{"id":5508,"date":"2020-03-27T16:20:58","date_gmt":"2020-03-27T23:20:58","guid":{"rendered":"https:\/\/depts.washington.edu\/pandemicalliance\/?p=5508"},"modified":"2021-03-02T16:21:56","modified_gmt":"2021-03-03T00:21:56","slug":"haplotype-networks-of-sars-cov-2-infections-in-the-diamond-princess-cruise-ship-outbreak","status":"publish","type":"post","link":"https:\/\/depts.washington.edu\/pandemicalliance\/2020\/03\/27\/haplotype-networks-of-sars-cov-2-infections-in-the-diamond-princess-cruise-ship-outbreak\/","title":{"rendered":"Haplotype networks of SARS-CoV-2 infections in the Diamond Princess cruise ship outbreak."},"content":{"rendered":"<ul>\n<li style=\"font-weight: 400\"><span style=\"font-weight: 400\">The authors performed whole genome sequencing of SARS-CoV-2 from PCR-positive specimens obtained from the Diamond Princess cruise ship, suggesting that dissemination likely originated from a single introduction event before quarantine was initiated.<\/span><\/li>\n<li style=\"font-weight: 400\"><span style=\"font-weight: 400\">This study demonstrates the usefulness of haplotype network analysis in identifying potential infection routes.<\/span><\/li>\n<\/ul>\n<p><i><span style=\"font-weight: 400\">Sekizuka et al. (Mar 27, 2020). Haplotype networks of SARS-CoV-2 infections in the Diamond Princess cruise ship outbreak. Pre-print downloaded Mar 27 from <\/span><\/i><a href=\"https:\/\/doi.org\/10.1101\/2020.03.23.20041970\"><span style=\"font-weight: 400\">https:\/\/doi.org\/10.1101\/2020.03.23.20041970<\/span><\/a><i><span style=\"font-weight: 400\">\u00a0<\/span><\/i><\/p>\n","protected":false},"excerpt":{"rendered":"<p>The authors performed whole genome sequencing of SARS-CoV-2 from PCR-positive specimens obtained from the Diamond Princess cruise ship, suggesting that dissemination likely originated from a single introduction event before quarantine was initiated. This study demonstrates the usefulness of haplotype network analysis in identifying potential infection routes. Sekizuka et al. (Mar 27, 2020). Haplotype networks of&#8230;<\/p>\n<div><a class=\"more\" href=\"https:\/\/depts.washington.edu\/pandemicalliance\/2020\/03\/27\/haplotype-networks-of-sars-cov-2-infections-in-the-diamond-princess-cruise-ship-outbreak\/\">Read more<\/a><\/div>\n","protected":false},"author":8,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":"","_links_to":"","_links_to_target":""},"categories":[6],"tags":[],"topic":[23],"class_list":["post-5508","post","type-post","status-publish","format-standard","hentry","category-article-summary","topic-modeling-and-prediction"],"_links":{"self":[{"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/posts\/5508","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/users\/8"}],"replies":[{"embeddable":true,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/comments?post=5508"}],"version-history":[{"count":1,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/posts\/5508\/revisions"}],"predecessor-version":[{"id":5509,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/posts\/5508\/revisions\/5509"}],"wp:attachment":[{"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/media?parent=5508"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/categories?post=5508"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/tags?post=5508"},{"taxonomy":"topic","embeddable":true,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/topic?post=5508"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}