Calendar
Classes meet Thursdays and Fridays 10:00 - 11:20 am
Q/A and Office Hour with Prof on Thursdays 11:20 - 12:00 pm
Labs meet Fridays 11:30-2:20 pm and lab assignments are due at the beginning of lab
All classes and labs are in person
| Week | Date | Lecture | Lab |
|---|---|---|---|
| 1 | 1/8 | L1: Introduction, Housekeeping, and Protein Structure | Lab 1:Intro (due 1/15 at 9 PM) |
| 1/9 | L2: Homology Modeling and Intro to First Lab | ||
| 2 | 1/15 | L3: Protein Structure | Lab 2 (due 1/22 at 9 PM) |
| 1/16 | L4: Structure, Forces and Molecular Mechanics | ||
| 3 | 1/22 | L5: Molecular Dynamics | Lab 3 (due 1/29 at 9 PM) |
| 1/23 | L6: Coarse grain modeling with Rosetta | ||
| 4 | 1/29 | L7: Rules for Design 1 | Lab 4 (due 2/5 at 9 PM) |
| 1/30 | L8: Rules for Design 2 | ||
| 5 | 2/5 | L9: Rules for Design 3 | Lab 5 (due 2/12 at 9 PM) |
| 2/6 | L10: Rules for Design 4 | ||
| 6 | 2/12 | L11: Design Examples 1 | Start your Independent Project |
| 2/13 | L12: Design Examples 2 | >||
| 7 | 2/19 | Literature Review | Work on your Independent Project |
| 2/20 | Literature Review | >||
| 8 | 2/26 | L13: Design Examples 3 | >Work on Your Independent Project |
| 2/27 | L14: Design Examples 4 | >||
| 9 | 3/5 | L15: Design Examples 5 | >Work really hard on your project |
| 3/6 | L16: Design Examples 6 | ||
| 10 | 3/12 | 588 Presentations | Keep Working Really Hard on Your Project |
| 3/13 | 588 Presentations | ||
| 3/20/26 | Project Writeups: Writeups due on or before Friday 3/20/26 at 9 pm. Email PDF of your writeup to DAGGETT at uw AND to mcc7fb at uw |
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