|
Optimizing Sporulation
for Different S. cerevisiae Strain Backgrounds.
E. Brooks, S. Tom, E. Schwartz, S.L. Elrod and E.O. Shuster
University of California, Davis
Major Conclusions:
Standardized test protocols (temperature can be altered
to suit experiment):
Sporulation on plates:
Sporulation
in liquid:
Strains Name |
BR2171-3B |
BR2495 |
EB1501 |
NH39 |
NKY278 |
SE1200 |
SE1202 |
YPH274 |
Y55 |
Background |
Unknown |
Unknown |
S288c |
A364a |
SK1 |
AP1 |
W303 |
S288c |
Y55 |
Source |
Roeder lab |
Roeder lab |
Holm lab |
Hartwell lab |
Kleckner lab |
Byers lab |
Rothstein lab |
Heiter lab |
Haber lab |
Effect of temperature on sporulation
little/no effect |
cs (18 &/or 15C) |
ts (34.5C) |
cs & ts |
NKY278 (SK1) |
BR2171-3B |
EB1501 (S288c) |
BR2495 |
Pre-sporulation
conditions
Mediac |
KAC(%) |
dextrose(%) |
Yeast ext.(%) |
Peptone(%) |
YNB w/o aa(%) |
amino acids |
10% YEPD |
0.00 |
10.00 |
0.80 |
0.30 |
0.00 |
- |
1% YPA |
1.00 |
0.00 |
1.00 |
2.00 |
0.00 |
- |
2% YPA |
2.00 |
0.00 |
1.00 |
2.00 |
0.00 |
- |
MSAc |
2.00 |
0.00 |
0.00 |
0.00 |
0.67 |
a |
2% YEPD |
0.00 |
2.00 |
1.00 |
2.00 |
0.00 |
- |
PSP2 |
1.00 |
0.00 |
0.10 |
0.00 |
0.67 |
a |
SAcCa |
2.00 |
0.00 |
0.00 |
0.00 |
0.67 |
b |
6% YEPD |
0.00 |
6.00 |
1.00 |
2.00 |
0.00 |
- |
a- Media supplemented with 20mg/ml ade, ura, his, arg, met; 60mg/ml tyr, lys,; 80mg/ml
trp, leu, iso.
b- Media supplemented with 2% caseamino acids and 20mg/ml ade, his, trp, ura.
c- 2% agar added for plates.
Sporulation
conditions
Mediab |
KAC(%) |
dextrose(%) |
raffinose(%) |
Yeast ext. (%) |
amino acids |
SPM |
0.30 |
0.00 |
0.02 |
0.00 |
a |
2% KAc |
2.00 |
0.00 |
0.00 |
0.00 |
a |
1% KAc |
1.00 |
0.00 |
0.00 |
0.00 |
a |
CSH spo |
1.00 |
0.05 |
0.00 |
0.10 |
a |
SPO |
1.50 |
0.05 |
0.00 |
0.25 |
a |
0.3% KAc |
0.30 |
0.00 |
0.00 |
0.00 |
a |
SPO7 |
1.50 |
0.10 |
0.00 |
0.25 |
a |
SPO8 |
0.30 |
0.00 |
0.02 |
1.00 |
- |
a- Media supplemented with 10mg/ml of ade, arg, his, iso, leu, lys, met, phe,
thr, trp, ura, val.
b- 2% agar added for plates
Plates
|
"Best" |
"Consensus" |
|||
Strain |
Media |
%spo +/- SD |
6% YEPD/SPM |
2% YPA/1% KAc |
PSP/1% KAc |
BR2171-3B |
MSAc/2%KAc |
66.2 +/- 0.6 |
57.2 +/- 6.5 |
37.5 +/- 2.6 |
50.5 +/- 9.5 |
BR2495 |
MSAc/2%KAc |
71.5 +/- 2.2 |
50.8 +/- 5.0 |
26.8 +/- 15.4 |
68.2 +/- 3.4 |
EB1501 |
6% YEPD/1%KAc |
29.3 +/- 12.1 |
21.2 +/- 12.3 |
1.8 +/- 1.4 |
3.5 +/- 1.7 |
NH39 |
2% YPA/1%KAc |
23.4 +/- 7.3 |
8.5 +/- 5.6 |
23.4 +/-7.3 |
1.4 +/- 1.5 |
NKY278 |
6%YEPD/1%KAc |
95.8 +/- 1.4 |
83.0 +/- 3.8 |
54.6 +/- 2.6 |
65.8 +/- 7.5 |
SE1200 |
6%YEPD/SPM |
67.6 +/- 6.6 |
67.6 +/- 6.6 |
9.2 +/- 4.6 |
21.0 +/- 9.4 |
SE1202 |
2%YEPD/0.3%KAc |
58.2 +/- 2.2 |
56.6 +/-3.4 |
34.2 +/- 6.4 |
23.8 +/- 7.3 |
YPH274 |
1%YPA/SPM |
28.5 +/- 1.5 |
15.5 +/- 4.2 |
24.5 +/-13.1 |
12.0 +/- 1.4 |
Y55 |
6%YEPD/SPM |
98.3 +/- 1.8 |
98.3 +/- 1.8 |
91.0 +/- 5.3 |
97.2 +/- 0.6 |
Liquid
|
"Best" |
"Consensus" |
|||
Strain |
Media |
%spo +/- SD |
1%YPA/1%KAc |
6%YEPD/CSH SPO |
PSP2/1%KAc |
BR2171-3B |
1%YPA/CSH SPO |
72.5 +/- 2.8 |
55.8 +/- 7.4 |
62.3 +/- 9.5 |
15.0 |
BR2495 |
PSP2/1% KAc |
39.0 |
30.0 +/- 5.7 |
19.5 +/- 13.4 |
39.0 |
EB1501 |
1%YPA/1%KAc |
52.0 +/- 7.8 |
52.0 +/- 7.8 |
32.3 +/- 8.8 |
27 |
NH39 |
6%YEPD/CSH SPO |
28.0 +/- 3.5 |
12.0 +/- 2.1 |
28.0 +/- 3.5 |
0 |
NKY278 |
1%YPA/CSH SPO |
97.8 +/- 1.1 |
97.5 +/- 1.4 |
92.8 +/- 2.5 |
91 |
SE1200 |
1%YPA/1%KAc |
77.3 +/- 6.7 |
77.3 +/- 6.7 |
51.5 +/- 4.9 |
60.5 +/- 4.9 |
SE1202 |
1%YPA/1%KAc |
51.8 +/- 0.4 |
51.8 +/- 0.4 |
37.3 +/- 7.4 |
39.5 |
YPH274 |
PSP2/1%KAc |
44.5 |
32.8 +/- 3.9 |
23.8 +/- 1.8 |
44.5 |
Y55 |
1%YPA/1%KAc |
83.8 +/- 0.4 |
83.8 +/- 0.4 |
82.0 +/- 4.2 |
60.5 |