Skip to content

Biomarkers, Prevention and Interventions for HIV-associated Malignancies and NCDs Core

The Biomarkers, Prevention and Interventions for HIV-associated Malignancies and NCDs (BPIN) provides high-dimensional data, biospecimens, and state-of-the-art tools for novel studies of cancer and other NCDs among persons living with HIV (PLWH).

Cancer and other non-communicable diseases are the leading cause of death among persons living with HIV (PLWH) worldwide. Infection with HIV significantly increases the risk of a host of non-communicable diseases (NCDs) including cancer, cardiovascular disease, and pulmonary disease. In the era of widespread availability of antiretroviral therapy, with the increased life expectancy of PLWH, the incidence of NCDs has increased and now is the leading cause of death. Unfortunately, substantial gaps remain in understanding how HIV-infection potentiates the development of NCDs, how to best prevent the development of the chronic complications of HIV infection, and how NCDs are optimally treated in PLHW. New strategies are needed and will require careful translational, clinical, and epidemiologic investigations. This Core will strengthen research in our local and global HIV communities through 3 specific aims. 

1: Support new and established researchers in the fields of cancer and other NCD with consultation and research instruments to design and implement impactful epidemiologic, clinical, and translational studies to elucidate pathogenesis and identify optimal methods to prevent and treat cancer and other NCDs among PLWH 

2: Collect and disseminate high-dimension data and biospecimens from PLWH with or at risk for cancer and other NCDs to CFAR investigators who seek to conduct basic and translational studies 

3: Develop and distribute state-of-the-art tools for novel studies of cancer and other NCDs among PLWH, including image analysis, histopathology, and molecular diagnostic assays 

Biorepositories containing deidentified biospecimens (plasma, serum, urine, and PBMCs) linked to extensive clinical, immunologic, and cardiovascular imaging phenotyping

Please contact Manoj Menon for more information.

Assays for Detection and Quantification of Tumor Viruses
  • PCR assays to detect and quantify tumor viruses (i.e KSHV, EBV, HPV) 

Please contact Manoj Menon for more information.

Assays to Interrogate the Tumor Environment
  • Immunohistochemical arrays and gene expression analysis (e.g. PD-1, WT-1, p53, Rb, p16 and other well-characterized tumor markers) that may inform response characteristics.  
  • Genomic Analyses  

Please contact Manoj Menon for more information.

Radiographic Image Analysis
  • Novel and comprehensive quantitative CT analyses  
  • echocardiograms, coronary calcium scores, and coronary CT angiograms for cardiovascular disease investigations.  

Please contact Manoj Menon for more information.

Consultation
  • Economic evaluations (facility costing surveys, time-and-motion studies, personal out of pocket cost surveys),  
  • Social network data (trust and communication ties between patients and providers) 
  • Clinical outcomes data  
  • Clinical trials 
  • Implementation outcomes 

Please contact Manoj Menon for more information.

The BPIN Core continues to cultivate research in the Seattle biomedical community through the provision of assistance with lab assay development, consultation, and data tools. Additionally, the number of researchers within this field is growing with many of our junior investigators and next generation leaders initiating independent research careers in the field of HIVAM with the support of UW/Fred Hutch CFAR. Further, the NIH funding base for research in HIVAM has grown to over $15 million, and several grants, including K23s, R21s, R01s, P01s, and U54s have been awarded to HIVAM members, furthering CFAR’s mission of adding value to the local research community.

Director
Manoj Menon, MD, MPH
mmenon@fredhutch.org

Associate Director
Warren Phipps, MD, MPH
wtphipps@fredhutch.org

Core Manager
TBD