Difference between revisions of "Data Organization"
(Created page with "MRI: NLR_###_FL —Parent YYYYMMDD —Scan Date *.PAR —Raw data *.REC *.nii —Converted nifty images *MSE.nii.gz —Root mean squared image Anatomy: NLR_#...") |
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| − | + | In the server, the nomenclature for file naming is as follows. This will allow for ease in adapting to the naming structures within Freesurfer, but also will provide a stable system by which we can keep all of the longitudinal data organized and clear. | |
| − | NLR_###_FL —Parent | + | ==MRI== |
| − | YYYYMMDD —Scan Date | + | Within /mnt/diskArray/projects/MRI:<br> |
| − | *.PAR —Raw data | + | NLR_###_FL —Parent<br> |
| − | *.REC | + | YYYYMMDD —Scan Date<br> |
| − | *.nii —Converted nifty images | + | *.PAR —Raw data<br> |
| − | *MSE.nii.gz —Root mean squared image | + | *.REC<br> |
| + | *.nii —Converted nifty images<br> | ||
| + | *MSE.nii.gz —Root mean squared image<br> | ||
Anatomy: | Anatomy: | ||
Revision as of 21:48, 3 December 2015
In the server, the nomenclature for file naming is as follows. This will allow for ease in adapting to the naming structures within Freesurfer, but also will provide a stable system by which we can keep all of the longitudinal data organized and clear.
MRI
Within /mnt/diskArray/projects/MRI:
NLR_###_FL —Parent
YYYYMMDD —Scan Date
*.PAR —Raw data
*.REC
*.nii —Converted nifty images
*MSE.nii.gz —Root mean squared image
Anatomy:
NLR_###_FL —AC-PC aligned, longitudinal average t1_acpc.nii.gz NLR_###_FL_MR# —AC-PC aligned, individual scan t1_acpc.nii.gz
Freesurfer:
NLR_###_FL_MR# —Individual Segmentation NLR_###_FL_MR#.long.NLR_###_FL_MRbase —Longitudinal base comp for ea scan NLR_###_FL_MRbase —Base average segmentation qdec —Longitudinal data storage long.qdec.table.dat —data table
