UWXAFS 3.0
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UWXAFS 3.0

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The following programs comprise the UWXAFS analysis package:

FEFFIT
Fit Chi(k) data to the theoretical calculations of FEFF, and assess the errors in the fitting parameters. The fitting is done in R-space, which allows spatial selection of the interesting and accessible contributions to the XAFS. The program allows the user to modify the FEFF calculations in a variety of ways so that the user can model many different types of systems.

ATOMS
Interpret space group configuration and write an input file for FEFF. Several experimental absorption corrections to XAFS data are also calculated.

AUTOBK
Evaluate and remove the background of raw absorption data, converting absorption, mu(E), to XAFS, Chi(k). The algorithm chooses the background that minimizes the low-R components of Chi(R), the Fourier Transform of Chi(k).

COPYDF
Copy some of the contents of one UWXAFS binary file to another.

LISTDF
List the contents of a UWXAFS binary file.

RATIO
Take the log-ratio of isolated Chi(k) data, and evaluate the cumulants of the distribution function.

REFORM
Convert data back and forth between UWEXAFS binary and ASCII column format.



The programs are currently distributed via the World Wide Web or anonymous ftp or on MS-DOS formatted floppy diskettes. The source code, as distributed, is ready for compilation on any Unix or Macintosh system. They are also ready for compilation on a DOS system, although most DOS compilers expect the file extension to be .for rather than .f. Versions of the code ready for compilation on either a Vax or Alpha machine running VMS are available on the Web (but not on diskette). The differences in the VMS versions are described in the Vax README file.

Here is a listing of the contants of the UWXAFS 3.0 package:

Source Codes
  1. feffit.f
  2. atoms.f
  3. autobk.f
  4. copydf.f
  5. listdf.f
  6. ratio.f
  7. reform.f

Documents
The files listed here can be found on the Documents page.

  1. Documentation for Feffit in PostScript or plain text formats
  2. Documentation for Atoms in PostScript, hypertext, or plain text formats
  3. Documentation for Autobk in PostScript or plain text formats
  4. Description of UWXAFS data files and documentation for Listdf, Copydf, and Reform in PostScript or hypertext format.
  5. Documentation for Ratio in plain text format
  6. PostScript or hypertext version of a paper by Ed Stern from the procedings ofthe XAFS VIII conference describing the UWXAFS package.

Tools
These are various utilities and example files that we include with the package. The items listed here, and several other goodies, can be found on the Tools page.

  1. a complete example of the use of the UWXAFS package. See Appendix A of the Autobk document and Appendix A of the Feffit document for details.
  2. several example atoms.inp files
  3. McBook - a compilation of the McMaster data
  4. feffit.el - an Emacs major mode for editing UWXAFS input files
  5. fd2fi - a utility for converting files.dat to feffit.inp

DOS Executables
Because many PC users do not have access to a reliable Fortran compiler, we have executable version of the programs listed above available for MS-DOS and Macintosh.


Restrictions, License, and Copyright Information

All of the programs in the UWXAFS 3.0 package are copyrighted software and a license from the University of Washington Office of Technology Transfer must be obtained for their use. This is necessary to protect the interests of users and the University of Washington. Both academic/non-profit and corporate licenses are available. New users should request the latest version of this code from the authors. The license may be obtained by writing to

UWXAFS Project
c/o Edward Stern
Department of Physics, FM-15
University of Washington
Seattle, WA USA 98195
phone: (206) 685-4091
fax: (206) 543-9523
e-mail: stern@phys.washington.edu

Government Copyrights

The following is the text of the legal description of the copyright and licensing agreement entered into by the UWXAFS Project and its customers.

This work was supported in part by DOE Grant DE-FG06-90ER45425 and by
the Royalty Research Fund of the University of Washington. In
accordance with the DOE FAR rules part 600.33 "Rights in Technical
Data - Modified Short Form" the following clause applies to the
UWXAFS programs: 

(c)(1)The grantee agrees to and does hereby grant to the U.S. 
Government and to others acting on its behalf: 

  (i) A royalty-free, nonexclusive, irrevocable, world-wide license 
  for Governmental purposes to reproduce, distribute, display, and 
  perform all copyrightable material first produced or composed in 
  the performance of this grant by the grantee, its employees or any
  individual or concern specifically employed or assigned to 
  originate and prepare such material and to prepare derivative works
  based thereon, 
  
  (ii) A license as aforesaid under any and all copyrighted or
  copyrightable work not first produced or composed by the grantee 
  in the performance of this grant but which is incorporated in the
  material furnished under the grant, provided that such license 
  shall be only to the extent the grantee now has, or prior to 
  completion or close-out of the grant, may acquire the right to 
  grant such license without becoming liable to pay compensation to
  others solely because of such grant. 

(c)(2) The grantee agrees that it will not knowingly include any
material copyrighted by others in any written or copyrightable
material furnished or delivered under this grant without a license 
as provided for in paragraph (c)(1)(ii) of this section, or without 
the consent of the copyright owner, unless it obtains specific 
written approval of the Contracting Officer for the inclusion of 
such copyright material.  

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