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Philip Petra
Philip Petra
Emeritus Professor of Biochemistry

Research


Research in Dr. Petra’s group is directed at understanding steroid-protein interaction as it relates to the mechanism of action of steroid hormones and, more specifically, to the growth of normal steroid-dependent cells and cancer cells of the human prostate and breast. A long-range goal is to understand the role of the sex steroid-binding protein, SBP (also called sex hormone binding globulin, SHBG), a protein that specifically binds dihydrotestosterone DHT), testosterone (T), and 17ß-estradiol (E2) in the plasma of many species, including humans. Human SBP is known to control the metabolic clearance rates of T and E2, but two additional roles have also been proposed. One is to assist in the cell uptake of these hormones by interacting with a specific receptor on the plasma membrane of target cells forming a ternary complex with the steroid. This complex is thought either to endocytose the hormone into the cell, or to accelerate its diffusion by concentrating it onto the cell surface. Another role is the formation of the ternary E2/SBP/SBP-receptor complex that may function in signal transduction. These interesting but controversial proposals suggest that sex steroid hormones could control gene expression in two ways: First, through the classic steroid receptor mechanism, and second, by regulating the activity of steroid receptors through signal transduction.

Our strategy has been to determine the structure of the human protein to lead towards an understanding of its physiological function. The protein was cloned and expressed in BHK, COS-7, and insect cells, and in yeast. The steroid-binding site was mapped by affinity groupeling and site-directed mutagenesis. The group has sequenced human and rabbit SBPs by both protein sequencing methods and cDNA cloning. Our results indicate that human SBP is a 95K homodimeric glycoprotein that binds one molecule of steroid per dimer. Protein modeling based on hydrodynamic properties and electron microscopy reveals a rod-shaped molecule with a length and diameter of about 23 and 3 nm, respectively. The human monomer is a single-chain glycoprotein composed of 373 amino acids with oligosaccharide side-chains N-linked to Asn-351 and Asn-367, and O-linked to Thr-6. Circular dichroism measurements indicate that human SBP contains about 32% ß-structure, 13% alpha-helix, and 15% ß-turns. Met-139, Met-109, Lys-134, and Tyr-57 have been identified as functional residues in steroid binding. Rabbit SBP is also a homodimer but each monomer is shorter by 6 amino acid residues at the aminoterminus and lacks the O-linked oligosaccharide side-chain, the two N-linked oligosaccharide side-chains are located at the same homologous positions as those in the human protein. Rabbit SBP binds both DHT and T but, in contrast to the human protein, has a markedly reduced affinity for E2. The two proteins are homologous with 79 % identity in amino acid sequence. Recently, the crystal structure of an approximately 50% truncated version of the human protein (residues 13-188) has been solved (Grishkovskaya et al. EMBO J. 19:504, 2000). The results confirmed the presence of Met-107, Met-139, and Tyr-57 in the steroid binding site, but revealed a dimer having two steroid binding sites instead of one, as is the case for the native protein. More recently, we have determined that R140 and I141 are key determinants for the specific binding of 17ß-estradiol. These two residues are required for sustaining the right proximity of the phenyl ring of F56 to ring A of 17ß-estradiol thus optimizing its affinity to human SBP. The mutant binds T as tightly as rabbit SBP and has a greatly reduced E2 binding affinity.

SBPbindsE2 Amino acid residues R140 and I141 are required for optimal binding of human sex steroid-binding protein (SBP) to estradiol (E2). Stereopair. Purple is the native protein and green is the mutant M107I/R141K/I141L, yellow represents E2 bound to native SBP, and red represents E2 bound to the mutant. The A ring of E2 is located near F56. The sole replacement M107I does not affect E2 binding.

The problems presently under study are crystallization trials of the full-length yeast-expressed SBP for the initiation of X-ray diffraction studies. Because the crystal structure of the truncated version of human SBP binds two molecules of steroid per dimer instead of one as in the case of the native protein, we believe that the yet structurally-uncharacterized C-terminal domain plays a role in negative cooperativity of steroid binding in the context of the entire molecule. A crystal structure of the native protein is thus needed to fully understand the steroid binding mechanism of human SBP.

Selected Publications

“Arginine-140 and Isoleucine-141 determine the 17ß-estradiol-binding specificity of the sex steroid-binding protein (SBP or SHBG) of human plasma.” Petra P.H., Adman E.T., Orr W.R., Woodcock K.T., Groff C., and Sui L-M. Protein Sci 10:1811-1821 (2001).

“The sex steroid binding protein (SBP or SHBG) of human plasma: Identification of Tyr-57 and Met-107 in the steroid binding site.” Petra P.H., Woodcock K.T., Orr W.R., Nguyen D.K., and Sui L-M. J. Steroid Biochem. Mol. Biol. 75:139-145 (2000).

“Interactions of [F-18]-Fluoroestradiol (FES) with Sex Steroid Binding Protein (SBP)”. Tewson T. J., Mankoff D.A., Peterson . L.M., Woo I., Petra P. H. Nuclear Medicine and Biology 26:905-913 (1999).

“Heterologous expression of wild type and deglycosylated human plasma sex steroid-binding protein (SBP or SHBG) in the yeast, Pichia pastoris. Characterization of the recombinant proteins”. Sui L.M., Lennon J., Ma C., McCann I., Woo I., and Pétra P.H. J. Steroid Biochem. Mol. Biol. 68:119-127 (1999).

“Secondary Structure and Shape of the Plasma Sex Steroid-Binding Protein. Comparison with Domain G of Laminin results in a structural Model of Plasma Sex Steroid-Binding Protein”. K. Beck, T. Gruber, C. Ridgway, W. Hughes, L.M. Sui, and P. H. Petra. European J. Biochem. 247:339-347 (1997).

“Over-expression of Human Sex Steroid-Binding Protein (hSBP/hABP or hSHBG) in Insect Cells infected with a Recombinant Baculovirus. Characterization of the Recombinant Protein and Comparison to the Plasma Protein.” Sui L.M., Wong C., and Petra P.H. J. Steroid Biochem. Mol. Biol. 52:173-179 (1995).

“Localization of the steroid-binding site of the human sex steroid-binding protein of plasma (SBP or SHBG) by site-directed mutagenesis.” Sui L. M., Cheung A., Namkung P., and Petra P. H. FEBS letters 310:115-118 (1992).

“The plasma sex steroid-binding protein (SBP or SHBG). A critical review of recent developments on the structure, molecular biology, and function.” Petra P.H. J. Steroid Biochem. Mol. Biol. 40, 735-753 (1991).

“Identification of Lysine-134 in the steroid binding site of the Sex Steroid Binding Protein of human Plasma.” Namkung P.C., Kumar S., Walsh K.A., Petra P.H. J. Biol. Chem. 265:18345-18350 (1990).

“The amino acid sequence of the sex steroid-binding protein of rabbit serum.” Griffin P. R., Kumar S., Shabanowitz J., Charbonneau H., Namkung P. C., Walsh K. A., Hunt D. F., and Petra P. H. J. Biol. Chem. 264:19066-19075 (1989).

“Amino acid sequence of the sex steroid-binding protein (SBP) of human blood plasma.” Walsh K.A., Titani K., Kumar S., Hayes R., and Petra P.H. Biochemistry 25, 7584-7590 (1986).