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School of MedicineUniversity of Washington • Box 357735 • 1705 NE Pacific St • Seattle WA 98195
   
  About Jake McKinlay  

Jake McKinlay James "Jake" McKinlay
Postdoctoral Fellow

Email:
mckinla1@uw.edu

Phone:
(206) 221-2850

Location:
HSB K-359

Mailing Address:
UW Box 357242
Seattle WA 98195

Shipping Address:
HSB K-359
1708 NE Pacific St
Seattle WA 98195

  Research  
 

Ph.D. in Microbiology and Molecular Genetics
Michigan State University
Mentors: Claire Vieille and J. Gregory Zeikus
Project: 13C-metabolic flux analysis and genome annotation of succinate-producing Actinobacillus succinogenes.

Professional M.Sc. in Industrial Microbiology
Michigan State University
Mentor: J. Gregory Zeikus
Project: Neutral red-mediated iron reduction by Escherichia coli with implications for microbial fuel cells and fortuitous metal reduction in nature.
Internship: Pfizer Global Research and Development
                                   
B.Sc. with Honors in Environmental Microbiology
University of British Columbia
Mentor: William Mohn
Project: Active transport of biphenyl by bacteria that degrade polychlorinated biphenyl pollutants.

Interests:  Applied and fundamental aspects of microbial metabolism

Doodles: https://www.msu.edu/~mckinla1/index.html or Google ‘Art Jakeo’

 

 

 

 

   

I study the metabolism that drives photosynthetic H2 production by Rhodopseudomonas palustris. H2 is currently used in various industries and is receiving increasing attention as a clean-burning fuel. Most H2 we use as a society is derived from fossil fuels. However, H2 can be produced biologically from renewable resources using organisms like R. palustris. R. palustris obtains energy from photosynthesis and electrons from organic (and some inorganic) waste to produce H2 via nitrogenase. A disadvantage of producing H2 via nitrogenase is that it is repressed by ammonia, which is found in feedstocks for biological H2 production. Fortunately, we have created mutants that produce H2 even in the presence on ammonia. I compared one of these mutants to the wild-type strain using 13C-metabolic flux analysis and transcriptional approaches to identify metabolic pathways that affect H2 production. I then used the resulting information to engineer a strain with higher H2 yields. Currently, I am characterizing the metabolism and physiology of non-growing R. palustris cells where the highest H2 yields are observed.

Related publications:

  1. McKinlay, JB and CS Harwood. 2010. Carbon dioxide fixation as a central redox cofactor recycling mechanism in bacteria. Proceedings of the National Academy of Sciences USA. 107 (26): 11669-11675.
  2. McKinlay, JB and CS Harwood. 2010. Mini-review. Photobiological production of hydrogen gas as a biofuel. Current Opinion in Biotechnology. 21 (3): 244-251.
  3. Huang, JJ, EK Heiniger, JB McKinlay, and CS Harwood. 2010. Production of hydrogen gas from light and the inorganic electron donor thiosulfate by Rhodopseudomonas palustris. Applied and Environmental Microbiology. 76 (23): 7717-7722.