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2009
Research Apprenticeship Program

Spring and Autumn Quarters

last modified 9-29-2009

For Undergraduates and Post-Baccalaureates

2009 RESEARCH APPRENTICESHIPS

SPRING QUARTER
10 weeks, March 30 - June 5, Application review Jan. 10

AUTUMN QUARTER
11 weeks, Sept. 28 - December 11, Application review July 1

Apprenticeship FAQs

With funding from the Howard Hughes Medical Institute, the Mary Gates Endowment, and other sources, Friday Harbor Laboratories (FHL) is pleased to offer research training opportunities for undergraduates and recent post-baccalaureates. 

The program's parameters:

 Intensive research training experience, undergraduate credits from University of Washington.

 Students facing financial constraints in any quarter may apply for financial assistance from FHL. Awards are based on both financial need and academic merit.

 Students from University of Washington may be eligible for funding from the Mary Gates Endowment for Students ($3000 for a 15-credit FHL research apprenticeship or $1200 for a 6-credit research apprenticeship).

 Students from University of Washington, Gonzaga University, Oregon State University, Montana State University and University of Montana might be eligible for support from Howard Hughes Medical Institute.

 Live and work at Friday Harbor Laboratories, world-renowned marine science research facility on 484-acre biological preserve, San Juan Island, Washington (75 miles northwest of Seattle).

 Excellent student/faculty ratio: Each team of 5-16 students led by 1-3 faculty mentors plus 1-2 Research Assistants (RAs are grad students or post-docs).

Intensive, full-time research training experiences are offered to qualified undergraduates and post-baccalaureates in Spring and Autumn quarters. One to four teams of 5-16 students each work on one focused research problem guided by a group of faculty, postdoctoral and graduate student mentors.

Applications are due on January 10th for Spring Quarter teams and July 1st for Autumn Quarter. Students will be registered for credits through Universit of Washington. Students should consult with their advisor prior to registration.

The Research Apprenticeship Teams at Friday Harbor Laboratories were awarded the University of Washington
BROTMAN AWARD
FOR INSTRUCTIONAL EXCELLENCE

for outstanding collaborative achievements in teaching and fostering excellent learning.

"This award recognizes a program that gives University of Washington undergraduates a research experience of unique intensity, focus and independence. The Friday Harbor formula - three months at a superb marine biology field station, small research teams, dedicated faculty mentors - changes students' lives and launches careers in research."

Applications are welcome from undergraduates or post-baccalaureates from any academic institution. Applicants do not need to be currently enrolled at the University of Washington or at any other university or college. See Application Information for further details.

Comments from Research Apprentices

In a survey of all past Research Apprentices, 93% rated the value of the program to their career as "Excellent" or "Very Good."

"These apprenticeship courses are fantastic. They allow the student to actually participate in scientific research and show us the way to learn more than we had thought possible in one quarter."

"I would not trade the experience for anything. It changed how I view science completely."

"I learned how to collaborate with a group and work independently, gained experience in various scientific techniques and wrote my first scientific paper."

"I am so glad I had the opportunity to come here, it is the highlight of my year and something I never could have imagined beforehand. I feel privileged to have studied here."

"This is an ideal place to study, live and research."

"A wonderful and inspirational introduction to research!"

"It was an incredible experience ... It gave me the passion to stick with biology - the real work is not out of a textbook and my time at FHL really made that clear."

"I really can do independent research!"

"With the small class size I was able to interact with the professors and RAs at a level I've never known before."

"Just an absolutely amazing experience - and fun!"

"Great facilities, nice community, beautiful location, all the equipment!"

"The community at FHL has been a wonderful part of this experience. Living with people who love science and come to science with different backgrounds and perspectives has been wonderful. I have never been involved in a course I have loved so much and in which I have learned so much."

"It was great to have so much personal attention in this small group ... Gained great experience in giving presentations and presenting scientific papers ... I am proud of what I have learned and achieved."

"I consider my experience at FHL to be the most valuable of my academic career."


SPRING QUARTER 2009
Application review begins January 10, 2009

Applications will be accepted after the stated deadline if space is available. If past deadline please e-mail Stacy Markman or call 206-616-0753 to inquire.

Marine Benthic Ecology
Biology 499 (6 credits)

Part of the "ZooBot Quarter" at Friday Harbor Labs consisting of three courses, 16 total credits:
1) Marine Benthic Ecology Research Apprenticeship (Biol 499, 6 credits)
2) Marine Zoology (Biol 430, 5 credits) and
3) Marine Botany (Biol 455, 5 credtis).
Co-registration required in all three courses.
Click here to learn more
about the ZooBot quarter.

Spring Quarter, Research Apprenticeship
March 30 - June 5, 2009 (10 weeks)
Mon-Fri, 8-5
Arrive Sunday, March 29 after 3 pm, depart Friday, June 5 after lunch.

Dr. Kevin Britton-Simmons
UW - Friday Harbor Laboratories

Dr. Megan Dethier
Department of Biology - University of Washington

The Marine Benthic Ecology (MBE) apprenticeship is designed to accompany the Marine Zoology and Marine Botany courses.

Meeting times: All quarter, integrated with Biol 430 and Biol 445; 5 days a week, all day.

This apprenticeship will take a broad approach to the study of the ecology of intertidal organisms. Apprentices will learn basic marine ecological principles through lectures and readings, receive a primer in ecological sampling design and statistics, and study the natural history of shoreline organisms on field trips. Each student will select an independent research topic to perform in the field, laboratory, or both; examples include interactions between introduced seaweeds and native herbivores, the adaptive significance of morphological variation in marine invertebrates, variation in rates of recruitment of juvenile clams onto beaches. The apprenticeship will be integrated with the Marine Zoology/Botany program; students must register for all three. Enrollment limited to 15 students.

Learning Objectives and Skills
At the end of this apprenticeship (and the two concurrent integrated biology courses), apprentices will:

Lecture topics

Enrollment limited to 16 students. Co-registration in Marine Zoology / Marine Botany is required.

Visit the Student Costs page for information about expenses you can anticipate.

For additional information contact: mdethier@u.washington.edu

Application instructions >>



Dynamics of Cellular Morphogenesis: Experiments and computer simulation

Biology 499
(15 credits)

Spring Quarter, Research Apprenticeship
March 30 - June 5, 2009 (10 weeks)
Mon-Fri, 8-5
Arrive Sunday, March 29 after 3 pm, depart Friday, June 5 after lunch.

Dr. Kristin Sherrard
Center for Cell Dynamics (CCD),
Friday Harbor Laboratories

Dr. Ed Munro
Center for Cell Dynamics (CCD),
Friday Harbor Laboratories

Dr. Francois Robin
The Developmental Biology Institute of Marseilles (IBDML)
Marseilles, France

Photo: Dr. Kristin Sherrard

Morphogenesis, the process by which embryonic cells build and elaborate tissues and organs, involves some of the most exquisite and complex behaviors that cells ever perform. Biologists have identified much of the molecular machinery that cells use to generate and transmit forces during morphogenesis. Modern molecular genetics allows us to perturb this machinery in very precise ways, and exciting new advances in microscopy allow us to observe the organization and dynamics of this machinery during cellular morphogenesis in both normal and perturbed embryos. But understanding how the cytoskeletal and adhesive machinery operates across many cells to generate these movements is a daunting task, requiring the integration of information both about sources of force generation and context of deformation in response to forces.

The goal of this course is to introduce students to a modern integrated approach to the study of cellular morphogenesis, one that combines advanced microscopy and molecular genetic perturbations with detailed computer simulations that predict global patterns of cell shape change and rearrangement from empirically motivated assumptions about local machinery. During the first part of the course, lectures and lab demonstrations will cover fundamental concepts in cell and developmental biology, microscopy, cell mechanics, etc., the basics of working with ascidian embryos, and introduce apprentices to using simulations as a way to explore complex cellular dynamics. During the second part of the course, apprentices will develop research projects with faculty members, focused on case studies of cellular morphogenesis, combining experimental and computational approaches. Some possible topics include: (1) cellular basis for ascidian neurulation; (2) role of adhesion in invagination; (3) contractile dynamics during cortical rotation in the zygote. In addition, we will help apprentices to develop skill at public scientific speaking by asking them to give weekly presentations, culminating in a final, public seminar presentation.

Prospective apprentices should have at least a year of calculus, an introductory biology course, a willingness to immerse themselves in a fascinating scientific problem and an enthusiastic determination to learn. We expect apprentices to come with a fundamental orientation towards either experimental or computational biology and to get from their peers and instructors a strong dose of what they don’t yet know.

Enrollment limited to 8 students.

For information about previous courses at the Center for Cell Dynamics, see www.celldynamics.org/celldynamics/courses/index.html

Additional information

Visit the Student Costs page for information about expenses you can anticipate.

Application instructions >>

 


Beam Reach Program: Marine Science and Sustainability School. This program will convene at UW-Friday Harbor Laboratories in spring and autumn quarters in 2009. They are separate programs which are not Research apprenticeships.

Beam Reach is an intensive 10-week-long "voyage" divided about equally between the Friday Harbor Labs and a sailing research vessel. Students conduct independent research projects that use bioacoustic techniques to explore endangered killer whales, their prey, and their environment. Our silent biodiesel-electric catamaran enables pioneering research and also offers adventure, collaborative and leadership training, sustainable technology demonstrations, and increased environmental awareness. Dr. Val Veirs and Dr. Jason Wood.

Please click here to visit the Beam Reach website with information about the program, its admission process and costs.


AUTUMN QUARTER 2009
Application review begins July 1, 2009

Pelagic Ecosystem Function in the San Juan Archipelago

Ocean 492 (15 credits)

Autumn Quarter, Research Apprenticeship
September 28 - December 11, 2009 (11 weeks)
Mon-Fri 8-5
Arrive Sunday, Sept. 27 after 3 pm, depart Friday, Dec. 11 after lunch.

Dr. Jan Newton
University of Washington

Breck Tyler
University of California, Santa Cruz

Dr. Sandra Parker-Stetter
University of Washington

The primary research objective of this course is to investigate the physical-biological coupling of oceanographic processes and biota in the San Juan Archipelago. This work is timely and important for several reasons:

In order to understand the functioning of the Basin's complex ecosystem, it is essential to determine which processes are predominant in shaping the physical environment. These will also determine directly the habitat available for prey and predator species. If these elements can be linked, it will be possible in the future to assess the status of regional biota by means of remote observing systems.

The primary educational goals of this course are to have apprentices examine the workings of a marine ecosystem from top to bottom in order to understand how coupling with oceanographic processes leads to spatial and temporal variation in biotic patterning. We used the natural laboratory of the waters adjacent to San Juan Island to begin to explore the mechanisms responsible for variability in the region. We will focus on two study sites in San Juan Channel, one in the dynamic outer Channel (near Cattle Pass) and the other in the broad inner Channel (northern end). Specifically, apprentices will be asked to:

  1. Develop and implement techniques to assess physical and biological oceanographic conditions in the Channel and investigate the relative importance of river versus oceanic forcing by comparison with long-term oceanographic data.
  2. Develop and implement techniques to assess distribution and abundance of principal prey species (zooplankton, fish) and attempt to link these with oceanographic patterns and processes.
  3. Develop and implement techniques to assess distribution and abundance of marine birds and mammals and investigate how oceanographic properties and processes (such as tidal forcing) affect the feeding habits of these top marine predators (following on the work of Zamon 2000; 2001).
Instructors are an interdisciplinary team. Dr. Jan Newton for oceanography (physical and biological) and Dr. Breck Tyler for upper trophic levels (seabirds, marine mammals) will be the lead instructors. Dr. Terrie Klinger has agreed to participate on average once per week to contribute knowledge of benthos, larvae, and local processes. We will recruit a graduate student RA from School of Aquatic and Fisheries Sciences to cover fish. We also plan to pull in a broad spectrum of guest lecturers, including other oceanographers, zoologists, and local experts. Enrollment limited to 12 apprentices.

For additional information contact: Dr. Jan Newton or Dr. Breck Tyler

Marine Environment Research Apprenticeship (see also Marine Biology Quarter)
Autumn Quarter, Research Apprenticeship
September 28 - December 11, 2009 (11 weeks)
Dr. Susan Thistle, Dr. Emily Carrington

6 credits through one of the following 5 course choices:
- Biol 479
- Fish 479
- Ocean 479
- Soc 499
- Envir 499 (the Envir 499 course in the Program on the Environment Department meets the Capstone Envir 491 requirement for University of Washington students, with permission)

This course guides students in independent research from a natural or social science perspective.  Students interested in a social science approach can select from such methods as interviews, surveys, participant observation, or analysis of already existing data.  They may observe meetings of local environmental groups, for example, or interview selected island residents.   Students interested in pursuing research in marine biology can select from a range of field and/or laboratory techniques.  The course will consist of a mix of group and individual meetings, concluding with presentations by students.

Co-registration is required in two other courses as part of the Marine Biology Quarter (3 courses, 16 total credits) at Friday Harbor Labs.

Click here to learn more
about the Marine Biology Quarter.


Research projects to be determined by student and faculty. Enrollment limited to 16 students.

For additional information contact: Dr. Susan Thistle or Dr. Emily Carrington.


Visit the Student Costs page for information about expenses you can anticipate.

Application instructions >>
Tom Kang, a former Research Apprentice, reported:

"Our lives were immersed in science, meal times were filled with discussion about the day's results and new experiments in progress. Students from across the country joined us for brief periods, all with unique and interesting subjects of study."

"If you apply yourself, your time at FHL will be filled with a period of intense growth and development as well as advancement of your skills as a scientist. Working in the tight knit community will redefine your understanding of a team concept and open your eyes to the potential that a focused group with a singular goal can have.''


Frequently Asked Questions about the Research Apprenticeship Program

Many answers to questions about the Research Apprenticeship program can be found in the general FAQs and student FAQs. The following information refers specifically to the Research Apprenticeship program.

What are the expenses?
Spring Quarter Costs
Autumn Quarter Costs

When are Research Apprenticeships offered?
Research apprenticeships are offered only in spring and autumn
quarters -- not in summer.

How can I get transcripts?
Follow instructions provided at the following University of Washington web site: http://washington.edu/students/reg/transcripts.html#Q1

How can I learn more about the apprenticeship program?
For additional information, please contact Stacy Markman, FHL Student Coordinator, at
fhladmin@u.washington.edu
or (206) 616-0753.

Application instructions >>

Review an article about the apprenticeship program.

2008 Apprenticeship descriptions.
2007 Apprenticeship descriptions.
2006 Apprenticeship descriptions.
2005 Apprenticeship descriptions.
2004 Apprenticeship descriptions.

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