{"id":171,"date":"2021-10-20T03:30:27","date_gmt":"2021-10-20T03:30:27","guid":{"rendered":"http:\/\/depts.washington.edu\/scipos\/wordpress\/?p=171"},"modified":"2022-01-14T20:48:52","modified_gmt":"2022-01-14T20:48:52","slug":"grad-publications-dave-slager-c-j-battey","status":"publish","type":"post","link":"https:\/\/depts.washington.edu\/scipos\/wordpress\/2021\/10\/20\/grad-publications-dave-slager-c-j-battey\/","title":{"rendered":"Grad Publications: Dave Slager, C.J. Battey"},"content":{"rendered":"\n<p>As those who attended the Klicka lab talks at last year&#8217;s\u00a0<a href=\"https:\/\/biogss.wordpress.com\/\">GSS<\/a>\u00a0might remember, the family Vireonidae encompasses about 52 species of birds distributed throughout the tropical and temperate Americas.\u00a0\u00a0Vireonids are small- to medium-sized arboreal songbirds with a thick and slightly hooked bill.\u00a0\u00a0Many species are omnivorous with a predominantly greenish or yellowish plumage.\u00a0\u00a0The family has traditionally been divided into 4 genera:\u00a0\u00a0Peppershrikes (genus\u00a0<em>Cyclarhis<\/em>), Shrike-Vireos (<em>Vireolanius<\/em>), Vireos (<em>Vireo<\/em>), and Greenlets (<em>Hylophilus<\/em>).<\/p>\n\n\n\n<figure class=\"wp-block-image\"><a href=\"http:\/\/4.bp.blogspot.com\/-XDzjuD-kzgk\/VME_TqPRzsI\/AAAAAAAABBU\/HSxzwp-s5mw\/s1600\/Vireo_griseus.jpg\"><img decoding=\"async\" src=\"http:\/\/4.bp.blogspot.com\/-XDzjuD-kzgk\/VME_TqPRzsI\/AAAAAAAABBU\/HSxzwp-s5mw\/s1600\/Vireo_griseus.jpg\" alt=\"\"\/><\/a><\/figure>\n\n\n\n<p>With the exception of its starkly colored irides, the White-eyed Vireo (<em>Vireo griseus<\/em>) is a rather typical vireonid.&nbsp;&nbsp;It breeds in scrubby forest edge and understory in the eastern United States and northeastern Mexico and winters on the Gulf Coast and Caribbean Islands. \u00a9 David L. Slager, 6 May 2013, Lucas County, Ohio, USA.<\/p>\n\n\n\n<p>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Until now, the few molecular phylogenetic studies examining the history of Vireonidae have sampled only a small number of taxa, preventing detailed inference about the family&#8217;s evolutionary history.&nbsp;&nbsp;By contrast, we were able to sample mitochondrial and nuclear genes from 221 individuals representing 46 of 52 vireonid species, enabling us to break much new ground in understanding the evolutionary history of this important clade.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Among several key results we (including fellow biograd C.J. Battey!) recently&nbsp;<a href=\"http:\/\/dx.doi.org\/10.1016\/j.ympev.2014.07.021\">published<\/a>&nbsp;in&nbsp;<em>Molecular Phylogenetics and Evolution<\/em>&nbsp;was our finding that the New World Vireonidae is monophyletic group, consistent with a single colonization of the Americas from an Asian ancestor.&nbsp;&nbsp;We also found preliminary evidence for the existence of several cryptic species in the Neotropics and noted that tropical vireonids contain greater intraspecific genetic diversity on average than their temperate counterparts.&nbsp;&nbsp;This trend is consistent with data from other bird families, and suggests that regional taxonomic bias or biological processes such as higher tropical speciation rates may be driving the pattern.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Our phylogeny contradicted the traditional taxonomy of Vireonidae in important ways.&nbsp;&nbsp;Most notably, we found that the 15 greenlet species in the genus&nbsp;<em>Hylophilus<\/em>&nbsp;(<em>sensu lato<\/em>) are not closely related to each other but fall into 4 different clades.&nbsp;&nbsp;In an attempt to clean up this taxonomic mess, we published a follow-up&nbsp;<a href=\"http:\/\/dx.doi.org\/10.11646\/zootaxa.3884.2.8\">paper<\/a>&nbsp;in&nbsp;<em>Zootaxa<\/em>&nbsp;revising the genus-level taxonomy of the greenlets so that genera reflect monophyletic groups.&nbsp;&nbsp;We proposed keeping the pale-eyed, scrub-dwelling greenlets in&nbsp;<em>Hylophilus<\/em>,&nbsp;moving the dark-eyed, canopy-dwelling greenlets to the old genus&nbsp;<em>Pachysylvia<\/em>, moving Tepui Greenlet to&nbsp;<em>Vireo<\/em>, and transferring the unique understory-dwelling Tawny-crowned Greenlet into the new genus&nbsp;<em>Tunchiornis<\/em>.<\/p>\n\n\n\n<figure class=\"wp-block-image\"><a href=\"http:\/\/3.bp.blogspot.com\/-GDi6-UrDYlw\/VME_SSbaw9I\/AAAAAAAABBQ\/B9u3yNvkOaw\/s1600\/Hylophilus_semibrunneus.jpg\"><img decoding=\"async\" src=\"http:\/\/3.bp.blogspot.com\/-GDi6-UrDYlw\/VME_SSbaw9I\/AAAAAAAABBQ\/B9u3yNvkOaw\/s1600\/Hylophilus_semibrunneus.jpg\" alt=\"\"\/><\/a><\/figure>\n\n\n\n<p>The canopy-dwelling Rufous-naped Greenlet (<em>Hylophilus semibrunneus<\/em>) is a core member of mixed-species foraging flocks in subtropical forests of the northern Andes.&nbsp;&nbsp;Our revised taxonomy places it in the genus&nbsp;<em>Pachysylvia<\/em>&nbsp;to reflect the fact that it and other canopy-greenlets are only distantly related to the scrub- and understory-dwelling greenlets.&nbsp;\u00a9&nbsp;David L. Slager, 7 February 2011, Jeric\u00f3, Antioquia, Colombia.<br>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Switching topics away from vireos, a molecular phylogeny of the New World sparrows published in the Klicka lab in early 2014 showed that the American Tree Sparrow (<em>Spizella arborea<\/em>) is not related to the other species of&nbsp;<em>Spizella&nbsp;<\/em>sparrows, but rather represents its own lineage with a long, independent evolutionary history.&nbsp;&nbsp;In our&nbsp;<em>Zootaxa<\/em><a href=\"http:\/\/dx.doi.org\/10.11646\/zootaxa.3821.3.9\">paper<\/a>, we reviewed the taxonomic and phylogenetic placements of the American Tree Sparrow to date and described a new genus,&nbsp;<em>Spizelloides<\/em>, for the American Tree Sparrow to allow modern taxonomies to more closely reflect its evolutionary relationships.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;That&#8217;s all for now.&nbsp;&nbsp;You&#8217;ll have to come to GSS this spring to hear what&#8217;s up next!<br>&#8211;Dave<br>References<br>Slager, D.L., Battey, C.J., Bryson, R.W. Jr., Voelker, G. and J. Klicka. 2014.&nbsp;<a href=\"http:\/\/dx.doi.org\/10.1016\/j.ympev.2014.07.021\">A multilocus phylogeny of a major New World avian radiation: The Vireonidae<\/a>.&nbsp;<em>Molecular Phylogenetics and Evolution<\/em>&nbsp;80:95-104.<br>Slager, D.L. and J. Klicka. 2014a.&nbsp;<a href=\"http:\/\/dx.doi.org\/10.11646\/zootaxa.3821.3.9\">A new genus for the American Tree Sparrow (Aves: Passeriformes: Passerellidae)<\/a>.&nbsp;<em>Zootaxa<\/em>&nbsp;3821:398-400.<br>Slager, D.L. and J. Klicka. 2014b.&nbsp;<a href=\"http:\/\/dx.doi.org\/10.11646\/zootaxa.3884.2.8\">Polyphyly of&nbsp;<em>Hylophilus<\/em>&nbsp;and a new genus for the Tawny-crowned Greenlet (Aves: Passeriformes: Vireonidae)<\/a>.&nbsp;<em>Zootaxa<\/em>&nbsp;3884:194-196.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>As those who attended the Klicka lab talks at last year&#8217;s\u00a0GSS\u00a0might remember, the family Vireonidae<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"footnotes":""},"categories":[6,1],"tags":[],"ppma_author":[22],"class_list":["post-171","post","type-post","status-publish","format-standard","hentry","category-publications","category-scipos"],"authors":[{"term_id":22,"user_id":1,"is_guest":0,"slug":"scipos","display_name":"SciPos","avatar_url":{"url":"https:\/\/depts.washington.edu\/scipos\/wordpress\/wp-content\/uploads\/2022\/06\/0bb1f4cb5ff99dd034602ced0e2534fc.png","url2x":"https:\/\/depts.washington.edu\/scipos\/wordpress\/wp-content\/uploads\/2022\/06\/0bb1f4cb5ff99dd034602ced0e2534fc.png"},"author_category":"","user_url":"https:\/\/depts.washington.edu\/scipos\/wordpress\/","last_name":"","first_name":"","job_title":"","description":""}],"_links":{"self":[{"href":"https:\/\/depts.washington.edu\/scipos\/wordpress\/wp-json\/wp\/v2\/posts\/171","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/depts.washington.edu\/scipos\/wordpress\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/depts.washington.edu\/scipos\/wordpress\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/depts.washington.edu\/scipos\/wordpress\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/depts.washington.edu\/scipos\/wordpress\/wp-json\/wp\/v2\/comments?post=171"}],"version-history":[{"count":1,"href":"https:\/\/depts.washington.edu\/scipos\/wordpress\/wp-json\/wp\/v2\/posts\/171\/revisions"}],"predecessor-version":[{"id":172,"href":"https:\/\/depts.washington.edu\/scipos\/wordpress\/wp-json\/wp\/v2\/posts\/171\/revisions\/172"}],"wp:attachment":[{"href":"https:\/\/depts.washington.edu\/scipos\/wordpress\/wp-json\/wp\/v2\/media?parent=171"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/depts.washington.edu\/scipos\/wordpress\/wp-json\/wp\/v2\/categories?post=171"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/depts.washington.edu\/scipos\/wordpress\/wp-json\/wp\/v2\/tags?post=171"},{"taxonomy":"author","embeddable":true,"href":"https:\/\/depts.washington.edu\/scipos\/wordpress\/wp-json\/wp\/v2\/ppma_author?post=171"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}