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data_organization
Table of Contents
In the server, the nomenclature for file naming is as follows. This will allow for ease in adapting to the naming structures within Freesurfer, but also will provide a stable system by which we can keep all of the longitudinal data organized and clear.
MRI
Within /mnt/diskArray/projects/MRI:
- NLR_###_FL—Parent
- YYYYMMDD—Scan Date
- *.PAR—Header
- *.REC—Image file
- *.nii—Converted nifty images
- *MSE.nii.gz—Root mean squared image
Anatomy
Within /mnt/diskArray/projects/anatomy:
- NLR_###_FL
- t1_acpc.nii.gz—AC-PC aligned, longitudinal average
- NLR_###_FL_MR#
- t1_acpc.nii.gz—AC-PC aligned, individual scan
Freesurfer
Within /mnt/diskArray/projects/freesurfer:
- NLR_###_FL_MR#—Individual Segmentation
- NLR_###_FL_MR#.long.NLR_###_FL_MRbase—Longitudinal base comp for ea scan
- NLR_###_FL_MRbase—Base average segmentation
- qdec—Longitudinal data storage
- long.qdec.table.dat—data table
data_organization.txt · Last modified: 2016/08/17 21:09 by bdelab
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