{"id":5818,"date":"2020-04-09T13:43:33","date_gmt":"2020-04-09T20:43:33","guid":{"rendered":"https:\/\/depts.washington.edu\/pandemicalliance\/?p=5818"},"modified":"2021-03-05T13:44:34","modified_gmt":"2021-03-05T21:44:34","slug":"lamp-seq-population-scale-covid-19-diagnostics-using-a-compressed-barcode-space","status":"publish","type":"post","link":"https:\/\/depts.washington.edu\/pandemicalliance\/2020\/04\/09\/lamp-seq-population-scale-covid-19-diagnostics-using-a-compressed-barcode-space\/","title":{"rendered":"LAMP-Seq: Population-Scale COVID-19 Diagnostics Using a Compressed Barcode Space"},"content":{"rendered":"<ul>\n<li style=\"font-weight: 400\"><span style=\"font-weight: 400\">Schmid et al <\/span><span style=\"font-weight: 400\">propose using LAMP-Seq, a barcoded <\/span><span style=\"font-weight: 400\">Reverse-Transcription Loop-mediated Isothermal Amplification <\/span><span style=\"font-weight: 400\">(RT-LAMP) protocol that could dramatically reduce the cost and complexity of population-scale testing of COVID-19. Given the low cost and scalability of next-generation sequencing, the team believes that this method could be affordably scaled to analyze millions of samples per day using existing sequencing infrastructure.<\/span><\/li>\n<\/ul>\n<p><i><span style=\"font-weight: 400\">Schmid et al. (April 6, 2020). LAMP-Seq: Population-Scale COVID-19 Diagnostics Using a Compressed Barcode Space. Preprint downloaded April 9 from<\/span><\/i> <a href=\"https:\/\/doi.org\/10.1101\/2020.04.06.025635\"><span style=\"font-weight: 400\">https:\/\/doi.org\/10.1101\/2020.04.06.025635<\/span><\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Schmid et al propose using LAMP-Seq, a barcoded Reverse-Transcription Loop-mediated Isothermal Amplification (RT-LAMP) protocol that could dramatically reduce the cost and complexity of population-scale testing of COVID-19. Given the low cost and scalability of next-generation sequencing, the team believes that this method could be affordably scaled to analyze millions of samples per day using existing&#8230;<\/p>\n<div><a class=\"more\" href=\"https:\/\/depts.washington.edu\/pandemicalliance\/2020\/04\/09\/lamp-seq-population-scale-covid-19-diagnostics-using-a-compressed-barcode-space\/\">Read more<\/a><\/div>\n","protected":false},"author":8,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":"","_links_to":"","_links_to_target":""},"categories":[6],"tags":[],"topic":[19],"class_list":["post-5818","post","type-post","status-publish","format-standard","hentry","category-article-summary","topic-testing-and-treatment"],"_links":{"self":[{"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/posts\/5818","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/users\/8"}],"replies":[{"embeddable":true,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/comments?post=5818"}],"version-history":[{"count":1,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/posts\/5818\/revisions"}],"predecessor-version":[{"id":5819,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/posts\/5818\/revisions\/5819"}],"wp:attachment":[{"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/media?parent=5818"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/categories?post=5818"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/tags?post=5818"},{"taxonomy":"topic","embeddable":true,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/topic?post=5818"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}