Difference between revisions of "HCP Process"

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This page will contain information about processing HCP data. This process has been entirely automated, with proper file management.
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Software to process HCP data through AFQ is available from https://github.com/yeatmanlab/BrainTools/tree/master/projects/HCP
  
 
==HCP Extension for AFQ==
 
==HCP Extension for AFQ==
Preprocessing of HCP diffusion data for AFQ has been fully automated. Output will increase the file directory size by approximately 50% (resulting in around 2 TB for the 900 subjects diffusion data) Read Matlab help documentation for further explanation
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Processing of HCP diffusion data through AFQ has been fully automated. Output will result in a file directory roughly twice as large  (resulting in around 2.5 TB for the 900 subjects diffusion data [3.6 TB if zipped files left on drive]).
HCP_run_dtiInit
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Fixes x flip of bvecs and rounds small bvals (<10) to 0 to comply with dtiInit.
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==AFQ for HCP==
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HCP_run_dtiInit
Instruction forthcoming...
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Latest revision as of 21:04, 29 March 2016

Software to process HCP data through AFQ is available from https://github.com/yeatmanlab/BrainTools/tree/master/projects/HCP

HCP Extension for AFQ

Processing of HCP diffusion data through AFQ has been fully automated. Output will result in a file directory roughly twice as large (resulting in around 2.5 TB for the 900 subjects diffusion data [3.6 TB if zipped files left on drive]).

HCP_run_dtiInit