{"id":6863,"date":"2020-05-15T17:32:35","date_gmt":"2020-05-16T00:32:35","guid":{"rendered":"https:\/\/depts.washington.edu\/pandemicalliance\/?p=6863"},"modified":"2021-03-17T17:33:19","modified_gmt":"2021-03-18T00:33:19","slug":"rapid-implementation-of-real-time-sars-cov-2-sequencing-to-investigate-healthcare-associated-covid-19-infections","status":"publish","type":"post","link":"https:\/\/depts.washington.edu\/pandemicalliance\/2020\/05\/15\/rapid-implementation-of-real-time-sars-cov-2-sequencing-to-investigate-healthcare-associated-covid-19-infections\/","title":{"rendered":"Rapid Implementation of Real-Time SARS-CoV-2 Sequencing to Investigate Healthcare-Associated COVID-19 Infections"},"content":{"rendered":"<ul>\n<li data-leveltext=\"\uf0b7\" data-font=\"Symbol\" data-listid=\"36\" data-aria-posinset=\"1\" data-aria-level=\"1\"><span data-contrast=\"auto\">Using a sequencing method with a sample-to-sequence delay of less than 24 hours, paired with a reporting system\u00a0<\/span><span data-contrast=\"auto\">that<\/span><span data-contrast=\"auto\">\u00a0integrates these genomic data with epidemiological data,\u00a0<\/span><span data-contrast=\"auto\">Meredith et al.\u00a0<\/span><span data-contrast=\"auto\">identified\u00a0<\/span><span data-contrast=\"auto\">both hospital and community clusters<\/span><span data-contrast=\"auto\">\u00a0among patients from a UK hospital<\/span><span data-contrast=\"auto\">.<\/span><span data-contrast=\"auto\">\u00a0In addition to detecting cryptic transmission events, t<\/span><span data-contrast=\"auto\">his real-time genomic surveillance approach was used to inform infection control and patient safety\u00a0<\/span><span data-contrast=\"auto\">practices.<\/span><span data-contrast=\"auto\">\u00a0\u00a0<\/span><span data-ccp-props=\"{&quot;134233279&quot;:true,&quot;201341983&quot;:0,&quot;335559739&quot;:160,&quot;335559740&quot;:259}\">\u00a0<\/span><\/li>\n<\/ul>\n<p><i><span data-contrast=\"none\">Meredith et al. (<\/span><\/i><i><span data-contrast=\"none\">May 15,\u00a0<\/span><\/i><i><span data-contrast=\"none\">2020). Rapid Implementation of Real-Time SARS-CoV-2 Sequencing to Investigate Healthcare-Associated COVID-19 Infections.\u00a0<\/span><\/i><i><span data-contrast=\"none\">Pre-print\u00a0downloaded May 15 from<\/span><\/i><i><span data-contrast=\"none\">\u00a0<\/span><\/i><a href=\"https:\/\/doi.org\/10.1101\/2020.05.08.20095687\"><i><span data-contrast=\"none\">https:\/\/doi.org\/10.1101\/2020.05.08.20095687<\/span><\/i><\/a><span data-ccp-props=\"{&quot;201341983&quot;:0,&quot;335559685&quot;:720,&quot;335559739&quot;:160,&quot;335559740&quot;:259}\">\u00a0<\/span><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Using a sequencing method with a sample-to-sequence delay of less than 24 hours, paired with a reporting system\u00a0that\u00a0integrates these genomic data with epidemiological data,\u00a0Meredith et al.\u00a0identified\u00a0both hospital and community clusters\u00a0among patients from a UK hospital.\u00a0In addition to detecting cryptic transmission events, this real-time genomic surveillance approach was used to inform infection control and patient safety\u00a0practices.\u00a0\u00a0\u00a0&#8230;<\/p>\n<div><a class=\"more\" href=\"https:\/\/depts.washington.edu\/pandemicalliance\/2020\/05\/15\/rapid-implementation-of-real-time-sars-cov-2-sequencing-to-investigate-healthcare-associated-covid-19-infections\/\">Read more<\/a><\/div>\n","protected":false},"author":8,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":"","_links_to":"","_links_to_target":""},"categories":[6],"tags":[],"topic":[19],"class_list":["post-6863","post","type-post","status-publish","format-standard","hentry","category-article-summary","topic-testing-and-treatment"],"_links":{"self":[{"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/posts\/6863","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/users\/8"}],"replies":[{"embeddable":true,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/comments?post=6863"}],"version-history":[{"count":1,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/posts\/6863\/revisions"}],"predecessor-version":[{"id":6864,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/posts\/6863\/revisions\/6864"}],"wp:attachment":[{"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/media?parent=6863"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/categories?post=6863"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/tags?post=6863"},{"taxonomy":"topic","embeddable":true,"href":"https:\/\/depts.washington.edu\/pandemicalliance\/wp-json\/wp\/v2\/topic?post=6863"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}