{"id":265,"date":"2019-10-21T23:04:49","date_gmt":"2019-10-21T23:04:49","guid":{"rendered":"http:\/\/depts.washington.edu\/keck\/wordpress\/?page_id=265"},"modified":"2021-12-04T00:51:41","modified_gmt":"2021-12-04T00:51:41","slug":"image-analysis","status":"publish","type":"page","link":"https:\/\/depts.washington.edu\/keck\/image-analysis\/","title":{"rendered":"Image Analysis"},"content":{"rendered":"\n<h3 class=\"wp-block-heading\">Image Processing Software and Workstations<\/h3>\n\n\n\n<p>The Keck Center maintains 2 PC workstations for image processing and analysis.<\/p>\n\n\n\n<h4 class=\"wp-block-heading\">Analysis &#8211; IMARIS<\/h4>\n\n\n\n<ul class=\"wp-block-list\"><li>Puget Systems AMD Threadripper TRX40 ATX workstation with 24-core processor, 4x Crucial DDR4-3200 32GB RAM (128GB total), Samsung Pro and EVO SSD hard drives, and a NVIDIA GeForce RTX 3070 8GB Founders Edition graphics card<\/li><li>IMARIS full license with surface, spot, vantage, particle tracking, co-localization, XT, cell, filament (neuron &amp; vessel), deconvolution, batch processing, and animation modules <\/li><li>Free for UW students (UWSTF-funded), Image Analysis Rate applies for non-students<\/li><li>Reservations required <\/li><\/ul>\n\n\n\n<figure class=\"wp-block-image size-large\"><img loading=\"lazy\" decoding=\"async\" width=\"1024\" height=\"768\" src=\"https:\/\/depts.washington.edu\/keck\/wordpress\/wp-content\/uploads\/2021\/12\/IMG_6066-1-1024x768.jpg\" alt=\"\" class=\"wp-image-817\" srcset=\"https:\/\/depts.washington.edu\/keck\/wordpress\/wp-content\/uploads\/2021\/12\/IMG_6066-1-1024x768.jpg 1024w, https:\/\/depts.washington.edu\/keck\/wordpress\/wp-content\/uploads\/2021\/12\/IMG_6066-1-300x225.jpg 300w, https:\/\/depts.washington.edu\/keck\/wordpress\/wp-content\/uploads\/2021\/12\/IMG_6066-1-768x576.jpg 768w, https:\/\/depts.washington.edu\/keck\/wordpress\/wp-content\/uploads\/2021\/12\/IMG_6066-1-1536x1152.jpg 1536w, https:\/\/depts.washington.edu\/keck\/wordpress\/wp-content\/uploads\/2021\/12\/IMG_6066-1-2048x1536.jpg 2048w, https:\/\/depts.washington.edu\/keck\/wordpress\/wp-content\/uploads\/2021\/12\/IMG_6066-1-1600x1200.jpg 1600w\" sizes=\"auto, (max-width: 1024px) 100vw, 1024px\" \/><\/figure>\n\n\n\n<h4 class=\"wp-block-heading\">Analysis FIJI &#8211; LASX<\/h4>\n\n\n\n<ul class=\"wp-block-list\"><li>Dell Precision T1700 basic workstation&nbsp;<\/li><li>FIJI (ImageJ) software <\/li><li>LASX software (basic)<ul><li>Manual fluorescence analysis<\/li><li>Co-localization<\/li><li>3D viewer<\/li><li>TIFF exporting<\/li><li>Color merges<\/li><li>File management<\/li><\/ul><\/li><li>This workstation is free to use for images acquired at the Keck Center <\/li><li>Reservations are required<\/li><\/ul>\n\n\n\n<figure class=\"wp-block-image\"><img loading=\"lazy\" decoding=\"async\" width=\"1024\" height=\"768\" src=\"https:\/\/depts.washington.edu\/keck\/wordpress\/wp-content\/uploads\/2019\/10\/Analysis-FIJI-LASX-1024x768.jpg\" alt=\"\" class=\"wp-image-421\" srcset=\"https:\/\/depts.washington.edu\/keck\/wordpress\/wp-content\/uploads\/2019\/10\/Analysis-FIJI-LASX-1024x768.jpg 1024w, https:\/\/depts.washington.edu\/keck\/wordpress\/wp-content\/uploads\/2019\/10\/Analysis-FIJI-LASX-300x225.jpg 300w, https:\/\/depts.washington.edu\/keck\/wordpress\/wp-content\/uploads\/2019\/10\/Analysis-FIJI-LASX-768x576.jpg 768w, https:\/\/depts.washington.edu\/keck\/wordpress\/wp-content\/uploads\/2019\/10\/Analysis-FIJI-LASX-1600x1200.jpg 1600w\" sizes=\"auto, (max-width: 1024px) 100vw, 1024px\" \/><\/figure>\n","protected":false},"excerpt":{"rendered":"<p>Image Processing Software and Workstations The Keck Center maintains 2 PC workstations for image processing and analysis. Analysis &#8211; IMARIS&hellip;<\/p>\n","protected":false},"author":4,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-265","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/depts.washington.edu\/keck\/wp-json\/wp\/v2\/pages\/265","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/depts.washington.edu\/keck\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/depts.washington.edu\/keck\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/depts.washington.edu\/keck\/wp-json\/wp\/v2\/users\/4"}],"replies":[{"embeddable":true,"href":"https:\/\/depts.washington.edu\/keck\/wp-json\/wp\/v2\/comments?post=265"}],"version-history":[{"count":14,"href":"https:\/\/depts.washington.edu\/keck\/wp-json\/wp\/v2\/pages\/265\/revisions"}],"predecessor-version":[{"id":824,"href":"https:\/\/depts.washington.edu\/keck\/wp-json\/wp\/v2\/pages\/265\/revisions\/824"}],"wp:attachment":[{"href":"https:\/\/depts.washington.edu\/keck\/wp-json\/wp\/v2\/media?parent=265"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}