Welcome to the L2L Microarray Analysis ToolA simple tool for discovering the hidden biological significance in microarray expression data. |
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| Results summary | View all lists in L2L MDB | View all genes in diab_neph_up |
| List Name | Notes | Total probes |
Expected matches |
Actual matches |
Fold Enrichment |
Binomial p-value |
|---|---|---|---|---|---|---|
| hdaci_colon_but12hrs_dn | Downregulated by butyrate at 12 hrs in SW260 colon carcinoma cells | 191 | 1.56 | 11 | 7.05 | 6.47e-07 |
| calres_mouse_neocortex_dn | Downregulated in the neocortex of aged (30-month) mice subjected to caloric restriction since young adulthood vs. age-matched controls | 71 | 0.58 | 6 | 10.35 | 2.70e-05 |
| hdaci_colon_allbut_dn | Downregulated by butyrate at any timepoint in SW260 colon carcinoma cells | 350 | 2.86 | 11 | 3.85 | 1.79e-04 |
| oxstress_breastca_up | Upregulated by H2O2, Menadione and t-BH in breast cancer cells | 71 | 0.58 | 5 | 8.62 | 3.02e-04 |
| ageing_brain_up | Age-upregulated in the human frontal cortex | 393 | 3.21 | 11 | 3.43 | 4.74e-04 |
| vegf_hmmec_up | Up-regulated at any time-point (3hrs, 6hrs, or 12hrs) follwing VEGF treatment of human myometrial microvascular endothelial cells | 126 | 1.03 | 6 | 5.83 | 6.34e-04 |
| brca1_dn | Downregulated by induction of BRCA1 in EcR-293 cells | 22 | 0.18 | 3 | 16.70 | 7.47e-04 |
| adip_vs_fibro_dn | Downregulated following 7-day differentiation of murine 3T3-L1 fibroblasts into adipocytes | 51 | 0.42 | 4 | 9.60 | 8.18e-04 |
| egf_hdmec_up | Up-regulated in human dermal (foreskin) microvascular endothelial cells that were stimulated to proliferate with prolonged EGF treatment, versus non-stimulated quiescent controls. | 96 | 0.78 | 5 | 6.38 | 1.20e-03 |
| cmv_dn | Downregulated by infection of fibroblasts with CMV | 144 | 1.18 | 6 | 5.10 | 1.27e-03 |
| adip_vs_preadip_dn | Downregulated in mature murine adipocytes (7 day differentiation) vs. preadipocytes (6 hr differentiation) | 65 | 0.53 | 4 | 7.54 | 2.03e-03 |
| hdaci_compilation_up | Compilation of upregulated genes from all HDAC-inhibitor-related lists | 474 | 3.87 | 11 | 2.84 | 2.11e-03 |
| elongina_ko_up | Upregulated in MES cells from elongin-A knockout mice | 163 | 1.33 | 6 | 4.51 | 2.37e-03 |
| tzd_adip_up | Upregulated by treatment of mature murine adipocytes with the PPARgamma agonist troglitazone | 10 | 0.08 | 2 | 24.49 | 2.87e-03 |
| ros_mouse_aorta_dn | Down-regulated in mouse aorta by chronic treatment with PPARgamma agonist rosiglitazone | 73 | 0.60 | 4 | 6.71 | 3.09e-03 |
| hdaci_colon_alltsa_up | Upregulated by TSA at any timepoint in SW260 colon carcinoma cells | 232 | 1.89 | 7 | 3.69 | 3.23e-03 |
| hdaci_colon_tsa12hrs_up | Upregulated by TSA at 12 hrs in SW260 colon carcinoma cells | 40 | 0.33 | 3 | 9.18 | 4.29e-03 |
| hdaci_colon_but24hrs_dn | Downregulated by butyrate at 24 hrs in SW260 colon carcinoma cells | 313 | 2.56 | 8 | 3.13 | 4.64e-03 |
| hdaci_colon_but48hrs_dn | Downregulated by butyrate at 48 hrs in SW260 colon carcinoma cells | 326 | 2.66 | 8 | 3.00 | 5.88e-03 |
| ni2_mouse_dn | Downregulated by nickel(II) in sensitive A/J mouse lung tissue | 48 | 0.39 | 3 | 7.65 | 7.16e-03 |
| parp_ko_up | Upregulated in MEF cells from PARP knockout mice | 49 | 0.40 | 3 | 7.50 | 7.58e-03 |
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