Calendar
Classes meet Thursdays and Fridays 10:00 - 11:20 am
Q/A and Office Hour with Prof on Thursdays 11:20 - 12:00 pm
Labs meet Fridays 11:30-2:20 pm and lab assignments are due at the beginning of lab
All classes and labs are in person
| Week | Date | Lecture | Lab |
|---|---|---|---|
| 1 | 1/9 | L1: Introduction, Housekeeping, and Protein Structure | Lab 1:Intro (due 1/17 at beginning of lab) |
| 1/10 | L2: Homology Modeling and Intro to First Lab | ||
| 2 | 1/16 | L3: Protein Structure and Rosetta | Lab 2 (due 1/24, beginning of lab) |
| 1/17 | L4: Structure, Forces and Molecular Mechanics | ||
| 3 | 1/23 | L5: Molecular Dynamics | Lab 3 (due 1/31, beginning of lab) |
| 1/24 | L6: Coarse grain modeling with Rosetta | ||
| 4 | 1/30 | L7: Rules for Design 1 | Lab 4 (due 2/7, beginning of lab) |
| 1/31 | L8: Rules for Design 2 | ||
| 5 | 2/6 | L9: Rules for Design 3 | Lab 5 (due 2/14, beginning of lab) |
| 2/7 | L10: Rules for Design 4 | ||
| 6 | 2/13 | L11: Design Examples 1 | Final Lab Writeups Due 2/14 by 11:59 PM Start Project |
| 2/14 | L12: Design Examples 2 | >||
| 7 | 2/20 | Literature Review | Work on your Independent Project |
| 2/21 | Literature Review | >||
| 8 | 2/27 | L13: Design Examples 3 | >Work on Your Independent Project |
| 2/28 | L14: Design Examples 4 | >||
| 9 | 3/6 | L15: Design Examples 5 | >Work really hard on your project |
| 3/6 | L16: Design Examples 6 | ||
| 10 | 3/13 | 588 Presentations | Keep Working Really Hard on Your Project |
| 3/14 | 588 Presentations | ||
| 3/21/25 | Project Writeups: Writeups due on or before Friday 3/21/25 at 5 pm. Email PDF of your writeup to DAGGETT at uw AND to mcc7fb at uw |
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