Red Abalone Testis Transcriptome and Proteome

Follow the link below for raw mass spectrometry data, final amino acid sequence list, and transcriptome assembly file for Palmer et al. 2013. Raw sequencing reads are available in the NCBI Sequencing Read Database (accession no. SRR770266), and sequences used for codeml analysis are in GenBank (accession nos. KC752594 – KC752618).

https://aspera.gs.washington.edu/aspera/user/?B=%2Fgs%2Fswanson%2FPalmer_etal_2013

username: public-aspera1

password: pus123GS

Reference: Palmer, MR, McDowall, MH, Stewart, L, Ouaddi, A, MacCoss, MJ, Swanson, WJ. Mass spectrometry and next-generation sequencing reveal an abundant and rapidly evolving abalone sperm protein. Molecular Reproduction & Development, 2013.

Primate exome data

Raw sequencing reads, coding sequence assemblies, multiple sequence alignments and codeml output from our manuscript, Trans genomic capture and sequencing of primate exomes reveals new targets of positive selection, can be downloaded from the UW Genome Sciences Aspera server:

The primate exome data can be accessed from:

https://aspera.gs.washington.edu/aspera/user/?B=%2Fgs%2Fswanson%2Frdg-primate-exome-2011

username: public-aspera1

password: pus123GS

Reference: George RD, McVicker G, Diederich R, Ng SB, MacKenzie AP, Swanson WJ, Shendure J, Thomas JH. Trans genomic capture and sequencing of primate exomes reveals new targets of positive selection. Genome Res. 2011.