Difference between revisions of "Data Organization"
From Brain Development & Education Lab Wiki
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Within /mnt/diskArray/projects/MRI:<br> | Within /mnt/diskArray/projects/MRI:<br> | ||
NLR_###_FL —Parent<br> | NLR_###_FL —Parent<br> | ||
| − | + | :YYYYMMDD:::—Scan Date<br> | |
| − | + | ::*.PAR:::—Raw data<br> | |
| − | + | ::*.REC<br> | |
| − | + | ::*.nii :::—Converted nifty images<br> | |
| − | + | ::*MSE.nii.gz:::—Root mean squared image<br> | |
Anatomy: | Anatomy: | ||
Revision as of 21:50, 3 December 2015
In the server, the nomenclature for file naming is as follows. This will allow for ease in adapting to the naming structures within Freesurfer, but also will provide a stable system by which we can keep all of the longitudinal data organized and clear.
MRI
Within /mnt/diskArray/projects/MRI:
NLR_###_FL —Parent
- YYYYMMDD:::—Scan Date
- .PAR:::—Raw data
- .REC
- .nii :::—Converted nifty images
- MSE.nii.gz:::—Root mean squared image
- .PAR:::—Raw data
Anatomy:
NLR_###_FL —AC-PC aligned, longitudinal average t1_acpc.nii.gz NLR_###_FL_MR# —AC-PC aligned, individual scan t1_acpc.nii.gz
Freesurfer:
NLR_###_FL_MR# —Individual Segmentation NLR_###_FL_MR#.long.NLR_###_FL_MRbase —Longitudinal base comp for ea scan NLR_###_FL_MRbase —Base average segmentation qdec —Longitudinal data storage long.qdec.table.dat —data table
