids',NF_INT,0,0,ngridsVarID)
rcode=NF_DEF_VAR(ncid,'naux',NF_INT,0,0,nauxVarID)
rcode=NF_DEF_VAR(ncid,'ndim',NF_INT,0,0,ndimVarID)
rcode=NF_ENDDEF(ncid)
! rcode=NF_CLOSE(ncid)
if(rcode.ne.NF_NOERR) print *,'ERROR LEAVING DEFINE MODE'
level = lst
ngrids = 0
65 if (level .gt. lfine) go to 90
mptr = lstart(level)
70 if (mptr .eq. 0) go to 80
ngrids = ngrids + 1
nx = node(ndihi,mptr) - node(ndilo,mptr) + 1
ny = node(ndjhi,mptr) - node(ndjlo,mptr) + 1
loc = node(store1, mptr)
locaux = node(storeaux,mptr)
mitot = nx + 2*nghost
mjtot = ny + 2*nghost
xlow = rnode(cornxlo,mptr)
ylow = rnode(cornylo,mptr)
rcode=NF_REDEF(ncid)
if(rcode.ne.NF_NOERR) print *,'ERROR REDEFINE MODE'
write(gridstr,67) mptr
67 format(I2.2)
rcode=NF_DEF_DIM(ncid,'dimx_'//trim(gridstr),nx,dimxid)
if(rcode.ne.NF_NOERR) print *,'ERROR DEFINE DIMS'
rcode=NF_DEF_DIM(ncid,'dimy_'//trim(gridstr),ny,dimyid)
if(rcode.ne.NF_NOERR) print *,'ERROR DEFINE DIMS'
rcode=NF_DEF_Var(ncid,'grid_'//trim(gridstr),NF_FLOAT,4,
& (/dimxid,dimyid,meqnid,timeid/),gridid)
if(rcode.ne.NF_NOERR) print *,'ERROR DEFINE VAR'
rcode=NF_PUT_ATT_INT(ncid,gridid,'gridno',NF_INT,1,
& mptr)
rcode=NF_PUT_ATT_INT(ncid,gridid,'level',NF_INT,1,level)
dim_names="['dimx','dimy']"
rcode=NF_PUT_ATT_TEXT(ncid,gridid,'dim_names',
& LEN_TRIM(dim_names),TRIM(dim_names))
rcode=NF_PUT_ATT_REAL(ncid,gridid,'dimx.lower',NF_DOUBLE,
& 1,xlow)
rcode=NF_PUT_ATT_REAL(ncid,gridid,'dimy.lower',NF_DOUBLE,
& 1,ylow)
dx=hxposs(level)
dy=hyposs(level)
rcode=NF_PUT_ATT_REAL(ncid,gridid,'dimx.d',NF_FLOAT,1,
& dx)
rcode=NF_PUT_ATT_REAL(ncid,gridid,'dimy.d',NF_FLOAT,1,
& dy)
rcode=NF_ENDDEF(ncid)
allocate(grid(nx,ny,nvar+1))
!!! with netcdf4 we can have groups that will encapsulate all of this data, but for now....use the netcdf3 format "universal" with scientific python
do j = nghost+1, mjtot-nghost
do i = nghost+1, mitot-nghost
do ivar=1,nvar+1
if (ivar .eq. 4) then
surface = alloc(iadd(i,j,1)) + alloc(iaddaux(i,j,1))
grid(i-nghost,j-nghost,4) = surface
else
if (dabs(alloc(iadd(i,j,ivar))) .lt. 1d-90) then
alloc(iadd(i,j,ivar)) = 0.d0
endif
grid(i-nghost,j-nghost,ivar)=alloc(iadd(i,j,ivar))
endif
enddo
enddo
enddo
rcode=NF_PUT_VARA_REAL(ncid,gridid,(/1,1,1,1/),
& (/nx,ny,nvar+1,1/),grid)
deallocate(grid)
109 format(4e26.16)
mptr = node(levelptr, mptr)
go to 70
80 level = level + 1
go to 65
90 continue
rcode=NF_PUT_VAR_DOUBLE(ncid,tVarID,time)
if(rcode.ne.NF_NOERR) print *,'ERROR Write Time'
rcode=NF_PUT_VAR_INT(ncid,ngridsVarID,int(ngrids))
if(rcode.ne.NF_NOERR) print *,'ERROR Write GridNo'
rcode=NF_PUT_VAR_INT(ncid,nauxVarID,3)
rcode=NF_PUT_VAR_INT(ncid,ndimVarID,2)
rcode=NF_CLOSE(ncid)
write(6,601) matlabu,time
601 format('GeoClaw: Frame ',i4,
& ' output files done at time t = ', d12.6,/)
matlabu = matlabu + 1
endif
return
end